4.0:Information of module
LTN014-2 aza-dc+TSA
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0015706 nitrate transport BP 1.335e-04
GO:0010167 response to nitrate BP 3.940e-04
GO:0006820 anion transport BP 8.543e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0001510 RNA methylation BP 1.546e-08
GO:0016070 RNA metabolic process BP 1.182e-06
GO:0009451 RNA modification BP 1.262e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
LTN014-2 aza-dc+TSA		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 246375_at AT1G51830 [Leucine-rich repeat protein kinase family protein] 0.270 -0.223
2 264809_at AT1G08830 CSD1, copper/zinc superoxide dismutase 1 0.168 -0.099
3 256811_at AT3G21340 [Leucine-rich repeat protein kinase family protein] 0.159 0.075
4 256766_at AT3G22231 PCC1, PATHOGEN AND CIRCADIAN CONTROLLED 1 0.156 0.069
5 246589_at AT5G14860 [UDP-Glycosyltransferase superfamily protein] 0.145 0.189
6 267472_at AT2G02850 ARPN, plantacyanin 0.143 0.160
7 251254_at AT3G62270 BOR2, REQUIRES HIGH BORON 2 0.127 -0.101
8 245669_at AT1G28300 LEC2, LEAFY COTYLEDON 2 0.127 0.022
9 254819_at AT4G12500 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.126 -0.096
10 265688_at AT2G24300 [Calmodulin-binding protein] 0.124 0.094
11 246727_at AT5G28010 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] 0.124 0.014
12 258792_at AT3G04640 [glycine-rich protein] 0.116 0.150
13 265316_at AT2G20400 [myb-like HTH transcriptional regulator family protein] 0.113 -0.082
14 265846_at AT2G35770 scpl28, serine carboxypeptidase-like 28 0.113 0.092
15 244931_at ATMG00630 ORF110B 0.108 -0.057
16 246600_at AT5G14930 SAG101, senescence-associated gene 101 0.108 -0.044
17 245113_at AT2G41660 MIZ1, mizu-kussei 1 0.103 -0.022
18 260039_at AT1G68795 CLE12, CLAVATA3/ESR-RELATED 12 0.102 -0.044
19 266305_at AT2G27120 POL2B, TIL2, TILTED 2 0.101 0.085
20 263370_at AT2G20500 unknown 0.099 0.036
21 255402_at AT4G03205 hemf2 0.096 -0.098
22 246540_at AT5G15600 SP1L4, SPIRAL1-like4 0.094 -0.152
23 252650_at AT3G44690 unknown 0.094 0.046
24 258718_at AT3G09760 [RING/U-box superfamily protein] 0.094 -0.291
25 264940_at AT1G60470 AtGolS4, galactinol synthase 4, GolS4, galactinol synthase 4 0.092 -0.044
26 254387_at AT4G21850 ATMSRB9, methionine sulfoxide reductase B9, MSRB9, methionine sulfoxide reductase B9 0.090 -0.118
27 257346_at AT3G30846 [gypsy-like retrotransposon family, has a 1.0e-303 P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)] 0.087 0.133
28 267559_at AT2G45570 CYP76C2, cytochrome P450, family 76, subfamily C, polypeptide 2 -0.236 0.024
29 249527_at AT5G38710 [Methylenetetrahydrofolate reductase family protein] -0.193 -0.498
30 267480_at AT2G02830 [copia-like retrotransposon family, has a 1.3e-37 P-value blast match to GB:CAA72990 open reading frame 2 (Ty1_Copia-element) (Brassica oleracea)] -0.192 0.094
31 252970_at AT4G38850 ATSAUR15, ARABIDOPSIS THALIANA SMALL AUXIN UPREGULATED 15, SAUR-AC1, ARABIDOPSIS COLUMBIA SAUR GENE 1, SAUR15, SMALL AUXIN UPREGULATED 15, SAUR_AC1, SMALL AUXIN UP RNA 1 FROM ARABIDOPSIS THALIANA ECOTYPE COLUMBIA -0.182 0.004
32 254716_at AT4G13560 UNE15, unfertilized embryo sac 15 -0.173 0.053
33 261429_at AT1G18860 ATWRKY61, WRKY DNA-BINDING PROTEIN 61, WRKY61, WRKY DNA-binding protein 61 -0.165 0.020
34 266799_at AT2G22860 ATPSK2, phytosulfokine 2 precursor, PSK2, phytosulfokine 2 precursor -0.155 0.030
35 252108_at AT3G51530 [F-box/RNI-like/FBD-like domains-containing protein] -0.149 0.026
36 265414_at AT2G16660 [Major facilitator superfamily protein] -0.146 -0.038
37 256814_at AT3G21370 BGLU19, beta glucosidase 19 -0.144 -0.098
38 258548_at AT3G06910 AtULP1a, ELS1, ESD4-LIKE SUMO PROTEASE 1, ULP1A, UB-like protease 1A -0.138 -0.026
39 267147_at AT2G38240 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.131 0.200
40 264870_at AT1G24210 [Paired amphipathic helix (PAH2) superfamily protein] -0.131 0.032
41 261776_at AT1G76190 SAUR56, SMALL AUXIN UPREGULATED RNA 56 -0.131 -0.012
42 257672_at AT3G20300 unknown -0.126 -0.052
43 263439_at AT2G28650 ATEXO70H8, exocyst subunit exo70 family protein H8, EXO70H8, exocyst subunit exo70 family protein H8 -0.126 -0.123
44 258957_at AT3G01420 ALPHA-DOX1, alpha-dioxygenase 1, DIOX1, DOX1, PADOX-1, plant alpha dioxygenase 1 -0.123 0.093
45 259834_at AT1G69570 [Dof-type zinc finger DNA-binding family protein] -0.121 0.018
46 254197_at AT4G24040 ATTRE1, TRE1, trehalase 1 -0.119 -0.074
47 255449_at AT4G02820 [Pentatricopeptide repeat (PPR) superfamily protein] -0.116 -0.055
48 247515_at AT5G61740 ABCA10, ATP-binding cassette A10, ATATH14, ARABIDOPSIS THALIANA ABC2 HOMOLOG 14, ATH14, ABC2 homolog 14 -0.114 0.133
49 254293_at AT4G23060 IQD22, IQ-domain 22 -0.111 0.370
50 246310_at AT3G51895 AST12, SULTR3;1, sulfate transporter 3;1 -0.109 0.149
51 264415_at AT1G43160 RAP2.6, related to AP2 6 -0.107 -0.003
52 249124_at AT5G43740 [Disease resistance protein (CC-NBS-LRR class) family] -0.107 0.027
53 246433_at AT5G17510 unknown -0.103 -0.218