4.0:Information of module
seedling h S Exp
In comparison with Laer pretreat GA Flg22 1h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0001510 RNA methylation BP 3.746e-27
GO:1901566 organonitrogen compound biosynthetic pro... BP 8.601e-25
GO:0043414 macromolecule methylation BP 7.014e-24
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0072348 sulfur compound transport BP 7.184e-04
GO:0006498 N-terminal protein lipidation BP 7.963e-04
GO:0006499 N-terminal protein myristoylation BP 7.963e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
seedling h S Exp		 Log2 signal ratio
Laer pretreat GA Flg22 1h
1 249866_at AT5G23010 IMS3, 2-ISOPROPYLMALATE SYNTHASE 3, MAM1, methylthioalkylmalate synthase 1 0.969 -0.395
2 251524_at AT3G58990 IPMI1, isopropylmalate isomerase 1 0.837 -0.443
3 260745_at AT1G78370 ATGSTU20, glutathione S-transferase TAU 20, GSTU20, glutathione S-transferase TAU 20 0.716 -0.259
4 258851_at AT3G03190 ATGSTF11, glutathione S-transferase F11, ATGSTF6, ARABIDOPSIS GLUTATHIONE-S-TRANSFERASE 6, GSTF11, glutathione S-transferase F11 0.638 0.025
5 255773_at AT1G18590 ATSOT17, SULFOTRANSFERASE 17, ATST5C, ARABIDOPSIS SULFOTRANSFERASE 5C, SOT17, sulfotransferase 17 0.618 0.296
6 253975_at AT4G26600 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.435 0.025
7 254862_at AT4G12030 BASS5, BILE ACID:SODIUM SYMPORTER FAMILY PROTEIN 5, BAT5, bile acid transporter 5 0.435 -0.070
8 266395_at AT2G43100 ATLEUD1, IPMI2, isopropylmalate isomerase 2 0.433 -0.228
9 255278_at AT4G04940 [transducin family protein / WD-40 repeat family protein] 0.374 -0.056
10 259264_at AT3G01260 [Galactose mutarotase-like superfamily protein] 0.361 0.068
11 250196_at AT5G14580 [polyribonucleotide nucleotidyltransferase, putative] 0.358 0.091
12 266253_at AT2G27840 HD2D, histone deacetylase 2D, HDA13, HISTONE DEACETYLASE 13, HDT04, HDT4 0.341 -0.084
13 257207_at AT3G14900 EMB3120, EMBRYO DEFECTIVE 3120 0.332 0.022
14 251106_at AT5G01500 TAAC, thylakoid ATP/ADP carrier 0.328 0.295
15 245770_at AT1G30240 [FUNCTIONS IN: binding] 0.324 -0.036
16 265730_at AT2G32220 [Ribosomal L27e protein family] 0.309 -0.074
17 261296_at AT1G48460 unknown 0.289 -0.078
18 266934_at AT2G18900 [Transducin/WD40 repeat-like superfamily protein] 0.288 0.078
19 258166_at AT3G21540 [transducin family protein / WD-40 repeat family protein] 0.280 -0.041
20 251593_at AT3G57660 NRPA1, nuclear RNA polymerase A1 0.280 -0.053
21 252625_at AT3G44750 ATHD2A, HD2A, HISTONE DEACETYLASE 2A, HDA3, histone deacetylase 3, HDT1 0.278 -0.052
22 263714_at AT2G20610 ALF1, ABERRANT LATERAL ROOT FORMATION 1, HLS3, HOOKLESS 3, RTY, ROOTY, RTY1, ROOTY 1, SUR1, SUPERROOT 1 0.278 0.210
23 248036_at AT5G55920 OLI2, OLIGOCELLULA 2 0.264 -0.103
24 263477_at AT2G31790 [UDP-Glycosyltransferase superfamily protein] 0.263 -0.279
25 245421_at AT4G17430 [O-fucosyltransferase family protein] 0.261 0.069
26 246457_at AT5G16750 TOZ, TORMOZEMBRYO DEFECTIVE 0.255 -0.025
27 258009_at AT3G19440 [Pseudouridine synthase family protein] 0.254 -0.016
28 255225_at AT4G05410 YAO, YAOZHE 0.254 -0.049
29 249426_at AT5G39840 [ATP-dependent RNA helicase, mitochondrial, putative] 0.251 0.029
30 253252_at AT4G34740 ASE2, GLN phosphoribosyl pyrophosphate amidotransferase 2, ATASE2, GLN phosphoribosyl pyrophosphate amidotransferase 2, ATPURF2, CIA1, CHLOROPLAST IMPORT APPARATUS 1, DOV1, DIFFERENTIAL DEVELOPMENT OF VASCULAR ASSOCIATED CELLS 0.250 -0.071
31 254455_at AT4G21140 unknown 0.244 0.098
32 245494_at AT4G16390 SVR7, suppressor of variegation 7 0.243 -0.224
33 265961_at AT2G37400 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.241 0.025
34 254080_at AT4G25630 ATFIB2, FIB2, fibrillarin 2 0.239 -0.100
35 262766_at AT1G13160 [ARM repeat superfamily protein] 0.236 -0.021
36 247040_at AT5G67150 [HXXXD-type acyl-transferase family protein] 0.235 -0.336
37 256065_at AT1G07070 [Ribosomal protein L35Ae family protein] 0.232 -0.091
38 262573_at AT1G15390 ATDEF1, PDF1A, peptide deformylase 1A 0.232 -0.151
39 253566_at AT4G31210 [DNA topoisomerase, type IA, core] 0.231 -0.071
40 253598_at AT4G30800 [Nucleic acid-binding, OB-fold-like protein] 0.227 0.074
41 252252_at AT3G49180 RID3, ROOT INITIATION DEFECTIVE 3 0.225 -0.032
42 254430_at AT4G20820 [FAD-binding Berberine family protein] -0.842 -0.024
43 258983_at AT3G08860 PYD4, PYRIMIDINE 4 -0.770 -0.044
44 259133_at AT3G05400 [Major facilitator superfamily protein] -0.718 0.233
45 252269_at AT3G49580 LSU1, RESPONSE TO LOW SULFUR 1 -0.694 0.276
46 263168_at AT1G03020 [Thioredoxin superfamily protein] -0.608 -0.031
47 256244_at AT3G12520 SULTR4;2, sulfate transporter 4;2 -0.600 0.119
48 254343_at AT4G21990 APR3, APS reductase 3, ATAPR3, PRH-26, PRH26, PAPS REDUCTASE HOMOLOG 26 -0.598 0.104
49 261177_at AT1G04770 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.590 0.163
50 250025_at AT5G18290 SIP1;2, SIP1B, SMALL AND BASIC INTRINSIC PROTEIN 1B -0.580 0.145
51 251130_at AT5G01180 AtNPF8.2, ATPTR5, ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 5, NPF8.2, NRT1/ PTR family 8.2, PTR5, peptide transporter 5 -0.419 0.212
52 262134_at AT1G77990 AST56, SULTR2;2, SULPHATE TRANSPORTER 2;2 -0.414 0.125
53 262133_at AT1G78000 SEL1, SELENATE RESISTANT 1, SULTR1;2, sulfate transporter 1;2 -0.378 0.210
54 248713_at AT5G48180 AtNSP5, NSP5, nitrile specifier protein 5 -0.373 0.176
55 262229_at AT1G68620 [alpha/beta-Hydrolases superfamily protein] -0.369 0.137
56 249869_at AT5G23050 AAE17, acyl-activating enzyme 17 -0.346 0.125
57 264745_at AT1G62180 5'adenylylphosphosulfate reductase 2 -0.343 0.103
58 253525_at AT4G31330 unknown -0.311 0.042
59 252712_at AT3G43800 ATGSTU27, glutathione S-transferase tau 27, GSTU27, glutathione S-transferase tau 27 -0.291 -0.073
60 252677_at AT3G44320 AtNIT3, NITRILASE 3, NIT3, nitrilase 3 -0.288 0.041
61 253203_at AT4G34710 ADC2, arginine decarboxylase 2, ATADC2, SPE2 -0.271 0.099
62 251060_at AT5G01820 ATCIPK14, ATSR1, serine/threonine protein kinase 1, CIPK14, CBL-INTERACTING PROTEIN KINASE 14, PKS24, SOS2-like protein kinase 24, SnRK3.15, SNF1-RELATED PROTEIN KINASE 3.15, SR1, serine/threonine protein kinase 1 -0.258 0.102
63 249850_at AT5G23240 DJC76, DNA J protein C76 -0.239 0.510
64 249917_at AT5G22460 [alpha/beta-Hydrolases superfamily protein] -0.235 -0.166
65 254836_at AT4G12330 CYP706A7, cytochrome P450, family 706, subfamily A, polypeptide 7 -0.217 0.124
66 245689_at AT5G04120 [Phosphoglycerate mutase family protein] -0.186 0.039
67 254926_at AT4G11280 ACS6, 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6, ATACS6 -0.183 0.170
68 256633_at AT3G28340 GATL10, galacturonosyltransferase-like 10, GolS8, galactinol synthase 8 -0.171 0.089
69 249533_at AT5G38790 unknown -0.168 0.050
70 261292_at AT1G36940 unknown -0.167 0.073
71 256453_at AT1G75270 DHAR2, dehydroascorbate reductase 2 -0.162 0.088
72 253454_at AT4G31875 unknown -0.160 0.049
73 255740_at AT1G25390 [Protein kinase superfamily protein] -0.160 0.103
74 253990_at AT4G26160 ACHT1, atypical CYS HIS rich thioredoxin 1 -0.158 0.101
75 246396_at AT1G58180 ATBCA6, A. THALIANA BETA CARBONIC ANHYDRASE 6, BCA6, beta carbonic anhydrase 6 -0.158 0.044
76 250054_at AT5G17860 CAX7, calcium exchanger 7 -0.154 -0.084
77 262887_at AT1G14780 [MAC/Perforin domain-containing protein] -0.143 0.104
78 265443_at AT2G20750 ATEXPB1, expansin B1, ATHEXP BETA 1.5, EXPB1, expansin B1 -0.139 0.156
79 263287_at AT2G36145 unknown -0.139 -0.382
80 249010_at AT5G44580 unknown -0.138 -0.196
81 251315_at AT3G61410 unknown -0.135 0.106
82 257923_at AT3G23160 unknown -0.133 0.220