4.0:Information of module
Elevated CO2 expanding leaf
In comparison with seed germinating in countinuous light 24h SL help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009627 systemic acquired resistance BP 5.900e-06
GO:0009814 defense response, incompatible interacti... BP 1.248e-05
GO:0045087 innate immune response BP 3.708e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009451 RNA modification BP 4.918e-27
GO:0001510 RNA methylation BP 4.375e-26
GO:0032259 methylation BP 8.267e-22
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Elevated CO2 expanding leaf		 Log2 signal ratio
seed germinating in countinuous light 24h SL
1 248332_at AT5G52640 ATHS83, AtHsp90-1, HEAT SHOCK PROTEIN 90-1, ATHSP90.1, heat shock protein 90.1, HSP81-1, HEAT SHOCK PROTEIN 81-1, HSP81.1, HSP83, HEAT SHOCK PROTEIN 83, HSP90.1, heat shock protein 90.1 0.334 0.567
2 257466_at AT1G62840 unknown 0.251 -0.748
3 254571_at AT4G19370 unknown 0.181 -0.770
4 258201_at AT3G13910 unknown 0.171 0.918
5 257774_at AT3G29250 AtSDR4, SDR4, short-chain dehydrogenase reductase 4 0.169 0.405
6 264223_s_at AT3G16030 CES101, CALLUS EXPRESSION OF RBCS 101, RFO3, RESISTANCE TO FUSARIUM OXYSPORUM 3 0.166 -1.079
7 258063_at AT3G14620 CYP72A8, cytochrome P450, family 72, subfamily A, polypeptide 8 0.162 -0.275
8 258100_at AT3G23550 [MATE efflux family protein] 0.152 -0.557
9 253842_at AT4G27860 MEB1, MEMBRANE OF ER BODY 1 0.148 0.339
10 259598_at AT1G27980 ATDPL1, DPL1, dihydrosphingosine phosphate lyase 0.145 0.184
11 252200_at AT3G50280 [HXXXD-type acyl-transferase family protein] 0.144 -1.210
12 256425_at AT1G33560 ADR1, ACTIVATED DISEASE RESISTANCE 1 0.140 1.153
13 250775_at AT5G05460 AtENGase85A, ENGase85A, Endo-beta-N-acetyglucosaminidase 85A 0.136 0.450
14 254153_at AT4G24450 ATGWD2, GWD3, PWD, phosphoglucan, water dikinase 0.134 0.320
15 257432_at AT2G21850 [Cysteine/Histidine-rich C1 domain family protein] 0.134 0.324
16 259169_at AT3G03520 NPC3, non-specific phospholipase C3 0.132 0.260
17 257928_at AT3G16890 PPR40, pentatricopeptide (PPR) domain protein 40 0.131 0.227
18 252539_at AT3G45730 unknown 0.127 -1.435
19 265132_at AT1G23830 unknown 0.126 -0.449
20 247570_at AT5G61250 AtGUS1, glucuronidase 1, GUS1, glucuronidase 1 0.125 0.105
21 248092_at AT5G55170 ATSUMO3, SUM3, SMALL UBIQUITIN-LIKE MODIFIER 3, SUMO 3, SMALL UBIQUITIN-LIKE MODIFIER 3, SUMO3, small ubiquitin-like modifier 3 0.123 -0.905
22 267538_at AT2G41870 [Remorin family protein] 0.123 -0.311
23 261125_at AT1G04990 [Zinc finger C-x8-C-x5-C-x3-H type family protein] 0.122 -0.117
24 260991_at AT1G12160 [Flavin-binding monooxygenase family protein] 0.121 0.107
25 258894_at AT3G05650 AtRLP32, receptor like protein 32, RLP32, receptor like protein 32 0.119 -0.804
26 254281_at AT4G22840 [Sodium Bile acid symporter family] 0.116 0.466
27 252217_at AT3G50140 unknown 0.115 -0.786
28 246133_at AT5G20960 AAO1, aldehyde oxidase 1, AO1, aldehyde oxidase 1, AOalpha, aldehyde oxidase alpha, AT-AO1, ARABIDOPSIS THALIANA ALDEHYDE OXIDASE 1, ATAO, AtAO1, Arabidopsis thaliana aldehyde oxidase 1 0.114 0.254
29 264998_at AT1G67330 unknown 0.113 0.894
30 245775_at AT1G30270 ATCIPK23, CIPK23, CBL-interacting protein kinase 23, LKS1, LOW-K+-SENSITIVE 1, PKS17, SOS2-like protein kinase 17, SnRK3.23, SNF1-RELATED PROTEIN KINASE 3.23 0.113 0.661
31 266320_at AT2G46640 TAC1, Tiller Angle Control 1 0.110 0.036
32 254752_at AT4G13160 unknown 0.110 0.210
33 248657_at AT5G48570 ATFKBP65, FKBP65, ROF2 0.109 0.417
34 256583_at AT3G28850 [Glutaredoxin family protein] 0.109 -0.191
35 263096_at AT2G16060 AHB1, hemoglobin 1, ARATH GLB1, ATGLB1, GLB1, CLASS I HEMOGLOBIN, HB1, hemoglobin 1, NSHB1 0.108 1.428
36 248134_at AT5G54860 [Major facilitator superfamily protein] 0.106 -0.188
37 250697_at AT5G06800 [myb-like HTH transcriptional regulator family protein] 0.105 -0.650
38 250881_at AT5G04080 unknown 0.105 -0.791
39 246620_at AT5G36220 CYP81D1, cytochrome P450, family 81, subfamily D, polypeptide 1, CYP91A1, CYTOCHROME P450 91A1 0.104 -0.704
40 252095_at AT3G51000 [alpha/beta-Hydrolases superfamily protein] 0.102 0.489
41 266555_at AT2G46270 GBF3, G-box binding factor 3 0.100 -0.142
42 250092_at AT5G17360 unknown 0.099 -0.493
43 263067_at AT2G17550 TRM26, TON1 Recruiting Motif 26 0.096 -0.857
44 256664_at AT3G12040 [DNA-3-methyladenine glycosylase (MAG)] 0.096 -0.102
45 262318_at AT1G27620 [HXXXD-type acyl-transferase family protein] 0.096 -1.032
46 259472_at AT1G18910 [zinc ion binding] 0.094 -0.630
47 256489_at AT1G31550 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.094 -0.993
48 259346_at AT3G03910 glutamate dehydrogenase 3 0.093 -0.157
49 253987_at AT4G26270 PFK3, phosphofructokinase 3 0.089 0.324
50 259685_at AT1G63090 AtPP2-A11, phloem protein 2-A11, PP2-A11, phloem protein 2-A11 0.088 0.248
51 267459_at AT2G33850 unknown -0.386 -1.190
52 263979_at AT2G42840 PDF1, protodermal factor 1 -0.284 1.396
53 258675_at AT3G08770 LTP6, lipid transfer protein 6 -0.243 0.984
54 249895_at AT5G22500 FAR1, fatty acid reductase 1 -0.233 0.265
55 255675_at AT4G00480 ATMYC1, myc1 -0.202 0.693
56 254639_at AT4G18750 DOT4, DEFECTIVELY ORGANIZED TRIBUTARIES 4 -0.199 0.448
57 263480_at AT2G04032 ZIP7, zinc transporter 7 precursor -0.198 0.195
58 247463_at AT5G62210 [Embryo-specific protein 3, (ATS3)] -0.187 -0.682
59 246565_at AT5G15530 BCCP2, biotin carboxyl carrier protein 2, CAC1-B -0.187 0.943
60 257663_at AT3G20260 [FUNCTIONS IN: structural constituent of ribosome] -0.184 1.189
61 253514_at AT4G31805 POLAR, POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION -0.175 0.069
62 251394_at AT3G60900 FLA10, FASCICLIN-like arabinogalactan-protein 10 -0.172 0.022
63 249215_at AT5G42800 DFR, dihydroflavonol 4-reductase, M318, TT3 -0.172 -0.657
64 260806_at AT1G78260 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.157 0.376
65 249977_at AT5G18820 Cpn60alpha2, chaperonin-60alpha2, EMB3007, embryo defective 3007 -0.155 -0.224
66 260727_at AT1G48100 [Pectin lyase-like superfamily protein] -0.152 -0.864
67 256192_at AT1G30110 ATNUDX25, nudix hydrolase homolog 25, NUDX25, nudix hydrolase homolog 25 -0.149 -0.225
68 265154_at AT1G30960 [GTP-binding family protein] -0.145 0.045
69 256985_at AT3G13540 ATMYB5, myb domain protein 5, MYB5, myb domain protein 5 -0.145 -0.999
70 246063_at AT5G19340 unknown -0.145 0.689
71 245624_at AT4G14090 [UDP-Glycosyltransferase superfamily protein] -0.144 -0.231
72 259714_at AT1G60980 ATGA20OX4, gibberellin 20-oxidase 4, GA20OX4, gibberellin 20-oxidase 4 -0.144 0.042
73 263441_at AT2G28620 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.144 -0.950
74 261636_at AT1G50110 [D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein] -0.143 -0.223
75 250891_at AT5G04530 KCS19, 3-ketoacyl-CoA synthase 19 -0.142 0.042
76 246535_at AT5G15900 TBL19, TRICHOME BIREFRINGENCE-LIKE 19 -0.141 0.306
77 253285_at AT4G34250 KCS16, 3-ketoacyl-CoA synthase 16 -0.137 0.695
78 252305_at AT3G49240 emb1796, embryo defective 1796 -0.134 0.678
79 249060_at AT5G44560 VPS2.2 -0.133 0.978
80 261384_at AT1G05440 [C-8 sterol isomerases] -0.130 -0.470
81 251826_at AT3G55110 ABCG18, ATP-binding cassette G18 -0.130 -0.280
82 258067_at AT3G25980 AtMAD2, MAD2, MITOTIC ARREST-DEFICIENT 2 -0.129 -0.525
83 262016_at AT1G35513 -0.128 -0.567
84 257134_at AT3G12870 unknown -0.125 0.253
85 265531_at AT2G06200 AtGRF6, growth-regulating factor 6, GRF6, growth-regulating factor 6 -0.121 -1.058
86 262801_at AT1G21010 unknown -0.121 0.154
87 257005_at AT3G14190 CMR1, COPPER MODIFIED RESISTANCE 1 -0.121 0.078
88 251791_at AT3G55500 ATEXP16, ATEXPA16, expansin A16, ATHEXP ALPHA 1.7, EXP16, EXPANSIN 16, EXPA16, expansin A16 -0.121 -0.341
89 252808_at AT3G42420 [pseudogene] -0.116 -0.912
90 246282_at AT4G36580 [AAA-type ATPase family protein] -0.116 0.636
91 262546_at AT1G31260 ZIP10, zinc transporter 10 precursor -0.114 -0.773
92 255265_at AT4G05190 ATK5, kinesin 5 -0.114 0.658
93 263150_at AT1G54050 [HSP20-like chaperones superfamily protein] -0.114 0.259
94 253064_at AT4G37730 AtbZIP7, basic leucine-zipper 7, bZIP7, basic leucine-zipper 7 -0.112 -1.097
95 246687_at AT5G33370 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.110 0.349
96 267552_at AT2G32770 ATPAP13, PURPLE ACID PHOSPHATASE 13, PAP13, purple acid phosphatase 13 -0.109 -1.103
97 261323_at AT1G44760 [Adenine nucleotide alpha hydrolases-like superfamily protein] -0.109 -0.207
98 247612_at AT5G60730 [Anion-transporting ATPase] -0.108 -0.269
99 265555_at AT2G07500 [Mutator-like transposase family, has a 1.9e-70 P-value blast match to Q9SJR8 /172-333 Pfam PF03108 MuDR family transposase (MuDr-element domain)] -0.107 -0.448