4.0:Information of module
BAM8-N Ox untreated
In comparison with gapcp1gapcp2 ABA help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0050896 response to stimulus BP 1.170e-06
GO:0006833 water transport BP 8.492e-05
GO:0042044 fluid transport BP 8.492e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0015979 photosynthesis BP 1.115e-04
GO:0006091 generation of precursor metabolites and ... BP 3.021e-04
GO:0019684 photosynthesis, light reaction BP 3.725e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
BAM8-N Ox untreated		 Log2 signal ratio
gapcp1gapcp2 ABA
1 267254_at AT2G23030 SNRK2-9, SUCROSE NONFERMENTING 1-RELATED PROTEIN KINASE 2-9, SNRK2.9, SNF1-related protein kinase 2.9 0.536 -0.023
2 257365_x_at AT2G26020 PDF1.2b, plant defensin 1.2b 0.496 0.067
3 255943_at AT1G22370 AtUGT85A5, UDP-glucosyl transferase 85A5, UGT85A5, UDP-glucosyl transferase 85A5 0.443 -0.067
4 260546_at AT2G43520 ATTI2, trypsin inhibitor protein 2, TI2, trypsin inhibitor protein 2 0.405 -0.034
5 260146_at AT1G52770 [Phototropic-responsive NPH3 family protein] 0.399 -0.008
6 261923_at AT1G22380 AtUGT85A3, UDP-glucosyl transferase 85A3, UGT85A3, UDP-glucosyl transferase 85A3 0.373 0.047
7 266778_at AT2G29090 CYP707A2, cytochrome P450, family 707, subfamily A, polypeptide 2 0.369 0.007
8 245076_at AT2G23170 GH3.3 0.340 -0.021
9 266275_at AT2G29370 [NAD(P)-binding Rossmann-fold superfamily protein] 0.321 0.013
10 253277_at AT4G34230 ATCAD5, cinnamyl alcohol dehydrogenase 5, CAD-5, cinnamyl alcohol dehydrogenase 5, CAD5, cinnamyl alcohol dehydrogenase 5 0.318 0.008
11 266294_at AT2G29500 [HSP20-like chaperones superfamily protein] 0.317 0.000
12 261957_at AT1G64660 ATMGL, methionine gamma-lyase, MGL, methionine gamma-lyase 0.306 0.012
13 257971_at AT3G27530 GC6, golgin candidate 6, MAG4, MAIGO 4 0.295 0.035
14 248197_at AT5G54190 PORA, protochlorophyllide oxidoreductase A 0.279 -0.053
15 260784_at AT1G06180 ATMYB13, myb domain protein 13, ATMYBLFGN, MYB13, myb domain protein 13 0.272 -0.032
16 260560_at AT2G43590 [Chitinase family protein] 0.261 0.021
17 264751_at AT1G23020 ATFRO3, FERRIC REDUCTION OXIDASE 3, FRO3, ferric reduction oxidase 3 0.259 0.017
18 266993_at AT2G39210 [Major facilitator superfamily protein] 0.240 0.032
19 250389_at AT5G11320 AtYUC4, YUC4, YUCCA4 0.235 0.088
20 256513_at AT1G31480 SGR2, SHOOT GRAVITROPISM 2 0.232 -0.027
21 249439_at AT5G40020 [Pathogenesis-related thaumatin superfamily protein] 0.222 0.096
22 247175_at AT5G65280 GCL1, GCR2-like 1 0.220 0.006
23 247691_at AT5G59720 HSP18.2, heat shock protein 18.2 0.215 -0.068
24 250685_at AT5G06670 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.214 -0.082
25 265144_at AT1G51170 AGC2-3, AGC2 kinase 3, UCN, UNICORN 0.212 0.042
26 255942_at AT1G22360 AtUGT85A2, UDP-glucosyl transferase 85A2, UGT85A2, UDP-glucosyl transferase 85A2 0.209 -0.000
27 262913_at AT1G59960 [NAD(P)-linked oxidoreductase superfamily protein] 0.203 0.013
28 256062_at AT1G07090 LSH6, LIGHT SENSITIVE HYPOCOTYLS 6 0.201 -0.005
29 256789_at AT3G13672 SINA2 0.195 -0.024
30 247880_at AT5G57780 P1R1, P1R1 0.194 -0.021
31 260262_at AT1G68470 [Exostosin family protein] 0.178 0.023
32 256998_at AT3G14180 ASIL2, Arabidopsis 6B-interacting protein 1-like 2 0.176 0.017
33 245794_at AT1G32170 XTH30, xyloglucan endotransglucosylase/hydrolase 30, XTR4, xyloglucan endotransglycosylase 4 0.169 -0.008
34 261336_at AT1G44790 [ChaC-like family protein] 0.169 0.035
35 254807_at AT4G12700 unknown 0.167 0.005
36 252993_at AT4G38540 [FAD/NAD(P)-binding oxidoreductase family protein] 0.166 0.018
37 253219_at AT4G34990 AtMYB32, myb domain protein 32, MYB32, myb domain protein 32 0.165 0.004
38 249906_at AT5G22730 [F-box/RNI-like/FBD-like domains-containing protein] 0.153 -0.010
39 264862_at AT1G24330 [ARM repeat superfamily protein] 0.152 -0.002
40 266881_at AT2G44680 CKB4, casein kinase II beta subunit 4 0.151 -0.030
41 247362_at AT5G63140 ATPAP29, purple acid phosphatase 29, PAP29, PAP29, purple acid phosphatase 29 0.151 -0.002
42 263898_at AT2G21950 SKIP6, SKP1 interacting partner 6 0.144 0.011
43 251689_at AT3G56500 [serine-rich protein-related] 0.141 -0.020
44 264501_at AT1G09390 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.141 0.005
45 252485_at AT3G46530 RPP13, RECOGNITION OF PERONOSPORA PARASITICA 13 0.139 0.011
46 255409_at AT4G03090 AtNDX, NDX, Nodulin Homeobox 0.139 -0.067
47 246731_at AT5G27630 ACBP5, acyl-CoA binding protein 5, AtACBP5 0.139 0.019
48 259832_at AT1G69580 [Homeodomain-like superfamily protein] 0.138 -0.042
49 262415_at AT1G49400 emb1129, embryo defective 1129 0.132 -0.036
50 253916_at AT4G27240 [zinc finger (C2H2 type) family protein] 0.132 -0.039
51 260897_at AT1G29330 AERD2, ARABIDOPSIS ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2, ATERD2, ARABIDOPSIS THALIANA ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2, ERD2, ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2 0.132 -0.033
52 249780_at AT5G24240 [Phosphatidylinositol 3- and 4-kinase ] -0.619 -0.014
53 248997_at AT5G45300 BAM8, BETA-AMYLASE 8, BMY2, beta-amylase 2 -0.336 0.014
54 261037_at AT1G17420 ATLOX3, Arabidopsis thaliana lipoxygenase 3, LOX3, lipoxygenase 3 -0.284 0.038
55 263664_at AT1G04250 AXR3, AUXIN RESISTANT 3, IAA17, indole-3-acetic acid inducible 17 -0.274 0.019
56 256527_at AT1G66100 [Plant thionin] -0.260 0.014
57 251491_at AT3G59480 [pfkB-like carbohydrate kinase family protein] -0.243 -0.004
58 261226_at AT1G20190 ATEXP11, ATEXPA11, expansin 11, ATHEXP ALPHA 1.14, EXP11, EXPANSIN 11, EXPA11, expansin 11 -0.230 0.053
59 259925_at AT1G75040 PR-5, PR5, pathogenesis-related gene 5 -0.229 -0.017
60 262232_at AT1G68600 [Aluminium activated malate transporter family protein] -0.213 -0.021
61 259492_at AT1G15830 unknown -0.211 -0.004
62 257584_at AT1G54955 unknown -0.210 0.203
63 252006_at AT3G52820 ATPAP22, PURPLE ACID PHOSPHATASE 22, PAP22, purple acid phosphatase 22 -0.210 0.028
64 257066_at AT3G18280 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.205 -0.006
65 255372_at AT4G04120 [copia-like retrotransposon family, has a 3.8e-19 P-value blast match to GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)gi|4996361|dbj|BAA78423.1| polyprotein (Arabidopsis thaliana) (Ty1_Copia-element)] -0.200 0.058
66 260364_at AT1G70560 CKRC1, cytokinin induced root curling 1, SAV3, SHADE AVOIDANCE 3, TAA1, tryptophan aminotransferase of Arabidopsis 1, WEI8, WEAK ETHYLENE INSENSITIVE 8 -0.185 0.033
67 253040_at AT4G37800 XTH7, xyloglucan endotransglucosylase/hydrolase 7 -0.181 0.019
68 256066_at AT1G06980 unknown -0.180 0.000
69 246858_at AT5G25930 [Protein kinase family protein with leucine-rich repeat domain] -0.178 0.001
70 251017_at AT5G02760 APD7, Arabidopsis Pp2c clade D 7 -0.177 0.013
71 262244_at AT1G48260 CIPK17, CBL-interacting protein kinase 17, SnRK3.21, SNF1-RELATED PROTEIN KINASE 3.21 -0.175 0.075
72 250155_at AT5G15160 BHLH134, BASIC HELIX-LOOP-HELIX PROTEIN 134, BNQ2, BANQUO 2 -0.175 0.003
73 266396_at AT2G38790 unknown -0.174 -0.033
74 251933_at AT3G54060 unknown -0.172 0.133
75 266015_at AT2G24190 SDR2, short-chain dehydrogenase/reductase 2 -0.171 0.001
76 264557_at AT1G09550 [Pectinacetylesterase family protein] -0.171 0.031
77 254832_at AT4G12490 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.170 0.057
78 258241_at AT3G27650 LBD25, LOB domain-containing protein 25 -0.168 0.023
79 245000_at ATCG00210 YCF6 -0.166 0.062
80 262530_at AT1G17240 AtRLP2, receptor like protein 2, RLP2, receptor like protein 2 -0.163 0.047
81 258002_at AT3G28930 AIG2, AVRRPT2-INDUCED GENE 2 -0.161 -0.028
82 259737_at AT1G64400 LACS3, long-chain acyl-CoA synthetase 3 -0.161 0.019
83 246098_at AT5G20400 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.156 0.042
84 250173_at AT5G14340 AtMYB40, myb domain protein 40, MYB40, myb domain protein 40 -0.156 -0.073
85 250952_at AT5G03570 ATIREG2, ARABIDOPSIS THALIANA IRON-REGULATED PROTEIN 2, FPN2, FERROPORTIN 2, IREG2, iron regulated 2 -0.155 0.018
86 250699_at AT5G06820 SRF2, STRUBBELIG-receptor family 2 -0.154 0.109
87 250832_at AT5G04950 ATNAS1, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 1, NAS1, nicotianamine synthase 1 -0.154 0.009
88 247230_at AT5G65170 [VQ motif-containing protein] -0.151 0.029
89 258270_at AT3G15650 [alpha/beta-Hydrolases superfamily protein] -0.150 -0.024
90 263098_at AT2G16005 [MD-2-related lipid recognition domain-containing protein] -0.150 0.029
91 260484_at AT1G68360 [C2H2 and C2HC zinc fingers superfamily protein] -0.150 -0.011
92 260021_at AT1G30010 nMAT1, nuclear maturase 1 -0.149 0.008
93 260141_at AT1G66350 RGL, RGL1, RGA-like 1 -0.147 0.070
94 247253_at AT5G64790 [O-Glycosyl hydrolases family 17 protein] -0.147 0.017
95 251856_at AT3G54720 AMP1, ALTERED MERISTEM PROGRAM 1, AtAMP1, COP2, CONSTITUTIVE MORPHOGENESIS 2, HPT, HAUPTLING, MFO1, Multifolia, PT, PRIMORDIA TIMING -0.142 -0.003
96 256436_at AT3G11150 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.142 0.020
97 247906_at AT5G57420 IAA33, indole-3-acetic acid inducible 33 -0.141 0.039
98 257934_at AT3G25420 scpl21, serine carboxypeptidase-like 21 -0.141 0.066
99 263324_at AT2G04220 unknown -0.141 0.027
100 262045_at AT1G80240 DGR1, DUF642 L-GalL responsive gene 1 -0.140 0.003
101 257995_at AT3G19940 [Major facilitator superfamily protein] -0.140 0.062