4.0:Information of module
AtNIGT1/HRS1 +CHX + DEX + Nitrate
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0016998 cell wall macromolecule catabolic proces... BP 3.336e-03
GO:0051301 cell division BP 1.035e-02
GO:0048316 seed development BP 1.236e-02
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0042542 response to hydrogen peroxide BP 8.498e-24
GO:0009408 response to heat BP 2.237e-23
GO:0009644 response to high light intensity BP 5.338e-23
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
AtNIGT1/HRS1 +CHX + DEX + Nitrate		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 249738_at AT5G24510 [60S acidic ribosomal protein family] 0.623 -0.018
2 266393_at AT2G41260 ATM17, M17 0.562 0.017
3 256243_at AT3G12500 ATHCHIB, basic chitinase, B-CHI, CHI-B, HCHIB, basic chitinase, PR-3, PATHOGENESIS-RELATED 3, PR3, PATHOGENESIS-RELATED 3 0.512 -0.049
4 265316_at AT2G20400 [myb-like HTH transcriptional regulator family protein] 0.511 -0.082
5 258995_at AT3G01790 [Ribosomal protein L13 family protein] 0.438 -0.076
6 250854_at AT5G04710 [Zn-dependent exopeptidases superfamily protein] 0.408 0.017
7 248704_at AT5G48450 sks3, SKU5 similar 3 0.401 0.013
8 247405_at AT5G62880 ARAC10, RAC-like 10, ATRAC10, ARABIDOPSIS THALIANA RAC-LIKE 10, ATROP11, RHO-RELATED PROTEIN FROM PLANTS 11, RAC10, RAC-like 10, ROP11, RHO-related protein from plants 11 0.399 -0.021
9 245279_at AT4G17270 [Mo25 family protein] 0.399 0.049
10 266905_at AT2G34560 AtCCP1, CCP1, conserved in ciliated species and in the land plants 1 0.397 -0.099
11 266577_at AT2G23945 [Eukaryotic aspartyl protease family protein] 0.388 0.017
12 261640_at AT1G49960 [Xanthine/uracil permease family protein] 0.384 -0.387
13 249775_at AT5G24160 SQE6, squalene monoxygenase 6 0.368 -0.023
14 256209_at AT1G50940 ETFALPHA, electron transfer flavoprotein alpha 0.367 0.180
15 251708_at AT3G56580 AtRZF1, RZF1, RING Zinc Finger 1 0.364 0.023
16 266861_at AT2G26830 emb1187, embryo defective 1187 0.363 -0.056
17 258689_at AT3G07940 [Calcium-dependent ARF-type GTPase activating protein family] 0.335 -0.080
18 263215_at AT1G30710 [FAD-binding Berberine family protein] 0.323 -0.003
19 260384_at AT1G74040 IMS1, 2-isopropylmalate synthase 1, IPMS2, SOPROPYLMALATE SYNTHASE 2, MAML-3 0.312 -0.003
20 250331_at AT5G11820 [Plant self-incompatibility protein S1 family] 0.306 0.006
21 261112_at AT1G75420 [UDP-Glycosyltransferase superfamily protein] 0.302 -0.048
22 266904_at AT2G34590 [Transketolase family protein] 0.299 -0.177
23 246948_at AT5G25130 CYP71B12, cytochrome P450, family 71, subfamily B, polypeptide 12 0.294 0.419
24 266489_at AT2G35190 ATNPSN11, NPSN11, novel plant snare 11, NSPN11 0.289 -0.152
25 256322_at AT1G54990 AXR4, AUXIN RESISTANT 4, RGR, REDUCED ROOT GRAVITROPISM, RGR1, REDUCED ROOT GRAVITROPISM 1 0.288 0.049
26 247255_at AT5G64780 [Uncharacterised conserved protein UCP009193] 0.285 -0.048
27 266050_at AT2G40770 [zinc ion binding] 0.272 -0.014
28 263584_at AT2G17040 anac036, NAC domain containing protein 36, NAC036, NAC domain containing protein 36 -0.732 0.146
29 262510_at AT1G11270 [F-box and associated interaction domains-containing protein] -0.645 0.085
30 250388_at AT5G11310 [Pentatricopeptide repeat (PPR) superfamily protein] -0.578 -0.051
31 246568_at AT5G14960 DEL2, DP-E2F-like 2, E2FD, E2L1 -0.521 -0.003
32 252513_at AT3G46220 unknown -0.476 -0.231
33 258354_at AT3G14320 [Zinc finger, C3HC4 type (RING finger) family protein] -0.475 -0.112
34 267336_at AT2G19310 [HSP20-like chaperones superfamily protein] -0.473 -0.010
35 267556_at AT2G32810 BGAL9, beta galactosidase 9, BGAL9, beta-galactosidase 9 -0.467 0.153
36 253948_at AT4G26940 [Galactosyltransferase family protein] -0.459 0.044
37 248657_at AT5G48570 ATFKBP65, FKBP65, ROF2 -0.458 0.078
38 250925_at AT5G03370 [acylphosphatase family] -0.456 -0.006
39 265908_at AT4G00270 [DNA-binding storekeeper protein-related transcriptional regulator] -0.455 -0.068
40 257051_at AT3G15270 SPL5, squamosa promoter binding protein-like 5 -0.450 0.039
41 248541_at AT5G50180 [Protein kinase superfamily protein] -0.444 0.024
42 258336_at AT3G16050 A37, ATPDX1.2, ARABIDOPSIS THALIANA PYRIDOXINE BIOSYNTHESIS 1.2, PDX1.2, pyridoxine biosynthesis 1.2 -0.437 -0.117
43 258984_at AT3G08970 ATERDJ3A, TMS1, THERMOSENSITIVE MALE STERILE 1 -0.430 0.018
44 255547_at AT4G01920 [Cysteine/Histidine-rich C1 domain family protein] -0.422 0.047
45 246475_at AT5G16720 MyoB3, myosin binding protein 3 -0.420 -0.048
46 253095_at AT4G37510 [Ribonuclease III family protein] -0.407 -0.122
47 259037_at AT3G09350 Fes1A, Fes1A -0.396 -0.024
48 261069_at AT1G07410 ATRAB-A2B, ARABIDOPSIS RAB GTPASE HOMOLOG A2B, ATRABA2B, RAB GTPase homolog A2B, RAB-A2B, RAB GTPASE HOMOLOG A2B, RABA2b, RAB GTPase homolog A2B -0.393 -0.065
49 248280_at AT5G52950 unknown -0.392 -0.088
50 261201_at AT1G12850 [Phosphoglycerate mutase family protein] -0.389 -0.114
51 266590_at AT2G46240 ATBAG6, ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 6, BAG6, BCL-2-associated athanogene 6 -0.384 -0.098
52 261016_at AT1G26560 BGLU40, beta glucosidase 40 -0.378 -0.018
53 245725_at AT1G73370 ATSUS6, ARABIDOPSIS THALIANA SUCROSE SYNTHASE 6, SUS6, sucrose synthase 6 -0.377 0.069