4.0:Information of module
bam7 bam8 untreated
In comparison with siliques AtHb1 control help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0016310 phosphorylation BP 5.816e-04
GO:0006464 cellular protein modification process BP 1.635e-03
GO:0036211 protein modification process BP 1.635e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0046483 heterocycle metabolic process BP 2.362e-05
GO:0018130 heterocycle biosynthetic process BP 4.011e-05
GO:0034641 cellular nitrogen compound metabolic pro... BP 4.734e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
bam7 bam8 untreated		 Log2 signal ratio
siliques AtHb1 control
1 255913_at AT1G66980 GDPDL2, Glycerophosphodiester phosphodiesterase (GDPD) like 2, SNC4, suppressor of npr1-1 constitutive 4 0.196 -0.026
2 259376_at AT3G16320 Tetratricopeptide repeat (TPR)-like superfamily protein 0.169 -0.087
3 248032_at AT5G55860 unknown 0.167 0.236
4 261339_at AT1G35710 [Protein kinase family protein with leucine-rich repeat domain] 0.166 0.267
5 258909_at AT3G06340 [DNAJ heat shock N-terminal domain-containing protein] 0.156 -0.030
6 251426_at AT3G60180 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.155 -0.009
7 259680_at AT1G77690 LAX3, like AUX1 3 0.152 -0.357
8 267065_at AT2G41080 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.148 -0.103
9 254418_at AT4G21480 STP12, sugar transporter protein 12 0.148 0.040
10 260211_at AT1G74440 unknown 0.143 0.064
11 255137_at AT4G08370 [Proline-rich extensin-like family protein] 0.138 0.002
12 249209_at AT5G42620 [metalloendopeptidases] 0.137 -0.099
13 251711_at AT3G56960 PIP5K4, phosphatidyl inositol monophosphate 5 kinase 4 0.133 -0.000
14 262192_at AT1G77830 [RING/U-box superfamily protein] 0.131 -0.050
15 263478_at AT2G31880 EVR, EVERSHED, SOBIR1, SUPPRESSOR OF BIR1 1 0.127 0.206
16 253063_at AT4G37640 ACA2, calcium ATPase 2 0.119 -0.001
17 248968_at AT5G45280 [Pectinacetylesterase family protein] 0.116 -0.137
18 266198_at AT2G38890 unknown 0.112 0.054
19 265125_at AT1G55410 [pseudogene] 0.111 -0.024
20 246354_at AT1G38950 unknown 0.109 -0.025
21 266993_at AT2G39210 [Major facilitator superfamily protein] 0.107 0.335
22 267513_at AT2G45620 URT1, UTP:RNA uridylyltransferase 1 0.107 0.025
23 257247_at AT3G24140 FMA, FAMA 0.107 -0.135
24 266627_at AT2G35340 MEE29, maternal effect embryo arrest 29 0.103 -0.028
25 258941_at AT3G09940 ATMDAR3, ARABIDOPSIS THALIANA MONODEHYDROASCORBATE REDUCTASE 3, MDAR2, MONODEHYDROASCORBATE REDUCTASE 2, MDAR3, MONODEHYDROASCORBATE REDUCTASE 3, MDHAR, monodehydroascorbate reductase 0.102 -0.015
26 263514_at AT2G31860 [pseudogene] 0.098 0.023
27 256371_at AT1G66770 AtSWEET6, SWEET6 0.097 -0.007
28 248416_at AT5G51630 [Disease resistance protein (TIR-NBS-LRR class) family] 0.093 0.081
29 249894_at AT5G22580 [Stress responsive A/B Barrel Domain] -0.535 -0.022
30 258124_at AT3G18215 unknown -0.365 -0.045
31 245319_at AT4G16146 [cAMP-regulated phosphoprotein 19-related protein] -0.268 0.210
32 260560_at AT2G43590 [Chitinase family protein] -0.261 0.016
33 250304_at AT5G12110 [Glutathione S-transferase, C-terminal-like] -0.232 0.029
34 254863_at AT4G11980 ATNUDT14, ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 14, ATNUDX14, nudix hydrolase homolog 14, NUDX14, nudix hydrolase homolog 14 -0.205 0.013
35 249430_at AT5G39900 [Small GTP-binding protein] -0.193 0.060
36 266079_at AT2G37860 LCD1, LOWER CELL DENSITY 1 -0.181 -0.006
37 259492_at AT1G15830 unknown -0.178 0.003
38 256048_at AT1G07025 [Mitochondrial substrate carrier family protein] -0.177 0.005
39 252830_at AT4G39850 ABCD1, ATP-binding cassette D1, ACN2, acetate non-utilizing 2, AtABCD1, Arabidopsis thaliana ATP-binding cassette D1, CTS, COMATOSE, PED3, PEROXISOME DEFECTIVE 3, PXA1, peroxisomal ABC transporter 1 -0.170 -0.002
40 249867_at AT5G23020 IMS2, 2-isopropylmalate synthase 2, MAM-L, METHYLTHIOALKYMALATE SYNTHASE-LIKE, MAM3 -0.170 -0.029
41 259105_at AT3G05500 [Rubber elongation factor protein (REF)] -0.170 0.029
42 255138_at AT4G08380 [Proline-rich extensin-like family protein] -0.167 -0.103
43 255335_at AT4G04430 [CACTA-like transposase family (Ptta/En/Spm), has a 8.6e-122 P-value blast match to At5g36655.1/81-333 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] -0.163 -0.020
44 252749_at AT3G43390 [similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT1G27780.1)] -0.154 0.004
45 267409_at AT2G34910 unknown -0.147 -0.014
46 266321_at AT2G46660 CYP78A6, cytochrome P450, family 78, subfamily A, polypeptide 6, EOD3, enhancer of da1-1 -0.147 0.019
47 259728_at AT1G60970 [SNARE-like superfamily protein] -0.142 0.079
48 256941_at AT3G30710 unknown -0.135 -0.010
49 264489_at AT1G27370 SPL10, squamosa promoter binding protein-like 10 -0.134 -0.143
50 263836_at AT2G40330 PYL6, PYR1-like 6, RCAR9, regulatory components of ABA receptor 9 -0.133 -0.188
51 257479_at AT1G16150 WAKL4, wall associated kinase-like 4 -0.131 -0.017
52 263486_at AT2G22200 [Integrase-type DNA-binding superfamily protein] -0.130 -0.011
53 266540_at AT2G35310 [Transcriptional factor B3 family protein] -0.130 -0.040
54 255705_at AT4G00160 [F-box/RNI-like/FBD-like domains-containing protein] -0.128 0.006
55 266765_at AT2G46860 AtPPa3, pyrophosphorylase 3, PPa3, pyrophosphorylase 3 -0.128 -0.134