4.0:Information of module
FLIGHT TAGESB plate6 ROOTS
In comparison with Elevated CO2 AMPLE N DAY help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010200 response to chitin BP 7.827e-74
GO:0010243 response to organonitrogen compound BP 1.129e-72
GO:1901698 response to nitrogen compound BP 1.888e-55
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0001666 response to hypoxia BP 4.130e-08
GO:0036293 response to decreased oxygen levels BP 5.528e-08
GO:0070482 response to oxygen levels BP 7.339e-08
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
FLIGHT TAGESB plate6 ROOTS		 Log2 signal ratio
Elevated CO2 AMPLE N DAY
1 255937_at AT1G12610 DDF1, DWARF AND DELAYED FLOWERING 1 0.751 -0.008
2 249197_at AT5G42380 CML37, calmodulin like 37 0.710 0.152
3 256009_at AT1G19210 [Integrase-type DNA-binding superfamily protein] 0.661 -0.011
4 247789_at AT5G58680 [ARM repeat superfamily protein] 0.554 -0.013
5 248322_at AT5G52760 [Copper transport protein family] 0.477 0.234
6 245755_at AT1G35210 unknown 0.453 0.181
7 253632_at AT4G30430 TET9, tetraspanin9 0.445 0.010
8 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 0.443 0.283
9 266545_at AT2G35290 SAUR79, SMALL AUXIN UPREGULATED RNA 79 0.441 0.109
10 260744_at AT1G15010 unknown 0.425 0.135
11 245346_at AT4G17090 AtBAM3, BAM3, BETA-AMYLASE 3, BMY8, BETA-AMYLASE 8, CT-BMY, chloroplast beta-amylase 0.421 -0.010
12 257919_at AT3G23250 ATMYB15, MYB DOMAIN PROTEIN 15, ATY19, MYB15, myb domain protein 15 0.399 0.177
13 260227_at AT1G74450 unknown 0.390 0.043
14 245119_at AT2G41640 [Glycosyltransferase family 61 protein] 0.384 0.153
15 260135_at AT1G66400 CML23, calmodulin like 23 0.373 0.125
16 251774_at AT3G55840 [Hs1pro-1 protein] 0.370 0.082
17 262382_at AT1G72920 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.366 0.090
18 245840_at AT1G58420 [Uncharacterised conserved protein UCP031279] 0.362 0.287
19 250781_at AT5G05410 DREB2, DEHYDRATION-RESPONSIVE ELEMENT BINDING PROTEIN 2, DREB2A, DRE-binding protein 2A 0.350 -0.074
20 249928_at AT5G22250 AtCAF1b, CCR4- associated factor 1b, CAF1b, CCR4- associated factor 1b 0.348 0.162
21 263783_at AT2G46400 ATWRKY46, WRKY DNA-BINDING PROTEIN 46, WRKY46, WRKY DNA-binding protein 46 0.341 0.178
22 260581_at AT2G47190 ATMYB2, MYB DOMAIN PROTEIN 2, MYB2, myb domain protein 2 0.338 0.127
23 246777_at AT5G27420 ATL31, Arabidopsis toxicos en levadura 31, CNI1, carbon/nitrogen insensitive 1 0.337 0.253
24 252679_at AT3G44260 AtCAF1a, CCR4- associated factor 1a, CAF1a, CCR4- associated factor 1a 0.333 0.244
25 259729_at AT1G77640 [Integrase-type DNA-binding superfamily protein] 0.333 0.065
26 255844_at AT2G33580 LYK5, LysM-containing receptor-like kinase 5 0.323 0.157
27 245777_at AT1G73540 atnudt21, nudix hydrolase homolog 21, NUDT21, nudix hydrolase homolog 21 0.322 0.085
28 249890_at AT5G22570 ATWRKY38, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 38, WRKY38, WRKY DNA-binding protein 38 0.316 0.495
29 248821_at AT5G47070 [Protein kinase superfamily protein] 0.312 0.130
30 248794_at AT5G47220 ATERF-2, ETHYLENE RESPONSE FACTOR- 2, ATERF2, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2, ERF2, ethylene responsive element binding factor 2 0.309 0.102
31 247848_at AT5G58120 [Disease resistance protein (TIR-NBS-LRR class) family] 0.305 -0.030
32 247925_at AT5G57560 TCH4, Touch 4, XTH22, xyloglucan endotransglucosylase/hydrolase 22 0.297 0.015
33 256633_at AT3G28340 GATL10, galacturonosyltransferase-like 10, GolS8, galactinol synthase 8 0.296 0.216
34 261443_at AT1G28480 GRX480, roxy19 0.292 0.309
35 254042_at AT4G25810 XTH23, xyloglucan endotransglucosylase/hydrolase 23, XTR6, xyloglucan endotransglycosylase 6 0.292 0.026
36 263576_at AT2G17080 unknown 0.291 -0.045
37 267263_at AT2G23110 [Late embryogenesis abundant protein, group 6] 0.290 -0.058
38 251336_at AT3G61190 BAP1, BON association protein 1 0.285 0.312
39 252193_at AT3G50060 MYB77, myb domain protein 77 0.284 0.070
40 252131_at AT3G50930 BCS1, cytochrome BC1 synthesis 0.282 0.276
41 261033_at AT1G17380 JAZ5, jasmonate-zim-domain protein 5, TIFY11A 0.280 0.157
42 249746_at AT5G24590 ANAC091, Arabidopsis NAC domain containing protein 91, TIP, TCV-interacting protein 0.278 0.037
43 266037_at AT2G05940 RIPK, RPM1-induced protein kinase 0.276 0.025
44 248611_at AT5G49520 ATWRKY48, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 48, WRKY48, WRKY DNA-binding protein 48 0.274 0.084
45 251259_at AT3G62260 [Protein phosphatase 2C family protein] 0.273 0.002
46 251745_at AT3G55980 ATSZF1, SZF1, salt-inducible zinc finger 1 0.273 0.051
47 265732_at AT2G01300 unknown 0.272 0.040
48 247913_at AT5G57510 unknown 0.272 0.019
49 245757_at AT1G35140 EXL1, EXORDIUM like 1, PHI-1, PHOSPHATE-INDUCED 1 0.271 0.051
50 262229_at AT1G68620 [alpha/beta-Hydrolases superfamily protein] 0.271 0.183
51 248964_at AT5G45340 CYP707A3, cytochrome P450, family 707, subfamily A, polypeptide 3 0.271 0.114
52 246018_at AT5G10695 unknown 0.268 0.224
53 254550_at AT4G19690 ATIRT1, ARABIDOPSIS IRON-REGULATED TRANSPORTER 1, IRT1, iron-regulated transporter 1 -0.411 -0.002
54 264014_at AT2G21210 SAUR6, SMALL AUXIN UPREGULATED RNA 6 -0.383 -0.076
55 261157_at AT1G34510 [Peroxidase superfamily protein] -0.373 0.006
56 254107_at AT4G25220 AtG3Pp2, glycerol-3-phosphate permease 2, G3Pp2, glycerol-3-phosphate permease 2, RHS15, root hair specific 15 -0.306 -0.036
57 262412_at AT1G34760 GF14 OMICRON, GRF11, general regulatory factor 11, RHS5, ROOT HAIR SPECIFIC 5 -0.296 -0.031
58 263295_at AT2G14210 AGL44, AGAMOUS-like 44, ANR1, ARABIDOPSIS NITRATE REGULATED 1 -0.278 -0.003
59 247797_at AT5G58780 AtcPT5, AtHEPS, cPT5, cis -prenyltransferase 5, HEPS, heptaprenyl diphosphate synthase -0.275 0.001
60 264846_at AT2G17850 [Rhodanese/Cell cycle control phosphatase superfamily protein] -0.251 0.060
61 258321_at AT3G22840 ELIP, ELIP1, EARLY LIGHT-INDUCABLE PROTEIN -0.227 -0.070
62 246872_at AT5G26080 [proline-rich family protein] -0.223 -0.052
63 247483_at AT5G62420 [NAD(P)-linked oxidoreductase superfamily protein] -0.214 -0.068
64 256097_at AT1G13670 unknown -0.203 -0.012
65 255140_x_at AT4G08410 [Proline-rich extensin-like family protein] -0.200 -0.036
66 253910_at AT4G27290 [S-locus lectin protein kinase family protein] -0.198 -0.008
67 255111_at AT4G08780 [Peroxidase superfamily protein] -0.192 0.098
68 248977_at AT5G45020 [Glutathione S-transferase family protein] -0.190 -0.020
69 252882_at AT4G39675 unknown -0.189 0.201
70 256176_at AT1G51640 ATEXO70G2, exocyst subunit exo70 family protein G2, EXO70G2, exocyst subunit exo70 family protein G2 -0.189 -0.014
71 253298_at AT4G33560 [Wound-responsive family protein] -0.185 -0.019
72 253880_at AT4G27590 [Heavy metal transport/detoxification superfamily protein ] -0.181 -0.047
73 248286_at AT5G52870 MAKR5, MEMBRANE-ASSOCIATED KINASE REGULATOR 5 -0.178 -0.048
74 252232_at AT3G49760 AtbZIP5, basic leucine-zipper 5, bZIP5, basic leucine-zipper 5 -0.177 -0.062
75 251335_at AT3G61400 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.176 -0.038
76 250640_at AT5G07150 [Leucine-rich repeat protein kinase family protein] -0.175 -0.008
77 258349_at AT3G17609 HYH, HY5-homolog -0.171 -0.071
78 252429_at AT3G47500 CDF3, cycling DOF factor 3 -0.171 -0.031
79 253502_at AT4G31940 CYP82C4, cytochrome P450, family 82, subfamily C, polypeptide 4 -0.169 -0.030
80 246884_at AT5G26220 AtGGCT2;1, GGCT2;1, gamma-glutamyl cyclotransferase 2;1 -0.169 0.057
81 247228_at AT5G65140 TPPJ, trehalose-6-phosphate phosphatase J -0.166 -0.269
82 266273_at AT2G29410 ATMTPB1, MTPB1, metal tolerance protein B1 -0.165 -0.126
83 252010_at AT3G52740 unknown -0.165 -0.035
84 254240_at AT4G23496 SP1L5, SPIRAL1-like5 -0.162 0.023
85 261247_at AT1G20070 unknown -0.161 -0.125
86 249138_at AT5G43070 WPP1, WPP domain protein 1 -0.161 -0.078
87 253416_at AT4G33070 AtPDC1, PDC1, pyruvate decarboxylase 1 -0.160 0.001
88 251727_at AT3G56290 unknown -0.157 -0.046
89 251293_at AT3G61930 unknown -0.152 0.014
90 258770_at AT3G10820 [Transcription elongation factor (TFIIS) family protein] -0.147 -0.019
91 245126_at AT2G47460 ATMYB12, MYB DOMAIN PROTEIN 12, MYB12, myb domain protein 12, PFG1, PRODUCTION OF FLAVONOL GLYCOSIDES 1 -0.146 -0.059
92 262590_at AT1G15100 RHA2A, RING-H2 finger A2A -0.144 -0.001
93 247807_at AT5G58360 ATOFP3, ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 3, OFP3, ovate family protein 3 -0.143 0.026
94 253513_at AT4G31760 [Peroxidase superfamily protein] -0.143 -0.018
95 251791_at AT3G55500 ATEXP16, ATEXPA16, expansin A16, ATHEXP ALPHA 1.7, EXP16, EXPANSIN 16, EXPA16, expansin A16 -0.143 -0.016
96 261491_at AT1G14350 AtMYB124, myb domain protein 124, FLP, FOUR LIPS, MYB124 -0.142 0.017
97 262322_at AT1G27590 unknown -0.141 -0.063
98 260300_at AT1G80340 ATGA3OX2, ARABIDOPSIS THALIANA GIBBERELLIN-3-OXIDASE 2, GA3OX2, gibberellin 3-oxidase 2, GA4H -0.140 -0.081
99 259320_at AT3G01080 ATWRKY58, WRKY DNA-BINDING PROTEIN 58, WRKY58, WRKY DNA-binding protein 58 -0.138 0.096
100 255745_at AT1G32030 [FUNCTIONS IN: DNA binding] -0.138 -0.057
101 248537_at AT5G50100 [Putative thiol-disulphide oxidoreductase DCC] -0.136 -0.050
102 245171_at AT2G47560 [RING/U-box superfamily protein] -0.131 -0.156
103 247473_at AT5G62260 AHL6, AT-hook motif nuclear localized protein 6 -0.130 0.016