4.0:Information of module
nd-1 V. longisporum-inoculated 48 hpi
In comparison with NJ15 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0019637 organophosphate metabolic process BP 9.621e-06
GO:0010264 myo-inositol hexakisphosphate biosynthet... BP 6.240e-05
GO:0032958 inositol phosphate biosynthetic process BP 6.240e-05
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009220 pyrimidine ribonucleotide biosynthetic p... BP 2.536e-11
GO:0009165 nucleotide biosynthetic process BP 3.133e-11
GO:1901293 nucleoside phosphate biosynthetic proces... BP 3.574e-11
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
nd-1 V. longisporum-inoculated 48 hpi		 Log2 signal ratio
NJ15
1 266222_at AT2G28780 unknown 0.682 -0.085
2 260693_at AT1G32450 AtNPF7.3, NPF7.3, NRT1/ PTR family 7.3, NRT1.5, nitrate transporter 1.5 0.658 0.003
3 247866_at AT5G57550 XTH25, xyloglucan endotransglucosylase/hydrolase 25, XTR3, xyloglucan endotransglycosylase 3 0.584 0.001
4 250099_at AT5G17300 RVE1, REVEILLE 1 0.413 -0.036
5 255648_at AT4G00910 [Aluminium activated malate transporter family protein] 0.380 0.009
6 252167_at AT3G50560 [NAD(P)-binding Rossmann-fold superfamily protein] 0.360 0.030
7 266299_at AT2G29450 AT103-1A, ATGSTU1, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 1, ATGSTU5, glutathione S-transferase tau 5, GSTU5, glutathione S-transferase tau 5 0.358 0.162
8 263098_at AT2G16005 [MD-2-related lipid recognition domain-containing protein] 0.306 0.058
9 251298_at AT3G62040 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] 0.284 -0.043
10 263374_at AT2G20560 [DNAJ heat shock family protein] 0.271 0.497
11 251869_at AT3G54500 LNK2, night light-inducible and clock-regulated 2 0.264 -0.113
12 246462_at AT5G16940 [carbon-sulfur lyases] 0.257 -0.102
13 256751_at AT3G27170 ATCLC-B, CLC-B, chloride channel B 0.255 -0.031
14 255575_at AT4G01430 UMAMIT29, Usually multiple acids move in and out Transporters 29 0.254 -0.033
15 246494_at AT5G16190 ATCSLA11, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE LIKE A11, CSLA11, cellulose synthase like A11 0.253 -0.060
16 248706_at AT5G48530 unknown 0.251 0.030
17 250095_at AT5G17230 PSY, PHYTOENE SYNTHASE 0.246 0.022
18 250127_at AT5G16380 unknown 0.241 -0.002
19 253619_at AT4G30460 [glycine-rich protein] 0.238 0.085
20 250107_at AT5G15330 ATSPX4, ARABIDOPSIS THALIANA SPX DOMAIN GENE 4, SPX4, SPX domain gene 4 0.237 -0.047
21 246450_at AT5G16820 ATHSF3, ARABIDOPSIS HEAT SHOCK FACTOR 3, ATHSFA1B, ARABIDOPSIS THALIANA CLASS A HEAT SHOCK FACTOR 1B, HSF3, heat shock factor 3, HSFA1B, CLASS A HEAT SHOCK FACTOR 1B 0.227 0.005
22 246518_at AT5G15770 AtGNA1, glucose-6-phosphate acetyltransferase 1, GNA1, glucose-6-phosphate acetyltransferase 1 0.223 -0.088
23 265740_at AT2G01150 RHA2B, RING-H2 finger protein 2B 0.222 0.085
24 250117_at AT5G16440 IPP1, isopentenyl diphosphate isomerase 1 0.222 -0.006
25 254562_at AT4G19230 CYP707A1, cytochrome P450, family 707, subfamily A, polypeptide 1 0.217 0.102
26 246486_at AT5G15910 [NAD(P)-binding Rossmann-fold superfamily protein] 0.215 -0.015
27 250102_at AT5G16590 LRR1, Leucine rich repeat protein 1 0.212 0.011
28 250113_at AT5G16320 FRL1, FRIGIDA like 1 0.211 0.003
29 253724_at AT4G29285 LCR24, low-molecular-weight cysteine-rich 24 0.208 0.023
30 246417_at AT5G16990 [Zinc-binding dehydrogenase family protein] 0.208 -0.027
31 250164_at AT5G15280 [Pentatricopeptide repeat (PPR) superfamily protein] 0.207 -0.015
32 246482_at AT5G15930 PAM1, plant adhesion molecule 1 0.204 -0.019
33 261335_at AT1G44800 SIAR1, Siliques Are Red 1, UMAMIT18, Usually multiple acids move in and out Transporters 18 0.204 -0.003
34 256796_at AT3G22210 unknown 0.204 -0.077
35 254747_at AT4G13020 MHK 0.199 -0.014
36 250122_at AT5G16520 unknown 0.199 -0.056
37 246492_at AT5G16140 [Peptidyl-tRNA hydrolase family protein] 0.195 0.004
38 254034_at AT4G25960 ABCB2, ATP-binding cassette B2, PGP2, P-glycoprotein 2 0.195 -0.012
39 244901_at ATMG00640 ORF25 0.194 -0.004
40 250074_at AT5G17310 AtUGP2, UDP-GLUCOSE PYROPHOSPHORYLASE 2, UGP2, UDP-glucose pyrophosphorylase 2 0.192 -0.040
41 254396_at AT4G21680 AtNPF7.2, NPF7.2, NRT1/ PTR family 7.2, NRT1.8, NITRATE TRANSPORTER 1.8 0.191 0.062
42 246483_at AT5G16000 AtNIK1, NIK1, NSP-interacting kinase 1 0.190 -0.025
43 244950_at ATMG00160 COX2, cytochrome oxidase 2 0.189 -0.014
44 246554_at AT5G15450 APG6, ALBINO AND PALE GREEN 6, AtCLPB3, CLPB-P, CASEIN LYTIC PROTEINASE B-P, CLPB3, casein lytic proteinase B3 0.189 0.020
45 246476_at AT5G16730 [LOCATED IN: chloroplast] 0.186 -0.051
46 246478_at AT5G15980 [Pentatricopeptide repeat (PPR) superfamily protein] 0.185 0.009
47 246561_at AT5G15570 [Bromodomain transcription factor] 0.184 -0.018
48 246553_at AT5G15440 EDL1, EID1-like 1 0.184 0.020
49 246513_at AT5G15680 [ARM repeat superfamily protein] 0.183 -0.019
50 246422_at AT5G17060 ARFB1B, ADP-ribosylation factor B1B, ATARFB1B, ADP-ribosylation factor B1B 0.182 -0.025
51 246493_at AT5G16180 ATCRS1, ARABIDOPSIS ORTHOLOG OF MAIZE CHLOROPLAST SPLICING FACTOR CRS1, CRS1, ortholog of maize chloroplast splicing factor CRS1 0.180 0.016
52 246449_at AT5G16810 [Protein kinase superfamily protein] 0.180 -0.022
53 246453_at AT5G16830 ATPEP12, ATSYP21, PEP12, PEP12P, SYP21, syntaxin of plants 21 0.178 0.030
54 250563_at AT5G08050 unknown 0.177 0.009
55 246515_at AT5G15710 [Galactose oxidase/kelch repeat superfamily protein] 0.175 -0.040
56 255149_at AT4G08150 BP, BREVIPEDICELLUS, BP1, BREVIPEDICELLUS 1, KNAT1, KNOTTED-like from Arabidopsis thaliana 0.174 0.015
57 246539_at AT5G15460 MUB2, membrane-anchored ubiquitin-fold protein 2 0.174 -0.030
58 247922_at AT5G57500 [Galactosyltransferase family protein] 0.174 0.005
59 251755_at AT3G55790 unknown -0.704 -0.017
60 261020_at AT1G26390 [FAD-binding Berberine family protein] -0.570 0.120
61 266469_at AT2G31180 ATMYB14, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 14, MYB14, myb domain protein 14, MYB14AT -0.388 0.002
62 248556_at AT5G50350 unknown -0.383 -0.038
63 259028_at AT3G09290 TAC1, telomerase activator1 -0.348 -0.050
64 260973_at AT1G53490 HEI10, homolog of human HEI10 ( Enhancer of cell Invasion No.10) -0.335 0.007
65 252414_at AT3G47420 AtG3Pp1, Glycerol-3-phosphate permease 1, ATPS3, phosphate starvation-induced gene 3, G3Pp1, Glycerol-3-phosphate permease 1, PS3, phosphate starvation-induced gene 3 -0.331 0.010
66 250142_at AT5G14650 [Pectin lyase-like superfamily protein] -0.303 -0.003
67 256073_at AT1G18100 E12A11, MFT, MOTHER OF FT AND TFL1 -0.292 0.002
68 262719_at AT1G43590 unknown -0.286 -0.024
69 262586_at AT1G15480 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.281 0.062
70 266118_at AT2G02130 LCR68, low-molecular-weight cysteine-rich 68, PDF2.3 -0.256 -0.001
71 260770_at AT1G49200 [RING/U-box superfamily protein] -0.254 -0.100
72 253947_at AT4G26760 MAP65-2, microtubule-associated protein 65-2 -0.227 -0.046
73 251432_at AT3G59820 AtLETM1, LETM1, leucine zipper-EF-hand-containing transmembrane protein 1 -0.220 0.067
74 259481_at AT1G18970 GLP4, germin-like protein 4 -0.216 0.005
75 249588_at AT5G37790 [Protein kinase superfamily protein] -0.215 -0.040
76 257891_at AT3G17170 RFC3, REGULATOR OF FATTY-ACID COMPOSITION 3 -0.212 0.041
77 264562_at AT1G55760 [BTB/POZ domain-containing protein] -0.209 0.006
78 249911_at AT5G22740 ATCSLA02, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE-LIKE A02, ATCSLA2, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE-LIKE A2, CSLA02, cellulose synthase-like A02, CSLA2, CELLULOSE SYNTHASE-LIKE A 2 -0.204 -0.022
79 260803_at AT1G78340 ATGSTU22, glutathione S-transferase TAU 22, GSTU22, glutathione S-transferase TAU 22 -0.203 0.004
80 249464_at AT5G39710 EMB2745, EMBRYO DEFECTIVE 2745 -0.200 0.044
81 257465_at AT1G13040 [Pentatricopeptide repeat (PPR-like) superfamily protein] -0.200 -0.025
82 266865_at AT2G29980 AtFAD3, FAD3, fatty acid desaturase 3 -0.200 -0.023
83 249426_at AT5G39840 [ATP-dependent RNA helicase, mitochondrial, putative] -0.195 0.051
84 255360_at AT4G03960 AtPFA-DSP4, PFA-DSP4, plant and fungi atypical dual-specificity phosphatase 4 -0.194 0.024
85 252447_at AT3G47040 [Glycosyl hydrolase family protein] -0.194 0.023
86 246282_at AT4G36580 [AAA-type ATPase family protein] -0.194 0.043
87 254112_at AT4G24970 [Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein] -0.191 -0.063
88 254318_at AT4G22530 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.186 -0.009
89 249377_at AT5G40690 unknown -0.185 0.012
90 253492_at AT4G31810 [ATP-dependent caseinolytic (Clp) protease/crotonase family protein] -0.183 0.010
91 260331_at AT1G80270 PPR596, PENTATRICOPEPTIDE REPEAT 596 -0.181 0.024
92 255543_at AT4G01870 [tolB protein-related] -0.181 0.025
93 267576_at AT2G30640 MUG2, MUSTANG 2 -0.181 0.015
94 253131_at AT4G35550 ATWOX13, HB-4, WOX13, WUSCHEL related homeobox 13 -0.179 0.002
95 250258_at AT5G13790 AGL15, AGAMOUS-like 15 -0.179 -0.038
96 250204_at AT5G13990 ATEXO70C2, exocyst subunit exo70 family protein C2, EXO70C2, exocyst subunit exo70 family protein C2 -0.178 0.001
97 250661_at AT5G07030 [Eukaryotic aspartyl protease family protein] -0.177 0.001
98 248486_at AT5G51060 ATRBOHC, A. THALIANA RESPIRATORY BURST OXIDASE HOMOLOG C, RBOHC, RESPIRATORY BURST OXIDASE HOMOLOG C, RHD2, ROOT HAIR DEFECTIVE 2 -0.172 0.038
99 261240_at AT1G32940 ATSBT3.5, SBT3.5 -0.171 0.026
100 248132_at AT5G54840 ATSGP1, SGP1 -0.170 0.009
101 262943_at AT1G79470 [Aldolase-type TIM barrel family protein] -0.170 -0.001
102 266687_at AT2G19670 ATPRMT1A, ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 1A, PRMT1A, protein arginine methyltransferase 1A -0.170 -0.022
103 254340_at AT4G22120 [ERD (early-responsive to dehydration stress) family protein] -0.167 0.015
104 251401_at AT3G60270 [Cupredoxin superfamily protein] -0.162 0.062
105 254543_at AT4G19810 ChiC, class V chitinase -0.155 0.044
106 250679_at AT5G06550 JMJ22, Jumonji domain-containing protein 22 -0.154 0.027
107 245930_at AT5G09240 [ssDNA-binding transcriptional regulator] -0.153 -0.055
108 255252_at AT4G04990 unknown -0.150 0.037
109 264893_at AT1G23140 [Calcium-dependent lipid-binding (CaLB domain) family protein] -0.149 -0.036
110 246850_at AT5G26860 LON1, lon protease 1, LON_ARA_ARA -0.148 0.115
111 265082_at AT1G03830 [guanylate-binding family protein] -0.148 0.015
112 261463_at AT1G07740 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.146 0.031
113 250252_at AT5G13750 ZIFL1, zinc induced facilitator-like 1 -0.145 0.037
114 252001_at AT3G52750 FTSZ2-2 -0.144 0.020
115 245164_at AT2G33210 HSP60-2, heat shock protein 60-2 -0.143 0.033