4.0:Information of module
xyl-grown cell culture- 1h 1mM Glc
In comparison with nd-1 V. longisporum-inoculated 48 hpi help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0019243 methylglyoxal catabolic process to D-lac... BP 6.517e-03
GO:0009438 methylglyoxal metabolic process BP 6.991e-03
GO:0042182 ketone catabolic process BP 6.991e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0019725 cellular homeostasis BP 1.472e-03
GO:0048878 chemical homeostasis BP 1.776e-03
GO:0055082 cellular chemical homeostasis BP 2.189e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
xyl-grown cell culture- 1h 1mM Glc		 Log2 signal ratio
nd-1 V. longisporum-inoculated 48 hpi
1 252477_at AT3G46680 [UDP-Glycosyltransferase superfamily protein] 0.204 -0.063
2 265516_at AT2G06110 [gypsy-like retrotransposon family (Athila), has a 6.4e-72 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] 0.160 -0.017
3 259784_at AT1G29450 SAUR64, SMALL AUXIN UPREGULATED RNA 64 0.159 0.010
4 253073_at AT4G37410 CYP81F4, cytochrome P450, family 81, subfamily F, polypeptide 4 0.157 -0.061
5 248904_at AT5G46295 unknown 0.151 0.016
6 260758_at AT1G48930 AtGH9C1, glycosyl hydrolase 9C1, GH9C1, glycosyl hydrolase 9C1 0.149 0.032
7 261958_at AT1G64500 [Glutaredoxin family protein] 0.148 0.020
8 257427_at AT1G79060 unknown 0.147 0.007
9 257425_at AT1G60400 [F-box/RNI-like superfamily protein] 0.146 0.068
10 249689_at AT5G36190 unknown 0.142 -0.004
11 259203_at AT3G09130 unknown 0.141 -0.006
12 246337_at AT3G44910 ATCHX12, CHX12, cation/H+ exchanger 12 0.140 0.032
13 257832_at AT3G26740 CCL, CCR-like -0.214 0.164
14 247560_at AT5G61090 [Polynucleotidyl transferase, ribonuclease H-like superfamily protein] -0.116 0.037
15 253758_at AT4G29060 emb2726, embryo defective 2726 -0.115 0.001
16 251878_at AT3G54310 unknown -0.107 0.047
17 256693_at AT3G32060 [Mutator-like transposase family, has a 4.0e-63 P-value blast match to O80466 /172-336 Pfam PF03108 MuDR family transposase (MuDr-element domain)] -0.106 0.008
18 245240_at AT1G44510 [copia-like retrotransposon family, has a 0. P-value blast match to dbj|BAA78426.1| polyprotein (AtRE2-1) (Arabidopsis thaliana) (Ty1_Copia-element)] -0.106 0.029
19 255281_at AT4G04970 ATGSL01, GLUCAN SYNTHASE LIKE 1, ATGSL1, GLUCAN SYNTHASE LIKE-1, GSL01, GSL1, glucan synthase-like 1 -0.102 0.031
20 264489_at AT1G27370 SPL10, squamosa promoter binding protein-like 10 -0.101 0.033
21 258708_at AT3G09580 [FAD/NAD(P)-binding oxidoreductase family protein] -0.089 0.039
22 257380_at AT2G28090 [Heavy metal transport/detoxification superfamily protein ] -0.087 0.051
23 263609_at AT2G16250 [Leucine-rich repeat protein kinase family protein] -0.080 0.049