4.0:Information of module
xyl-grown cell culture- 1h 1mM Fru
In comparison with Col-0 wt Hypoxic help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0019375 galactolipid biosynthetic process BP 1.286e-05
GO:0019374 galactolipid metabolic process BP 1.428e-05
GO:0009247 glycolipid biosynthetic process BP 3.131e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0043687 post-translational protein modification BP 8.663e-04
GO:0009630 gravitropism BP 1.120e-03
GO:0009629 response to gravity BP 1.221e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
xyl-grown cell culture- 1h 1mM Fru		 Log2 signal ratio
Col-0 wt Hypoxic
1 266132_at AT2G45130 ATSPX3, ARABIDOPSIS THALIANA SPX DOMAIN GENE 3, SPX3, SPX domain gene 3 0.473 0.301
2 263391_at AT2G11810 ATMGD3, MGD3, MONOGALACTOSYL DIACYLGLYCEROL SYNTHASE 3, MGDC, monogalactosyldiacylglycerol synthase type C 0.467 0.284
3 246075_at AT5G20410 ATMGD2, ARABIDOPSIS THALIANA MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, MGD2, monogalactosyldiacylglycerol synthase 2 0.419 0.050
4 246001_at AT5G20790 unknown 0.333 0.435
5 258003_at AT3G29030 ATEXP5, ARABIDOPSIS THALIANA EXPANSIN 5, ATEXPA5, ARABIDOPSIS THALIANA EXPANSIN A5, ATHEXP ALPHA 1.4, EXP5, EXPANSIN 5, EXPA5, expansin A5 0.199 0.101
6 260388_at AT1G74070 [Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein] 0.166 0.010
7 258886_at AT3G05720 IMPA-7, importin alpha isoform 7 0.165 0.015
8 254611_at AT4G19095 unknown 0.164 0.032
9 263410_at AT2G04039 unknown 0.160 0.019
10 258856_at AT3G02040 AtGDPD1, GDPD1, Glycerophosphodiester phosphodiesterase 1, SRG3, senescence-related gene 3 0.158 0.229
11 246795_at AT5G27020 unknown 0.158 -0.037
12 266109_at AT2G37890 [Mitochondrial substrate carrier family protein] 0.154 0.107
13 250207_at AT5G13930 ATCHS, CHS, CHALCONE SYNTHASE, TT4, TRANSPARENT TESTA 4 0.153 0.044
14 263019_at AT1G23870 ATTPS9, trehalose-phosphatase/synthase 9, TPS9, TREHALOSE -6-PHOSPHATASE SYNTHASE S9, TPS9, trehalose-phosphatase/synthase 9 -0.218 0.044
15 245240_at AT1G44510 [copia-like retrotransposon family, has a 0. P-value blast match to dbj|BAA78426.1| polyprotein (AtRE2-1) (Arabidopsis thaliana) (Ty1_Copia-element)] -0.151 0.003
16 254671_at AT4G18410 [Mutator-like transposase family, has a 8.7e-30 P-value blast match to GB:AAA21566 mudrA of transposon=MuDR (MuDr-element) (Zea mays)] -0.134 0.013
17 262377_at AT1G73110 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.113 -0.012
18 254262_at AT4G23470 [PLAC8 family protein] -0.106 0.024
19 253741_at AT4G28890 [RING/U-box superfamily protein] -0.102 0.015
20 263514_at AT2G31860 [pseudogene] -0.101 -0.022
21 255137_at AT4G08370 [Proline-rich extensin-like family protein] -0.100 -0.030
22 251572_at AT3G58390 [Eukaryotic release factor 1 (eRF1) family protein] -0.097 -0.031
23 246402_at AT1G57570 [Mannose-binding lectin superfamily protein] -0.097 0.029
24 263071_at AT2G17490 [copia-like retrotransposon family, has a 9.3e-199 P-value blast match to gb|AAO73521.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family)] -0.093 0.016
25 261528_at AT1G14420 AT59 -0.091 -0.020
26 253093_at AT4G37460 SRFR1, SUPPRESSOR OF RPS4-RLD 1 -0.086 0.035