4.0:Information of module
CeO2 germinant
In comparison with bbx24 in Simulated Shade help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010054 trichoblast differentiation BP 1.035e-27
GO:0010053 root epidermal cell differentiation BP 1.011e-26
GO:0090627 plant epidermal cell differentiation BP 1.653e-26
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0043207 response to external biotic stimulus BP 2.218e-37
GO:0051707 response to other organism BP 2.218e-37
GO:0009607 response to biotic stimulus BP 2.604e-37
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
CeO2 germinant		 Log2 signal ratio
bbx24 in Simulated Shade
1 254907_at AT4G11190 [Disease resistance-responsive (dirigent-like protein) family protein] 0.550 0.081
2 248727_at AT5G47990 CYP705A5, cytochrome P450, family 705, subfamily A, polypeptide 5, THAD, THALIAN-DIOL DESATURASE, THAD1, THALIAN-DIOL DESATURASE 0.529 0.052
3 253763_at AT4G28850 ATXTH26, XTH26, xyloglucan endotransglucosylase/hydrolase 26 0.488 0.224
4 249773_at AT5G24140 SQP2, squalene monooxygenase 2 0.454 0.056
5 263376_at AT2G20520 FLA6, FASCICLIN-like arabinogalactan 6 0.436 0.273
6 261157_at AT1G34510 [Peroxidase superfamily protein] 0.426 0.266
7 264347_at AT1G12040 LRX1, leucine-rich repeat/extensin 1 0.409 0.073
8 249868_at AT5G23030 TET12, tetraspanin12 0.401 0.026
9 254107_at AT4G25220 AtG3Pp2, glycerol-3-phosphate permease 2, G3Pp2, glycerol-3-phosphate permease 2, RHS15, root hair specific 15 0.376 0.172
10 257945_at AT3G21860 ASK10, SKP1-like 10, SK10, SKP1-like 10 0.370 -0.022
11 245689_at AT5G04120 [Phosphoglycerate mutase family protein] 0.359 0.062
12 247581_at AT5G61350 [Protein kinase superfamily protein] 0.346 0.131
13 254534_at AT4G19680 ATIRT2, IRON REGULATED TRANSPORTER 2, IRT2, iron regulated transporter 2 0.338 0.335
14 249756_at AT5G24313 unknown 0.337 0.260
15 264029_at AT2G03720 MRH6, morphogenesis of root hair 6 0.335 0.279
16 259064_at AT3G07490 AGD11, ARF-GAP domain 11, AtCML3, CML3, calmodulin-like 3 0.334 0.251
17 262260_at AT1G70850 MLP34, MLP-like protein 34 0.330 -0.008
18 248822_at AT5G47000 [Peroxidase superfamily protein] 0.327 0.071
19 248725_at AT5G47980 [HXXXD-type acyl-transferase family protein] 0.309 0.078
20 253910_at AT4G27290 [S-locus lectin protein kinase family protein] 0.306 0.056
21 245967_at AT5G19800 [hydroxyproline-rich glycoprotein family protein] 0.304 0.215
22 254837_at AT4G12360 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.303 -0.031
23 249934_at AT5G22410 RHS18, root hair specific 18 0.296 0.233
24 247536_at AT5G61650 CYCP4, CYCP4;2, CYCLIN P4;2 0.294 0.081
25 266191_at AT2G39040 [Peroxidase superfamily protein] 0.291 0.204
26 253985_at AT4G26220 CCoAOMT7, caffeoyl coenzyme A ester O-methyltransferase 7 0.290 0.039
27 258765_at AT3G10710 RHS12, root hair specific 12 0.289 0.269
28 263970_at AT2G42850 CYP718, cytochrome P450, family 718 0.283 0.141
29 253613_at AT4G30320 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.280 0.082
30 245567_at AT4G14630 GLP9, germin-like protein 9 0.280 0.079
31 251768_at AT3G55940 [Phosphoinositide-specific phospholipase C family protein] 0.276 0.000
32 253353_at AT4G33730 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.275 0.126
33 247914_at AT5G57540 AtXTH13, XTH13, xyloglucan endotransglucosylase/hydrolase 13 0.270 0.216
34 259720_at AT1G61080 [Hydroxyproline-rich glycoprotein family protein] 0.268 0.042
35 262838_at AT1G14960 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] 0.263 -0.024
36 253244_at AT4G34580 AtSFH1, COW1, CAN OF WORMS1, SRH1, SHORT ROOT HAIR 1 0.262 0.171
37 246872_at AT5G26080 [proline-rich family protein] 0.261 0.086
38 262564_at AT1G34330 [pseudogene] 0.260 0.178
39 260161_at AT1G79860 ATROPGEF12, MEE64, MATERNAL EFFECT EMBRYO ARREST 64, ROPGEF12, ROP (rho of plants) guanine nucleotide exchange factor 12 0.256 0.115
40 256073_at AT1G18100 E12A11, MFT, MOTHER OF FT AND TFL1 0.253 0.057
41 252833_at AT4G40090 AGP3, arabinogalactan protein 3 0.252 0.146
42 247871_at AT5G57530 AtXTH12, XTH12, xyloglucan endotransglucosylase/hydrolase 12 0.251 0.236
43 256352_at AT1G54970 ATPRP1, proline-rich protein 1, PRP1, proline-rich protein 1, RHS7, ROOT HAIR SPECIFIC 7 0.250 0.260
44 245736_at AT1G73330 ATDR4, drought-repressed 4, DR4, drought-repressed 4 0.250 0.029
45 262898_at AT1G59850 [ARM repeat superfamily protein] 0.247 0.171
46 248728_at AT5G48000 CYP708 A2, CYTOCHROME P450, FAMILY 708, SUBFAMILY A, POLYPEPTIDE 2, CYP708A2, cytochrome P450, family 708, subfamily A, polypeptide 2, THAH, THALIANOL HYDROXYLASE, THAH1, THALIANOL HYDROXYLASE 1 0.242 -0.054
47 247531_at AT5G61550 [U-box domain-containing protein kinase family protein] 0.241 0.056
48 263876_at AT2G21880 ATRAB7A, RAB GTPase homolog 7A, ATRABG2, ARABIDOPSIS RAB GTPASE HOMOLOG G2, RAB7A, RAB GTPase homolog 7A 0.240 0.081
49 261099_at AT1G62980 ATEXP18, ATEXPA18, expansin A18, ATHEXP ALPHA 1.25, EXP18, EXPANSIN 18, EXPA18, expansin A18 0.238 0.177
50 261221_at AT1G19960 unknown 0.238 0.046
51 246652_at AT5G35190 EXT13, extensin 13 0.237 0.360
52 245966_at AT5G19790 RAP2.11, related to AP2 11 0.235 0.118
53 251226_at AT3G62680 ATPRP3, ARABIDOPSIS THALIANA PROLINE-RICH PROTEIN 3, PRP3, proline-rich protein 3 0.232 0.119
54 264391_at AT1G11920 [Pectin lyase-like superfamily protein] 0.231 -0.032
55 263552_x_at AT2G24980 EXT6, extensin 6 0.229 0.107
56 259195_at AT3G01730 unknown 0.228 0.105
57 253073_at AT4G37410 CYP81F4, cytochrome P450, family 81, subfamily F, polypeptide 4 0.227 0.010
58 250905_at AT5G03640 [Protein kinase superfamily protein] 0.224 0.038
59 253569_at AT4G31250 [Leucine-rich repeat protein kinase family protein] 0.222 0.123
60 260366_at AT1G70460 AtPERK13, proline-rich extensin-like receptor kinase 13, PERK13, proline-rich extensin-like receptor kinase 13, RHS10, root hair specific 10 0.219 0.086
61 249797_at AT5G23750 [Remorin family protein] 0.213 0.061
62 256283_at AT3G12540 unknown 0.213 0.209
63 250682_x_at AT5G06630 [proline-rich extensin-like family protein] 0.211 0.140
64 257668_at AT3G20460 [Major facilitator superfamily protein] 0.211 0.201
65 250801_at AT5G04960 [Plant invertase/pectin methylesterase inhibitor superfamily] 0.210 0.148
66 254044_at AT4G25820 ATXTH14, XTH14, xyloglucan endotransglucosylase/hydrolase 14, XTR9, xyloglucan endotransglycosylase 9 0.209 0.115
67 256128_at AT1G18140 ATLAC1, LAC1, laccase 1 0.208 -0.015
68 267191_at AT2G44110 ATMLO15, MILDEW RESISTANCE LOCUS O 15, MLO15, MILDEW RESISTANCE LOCUS O 15 0.207 0.154
69 261647_at AT1G27740 RSL4, root hair defective 6-like 4 0.206 0.121
70 253699_at AT4G29800 PLA IVD, PLP8, PATATIN-like protein 8 0.205 0.105
71 246991_at AT5G67400 RHS19, root hair specific 19 0.201 0.153
72 258832_at AT3G07070 [Protein kinase superfamily protein] 0.200 0.178
73 255632_at AT4G00680 ADF8, actin depolymerizing factor 8 0.198 0.200
74 254467_at AT4G20450 [Leucine-rich repeat protein kinase family protein] 0.198 0.144
75 266765_at AT2G46860 AtPPa3, pyrophosphorylase 3, PPa3, pyrophosphorylase 3 0.196 0.227
76 267565_at AT2G30750 CYP71A12, cytochrome P450, family 71, subfamily A, polypeptide 12 -1.120 -0.388
77 261021_at AT1G26380 [FAD-binding Berberine family protein] -1.094 -0.358
78 261449_at AT1G21120 IGMT2, indole glucosinolate O-methyltransferase 2 -0.822 0.019
79 247949_at AT5G57220 CYP81F2, cytochrome P450, family 81, subfamily F, polypeptide 2 -0.724 -0.252
80 261459_at AT1G21100 IGMT1, indole glucosinolate O-methyltransferase 1 -0.701 -0.095
81 261475_at AT1G14550 [Peroxidase superfamily protein] -0.686 -0.216
82 261474_at AT1G14540 PER4, peroxidase 4 -0.672 -0.097
83 257206_at AT3G16530 [Legume lectin family protein] -0.644 -0.116
84 260406_at AT1G69920 ATGSTU12, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 12, GSTU12, glutathione S-transferase TAU 12 -0.598 -0.362
85 247215_at AT5G64905 PROPEP3, elicitor peptide 3 precursor -0.536 -0.196
86 265260_at AT2G43000 ANAC042, NAC domain containing protein 42, JUB1, JUNGBRUNNEN 1, NAC042, NAC domain containing protein 42 -0.507 -0.231
87 261005_at AT1G26420 [FAD-binding Berberine family protein] -0.505 -0.242
88 261006_at AT1G26410 [FAD-binding Berberine family protein] -0.501 -0.248
89 256499_at AT1G36640 unknown -0.493 -0.044
90 245038_at AT2G26560 PLA IIA, PHOSPHOLIPASE A 2A, PLA2A, phospholipase A 2A, PLAII alpha, PLP2, PATATIN-LIKE PROTEIN 2, PLP2, PHOSPHOLIPASE A 2A -0.491 -0.244
91 259481_at AT1G18970 GLP4, germin-like protein 4 -0.475 -0.101
92 259120_at AT3G02240 GLV4, GOLVEN 4, RGF7, root meristem growth factor 7 -0.442 0.069
93 260568_at AT2G43570 CHI, chitinase, putative -0.432 -0.111
94 246368_at AT1G51890 [Leucine-rich repeat protein kinase family protein] -0.392 -0.105
95 266712_at AT2G46750 AtGulLO2, GulLO2, L -gulono-1,4-lactone ( L -GulL) oxidase 2 -0.385 -0.006
96 249188_at AT5G42830 [HXXXD-type acyl-transferase family protein] -0.378 -0.162
97 260560_at AT2G43590 [Chitinase family protein] -0.368 0.019
98 266658_at AT2G25735 unknown -0.366 -0.089
99 266010_at AT2G37430 ZAT11, zinc finger of Arabidopsis thaliana 11 -0.360 -0.049
100 260225_at AT1G74590 ATGSTU10, GLUTATHIONE S-TRANSFERASE TAU 10, GSTU10, glutathione S-transferase TAU 10 -0.351 -0.071
101 260261_at AT1G68450 PDE337, PIGMENT DEFECTIVE 337 -0.337 -0.037
102 263228_at AT1G30700 [FAD-binding Berberine family protein] -0.332 0.031
103 261020_at AT1G26390 [FAD-binding Berberine family protein] -0.330 -0.579
104 257919_at AT3G23250 ATMYB15, MYB DOMAIN PROTEIN 15, ATY19, MYB15, myb domain protein 15 -0.326 -0.264
105 267384_at AT2G44370 [Cysteine/Histidine-rich C1 domain family protein] -0.326 -0.006
106 259479_at AT1G19020 unknown -0.316 -0.099
107 249459_at AT5G39580 [Peroxidase superfamily protein] -0.316 -0.029
108 249481_at AT5G38900 [Thioredoxin superfamily protein] -0.315 -0.147
109 253796_at AT4G28460 unknown -0.305 -0.226
110 267588_at AT2G42060 [Cysteine/Histidine-rich C1 domain family protein] -0.305 0.077
111 246858_at AT5G25930 [Protein kinase family protein with leucine-rich repeat domain] -0.305 -0.084
112 245082_at AT2G23270 unknown -0.302 -0.195
113 254231_at AT4G23810 ATWRKY53, WRKY53 -0.295 -0.140
114 257061_at AT3G18250 [Putative membrane lipoprotein] -0.290 -0.139
115 264757_at AT1G61360 [S-locus lectin protein kinase family protein] -0.287 -0.080
116 263948_at AT2G35980 ATNHL10, ARABIDOPSIS NDR1/HIN1-LIKE 10, NHL10, NDR1/HIN1-LIKE, YLS9, YELLOW-LEAF-SPECIFIC GENE 9 -0.285 -0.075
117 249893_at AT5G22555 unknown -0.282 -0.017
118 259443_at AT1G02360 [Chitinase family protein] -0.279 0.075
119 249941_at AT5G22270 unknown -0.276 -0.041
120 250464_at AT5G10040 unknown -0.272 0.016
121 248703_at AT5G48430 [Eukaryotic aspartyl protease family protein] -0.266 0.079
122 250695_at AT5G06740 LecRK-S.5, L-type lectin receptor kinase S.5 -0.265 -0.003
123 260239_at AT1G74360 [Leucine-rich repeat protein kinase family protein] -0.263 -0.166
124 252234_at AT3G49780 ATPSK3 (FORMER SYMBOL), ATPSK4, phytosulfokine 4 precursor, PSK4, phytosulfokine 4 precursor -0.260 0.004
125 252334_at AT3G48850 MPT2, mitochondrial phosphate transporter 2, PHT3;2, phosphate transporter 3;2 -0.256 -0.225
126 264223_s_at AT3G16030 CES101, CALLUS EXPRESSION OF RBCS 101, RFO3, RESISTANCE TO FUSARIUM OXYSPORUM 3 -0.254 -0.005
127 254889_at AT4G11650 ATOSM34, osmotin 34, OSM34, osmotin 34 -0.251 0.005
128 245875_at AT1G26240 [Proline-rich extensin-like family protein] -0.251 -0.222
129 249364_at AT5G40590 [Cysteine/Histidine-rich C1 domain family protein] -0.251 0.084
130 251176_at AT3G63380 [ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein] -0.245 -0.066
131 266167_at AT2G38860 DJ-1e, DJ1E, YLS5 -0.245 -0.059
132 262930_at AT1G65690 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] -0.244 0.016
133 250983_at AT5G02780 GSTL1, glutathione transferase lambda 1 -0.243 -0.136
134 266992_at AT2G39200 ATMLO12, MILDEW RESISTANCE LOCUS O 12, MLO12, MILDEW RESISTANCE LOCUS O 12 -0.240 -0.040
135 258787_at AT3G11840 PUB24, plant U-box 24 -0.239 -0.051
136 247685_at AT5G59680 [Leucine-rich repeat protein kinase family protein] -0.238 -0.076
137 246270_at AT4G36500 unknown -0.234 -0.025
138 245041_at AT2G26530 AR781 -0.233 -0.141
139 251884_at AT3G54150 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.231 -0.264
140 247145_at AT5G65600 LecRK-IX.2, L-type lectin receptor kinase IX.2 -0.230 -0.187
141 253505_at AT4G31970 CYP82C2, cytochrome P450, family 82, subfamily C, polypeptide 2 -0.230 -0.451
142 245173_at AT2G47520 AtERF71, Arabidopsis thaliana ethylene response factor 71, ERF71, ethylene response factor 71, HRE2, HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 2 -0.229 -0.308
143 265668_at AT2G32020 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] -0.226 -0.202
144 261240_at AT1G32940 ATSBT3.5, SBT3.5 -0.222 -0.168
145 260394_at AT1G74080 ATMYB122, MYB DOMAIN PROTEIN 122, MYB122, myb domain protein 122 -0.215 -0.061
146 246854_at AT5G26200 [Mitochondrial substrate carrier family protein] -0.211 -0.032
147 266967_at AT2G39530 [Uncharacterised protein family (UPF0497)] -0.210 0.103
148 248316_at AT5G52670 [Copper transport protein family] -0.207 -0.075
149 259033_at AT3G09405 [Pectinacetylesterase family protein] -0.207 -0.257