4.0:Information of module
bbx24 in With Light
In comparison with seed germinating in countinuous light 24h SL help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0046467 membrane lipid biosynthetic process BP 7.097e-04
GO:0071705 nitrogen compound transport BP 1.046e-03
GO:1903509 liposaccharide metabolic process BP 1.141e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009749 response to glucose BP 2.168e-03
GO:0042221 response to chemical BP 2.547e-03
GO:0010114 response to red light BP 3.656e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
bbx24 in With Light		 Log2 signal ratio
seed germinating in countinuous light 24h SL
1 260973_at AT1G53490 HEI10, homolog of human HEI10 ( Enhancer of cell Invasion No.10) 0.234 0.084
2 266578_at AT2G23910 [NAD(P)-binding Rossmann-fold superfamily protein] 0.213 0.153
3 247519_at AT5G61430 ANAC100, NAC domain containing protein 100, ATNAC5, NAC100, NAC domain containing protein 100 0.150 -0.764
4 261215_at AT1G32970 [Subtilisin-like serine endopeptidase family protein] 0.120 -0.550
5 254993_at AT4G10730 [Protein kinase superfamily protein] 0.117 0.242
6 257736_at AT3G27410 unknown 0.111 -0.054
7 252684_at AT3G44400 [Disease resistance protein (TIR-NBS-LRR class) family] 0.105 -1.437
8 256913_at AT3G23870 unknown 0.097 -1.183
9 266873_at AT2G44740 CYCP4;1, cyclin p4;1 0.097 -0.036
10 255090_at AT4G09360 [NB-ARC domain-containing disease resistance protein] 0.092 -1.233
11 256762_at AT3G25655 IDL1, inflorescence deficient in abscission (IDA)-like 1 0.092 -0.163
12 254781_at AT4G12840 unknown 0.092 0.616
13 250629_at AT5G07390 ATRBOHA, respiratory burst oxidase homolog A, RBOHA, respiratory burst oxidase homolog A 0.091 -0.391
14 247752_at AT5G59060 unknown 0.088 -0.741
15 263700_at AT1G31150 [FUNCTIONS IN: sequence-specific DNA binding transcription factor activity] 0.087 -0.601
16 255481_at AT4G02460 AtPMS1, PMS1, POSTMEIOTIC SEGREGATION 1 0.086 0.766
17 250168_at AT5G15320 unknown 0.084 1.076
18 255751_at AT1G31950 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] 0.082 -0.431
19 257058_at AT3G15352 ATCOX17, ARABIDOPSIS THALIANA CYTOCHROME C OXIDASE 17, COX17, cytochrome c oxidase 17 0.082 0.603
20 267364_at AT2G40080 ELF4, EARLY FLOWERING 4 0.077 0.235
21 256097_at AT1G13670 unknown 0.074 -0.024
22 257353_at AT2G23050 MEL4, MAB4/ENP/NPY1-LIKE 4, NPY4, NAKED PINS IN YUC MUTANTS 4 0.073 -0.320
23 253663_at AT4G30160 ATVLN4, VLN4, villin 4 0.069 0.479
24 250180_at AT5G14450 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.201 1.802
25 262838_at AT1G14960 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.164 -0.953
26 248657_at AT5G48570 ATFKBP65, FKBP65, ROF2 -0.161 0.417
27 247717_at AT5G59320 LTP3, lipid transfer protein 3 -0.146 0.012
28 260041_at AT1G68780 [RNI-like superfamily protein] -0.139 0.003
29 264527_at AT1G30760 [FAD-binding Berberine family protein] -0.125 -0.361
30 266821_at AT2G44840 ATERF13, ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13, EREBP, ERF13, ethylene-responsive element binding factor 13 -0.123 0.120
31 262332_at AT1G64030 ATSRP3, SRP3, serpin 3 -0.110 -1.401
32 257744_at AT3G29230 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.094 0.531
33 255637_at AT4G00750 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.089 -0.479
34 263417_at AT2G17180 DAZ1, DUO1-ACTIVATED ZINC FINGER 1 -0.089 -0.897
35 247524_at AT5G61440 ACHT5, atypical CYS HIS rich thioredoxin 5 -0.088 0.224
36 246439_at AT5G17600 [RING/U-box superfamily protein] -0.085 -1.135
37 255822_at AT2G40610 ATEXP8, ATEXPA8, expansin A8, ATHEXP ALPHA 1.11, EXP8, EXPA8, expansin A8 -0.083 0.535
38 254758_at AT4G13260 AtYUC2, YUC2, YUCCA2 -0.082 -0.370
39 259037_at AT3G09350 Fes1A, Fes1A -0.079 -0.148
40 255798_at AT2G33255 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -0.072 -0.213
41 263790_at AT2G24530 unknown -0.072 0.237
42 266682_at AT2G19780 [Leucine-rich repeat (LRR) family protein] -0.071 -0.135
43 261493_at AT1G14410 ATWHY1, A. THALIANA WHIRLY 1, PTAC1, WHY1, WHIRLY 1 -0.069 0.135
44 256741_at AT3G29375 [XH domain-containing protein] -0.068 1.062
45 257582_at AT1G50720 [Stigma-specific Stig1 family protein] -0.068 -1.005