4.0:Information of module
Full AC2 T2
In comparison with root endodermis and quiescent center 40 mM NaCl help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009853 photorespiration BP 1.348e-05
GO:0043094 cellular metabolic compound salvage BP 3.513e-05
GO:0080129 proteasome core complex assembly BP 1.571e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0016246 RNA interference BP 1.844e-02
GO:0035194 posttranscriptional gene silencing by RN... BP 2.084e-02
GO:0016441 posttranscriptional gene silencing BP 2.236e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Full AC2 T2		 Log2 signal ratio
root endodermis and quiescent center 40 mM NaCl
1 256647_at AT3G13610 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0.380 -0.055
2 245363_at AT4G15120 [VQ motif-containing protein] 0.206 0.100
3 256597_at AT3G28500 [60S acidic ribosomal protein family] 0.198 -0.018
4 261249_at AT1G05880 ARI12, ARIADNE 12, ATARI12, ARABIDOPSIS ARIADNE 12 0.196 0.015
5 245158_at AT2G33130 RALF18, RALFL18, ralf-like 18 0.196 0.005
6 266109_at AT2G37890 [Mitochondrial substrate carrier family protein] 0.195 -0.059
7 248253_at AT5G53290 CRF3, cytokinin response factor 3 0.192 0.067
8 245107_at AT2G41690 AT-HSFB3, heat shock transcription factor B3, HSFB3, HEAT SHOCK TRANSCRIPTION FACTOR B3, HSFB3, heat shock transcription factor B3 0.190 -0.041
9 245696_at AT5G04190 PKS4, phytochrome kinase substrate 4 0.184 0.007
10 248979_at AT5G45080 AtPP2-A6, phloem protein 2-A6, PP2-A6, phloem protein 2-A6 0.179 -0.020
11 259921_at AT1G72540 [Protein kinase superfamily protein] 0.179 0.039
12 257201_at AT3G23740 unknown 0.176 -0.021
13 260122_at AT1G33900 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.166 -0.017
14 248004_at AT5G56230 PRA1.G2, prenylated RAB acceptor 1.G2 0.163 -0.003
15 245239_at AT4G25530 FWA, FLOWERING WAGENINGEN, HDG6, HOMEODOMAIN GLABROUS 6 0.162 -0.033
16 249352_at AT5G40430 AtMYB22, myb domain protein 22, MYB22, myb domain protein 22 0.161 0.035
17 263580_at AT2G17140 [Pentatricopeptide repeat (PPR) superfamily protein] 0.160 0.006
18 265144_at AT1G51170 AGC2-3, AGC2 kinase 3, UCN, UNICORN 0.160 0.065
19 252043_at AT3G52390 [TatD related DNase] 0.158 -0.032
20 249166_at AT5G42840 [Cysteine/Histidine-rich C1 domain family protein] 0.156 -0.042
21 251252_at AT3G62230 DAF1, DUO1-activated F-box 1 0.153 0.014
22 263476_at AT2G31870 PARG1, poly(ADP-ribose) glycohydrolase 1, TEJ, Sanskrit for 'bright' 0.150 -0.024
23 247515_at AT5G61740 ABCA10, ATP-binding cassette A10, ATATH14, ARABIDOPSIS THALIANA ABC2 HOMOLOG 14, ATH14, ABC2 homolog 14 0.150 0.063
24 257331_at ATMG01330 ORF107H 0.149 0.102
25 253824_at AT4G27940 ATMTM1, ARABIDOPSIS MANGANESE TRACKING FACTOR FOR MITOCHONDRIAL SOD2, MTM1, manganese tracking factor for mitochondrial SOD2 0.148 0.103
26 245073_at AT2G23210 [UDP-Glycosyltransferase superfamily protein] 0.147 -0.036
27 253718_at AT4G29450 [Leucine-rich repeat protein kinase family protein] 0.145 -0.061
28 247927_at AT5G57310 unknown 0.145 0.040
29 255005_at AT4G09990 GXM2, glucuronoxylan methyltransferase 2 0.143 -0.148
30 260233_at AT1G74550 CYP98A9, cytochrome P450, family 98, subfamily A, polypeptide 9 0.142 0.012
31 266618_at AT2G35480 unknown 0.141 -0.041
32 262674_at AT1G75910 EXL4, extracellular lipase 4 0.140 0.001
33 249721_at AT5G24655 LSU4, RESPONSE TO LOW SULFUR 4 0.139 0.168
34 245466_at AT4G16600 PGSIP8, plant glycogenin-like starch initiation protein 8 0.137 0.111
35 257506_at AT1G29440 SAUR63, SMALL AUXIN UP RNA 63 0.137 -0.061
36 249094_at AT5G43890 SUPER1, SUPPRESSOR OF ER 1, YUC5, YUCCA5 0.136 -0.109
37 248069_at AT5G55650 unknown 0.134 0.038
38 254318_at AT4G22530 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.134 0.334
39 250342_at AT5G11870 [Alkaline phytoceramidase (aPHC)] 0.134 -0.013
40 267078_at AT2G40960 [Single-stranded nucleic acid binding R3H protein] 0.133 0.039
41 254917_at AT4G11350 unknown 0.131 0.199
42 249547_at AT5G38160 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.130 0.036
43 260859_at AT1G43780 scpl44, serine carboxypeptidase-like 44 0.129 -0.030
44 247094_at AT5G66280 GMD1, GDP-D-mannose 4,6-dehydratase 1 0.129 -0.244
45 258560_at AT3G06020 FAF4, FANTASTIC FOUR 4 0.128 0.025
46 265176_at AT1G23520 unknown 0.128 -0.061
47 263681_at AT1G26840 ATORC6, ARABIDOPSIS THALIANA ORIGIN RECOGNITION COMPLEX PROTEIN 6, ORC6, origin recognition complex protein 6 0.126 0.063
48 267604_at AT2G32930 ZFN2, zinc finger nuclease 2 0.125 0.121
49 253222_at AT4G34850 LAP5, LESS ADHESIVE POLLEN 5, PSKB, polyketide synthase B 0.125 0.060
50 257026_at AT3G19200 unknown 0.124 0.077
51 262765_at AT1G13150 CYP86C4, cytochrome P450, family 86, subfamily C, polypeptide 4 0.123 -0.035
52 248341_at AT5G52220 unknown 0.123 -0.044
53 253413_at AT4G33020 ATZIP9, ZIP9 0.123 0.030
54 260355_at AT1G69180 CRC, CRABS CLAW 0.122 -0.005
55 247059_at AT5G66690 UGT72E2 0.121 -0.025
56 254413_at AT4G21440 ATM4, A. THALIANA MYB 4, ATMYB102, MYB-like 102, MYB102, MYB102, MYB-like 102 -0.276 0.151
57 267497_at AT2G30540 [Thioredoxin superfamily protein] -0.225 0.055
58 251652_at AT3G57380 [Glycosyltransferase family 61 protein] -0.223 0.118
59 262719_at AT1G43590 unknown -0.211 -0.018
60 261931_at AT1G22430 [GroES-like zinc-binding dehydrogenase family protein] -0.208 0.124
61 252047_at AT3G52490 SMXL3, SMAX1-like 3 -0.186 -0.031
62 251095_at AT5G01510 RUS5, ROOT UV-B SENSITIVE 5 -0.186 -0.068
63 267271_at AT2G02540 ATHB21, homeobox protein 21, HB21, homeobox protein 21, ZFHD4, ZINC FINGER HOMEODOMAIN 4, ZHD3, ZINC FINGER HOMEODOMAIN 3 -0.161 0.005
64 252734_at AT3G43160 MEE38, maternal effect embryo arrest 38 -0.157 0.003
65 253320_at AT4G34020 AtDJ1C, DJ-1 homolog C, DJ-1c, DJ1C, DJ-1 homolog C -0.153 -0.011
66 245440_at AT4G16680 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.153 0.078
67 248299_at AT5G53080 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.150 0.058
68 250157_at AT5G15180 [Peroxidase superfamily protein] -0.142 0.274
69 245149_at AT2G47620 ATSWI3A, SWITCH/sucrose nonfermenting 3A, CHB1, SWI3A, SWITCH/sucrose nonfermenting 3A -0.142 0.059
70 256818_at AT3G21420 LBO1, LATERAL BRANCHING OXIDOREDUCTASE 1 -0.131 -0.019
71 249951_at AT5G18930 BUD2, BUSHY AND DWARF 2, SAMDC4 -0.129 0.022
72 255518_at AT4G02300 PME39, pectin methylesterase 39 -0.128 0.042
73 248094_at AT5G55220 [trigger factor type chaperone family protein] -0.125 -0.006
74 258961_at AT3G10580 [Homeodomain-like superfamily protein] -0.122 0.036
75 266957_at AT2G34640 HMR, HEMERA, PTAC12, plastid transcriptionally active 12, TAC12 -0.119 -0.144
76 250891_at AT5G04530 KCS19, 3-ketoacyl-CoA synthase 19 -0.118 0.049
77 249320_at AT5G40910 [Disease resistance protein (TIR-NBS-LRR class) family] -0.116 0.009
78 252918_at AT4G38980 unknown -0.114 0.035
79 264270_at AT1G60260 BGLU5, beta glucosidase 5 -0.114 0.049
80 263230_at AT1G05670 [Pentatricopeptide repeat (PPR-like) superfamily protein] -0.113 0.076
81 246983_at AT5G67200 [Leucine-rich repeat protein kinase family protein] -0.113 -0.060
82 260388_at AT1G74070 [Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein] -0.109 0.013
83 266429_at AT2G07190 unknown -0.109 -0.021
84 248282_at AT5G52900 MAKR6, MEMBRANE-ASSOCIATED KINASE REGULATOR 6 -0.107 -0.062
85 261004_at AT1G26450 [Carbohydrate-binding X8 domain superfamily protein] -0.105 0.257
86 245095_at AT2G40860 [protein kinase family protein / protein phosphatase 2C ( PP2C) family protein] -0.104 -0.018
87 257737_at AT3G27440 UKL5, uridine kinase-like 5 -0.104 -0.055
88 245130_at AT2G45340 [Leucine-rich repeat protein kinase family protein] -0.104 0.169
89 261427_at AT1G18670 IBS1, IMPAIRED IN BABA-INDUCED STERILITY 1 -0.102 -0.019
90 255184_at AT4G07730 [gypsy-like retrotransposon family (Athila), has a 6.8e-198 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] -0.101 -0.011
91 265076_at AT1G55490 CPN60B, chaperonin 60 beta, Cpn60beta1, chaperonin-60beta1, LEN1, LESION INITIATION 1 -0.099 0.024
92 261002_at AT1G26520 [Cobalamin biosynthesis CobW-like protein] -0.098 0.022
93 257459_at AT1G24040 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] -0.097 -0.008
94 257630_at AT3G26150 CYP71B16, cytochrome P450, family 71, subfamily B, polypeptide 16 -0.096 0.030
95 256111_at AT1G16820 [vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related] -0.096 -0.009
96 266194_at AT2G39090 APC7, anaphase-promoting complex 7, AtAPC7 -0.095 0.021
97 255234_at AT4G05500 [pseudogene] -0.095 -0.011
98 246949_at AT5G25140 CYP71B13, cytochrome P450, family 71, subfamily B, polypeptide 13 -0.094 0.053
99 256659_at AT3G12020 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.092 -0.104
100 246875_at AT5G26130 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.087 0.052
101 245790_at AT1G32200 ACT1, ACYLTRANSFERASE 1, ATS1 -0.087 -0.055
102 247461_at AT5G62100 ATBAG2, BCL-2-associated athanogene 2, BAG2, BCL-2-associated athanogene 2 -0.085 0.003
103 258853_at AT3G06440 [Galactosyltransferase family protein] -0.085 0.022
104 264942_at AT1G67340 [HCP-like superfamily protein with MYND-type zinc finger] -0.084 0.049
105 246829_at AT5G26570 ATGWD3, OK1, PWD, PHOSPHOGLUCAN WATER DIKINASE -0.084 -0.017
106 265438_at AT2G20970 unknown -0.083 0.051
107 257057_at AT3G15310 unknown -0.083 0.002
108 263962_at AT2G36350 [Protein kinase superfamily protein] -0.082 0.019
109 258350_at AT3G17510 CIPK1, CBL-interacting protein kinase 1, SnRK3.16, SNF1-RELATED PROTEIN KINASE 3.16 -0.081 0.072
110 257712_at AT3G27420 unknown -0.081 0.000