4.0:Information of module
seedling 24h after HZE atm-1
In comparison with seedling 3h after HZE WT help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010243 response to organonitrogen compound BP 1.137e-09
GO:0010200 response to chitin BP 2.020e-09
GO:0009719 response to endogenous stimulus BP 1.222e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006412 translation BP 2.663e-19
GO:0001510 RNA methylation BP 6.330e-12
GO:0043414 macromolecule methylation BP 4.443e-10
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
seedling 24h after HZE atm-1		 Log2 signal ratio
seedling 3h after HZE WT
1 254443_at AT4G21070 ATBRCA1, ARABIDOPSIS THALIANA BREAST CANCER SUSCEPTIBILITY1, BRCA1, breast cancer susceptibility1 0.760 1.459
2 263061_at AT2G18190 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.649 0.634
3 254926_at AT4G11280 ACS6, 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6, ATACS6 0.598 -0.050
4 248668_at AT5G48720 XRI, X-RAY INDUCED TRANSCRIPT, XRI1, X-RAY INDUCED TRANSCRIPT 1 0.578 1.073
5 253505_at AT4G31970 CYP82C2, cytochrome P450, family 82, subfamily C, polypeptide 2 0.530 0.491
6 254287_at AT4G22960 unknown 0.504 0.920
7 253051_at AT4G37490 CYC1, CYCLIN 1, CYCB1, CYCB1;1, CYCLIN B1;1 0.392 0.887
8 250781_at AT5G05410 DREB2, DEHYDRATION-RESPONSIVE ELEMENT BINDING PROTEIN 2, DREB2A, DRE-binding protein 2A 0.378 0.191
9 253757_at AT4G28950 ARAC7, Arabidopsis RAC-like 7, ATRAC7, ATROP9, RAC7, ROP9, RHO-related protein from plants 9 0.375 0.678
10 261065_at AT1G07500 SMR5, SIAMESE-RELATED 5 0.363 0.683
11 249326_at AT5G40840 AtRAD21.1, Sister chromatid cohesion 1 (SCC1) protein homolog 2, SYN2 0.334 1.059
12 263515_at AT2G21640 unknown 0.334 0.811
13 255500_at AT4G02390 APP, poly(ADP-ribose) polymerase, PARP2, poly(ADP-ribose) polymerase 2, PP, poly(ADP-ribose) polymerase 0.321 0.921
14 247393_at AT5G63130 [Octicosapeptide/Phox/Bem1p family protein] 0.312 -0.059
15 266503_at AT2G47780 [Rubber elongation factor protein (REF)] 0.270 -0.019
16 257809_at AT3G27060 ATTSO2, TSO2, TSO MEANING 'UGLY' IN CHINESE 2 0.260 0.365
17 247925_at AT5G57560 TCH4, Touch 4, XTH22, xyloglucan endotransglucosylase/hydrolase 22 0.256 0.253
18 252483_at AT3G46600 [GRAS family transcription factor] 0.251 0.265
19 263935_at AT2G35930 AtPUB23, PUB23, plant U-box 23 0.245 0.005
20 253364_at AT4G33160 [F-box family protein] 0.205 0.565
21 263179_at AT1G05710 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.201 0.301
22 251282_at AT3G61630 CRF6, cytokinin response factor 6 0.186 0.313
23 251755_at AT3G55790 unknown 0.179 0.244
24 258139_at AT3G24520 AT-HSFC1, HSFC1, heat shock transcription factor C1 0.172 -0.211
25 259481_at AT1G18970 GLP4, germin-like protein 4 0.160 -0.272
26 256306_at AT1G30370 DLAH, DAD1-like acylhydrolase 0.154 0.450
27 253240_at AT4G34510 KCS17, 3-ketoacyl-CoA synthase 17 0.154 1.307
28 255160_at AT4G07820 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.243 0.252
29 249331_at AT5G40950 RPL27, ribosomal protein large subunit 27 -0.216 -0.039
30 257151_at AT3G27200 [Cupredoxin superfamily protein] -0.216 -0.136
31 246920_at AT5G25090 AtENODL13, ENODL13, early nodulin-like protein 13 -0.204 -0.595
32 257450_at AT1G10530 unknown -0.163 0.049
33 245861_at AT5G28300 AtGT2L, GT2L, GT-2Like protein -0.149 0.393
34 251517_at AT3G59370 [Vacuolar calcium-binding protein-related] -0.143 -0.119
35 253947_at AT4G26760 MAP65-2, microtubule-associated protein 65-2 -0.137 -0.249
36 265205_at AT2G36660 PAB7, poly(A) binding protein 7 -0.136 -0.025
37 260887_at AT1G29160 [Dof-type zinc finger DNA-binding family protein] -0.136 0.013
38 250560_at AT5G08020 ATRPA70B, ARABIDOPSIS THALIANA RPA70-KDA SUBUNIT B, RPA70B, RPA70-kDa subunit B -0.135 -0.274
39 251317_at AT3G61490 [Pectin lyase-like superfamily protein] -0.134 -0.093
40 266223_at AT2G28790 [Pathogenesis-related thaumatin superfamily protein] -0.133 -0.287
41 256890_at AT3G23830 AtGRP4, GR-RBP4, GRP4, glycine-rich RNA-binding protein 4 -0.125 -0.198
42 263282_at AT2G14095 unknown -0.120 0.081
43 245800_at AT1G46264 AT-HSFB4, HSFB4, heat shock transcription factor B4, SCZ, SCHIZORIZA -0.119 0.059
44 259432_at AT1G01520 ASG4, ALTERED SEED GERMINATION 4 -0.116 -0.480
45 260865_at AT1G43760 [DNAse I-like superfamily protein] -0.115 0.001
46 248417_at AT5G51650 unknown -0.108 0.111
47 263133_at AT1G78450 [SOUL heme-binding family protein] -0.108 -0.347
48 260585_at AT2G43650 EMB2777, EMBRYO DEFECTIVE 2777 -0.107 -0.417
49 249837_at AT5G23480 [SWIB/MDM2 domain] -0.107 -0.128
50 251070_at AT5G01940 [eukaryotic translation initiation factor 2B family protein / eIF-2B family protein] -0.107 0.307
51 250327_at AT5G12050 unknown -0.106 0.063
52 259172_at AT3G03630 CS26, cysteine synthase 26 -0.105 -0.222
53 252650_at AT3G44690 unknown -0.104 0.066