4.0:Information of module
35S::TCP
In comparison with ddm1-2 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0044699 single-organism process BP 7.290e-11
GO:0032502 developmental process BP 7.813e-08
GO:0044767 single-organism developmental process BP 2.486e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0045229 external encapsulating structure organiz... BP 2.792e-14
GO:0042545 cell wall modification BP 5.076e-14
GO:0009827 plant-type cell wall modification BP 3.151e-13
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
35S::TCP		 Log2 signal ratio
ddm1-2
1 252629_at AT3G44970 [Cytochrome P450 superfamily protein] 1.138 -0.011
2 264346_at AT1G12010 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 1.056 -0.252
3 265511_at AT2G05540 [Glycine-rich protein family] 0.803 -0.171
4 247252_at AT5G64770 CLEL 9, CLE-like 9, GLV2, GOLVEN 2, RGF9, root meristem growth factor 9 0.778 0.145
5 254065_at AT4G25420 AT2301, ATGA20OX1, ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 1, GA20OX1, GA5, GA REQUIRING 5 0.761 -0.204
6 250751_at AT5G05890 [UDP-Glycosyltransferase superfamily protein] 0.750 -0.095
7 252269_at AT3G49580 LSU1, RESPONSE TO LOW SULFUR 1 0.749 0.036
8 245000_at ATCG00210 YCF6 0.646 0.055
9 249010_at AT5G44580 unknown 0.612 0.103
10 245005_at ATCG00330 RPS14, chloroplast ribosomal protein S14 0.606 0.090
11 267389_at AT2G44460 BGLU28, beta glucosidase 28 0.603 -0.107
12 267461_at AT2G33830 AtDRM2, DRM2, dormancy associated gene 2 0.599 -0.410
13 257835_at AT3G25180 CYP82G1, cytochrome P450, family 82, subfamily G, polypeptide 1 0.584 -0.018
14 260556_at AT2G43620 [Chitinase family protein] 0.583 0.389
15 247696_at AT5G59780 ATMYB59, MYB DOMAIN PROTEIN 59, ATMYB59-1, ATMYB59-2, ATMYB59-3, MYB59, myb domain protein 59 0.557 -0.058
16 264083_at AT2G31230 ATERF15, ethylene-responsive element binding factor 15, ERF15, ethylene-responsive element binding factor 15 0.540 -0.192
17 256818_at AT3G21420 LBO1, LATERAL BRANCHING OXIDOREDUCTASE 1 0.538 0.031
18 263406_at AT2G04160 AIR3, AUXIN-INDUCED IN ROOT CULTURES 3 0.512 -0.024
19 245460_at AT4G16990 RLM3, RESISTANCE TO LEPTOSPHAERIA MACULANS 3 0.501 0.068
20 267084_at AT2G41180 SIB2, sigma factor binding protein 2 0.500 -0.201
21 263231_at AT1G05680 UGT74E2, Uridine diphosphate glycosyltransferase 74E2 0.500 -0.039
22 246781_at AT5G27350 SFP1 0.498 -0.321
23 245108_at AT2G41510 ATCKX1, CYTOKININ OXIDASE/DEHYDROGENASE 1, CKX1, cytokinin oxidase/dehydrogenase 1 0.491 -0.094
24 248676_at AT5G48850 ATSDI1, SULPHUR DEFICIENCY-INDUCED 1 0.429 0.039
25 263046_at AT2G05380 GRP3S, glycine-rich protein 3 short isoform 0.408 0.216
26 249800_at AT5G23660 AtSWEET12, MTN3, homolog of Medicago truncatula MTN3, SWEET12 0.407 -0.109
27 249211_at AT5G42680 unknown 0.405 -0.000
28 245113_at AT2G41660 MIZ1, mizu-kussei 1 0.391 -0.183
29 251665_at AT3G57040 ARR9, response regulator 9, ATRR4, RESPONSE REGULATOR 4 0.383 -0.026
30 259560_at AT1G21270 WAK2, wall-associated kinase 2 0.382 0.031
31 251857_at AT3G54770 ARP1, ABA-regulated RNA-binding protein 1 0.380 0.019
32 247600_at AT5G60890 ATMYB34, ATR1, ALTERED TRYPTOPHAN REGULATION 1, MYB34, myb domain protein 34 0.380 -0.100
33 258326_at AT3G22760 SOL1 0.373 -0.273
34 256926_at AT3G22540 unknown 0.365 -0.038
35 253217_at AT4G34970 ADF9, actin depolymerizing factor 9 0.365 0.088
36 252184_at AT3G50660 AtDWF4, CLM, CLOMAZONE-RESISTANT, CYP90B1, CYTOCHROME P450 90B1, DWF4, DWARF 4, PSC1, PARTIALLY SUPPRESSING COI1 INSENSITIVITY TO JA 1, SAV1, SHADE AVOIDANCE 1, SNP2, SUPPRESSOR OF NPH4 2 0.355 -0.015
37 244937_at ATCG01110 NDHH, NAD(P)H dehydrogenase subunit H 0.349 0.028
38 249306_at AT5G41400 [RING/U-box superfamily protein] 0.341 -0.112
39 252607_at AT3G44990 AtXTH31, ATXTR8, XTH31, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31, XTR8, xyloglucan endo-transglycosylase-related 8 0.335 0.044
40 252167_at AT3G50560 [NAD(P)-binding Rossmann-fold superfamily protein] 0.331 -0.046
41 260557_at AT2G43610 [Chitinase family protein] 0.326 -0.177
42 250025_at AT5G18290 SIP1;2, SIP1B, SMALL AND BASIC INTRINSIC PROTEIN 1B 0.323 -0.103
43 254598_at AT4G18990 XTH29, xyloglucan endotransglucosylase/hydrolase 29 0.322 -0.146
44 246947_at AT5G25120 CYP71B11, ytochrome p450, family 71, subfamily B, polypeptide 11 0.313 -0.137
45 249752_at AT5G24660 LSU2, RESPONSE TO LOW SULFUR 2 0.311 -0.063
46 257573_at AT2G33990 iqd9, IQ-domain 9 0.311 0.132
47 257636_at AT3G26200 CYP71B22, cytochrome P450, family 71, subfamily B, polypeptide 22 0.309 0.160
48 253791_at AT4G28640 IAA11, indole-3-acetic acid inducible 11 0.309 -0.159
49 264886_at AT1G61120 GES, GERANYLLINALOOL SYNTHASE, TPS04, terpene synthase 04, TPS4, TERPENE SYNTHASE 4 0.299 -0.039
50 254247_at AT4G23260 CRK18, cysteine-rich RLK (RECEPTOR-like protein kinase) 18 0.299 0.102
51 255302_at AT4G04830 ATMSRB5, methionine sulfoxide reductase B5, MSRB5, methionine sulfoxide reductase B5 0.298 0.060
52 246495_at AT5G16200 [50S ribosomal protein-related] 0.298 0.127
53 246884_at AT5G26220 AtGGCT2;1, GGCT2;1, gamma-glutamyl cyclotransferase 2;1 0.298 -0.074
54 260841_at AT1G29195 unknown 0.296 -0.047
55 254293_at AT4G23060 IQD22, IQ-domain 22 0.292 0.004
56 256096_at AT1G13650 unknown 0.292 0.025
57 253841_at AT4G27830 AtBGLU10, BGLU10, beta glucosidase 10 0.292 -0.084
58 264725_at AT1G22885 unknown 0.287 -0.005
59 257876_at AT3G17130 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.281 0.090
60 261873_at AT1G11350 CBRLK1, CALMODULIN-BINDING RECEPTOR-LIKE PROTEIN KINASE, RKS2, SD1-13, S-domain-1 13 0.280 0.092
61 249817_at AT5G23820 ML3, MD2-related lipid recognition 3 0.272 0.177
62 245002_at ATCG00270 PSBD, photosystem II reaction center protein D 0.270 0.098
63 248466_at AT5G50720 ATHVA22E, ARABIDOPSIS THALIANA HVA22 HOMOLOGUE E, HVA22E, HVA22 homologue E 0.269 -0.140
64 252827_at AT4G39950 CYP79B2, cytochrome P450, family 79, subfamily B, polypeptide 2 0.267 0.162
65 247107_at AT5G66040 STR16, sulfurtransferase protein 16 0.266 0.071
66 259286_at AT3G11480 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0.265 0.130
67 264773_at AT1G22900 [Disease resistance-responsive (dirigent-like protein) family protein] 0.262 0.018
68 265547_at AT2G28305 ATLOG1, LOG1, LONELY GUY 1 0.261 -0.166
69 245208_at AT5G12330 LRP1, LATERAL ROOT PRIMORDIUM 1 0.260 -0.049
70 257697_at AT3G12700 NANA, NANA 0.259 0.047
71 264638_at AT1G65480 FT, FLOWERING LOCUS T, RSB8, REDUCED STEM BRANCHING 8 0.256 -0.239
72 246270_at AT4G36500 unknown 0.249 -0.019
73 261991_at AT1G33700 [Beta-glucosidase, GBA2 type family protein] 0.247 0.113
74 253244_at AT4G34580 AtSFH1, COW1, CAN OF WORMS1, SRH1, SHORT ROOT HAIR 1 0.244 0.079
75 259180_at AT3G01680 AtSEOR1, Arabidopsis thaliana sieve element occlusion-related 1, SEOb, sieve element occlusion b, SEOR1, Sieve-Element-Occlusion-Related 1 0.243 -0.006
76 261876_at AT1G50590 [RmlC-like cupins superfamily protein] 0.232 0.055
77 251563_at AT3G57880 [Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein] 0.231 -0.001
78 252858_at AT4G39770 TPPH, trehalose-6-phosphate phosphatase H 0.230 -0.142
79 247457_at AT5G62170 TRM25, TON1 Recruiting Motif 25 0.230 0.183
80 267354_at AT2G39880 AtMYB25, myb domain protein 25, MYB25, myb domain protein 25 0.228 -0.055
81 255579_at AT4G01460 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.227 -0.022
82 260334_at AT1G70510 ATK1, ARABIDOPSIS THALIANA KN 1, KNAT2, KNOTTED-like from Arabidopsis thaliana 2 0.222 0.076
83 252322_at AT3G48550 unknown 0.222 0.116
84 245007_at ATCG00350 PSAA 0.221 0.096
85 256335_at AT1G72110 [O-acyltransferase (WSD1-like) family protein] 0.221 0.104
86 251722_at AT3G56200 [Transmembrane amino acid transporter family protein] 0.217 -0.201
87 259398_at AT1G17700 PRA1.F1, prenylated RAB acceptor 1.F1 0.214 0.092
88 247318_at AT5G63990 [Inositol monophosphatase family protein] 0.207 -0.121
89 262133_at AT1G78000 SEL1, SELENATE RESISTANT 1, SULTR1;2, sulfate transporter 1;2 0.206 -0.273
90 258767_at AT3G10890 [Glycosyl hydrolase superfamily protein] -0.614 -0.053
91 246145_at AT5G19880 [Peroxidase superfamily protein] -0.604 0.139
92 251524_at AT3G58990 IPMI1, isopropylmalate isomerase 1 -0.549 -0.150
93 259197_at AT3G03670 [Peroxidase superfamily protein] -0.549 -0.062
94 249866_at AT5G23010 IMS3, 2-ISOPROPYLMALATE SYNTHASE 3, MAM1, methylthioalkylmalate synthase 1 -0.531 0.039
95 245444_at AT4G16740 ATTPS03, terpene synthase 03, TPS03, terpene synthase 03 -0.497 -0.023
96 256307_at AT1G30350 [Pectin lyase-like superfamily protein] -0.495 -0.291
97 245151_at AT2G47550 [Plant invertase/pectin methylesterase inhibitor superfamily] -0.487 -0.319
98 258516_at AT3G06490 AtMYB108, myb domain protein 108, BOS1, BOTRYTIS-SUSCEPTIBLE1, MYB108, myb domain protein 108 -0.482 -0.239
99 254550_at AT4G19690 ATIRT1, ARABIDOPSIS IRON-REGULATED TRANSPORTER 1, IRT1, iron-regulated transporter 1 -0.450 -0.068
100 255717_at AT4G00350 [MATE efflux family protein] -0.448 -0.439
101 267476_at AT2G02720 [Pectate lyase family protein] -0.434 -0.836
102 256787_at AT3G13790 ATBFRUCT1, ATCWINV1, ARABIDOPSIS THALIANA CELL WALL INVERTASE 1 -0.430 -0.001
103 265008_at AT1G61560 ATMLO6, MILDEW RESISTANCE LOCUS O 6, MLO6, MILDEW RESISTANCE LOCUS O 6 -0.428 -0.150
104 264499_at AT1G30795 [Glycine-rich protein family] -0.423 0.202
105 254914_at AT4G11290 [Peroxidase superfamily protein] -0.422 0.105
106 255276_at AT4G04930 DES-1-LIKE -0.412 -0.505
107 251620_at AT3G58060 [Cation efflux family protein] -0.406 -0.131
108 261385_at AT1G05450 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.402 0.015
109 264039_at AT2G03740 [late embryogenesis abundant domain-containing protein / LEA domain-containing protein] -0.399 0.188
110 252102_at AT3G50970 LTI30, LOW TEMPERATURE-INDUCED 30, XERO2 -0.394 -0.186
111 261528_at AT1G14420 AT59 -0.384 -0.694
112 245422_at AT4G17470 [alpha/beta-Hydrolases superfamily protein] -0.384 0.104
113 254687_at AT4G13770 CYP83A1, cytochrome P450, family 83, subfamily A, polypeptide 1, REF2, REDUCED EPIDERMAL FLUORESCENCE 2 -0.381 0.090
114 265121_at AT1G62560 FMO GS-OX3, flavin-monooxygenase glucosinolate S-oxygenase 3 -0.378 0.084
115 262817_at AT1G11770 [FAD-binding Berberine family protein] -0.370 -0.474
116 262651_at AT1G14100 FUT8, fucosyltransferase 8 -0.368 0.109
117 261499_at AT1G28430 CYP705A24, cytochrome P450, family 705, subfamily A, polypeptide 24 -0.364 -0.024
118 250251_at AT5G13670 UMAMIT15, Usually multiple acids move in and out Transporters 15 -0.364 -0.043
119 253240_at AT4G34510 KCS17, 3-ketoacyl-CoA synthase 17 -0.358 -0.404
120 247812_at AT5G58390 [Peroxidase superfamily protein] -0.357 0.105
121 246437_at AT5G17540 [HXXXD-type acyl-transferase family protein] -0.354 -0.012
122 248470_at AT5G50830 unknown -0.346 -0.728
123 245463_at AT4G17030 AT-EXPR, ATEXLB1, expansin-like B1, ATEXPR1, ATHEXP BETA 3.1, EXLB1, expansin-like B1, EXPR -0.346 -0.008
124 249760_at AT5G23960 ATTPS21, TPS21, terpene synthase 21 -0.337 0.252
125 264342_at AT1G12080 [Vacuolar calcium-binding protein-related] -0.336 -0.119
126 264987_at AT1G27030 unknown -0.335 0.013
127 249046_at AT5G44400 [FAD-binding Berberine family protein] -0.332 -0.133
128 250239_at AT5G13580 ABCG6, ATP-binding cassette G6 -0.329 -0.284
129 258468_at AT3G06070 unknown -0.323 -0.274
130 260553_at AT2G41800 unknown -0.321 -0.094
131 249541_at AT5G38130 [HXXXD-type acyl-transferase family protein] -0.321 0.017
132 255648_at AT4G00910 [Aluminium activated malate transporter family protein] -0.319 0.107
133 251012_at AT5G02580 unknown -0.316 -0.159
134 256319_at AT1G35910 TPPD, trehalose-6-phosphate phosphatase D -0.316 -0.312
135 248229_at AT5G53810 [O-methyltransferase family protein] -0.315 -0.299
136 247804_at AT5G58170 GDPDL7, Glycerophosphodiester phosphodiesterase (GDPD) like 7, SVL5, SHV3-like 5 -0.315 -0.484
137 251339_at AT3G60780 unknown -0.315 -0.428
138 249323_at AT5G40940 FLA20, putative fasciclin-like arabinogalactan protein 20 -0.313 0.048
139 266918_at AT2G45800 PLIM2a, PLIM2a -0.312 -0.427
140 259464_at AT1G18990 unknown -0.311 -0.874
141 261943_at AT1G80660 AHA9, H(+)-ATPase 9, HA9, H(+)-ATPase 9 -0.310 -0.532
142 246592_at AT5G14890 [NHL domain-containing protein] -0.309 -0.323
143 257130_at AT3G20210 DELTA-VPE, delta vacuolar processing enzyme, DELTAVPE, DELTA VACUOLAR PROCESSING ENZYME -0.309 0.042
144 257008_at AT3G14210 ESM1, epithiospecifier modifier 1 -0.307 0.326
145 265368_at AT2G13350 [Calcium-dependent lipid-binding (CaLB domain) family protein] -0.307 -0.467
146 263595_at AT2G01890 ATPAP8, PURPLE ACID PHOSPHATASE 8, PAP8, purple acid phosphatase 8 -0.304 -0.297
147 247424_at AT5G62850 AtSWEET5, AtVEX1, VEGETATIVE CELL EXPRESSED1, SWEET5 -0.303 -0.408
148 245036_at AT2G26410 Iqd4, IQ-domain 4 -0.302 -0.786
149 266901_at AT2G34600 JAZ7, jasmonate-zim-domain protein 7, TIFY5B -0.301 -0.020
150 246933_at AT5G25160 ZFP3, zinc finger protein 3 -0.298 -0.007
151 252140_at AT3G51070 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.296 -0.202
152 265127_at AT1G55560 sks14, SKU5 similar 14 -0.296 -0.520
153 263028_at AT1G24030 [Protein kinase superfamily protein] -0.294 0.003
154 254862_at AT4G12030 BASS5, BILE ACID:SODIUM SYMPORTER FAMILY PROTEIN 5, BAT5, bile acid transporter 5 -0.291 0.092
155 257399_at AT1G23690 unknown -0.290 -0.254
156 249867_at AT5G23020 IMS2, 2-isopropylmalate synthase 2, MAM-L, METHYLTHIOALKYMALATE SYNTHASE-LIKE, MAM3 -0.287 -0.090
157 257256_at AT3G21970 unknown -0.287 -0.244
158 262463_at AT1G50310 ATSTP9, SUGAR TRANSPORTER 9, STP9, sugar transporter 9 -0.286 -0.115
159 249481_at AT5G38900 [Thioredoxin superfamily protein] -0.283 0.139
160 254123_at AT4G24640 APPB1 -0.283 -0.446
161 256833_at AT3G22910 [ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein] -0.283 -0.392
162 251595_at AT3G57620 [glyoxal oxidase-related protein] -0.281 0.210
163 251250_at AT3G62180 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.277 -0.420
164 253151_at AT4G35670 [Pectin lyase-like superfamily protein] -0.276 -0.102
165 258748_at AT3G05930 GLP8, germin-like protein 8 -0.275 -0.372
166 264993_at AT1G67290 GLOX1, glyoxal oxidase 1 -0.274 -0.416
167 258671_at AT3G08560 VHA-E2, vacuolar H+-ATPase subunit E isoform 2 -0.273 -0.063
168 260773_at AT1G78440 ATGA2OX1, Arabidopsis thaliana gibberellin 2-oxidase 1, GA2OX1, gibberellin 2-oxidase 1 -0.272 -0.056
169 263320_at AT2G47180 AtGolS1, galactinol synthase 1, GolS1, galactinol synthase 1 -0.271 0.036
170 260888_at AT1G29140 [Pollen Ole e 1 allergen and extensin family protein] -0.270 -0.385
171 267431_at AT2G34870 MEE26, maternal effect embryo arrest 26 -0.270 0.145
172 267449_at AT2G33690 [Late embryogenesis abundant protein, group 6] -0.269 -0.072
173 248932_at AT5G46050 AtNPF5.2, ATPTR3, ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 3, NPF5.2, NRT1/ PTR family 5.2, PTR3, peptide transporter 3 -0.268 -0.079
174 257439_at AT2G17000 [Mechanosensitive ion channel family protein] -0.268 0.196
175 261244_at AT1G20150 [Subtilisin-like serine endopeptidase family protein] -0.267 0.211
176 249852_at AT5G23270 ATSTP11, SUGAR TRANSPORTER 11, STP11, sugar transporter 11 -0.266 -0.592
177 245088_at AT2G39850 [Subtilisin-like serine endopeptidase family protein] -0.264 -0.032