4.0:Information of module
seedling 24h after HZE WT
In comparison with Col0-PsmES4326-24hpi help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010243 response to organonitrogen compound BP 3.310e-18
GO:0006950 response to stress BP 5.871e-18
GO:0010200 response to chitin BP 1.140e-17
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006412 translation BP 4.129e-16
GO:0001510 RNA methylation BP 6.338e-12
GO:0044085 cellular component biogenesis BP 1.153e-09
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
seedling 24h after HZE WT		 Log2 signal ratio
Col0-PsmES4326-24hpi
1 254443_at AT4G21070 ATBRCA1, ARABIDOPSIS THALIANA BREAST CANCER SUSCEPTIBILITY1, BRCA1, breast cancer susceptibility1 1.074 0.033
2 252539_at AT3G45730 unknown 0.877 0.194
3 249784_at AT5G24280 GMI1, GAMMA-IRRADIATION AND MITOMYCIN C INDUCED 1 0.877 0.034
4 247615_at AT5G60250 [zinc finger (C3HC4-type RING finger) family protein] 0.862 0.027
5 248086_at AT5G55490 ATGEX1, GAMETE EXPRESSED PROTEIN 1, GEX1, gamete expressed protein 1 0.859 -0.030
6 248668_at AT5G48720 XRI, X-RAY INDUCED TRANSCRIPT, XRI1, X-RAY INDUCED TRANSCRIPT 1 0.764 0.076
7 250914_at AT5G03780 TRFL10, TRF-like 10 0.747 -0.140
8 254055_at AT4G25330 unknown 0.645 0.176
9 254287_at AT4G22960 unknown 0.644 0.085
10 253051_at AT4G37490 CYC1, CYCLIN 1, CYCB1, CYCB1;1, CYCLIN B1;1 0.626 0.090
11 261065_at AT1G07500 SMR5, SIAMESE-RELATED 5 0.619 0.627
12 246132_at AT5G20850 ATRAD51, RAD51 0.602 -0.014
13 249326_at AT5G40840 AtRAD21.1, Sister chromatid cohesion 1 (SCC1) protein homolog 2, SYN2 0.599 0.028
14 255500_at AT4G02390 APP, poly(ADP-ribose) polymerase, PARP2, poly(ADP-ribose) polymerase 2, PP, poly(ADP-ribose) polymerase 0.590 0.027
15 249809_at AT5G23910 [ATP binding microtubule motor family protein] 0.573 -0.051
16 267246_at AT2G30250 ATWRKY25, WRKY25, WRKY DNA-binding protein 25 0.488 0.337
17 253044_at AT4G37290 unknown 0.485 0.618
18 247317_at AT5G64060 anac103, NAC domain containing protein 103, NAC103, NAC domain containing protein 103 0.463 -0.001
19 254565_at AT4G19130 [Replication factor-A protein 1-related] 0.459 -0.064
20 245137_at AT2G45460 [SMAD/FHA domain-containing protein ] 0.456 -0.134
21 259224_at AT3G07800 AtTK1a, TK1a, thymidine kinase 1a 0.443 0.021
22 265926_at AT2G18600 [Ubiquitin-conjugating enzyme family protein] 0.423 0.355
23 247081_at AT5G66130 ATRAD17, RADIATION SENSITIVE 17, RAD17, RADIATION SENSITIVE 17 0.417 0.048
24 255941_at AT1G20350 ATTIM17-1, translocase inner membrane subunit 17-1, TIM17-1, translocase inner membrane subunit 17-1 0.398 0.274
25 250372_at AT5G11460 unknown 0.392 -0.165
26 257809_at AT3G27060 ATTSO2, TSO2, TSO MEANING 'UGLY' IN CHINESE 2 0.370 -0.311
27 250666_at AT5G07100 WRKY26, WRKY DNA-binding protein 26 0.370 0.737
28 257840_at AT3G25250 AGC2, AGC2-1, AGC2 kinase 1, AtOXI1, OXI1, oxidative signal-inducible1 0.362 0.818
29 252330_at AT3G48770 [DNA binding] 0.346 0.137
30 263515_at AT2G21640 unknown 0.340 0.587
31 255872_at AT2G30360 CIPK11, CBL-INTERACTING PROTEIN KINASE 11, PKS5, PROTEIN KINASE SOS2-LIKE 5, SIP4, SOS3-interacting protein 4, SNRK3.22, SNF1-RELATED PROTEIN KINASE 3.22 0.337 0.639
32 253157_at AT4G35740 ATRECQ3, A. THALIANA RECQ HELICASE 3, RecQl3 0.314 -0.003
33 263179_at AT1G05710 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.302 0.484
34 265449_at AT2G46610 At-RS31a, arginine/serine-rich splicing factor 31a, RS31a, arginine/serine-rich splicing factor 31a 0.267 -0.074
35 260477_at AT1G11050 [Protein kinase superfamily protein] 0.263 0.437
36 250062_at AT5G17760 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.262 0.610
37 247528_at AT5G61460 ATRAD18, MIM, hypersensitive to MMS, irradiation and MMC, SMC6B, STRUCTURAL MAINTENANCE OF CHROMOSOMES 6B 0.259 -0.001
38 262548_at AT1G31280 AGO2, argonaute 2, AtAGO2 0.253 0.354
39 262324_at AT1G64170 ATCHX16, cation/H+ exchanger 16, CHX16, cation/H+ exchanger 16 0.252 -0.007
40 264116_at AT2G31320 PARP1, POLY(ADP-RIBOSE) POLYMERASE 1 0.251 -0.234
41 259792_at AT1G29690 CAD1, constitutively activated cell death 1 0.249 0.309
42 248738_at AT5G48020 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.245 0.250
43 251636_at AT3G57530 ATCPK32, CDPK32, CPK32, calcium-dependent protein kinase 32 0.239 0.181
44 263882_at AT2G21790 ATRNR1, RIBONUCLEOTIDE REDUCTASE LARGE SUBUNIT 1, CLS8, CRINKLY LEAVES 8, DPD2, defective in pollen organelle DNA degradation 2, R1, RIBONUCLEOTIDE REDUCTASE 1, RNR1, ribonucleotide reductase 1 0.232 -0.264
45 256459_at AT1G36180 ACC2, acetyl-CoA carboxylase 2 0.230 -0.035
46 254592_at AT4G18880 AT-HSFA4A, ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A4A, HSF A4A, heat shock transcription factor A4A 0.221 0.246
47 261063_at AT1G07520 [GRAS family transcription factor] 0.218 0.439
48 257017_at AT3G19620 [Glycosyl hydrolase family protein] 0.217 0.111
49 253284_at AT4G34150 [Calcium-dependent lipid-binding (CaLB domain) family protein] 0.216 0.206
50 257135_at AT3G12900 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.210 0.024
51 254878_at AT4G11660 AT-HSFB2B, HSF7, HSFB2B, HEAT SHOCK TRANSCRIPTION FACTOR B2B 0.210 0.240
52 247080_at AT5G66140 PAD2, proteasome alpha subunit D2 0.210 0.292
53 246821_at AT5G26920 CBP60G, Cam-binding protein 60-like G 0.209 0.643
54 265075_at AT1G55450 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.205 0.139
55 247426_at AT5G62570 CBP60a, calmodulin-binding protein 60a 0.203 0.212
56 245353_at AT4G16000 unknown 0.200 0.435
57 245209_at AT5G12340 unknown 0.198 1.249
58 259602_at AT1G56520 [Disease resistance protein (TIR-NBS-LRR class) family] 0.196 0.356
59 247717_at AT5G59320 LTP3, lipid transfer protein 3 -0.543 -0.284
60 257506_at AT1G29440 SAUR63, SMALL AUXIN UP RNA 63 -0.423 -1.026
61 265117_at AT1G62500 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.284 0.120
62 249916_at AT5G22880 H2B, HISTONE H2B, HTB2, histone B2 -0.283 -0.037
63 253217_at AT4G34970 ADF9, actin depolymerizing factor 9 -0.280 -0.030
64 257899_at AT3G28345 ABCB15, ATP-binding cassette B15, MDR13, multi-drug resistance 13 -0.275 0.025
65 249278_at AT5G41900 [alpha/beta-Hydrolases superfamily protein] -0.256 -0.663
66 257134_at AT3G12870 unknown -0.245 -0.078
67 257740_at AT3G27330 [zinc finger (C3HC4-type RING finger) family protein] -0.233 -0.026
68 248282_at AT5G52900 MAKR6, MEMBRANE-ASSOCIATED KINASE REGULATOR 6 -0.211 -0.096
69 261058_at AT1G01370 CENH3, CENTROMERIC HISTONE H3, HTR12 -0.195 0.154
70 248710_at AT5G48480 [Lactoylglutathione lyase / glyoxalase I family protein] -0.194 -0.033
71 249011_at AT5G44670 GALS2, galactan synthase 2 -0.192 -0.506
72 245306_at AT4G14690 ELIP2, EARLY LIGHT-INDUCIBLE PROTEIN 2 -0.191 -0.082
73 250012_x_at AT5G18060 SAUR23, SMALL AUXIN UP RNA 23 -0.189 -0.689
74 246519_at AT5G15780 [Pollen Ole e 1 allergen and extensin family protein] -0.182 -0.200
75 253207_at AT4G34770 SAUR1, SMALL AUXIN UPREGULATED RNA 1 -0.169 -0.103
76 259805_at AT1G47890 AtRLP7, receptor like protein 7, RLP7, receptor like protein 7 -0.167 0.873
77 256126_at AT1G18050 [SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein] -0.164 0.027
78 255907_at AT1G17920 HDG12, homeodomain GLABROUS 12 -0.161 -0.024
79 263040_at AT1G23300 [MATE efflux family protein] -0.159 0.062
80 253661_at AT4G30130 unknown -0.155 0.063
81 254644_at AT4G18510 CLE2, CLAVATA3/ESR-related 2 -0.148 0.161
82 253794_at AT4G28720 YUC8, YUCCA 8 -0.147 -0.292
83 258587_at AT3G04310 unknown -0.144 0.071
84 266427_at AT2G07170 [ARM repeat superfamily protein] -0.143 -0.063
85 250758_at AT5G06000 ATEIF3G2, ARABIDOPSIS THALIANA EUKARYOTIC TRANSLATION INITIATION FACTOR 3G2, EIF3G2, eukaryotic translation initiation factor 3G2 -0.141 -0.139
86 246432_at AT5G17490 AtRGL3, RGL3, RGA-like protein 3 -0.141 0.159
87 250937_at AT5G03230 unknown -0.140 -0.204
88 252167_at AT3G50560 [NAD(P)-binding Rossmann-fold superfamily protein] -0.137 -0.129
89 251420_at AT3G60490 [Integrase-type DNA-binding superfamily protein] -0.137 0.002
90 262871_at AT1G65010 [INVOLVED IN: flower development] -0.137 -0.802
91 248631_at AT5G49000 [Galactose oxidase/kelch repeat superfamily protein] -0.136 0.267
92 250891_at AT5G04530 KCS19, 3-ketoacyl-CoA synthase 19 -0.133 -0.108
93 254065_at AT4G25420 AT2301, ATGA20OX1, ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 1, GA20OX1, GA5, GA REQUIRING 5 -0.133 -0.370
94 247244_at AT5G64710 [Putative endonuclease or glycosyl hydrolase] -0.133 0.027
95 263787_at AT2G46420 unknown -0.132 0.020
96 259417_at AT1G02340 FBI1, HFR1, LONG HYPOCOTYL IN FAR-RED, REP1, REDUCED PHYTOCHROME SIGNALING 1, RSF1, REDUCED SENSITIVITY TO FAR-RED LIGHT 1 -0.132 -0.043
97 250892_at AT5G03760 ATCSLA09, ATCSLA9, CSLA09, CSLA9, CELLULOSE SYNTHASE LIKE A9, RAT4, RESISTANT TO AGROBACTERIUM TRANSFORMATION 4 -0.131 -0.834
98 263726_at AT2G13610 ABCG5, ATP-binding cassette G5 -0.125 -0.098
99 255652_at AT4G00950 MEE47, maternal effect embryo arrest 47 -0.124 -0.412
100 264743_at AT1G62090 [pseudogene] -0.124 0.137
101 249571_at AT5G37620 [Cysteine/Histidine-rich C1 domain family protein] -0.122 0.124
102 256490_at AT1G31460 unknown -0.121 -0.033
103 266629_at AT2G35590 [pseudogene] -0.121 0.019
104 266340_at AT2G01480 [O-fucosyltransferase family protein] -0.120 0.302
105 248286_at AT5G52870 MAKR5, MEMBRANE-ASSOCIATED KINASE REGULATOR 5 -0.119 0.052
106 265418_at AT2G20880 AtERF53, ERF53, ERF domain 53 -0.119 0.358
107 265960_at AT2G37470 [Histone superfamily protein] -0.119 -0.056
108 261306_at AT1G48610 [AT hook motif-containing protein] -0.118 -0.078
109 249169_at AT5G42880 unknown -0.116 0.060
110 249673_at AT5G35920 pseudogene -0.115 0.068
111 259583_at AT1G28070 unknown -0.114 0.134
112 256212_at AT1G50970 [Membrane trafficking VPS53 family protein] -0.114 0.200
113 249566_at AT5G38450 CYP735A1, cytochrome P450, family 735, subfamily A, polypeptide 1 -0.111 0.050
114 251517_at AT3G59370 [Vacuolar calcium-binding protein-related] -0.110 0.118
115 253516_at AT4G31360 [selenium binding] -0.109 -0.117