4.0:Information of module
nd-1 mock 48 hpi
In comparison with mutant-line409 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0015979 photosynthesis BP 1.533e-15
GO:0006364 rRNA processing BP 6.699e-13
GO:0016072 rRNA metabolic process BP 6.699e-13
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0015698 inorganic anion transport BP 3.675e-07
GO:0010106 cellular response to iron ion starvation BP 1.169e-06
GO:0000041 transition metal ion transport BP 1.219e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
nd-1 mock 48 hpi		 Log2 signal ratio
mutant-line409
1 263098_at AT2G16005 [MD-2-related lipid recognition domain-containing protein] 0.466 -0.126
2 260693_at AT1G32450 AtNPF7.3, NPF7.3, NRT1/ PTR family 7.3, NRT1.5, nitrate transporter 1.5 0.418 0.031
3 250073_at AT5G17170 ENH1, enhancer of sos3-1 0.414 0.022
4 247866_at AT5G57550 XTH25, xyloglucan endotransglucosylase/hydrolase 25, XTR3, xyloglucan endotransglycosylase 3 0.402 0.146
5 258277_at AT3G26830 CYP71B15, PAD3, PHYTOALEXIN DEFICIENT 3 0.382 -0.078
6 250474_at AT5G10230 ANN7, ANNEXIN 7, ANNAT7, annexin 7 0.367 0.111
7 252463_at AT3G47070 [LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope] 0.335 0.033
8 250099_at AT5G17300 RVE1, REVEILLE 1 0.318 -0.077
9 252462_at AT3G47250 unknown 0.316 0.174
10 254586_at AT4G19510 [Disease resistance protein (TIR-NBS-LRR class)] 0.300 -0.039
11 246596_at AT5G14740 BETA CA2, BETA CARBONIC ANHYDRASE 2, CA18, CARBONIC ANHYDRASE 18, CA2, carbonic anhydrase 2 0.286 0.023
12 261218_at AT1G20020 ATLFNR2, LEAF FNR 2, FNR2, ferredoxin-NADP(+)-oxidoreductase 2, LFNR2, leaf-type chloroplast-targeted FNR 2 0.285 0.037
13 264815_at AT1G03620 [ELMO/CED-12 family protein] 0.283 -0.026
14 246520_at AT5G15790 [RING/U-box superfamily protein] 0.262 0.086
15 246475_at AT5G16720 MyoB3, myosin binding protein 3 0.260 -0.067
16 250541_at AT5G09520 PELPK2, Pro-Glu-Leu|Ile|Val-Pro-Lys 2 0.257 0.012
17 246518_at AT5G15770 AtGNA1, glucose-6-phosphate acetyltransferase 1, GNA1, glucose-6-phosphate acetyltransferase 1 0.255 0.055
18 246493_at AT5G16180 ATCRS1, ARABIDOPSIS ORTHOLOG OF MAIZE CHLOROPLAST SPLICING FACTOR CRS1, CRS1, ortholog of maize chloroplast splicing factor CRS1 0.252 -0.091
19 264525_at AT1G10060 ATBCAT-1, branched-chain amino acid transaminase 1, BCAT-1, branched-chain amino acid transaminase 1, BCAT1, branched-chain amino acid transferase 1 0.228 -0.042
20 264959_at AT1G77090 [Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein] 0.224 0.016
21 246509_at AT5G16715 EMB2247, embryo defective 2247 0.221 0.002
22 250133_at AT5G16400 ATF2, TRXF2, thioredoxin F2 0.220 -0.026
23 250078_at AT5G16690 ATORC3, ORC3, origin recognition complex subunit 3 0.219 -0.021
24 250117_at AT5G16440 IPP1, isopentenyl diphosphate isomerase 1 0.215 0.026
25 245506_at AT4G15700 [Thioredoxin superfamily protein] 0.213 0.009
26 246510_at AT5G15410 ATCNGC2, CYCLIC NUCLEOTIDE-GATED CHANNEL 2, CNGC2, CYCLIC NUCLEOTIDE GATED CHANNEL 2, DND1, DEFENSE NO DEATH 1 0.213 0.054
27 250168_at AT5G15320 unknown 0.208 0.108
28 249253_at AT5G42060 [DEK, chromatin associated protein] 0.208 0.063
29 260471_at AT1G11070 unknown 0.208 -0.010
30 250104_at AT5G16610 unknown 0.205 -0.040
31 246450_at AT5G16820 ATHSF3, ARABIDOPSIS HEAT SHOCK FACTOR 3, ATHSFA1B, ARABIDOPSIS THALIANA CLASS A HEAT SHOCK FACTOR 1B, HSF3, heat shock factor 3, HSFA1B, CLASS A HEAT SHOCK FACTOR 1B 0.202 -0.007
32 250107_at AT5G15330 ATSPX4, ARABIDOPSIS THALIANA SPX DOMAIN GENE 4, SPX4, SPX domain gene 4 0.201 -0.032
33 255111_at AT4G08780 [Peroxidase superfamily protein] 0.199 0.016
34 266392_at AT2G41280 ATM10, M10 0.199 0.016
35 246417_at AT5G16990 [Zinc-binding dehydrogenase family protein] 0.198 -0.054
36 254747_at AT4G13020 MHK 0.196 0.018
37 250115_at AT5G16420 [Pentatricopeptide repeat (PPR-like) superfamily protein] 0.191 -0.012
38 246517_at AT5G15760 PSRP3/2, plastid-specific ribosomal protein 3/2 0.191 0.024
39 250127_at AT5G16380 unknown 0.190 0.012
40 249895_at AT5G22500 FAR1, fatty acid reductase 1 0.188 0.097
41 267526_at AT2G30570 PSBW, photosystem II reaction center W 0.186 0.013
42 249694_at AT5G35790 G6PD1, glucose-6-phosphate dehydrogenase 1 0.185 0.002
43 250131_at AT5G16550 unknown 0.184 0.015
44 250164_at AT5G15280 [Pentatricopeptide repeat (PPR) superfamily protein] 0.184 -0.008
45 245044_at AT2G26500 [cytochrome b6f complex subunit (petM), putative] 0.183 0.017
46 251885_at AT3G54050 HCEF1, high cyclic electron flow 1 0.183 0.029
47 262897_at AT1G59840 CCB4, cofactor assembly of complex C 0.182 -0.014
48 259197_at AT3G03670 [Peroxidase superfamily protein] -0.548 -0.025
49 248556_at AT5G50350 unknown -0.412 0.066
50 255516_at AT4G02270 RHS13, root hair specific 13 -0.373 0.092
51 256073_at AT1G18100 E12A11, MFT, MOTHER OF FT AND TFL1 -0.318 0.057
52 262719_at AT1G43590 unknown -0.308 0.072
53 254044_at AT4G25820 ATXTH14, XTH14, xyloglucan endotransglucosylase/hydrolase 14, XTR9, xyloglucan endotransglycosylase 9 -0.286 0.076
54 248979_at AT5G45080 AtPP2-A6, phloem protein 2-A6, PP2-A6, phloem protein 2-A6 -0.277 0.062
55 255360_at AT4G03960 AtPFA-DSP4, PFA-DSP4, plant and fungi atypical dual-specificity phosphatase 4 -0.260 -0.007
56 267576_at AT2G30640 MUG2, MUSTANG 2 -0.259 -0.021
57 264543_at AT1G55790 [FUNCTIONS IN: metal ion binding] -0.240 0.015
58 249377_at AT5G40690 unknown -0.240 -0.016
59 252502_at AT3G46900 COPT2, copper transporter 2 -0.239 -0.015
60 249617_at AT5G37450 [Leucine-rich repeat protein kinase family protein] -0.238 0.058
61 267409_at AT2G34910 unknown -0.233 0.043
62 247331_at AT5G63530 ATFP3, ARABIDOPSIS THALIANA FARNESYLATED PROTEIN 3, FP3, farnesylated protein 3 -0.228 0.010
63 252205_at AT3G50350 unknown -0.223 0.053
64 248770_at AT5G47740 [Adenine nucleotide alpha hydrolases-like superfamily protein] -0.216 -0.084
65 245172_at AT2G47540 [Pollen Ole e 1 allergen and extensin family protein] -0.201 0.034
66 267080_at AT2G41190 [Transmembrane amino acid transporter family protein] -0.196 0.003
67 247717_at AT5G59320 LTP3, lipid transfer protein 3 -0.194 0.102
68 264893_at AT1G23140 [Calcium-dependent lipid-binding (CaLB domain) family protein] -0.188 0.026
69 246842_at AT5G26731 unknown -0.186 -0.032
70 257432_at AT2G21850 [Cysteine/Histidine-rich C1 domain family protein] -0.185 -0.001
71 257280_at AT3G14440 ATNCED3, NCED3, nine-cis-epoxycarotenoid dioxygenase 3, SIS7, SUGAR INSENSITIVE 7, STO1, SALT TOLERANT 1 -0.184 0.107
72 250172_at AT5G14330 unknown -0.181 0.062
73 265293_at AT2G14020 unknown -0.177 0.079
74 256900_at AT3G24670 [Pectin lyase-like superfamily protein] -0.176 -0.005
75 262244_at AT1G48260 CIPK17, CBL-interacting protein kinase 17, SnRK3.21, SNF1-RELATED PROTEIN KINASE 3.21 -0.176 -0.097
76 247094_at AT5G66280 GMD1, GDP-D-mannose 4,6-dehydratase 1 -0.174 0.099
77 259864_at AT1G72800 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.174 0.065
78 258983_at AT3G08860 PYD4, PYRIMIDINE 4 -0.174 -0.129
79 266941_at AT2G18980 [Peroxidase superfamily protein] -0.170 0.001
80 256100_at AT1G13750 [Purple acid phosphatases superfamily protein] -0.168 -0.075
81 258868_at AT3G03110 CRM1B, XPO1B, exportin 1B -0.165 0.009
82 260494_at AT2G41820 PXC3, PXY/TDR-correlated 3 -0.164 -0.008
83 260994_at AT1G12130 [Flavin-binding monooxygenase family protein] -0.159 0.048
84 251755_at AT3G55790 unknown -0.158 -0.050
85 245884_at AT5G09300 [Thiamin diphosphate-binding fold (THDP-binding) superfamily protein] -0.157 0.053
86 265646_at AT2G27360 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.153 -0.021
87 246135_at AT5G20885 [RING/U-box superfamily protein] -0.147 0.013
88 252311_at AT3G49370 [Calcium-dependent protein kinase (CDPK) family protein] -0.146 0.042
89 265275_at AT2G28440 [proline-rich family protein] -0.145 0.093
90 262703_at AT1G16510 SAUR41, SMALL AUXIN UPREGULATED 41 -0.145 0.042
91 254744_at AT4G13345 MEE55, maternal effect embryo arrest 55 -0.143 -0.025
92 251106_at AT5G01500 TAAC, thylakoid ATP/ADP carrier -0.142 0.003
93 259014_at AT3G07320 [O-Glycosyl hydrolases family 17 protein] -0.142 0.090