4.0:Information of module
nd-1 mock 48 hpi
In comparison with Laer pretreat GA Flg22 1h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0015979 photosynthesis BP 1.533e-15
GO:0006364 rRNA processing BP 6.699e-13
GO:0016072 rRNA metabolic process BP 6.699e-13
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0015698 inorganic anion transport BP 3.675e-07
GO:0010106 cellular response to iron ion starvation BP 1.169e-06
GO:0000041 transition metal ion transport BP 1.219e-06
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
nd-1 mock 48 hpi		 Log2 signal ratio
Laer pretreat GA Flg22 1h
1 263098_at AT2G16005 [MD-2-related lipid recognition domain-containing protein] 0.466 0.094
2 260693_at AT1G32450 AtNPF7.3, NPF7.3, NRT1/ PTR family 7.3, NRT1.5, nitrate transporter 1.5 0.418 -0.072
3 250073_at AT5G17170 ENH1, enhancer of sos3-1 0.414 -0.277
4 247866_at AT5G57550 XTH25, xyloglucan endotransglucosylase/hydrolase 25, XTR3, xyloglucan endotransglycosylase 3 0.402 -0.431
5 258277_at AT3G26830 CYP71B15, PAD3, PHYTOALEXIN DEFICIENT 3 0.382 0.335
6 250474_at AT5G10230 ANN7, ANNEXIN 7, ANNAT7, annexin 7 0.367 0.041
7 252463_at AT3G47070 [LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope] 0.335 -0.197
8 250099_at AT5G17300 RVE1, REVEILLE 1 0.318 0.034
9 252462_at AT3G47250 unknown 0.316 0.075
10 254586_at AT4G19510 [Disease resistance protein (TIR-NBS-LRR class)] 0.300 -0.005
11 246596_at AT5G14740 BETA CA2, BETA CARBONIC ANHYDRASE 2, CA18, CARBONIC ANHYDRASE 18, CA2, carbonic anhydrase 2 0.286 -0.167
12 261218_at AT1G20020 ATLFNR2, LEAF FNR 2, FNR2, ferredoxin-NADP(+)-oxidoreductase 2, LFNR2, leaf-type chloroplast-targeted FNR 2 0.285 -0.004
13 264815_at AT1G03620 [ELMO/CED-12 family protein] 0.283 0.109
14 246520_at AT5G15790 [RING/U-box superfamily protein] 0.262 -0.179
15 246475_at AT5G16720 MyoB3, myosin binding protein 3 0.260 0.011
16 250541_at AT5G09520 PELPK2, Pro-Glu-Leu|Ile|Val-Pro-Lys 2 0.257 0.099
17 246518_at AT5G15770 AtGNA1, glucose-6-phosphate acetyltransferase 1, GNA1, glucose-6-phosphate acetyltransferase 1 0.255 0.113
18 246493_at AT5G16180 ATCRS1, ARABIDOPSIS ORTHOLOG OF MAIZE CHLOROPLAST SPLICING FACTOR CRS1, CRS1, ortholog of maize chloroplast splicing factor CRS1 0.252 -0.389
19 264525_at AT1G10060 ATBCAT-1, branched-chain amino acid transaminase 1, BCAT-1, branched-chain amino acid transaminase 1, BCAT1, branched-chain amino acid transferase 1 0.228 -0.204
20 264959_at AT1G77090 [Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein] 0.224 -0.283
21 246509_at AT5G16715 EMB2247, embryo defective 2247 0.221 -0.305
22 250133_at AT5G16400 ATF2, TRXF2, thioredoxin F2 0.220 -0.176
23 250078_at AT5G16690 ATORC3, ORC3, origin recognition complex subunit 3 0.219 0.094
24 250117_at AT5G16440 IPP1, isopentenyl diphosphate isomerase 1 0.215 0.185
25 245506_at AT4G15700 [Thioredoxin superfamily protein] 0.213 -0.647
26 246510_at AT5G15410 ATCNGC2, CYCLIC NUCLEOTIDE-GATED CHANNEL 2, CNGC2, CYCLIC NUCLEOTIDE GATED CHANNEL 2, DND1, DEFENSE NO DEATH 1 0.213 -0.537
27 250168_at AT5G15320 unknown 0.208 0.110
28 249253_at AT5G42060 [DEK, chromatin associated protein] 0.208 0.065
29 260471_at AT1G11070 unknown 0.208 0.035
30 250104_at AT5G16610 unknown 0.205 -0.222
31 246450_at AT5G16820 ATHSF3, ARABIDOPSIS HEAT SHOCK FACTOR 3, ATHSFA1B, ARABIDOPSIS THALIANA CLASS A HEAT SHOCK FACTOR 1B, HSF3, heat shock factor 3, HSFA1B, CLASS A HEAT SHOCK FACTOR 1B 0.202 0.047
32 250107_at AT5G15330 ATSPX4, ARABIDOPSIS THALIANA SPX DOMAIN GENE 4, SPX4, SPX domain gene 4 0.201 -0.046
33 255111_at AT4G08780 [Peroxidase superfamily protein] 0.199 0.683
34 266392_at AT2G41280 ATM10, M10 0.199 -0.214
35 246417_at AT5G16990 [Zinc-binding dehydrogenase family protein] 0.198 -0.116
36 254747_at AT4G13020 MHK 0.196 -0.020
37 250115_at AT5G16420 [Pentatricopeptide repeat (PPR-like) superfamily protein] 0.191 0.131
38 246517_at AT5G15760 PSRP3/2, plastid-specific ribosomal protein 3/2 0.191 0.000
39 250127_at AT5G16380 unknown 0.190 0.199
40 249895_at AT5G22500 FAR1, fatty acid reductase 1 0.188 0.108
41 267526_at AT2G30570 PSBW, photosystem II reaction center W 0.186 -0.051
42 249694_at AT5G35790 G6PD1, glucose-6-phosphate dehydrogenase 1 0.185 -0.339
43 250131_at AT5G16550 unknown 0.184 -0.014
44 250164_at AT5G15280 [Pentatricopeptide repeat (PPR) superfamily protein] 0.184 -0.026
45 245044_at AT2G26500 [cytochrome b6f complex subunit (petM), putative] 0.183 -0.081
46 251885_at AT3G54050 HCEF1, high cyclic electron flow 1 0.183 -0.416
47 262897_at AT1G59840 CCB4, cofactor assembly of complex C 0.182 -0.305
48 259197_at AT3G03670 [Peroxidase superfamily protein] -0.548 0.124
49 248556_at AT5G50350 unknown -0.412 0.250
50 255516_at AT4G02270 RHS13, root hair specific 13 -0.373 0.120
51 256073_at AT1G18100 E12A11, MFT, MOTHER OF FT AND TFL1 -0.318 0.120
52 262719_at AT1G43590 unknown -0.308 0.021
53 254044_at AT4G25820 ATXTH14, XTH14, xyloglucan endotransglucosylase/hydrolase 14, XTR9, xyloglucan endotransglycosylase 9 -0.286 0.029
54 248979_at AT5G45080 AtPP2-A6, phloem protein 2-A6, PP2-A6, phloem protein 2-A6 -0.277 0.085
55 255360_at AT4G03960 AtPFA-DSP4, PFA-DSP4, plant and fungi atypical dual-specificity phosphatase 4 -0.260 -0.002
56 267576_at AT2G30640 MUG2, MUSTANG 2 -0.259 0.153
57 264543_at AT1G55790 [FUNCTIONS IN: metal ion binding] -0.240 0.536
58 249377_at AT5G40690 unknown -0.240 0.002
59 252502_at AT3G46900 COPT2, copper transporter 2 -0.239 -0.174
60 249617_at AT5G37450 [Leucine-rich repeat protein kinase family protein] -0.238 0.083
61 267409_at AT2G34910 unknown -0.233 0.084
62 247331_at AT5G63530 ATFP3, ARABIDOPSIS THALIANA FARNESYLATED PROTEIN 3, FP3, farnesylated protein 3 -0.228 -0.217
63 252205_at AT3G50350 unknown -0.223 0.062
64 248770_at AT5G47740 [Adenine nucleotide alpha hydrolases-like superfamily protein] -0.216 0.181
65 245172_at AT2G47540 [Pollen Ole e 1 allergen and extensin family protein] -0.201 0.153
66 267080_at AT2G41190 [Transmembrane amino acid transporter family protein] -0.196 0.059
67 247717_at AT5G59320 LTP3, lipid transfer protein 3 -0.194 0.046
68 264893_at AT1G23140 [Calcium-dependent lipid-binding (CaLB domain) family protein] -0.188 -0.005
69 246842_at AT5G26731 unknown -0.186 0.112
70 257432_at AT2G21850 [Cysteine/Histidine-rich C1 domain family protein] -0.185 0.312
71 257280_at AT3G14440 ATNCED3, NCED3, nine-cis-epoxycarotenoid dioxygenase 3, SIS7, SUGAR INSENSITIVE 7, STO1, SALT TOLERANT 1 -0.184 0.220
72 250172_at AT5G14330 unknown -0.181 0.143
73 265293_at AT2G14020 unknown -0.177 0.042
74 256900_at AT3G24670 [Pectin lyase-like superfamily protein] -0.176 0.140
75 262244_at AT1G48260 CIPK17, CBL-interacting protein kinase 17, SnRK3.21, SNF1-RELATED PROTEIN KINASE 3.21 -0.176 0.218
76 247094_at AT5G66280 GMD1, GDP-D-mannose 4,6-dehydratase 1 -0.174 0.043
77 259864_at AT1G72800 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.174 -0.036
78 258983_at AT3G08860 PYD4, PYRIMIDINE 4 -0.174 -0.044
79 266941_at AT2G18980 [Peroxidase superfamily protein] -0.170 0.125
80 256100_at AT1G13750 [Purple acid phosphatases superfamily protein] -0.168 -0.017
81 258868_at AT3G03110 CRM1B, XPO1B, exportin 1B -0.165 0.069
82 260494_at AT2G41820 PXC3, PXY/TDR-correlated 3 -0.164 0.101
83 260994_at AT1G12130 [Flavin-binding monooxygenase family protein] -0.159 0.035
84 251755_at AT3G55790 unknown -0.158 0.960
85 245884_at AT5G09300 [Thiamin diphosphate-binding fold (THDP-binding) superfamily protein] -0.157 -0.021
86 265646_at AT2G27360 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.153 0.008
87 246135_at AT5G20885 [RING/U-box superfamily protein] -0.147 -0.127
88 252311_at AT3G49370 [Calcium-dependent protein kinase (CDPK) family protein] -0.146 0.335
89 265275_at AT2G28440 [proline-rich family protein] -0.145 0.045
90 262703_at AT1G16510 SAUR41, SMALL AUXIN UPREGULATED 41 -0.145 -0.197
91 254744_at AT4G13345 MEE55, maternal effect embryo arrest 55 -0.143 0.063
92 251106_at AT5G01500 TAAC, thylakoid ATP/ADP carrier -0.142 0.295
93 259014_at AT3G07320 [O-Glycosyl hydrolases family 17 protein] -0.142 0.215