4.0:Information of module
Full C2 T1
In comparison with ptpks2 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0051052 regulation of DNA metabolic process BP 9.355e-04
GO:0048507 meristem development BP 2.678e-03
GO:0010014 meristem initiation BP 3.048e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0055067 monovalent inorganic cation homeostasis BP 6.407e-03
GO:0009834 plant-type secondary cell wall biogenesi... BP 1.197e-02
GO:0007167 enzyme linked receptor protein signaling... BP 1.935e-02
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Full C2 T1		 Log2 signal ratio
ptpks2
1 245688_at AT1G28290 AGP31, arabinogalactan protein 31 0.168 0.135
2 246458_at AT5G16860 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.165 -0.072
3 265656_at AT2G13820 AtXYP2, XYP2, xylogen protein 2 0.165 0.243
4 256125_at AT1G18250 ATLP-1 0.156 0.044
5 251846_at AT3G54560 HTA11, histone H2A 11 0.148 0.076
6 251455_at AT3G60100 CSY5, citrate synthase 5 0.144 -0.019
7 248496_at AT5G50790 AtSWEET10, SWEET10 0.133 -0.073
8 253732_at AT4G29140 ADS1, ACTIVATED DISEASE SUSCEPTIBILITY 1 0.133 0.006
9 253480_at AT4G31840 AtENODL15, ENODL15, early nodulin-like protein 15 0.132 0.134
10 264802_at AT1G08560 ATSYP111, KN, KNOLLE, SYP111, syntaxin of plants 111 0.128 0.190
11 261237_at AT1G32980 [Subtilisin-like serine endopeptidase family protein] 0.118 -0.267
12 260761_at AT1G49150 unknown 0.115 -0.128
13 263130_at AT1G78650 POLD3 0.114 -0.028
14 259208_at AT3G09060 [Pentatricopeptide repeat (PPR) superfamily protein] 0.112 -0.166
15 253657_at AT4G30110 ATHMA2, ARABIDOPSIS HEAVY METAL ATPASE 2, HMA2, heavy metal atpase 2 0.111 0.123
16 258222_at AT3G15680 [Ran BP2/NZF zinc finger-like superfamily protein] 0.104 0.221
17 262069_at AT1G80090 CBSX4, CBS domain containing protein 4 0.103 0.006
18 247535_at AT5G61620 [myb-like transcription factor family protein] 0.102 -0.066
19 256420_at AT1G33475 [SNARE-like superfamily protein] 0.101 -0.112
20 249362_at AT5G40550 AtSGF29b, SGF29b, SaGa associated Factor 29 b 0.101 -0.315
21 250396_at AT5G10970 [C2H2 and C2HC zinc fingers superfamily protein] 0.100 0.047
22 258341_at AT3G22790 NET1A, Networked 1A 0.100 0.053
23 245196_at AT1G67750 [Pectate lyase family protein] 0.099 0.023
24 259780_at AT1G29630 [5'-3' exonuclease family protein] 0.098 -0.045
25 248356_at AT5G52350 ATEXO70A3, exocyst subunit exo70 family protein A3, EXO70A3, exocyst subunit exo70 family protein A3 0.098 -0.077
26 249287_at AT5G41250 [Exostosin family protein] 0.098 -0.140
27 248939_at AT5G45790 [Ubiquitin carboxyl-terminal hydrolase family protein] 0.097 -0.122
28 260441_at AT1G68260 ALT3, acyl-lipid thioesterase 3 0.097 0.113
29 254178_at AT4G23880 unknown 0.094 -0.056
30 249039_at AT5G44310 [Late embryogenesis abundant protein (LEA) family protein] 0.094 -0.052
31 264252_at AT1G09180 ATSAR1, SECRETION-ASSOCIATED RAS 1, ATSARA1A, secretion-associated RAS super family 1, SARA1A, secretion-associated RAS super family 1 0.094 0.035
32 265178_at AT1G23540 AtPERK12, proline-rich extensin like receptor kinase, IGI1, INFLORESCENCE GROWTH INHIBITOR 1, PERK12, proline-rich extensin-like receptor kinase 12 0.093 -0.140
33 247441_at AT5G62710 [Leucine-rich repeat protein kinase family protein] 0.093 0.099
34 257467_at AT1G31320 LBD4, LOB domain-containing protein 4 0.093 -0.058
35 258630_at AT3G02820 [zinc knuckle (CCHC-type) family protein] 0.093 0.005
36 260333_at AT1G70500 [Pectin lyase-like superfamily protein] 0.092 -0.081
37 252763_at AT3G42725 [Putative membrane lipoprotein] 0.092 -0.017
38 266223_at AT2G28790 [Pathogenesis-related thaumatin superfamily protein] 0.092 -0.085
39 264025_at AT2G21050 LAX2, like AUXIN RESISTANT 2 0.091 -0.027
40 253607_at AT4G30330 [Small nuclear ribonucleoprotein family protein] 0.090 0.187
41 253149_at AT4G35650 IDH-III, isocitrate dehydrogenase III 0.089 -0.020
42 247056_at AT5G66750 ATDDM1, CHA1, CHR01, CHROMATIN REMODELING 1, CHR1, chromatin remodeling 1, DDM1, DECREASED DNA METHYLATION 1, SOM1, SOMNIFEROUS 1, SOM4 0.089 -0.030
43 263150_at AT1G54050 [HSP20-like chaperones superfamily protein] -0.316 0.226
44 262148_at AT1G52560 [HSP20-like chaperones superfamily protein] -0.265 -0.012
45 250351_at AT5G12030 AT-HSP17.6A, heat shock protein 17.6A, HSP17.6, HEAT SHOCK PROTEIN 17.6, HSP17.6A, heat shock protein 17.6A -0.246 0.016
46 247780_at AT5G58770 AtcPT4, cPT4, cis-prenyltransferase 4 -0.213 0.128
47 267263_at AT2G23110 [Late embryogenesis abundant protein, group 6] -0.201 -0.019
48 253943_at AT4G27030 FAD4, FATTY ACID DESATURASE 4, FADA, fatty acid desaturase A -0.178 0.073
49 262608_at AT1G14120 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.162 -0.107
50 263809_at AT2G04570 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.151 0.062
51 261569_at AT1G01060 LHY, LATE ELONGATED HYPOCOTYL, LHY1, LATE ELONGATED HYPOCOTYL 1 -0.146 0.102
52 252780_at AT3G42960 ASD, ATA1, TAPETUM 1, TA1, TAPETUM1 -0.140 -0.116
53 259348_at AT3G03770 [Leucine-rich repeat protein kinase family protein] -0.139 0.227
54 266391_at AT2G41290 SSL2, strictosidine synthase-like 2 -0.127 0.027
55 257551_at AT3G13270 unknown -0.126 -0.072
56 265709_at AT2G03540 unknown -0.125 -0.093
57 258652_at AT3G09910 ATRAB18C, ATRABC2B, RAB GTPase homolog C2B, RABC2b, RAB GTPase homolog C2B -0.121 -0.055
58 247727_at AT5G59490 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -0.118 0.009
59 250106_at AT5G16640 [Pentatricopeptide repeat (PPR) superfamily protein] -0.114 0.053
60 252734_at AT3G43160 MEE38, maternal effect embryo arrest 38 -0.113 -0.035
61 246297_at AT3G51760 unknown -0.112 0.064
62 256975_at AT3G21000 [Gag-Pol-related retrotransposon family protein] -0.110 -0.041
63 261157_at AT1G34510 [Peroxidase superfamily protein] -0.109 -0.124
64 259773_at AT1G29500 SAUR66, SMALL AUXIN UPREGULATED RNA 66 -0.108 0.104
65 255518_at AT4G02300 PME39, pectin methylesterase 39 -0.107 -0.209
66 246896_at AT5G25550 [Leucine-rich repeat (LRR) family protein] -0.107 -0.157
67 262696_at AT1G75870 unknown -0.106 -0.267
68 259927_at AT1G75100 JAC1, J-domain protein required for chloroplast accumulation response 1 -0.105 -0.005
69 257057_at AT3G15310 unknown -0.104 0.120
70 267582_at AT2G41970 [Protein kinase superfamily protein] -0.102 -0.080
71 249856_at AT5G22980 scpl47, serine carboxypeptidase-like 47 -0.100 -0.038
72 256073_at AT1G18100 E12A11, MFT, MOTHER OF FT AND TFL1 -0.100 -0.083
73 262356_at AT1G73000 PYL3, PYR1-like 3, RCAR13, regulatory components of ABA receptor 13 -0.098 0.049
74 265801_at AT2G35670 FIE2, FERTILIZATION-INDEPENDENT ENDOSPERM 2, FIS2, FERTILIZATION INDEPENDENT SEED 2 -0.098 -0.073
75 260970_at AT1G53640 unknown -0.098 0.041
76 266589_at AT2G46250 [myosin heavy chain-related] -0.098 0.028
77 261752_at AT1G76290 [AMP-dependent synthetase and ligase family protein] -0.098 0.009
78 245992_at AT5G20690 PRK6, pollen receptor like kinase 6 -0.097 -0.247
79 259177_at AT3G01630 [Major facilitator superfamily protein] -0.096 -0.132
80 267331_at AT2G19280 [Pentatricopeptide repeat (PPR) superfamily protein] -0.096 0.040
81 256364_at AT1G66550 ATWRKY67, WRKY67, WRKY DNA-binding protein 67 -0.095 -0.092
82 250794_at AT5G05270 AtCHIL, CHIL, chalcone isomerase like -0.095 0.276
83 257514_at AT1G43940 unknown -0.093 -0.183