GOID	TERM	ONTOLOGY	pValue	Genes
GO:0009612	response to mechanical stimulus	BP	1.85364158628393e-07	EXL1//CML24//RBK1//ATXT1//AGP20//ATCML9//AtCAF1a//AT4G29780//AT4G27280//DIC2//AT1G18740//AT2G39650
GO:0010200	response to chitin	BP	5.35775184770326e-07	AT2G41640//AT1G50740//AT5G65300//AtZAT12//ATNPR3//CML24//AT3G63380//ATXT1//AT3G59350//AT3G57450//AT3G46600//AT3G44190//AtCAF1a//AT4G29780//AT4G27280//DIC2//AT4G24160//AT4G18950//PMZ//AT3G25600//AGC2//BZIP28//AT3G05500//AT1G76600//AT1G74410//AT1G68340//AT1G32460//AT1G07520//AT1G32920//AT1G18740//AT2G39650
GO:0010243	response to organonitrogen compound	BP	8.59000991503333e-07	AT2G41640//AT1G50740//AT5G65300//AtZAT12//ATNPR3//CML24//AT3G63380//ATXT1//AT3G59350//AT3G57450//AT3G46600//AT3G44190//AtCAF1a//AT4G29780//AT4G27280//DIC2//AT4G24160//AT4G18950//PMZ//AT3G25600//AGC2//BZIP28//AT3G05500//AT1G76600//AT1G74410//AT1G68340//AT1G32460//AT1G07520//AT1G32920//AT1G18740//AT2G39650
GO:0009408	response to heat	BP	4.02299361595288e-05	CYT1//AT5G10695//TIN1//AtZAT12//ATSUMO2//AT5G53680//cpHsc70-2//AtCEST//CML24//HSP17.6II//AT4G02550//DREB2//PMZ//ATFKBP62//ATMBF1C//ATHSFA1E//BZIP28//AT3G09440//AT1G60970//ANN5//RPN12a//AT1G54050
GO:1901698	response to nitrogen compound	BP	4.74425396088633e-05	CYT1//AT2G41640//AT1G50740//AT5G65300//AtZAT12//ATNRT3.1//ATTIP2;3//ATNPR3//CML24//AT3G63380//ATXT1//AT3G59350//AT3G57450//AT3G46600//AT3G44190//AtCAF1a//AT4G29780//AT4G27280//DIC2//AT4G24160//AT4G18950//PMZ//AT3G25600//DRB3//AGC2//BZIP28//AT3G05500//AT1G76600//AT1G74410//AT1G68340//AT1G32460//AT1G07520//AT1G32920//AT1G18740//ATMYB72//AT2G21045//AT2G39110//AT2G39650
GO:0009407	toxin catabolic process	BP	0.000236167683437823	ATGPX5//AT3G44190//AT4G24160//ATGPX6//PMZ//SRO2//ANAC053//PBG1//ATGSTU22//RPN12a//ATGSTU25//ATGSTU24//UGT1//ATGSTU2//ATGSTU1//AT2G38240
GO:0090487	secondary metabolite catabolic process	BP	0.000236167683437823	ATGPX5//AT3G44190//AT4G24160//ATGPX6//PMZ//SRO2//ANAC053//PBG1//ATGSTU22//RPN12a//ATGSTU25//ATGSTU24//UGT1//ATGSTU2//ATGSTU1//AT2G38240
GO:1901700	response to oxygen-containing compound	BP	0.000291623108173637	CYT1//ATCYSA//AT2G41640//AT1G51090//AT1G50740//AT5G65300//TIN1//ATMYB96//AtZAT12//ANK//AT5G53680//ATNRT3.1//cpHsc70-2//ATTIP2;3//ATCBL9//ATNPR3//AtCEST//ACYB-1//CML24//HSP17.6II//PROPEP4//AT5G10120//AT3G63380//ATXT1//AT3G59350//AT3G57450//ATCML9//MAPKKK20//AT3G46600//AT3G44190//AtCAF1a//CSDP1//AT4G30660//AT4G29780//AT4G27280//DIC2//AT4G24380//AT4G24160//AT4G18950//ABC33//AT0ZI1//DGD2//DREB2//PMZ//AT3G25600//ATMT3//ATMYB30//ATFKBP62//AGC2//ATMBF1C//AT3G15630//LBD41//RCI2A//BZIP28//ANAC053//AT3G10040//AT3G09440//AT3G05500//ATBSMT1//AT1G13340//ATCCS//AT1G60970//AT1G76600//ANN5//AT1G74410//AT1G68340//AT1G32460//AT1G07520//ANAC013//AT1G32920//AT1G18740//ATMYB72//AT1G68670//AT1G20950//ATRHM1//AT1G54050//UGT1//AT2G20270//AT2G21045//AT2G39110//AXL//AT2G39650
GO:0009404	toxin metabolic process	BP	0.000317019020913752	ATGPX5//AT3G44190//AT4G24160//ATGPX6//PMZ//SRO2//ANAC053//PBG1//ATGSTU22//RPN12a//ATGSTU25//ATGSTU24//UGT1//ATGSTU2//ATGSTU1//AT2G38240
GO:0009611	response to wounding	BP	0.000758004553461391	AtZAT12//ATNRT3.1//CML24//AT3G57450//AtCAF1a//AT4G29780//AT4G27280//DIC2//AT4G24380//AT4G18950//AT4G10270//PMZ//ATFKBP62//AGC2//ATBSMT1//AT1G32920//AT1G18740//AT2G39650
GO:0010583	response to cyclopentenone	BP	0.00390227837541493	AT3G44190//AT4G24160//PMZ//SRO2//ANAC053//ATGSTU22//ATGSTU25//ATGSTU24//UGT1//ATGSTU2//ATGSTU1//AT2G38240
GO:0009266	response to temperature stimulus	BP	0.00547324558133456	CYT1//ATCYSA//AT1G51090//AT5G10695//TIN1//AtZAT12//ATSUMO2//AT5G53680//cpHsc70-2//BLOS2//AtCEST//CML24//HSP17.6II//ATCML9//MAPKKK20//CSDP1//AT4G30660//AT4G02550//DGD2//DREB2//PMZ//ATFKBP62//ATMBF1C//MAT4//ATHSFA1E//RCI2A//BZIP28//AT3G09440//AT1G60970//PATL1//ANN5//RPN12a//AT1G54050//AT2G20270//AXL
GO:0042221	response to chemical	BP	0.0066460933719982	CYT1//ATCYSA//AT2G41640//ATHB-2//AT1G51090//AT5G10695//AT1G50740//AT5G65300//TIN1//ATMYB96//AtZAT12//ANK//AT5G53680//ATNRT3.1//cpHsc70-2//ATTIP2;3//ATCBL9//ATNPR3//AT5G44990//AtCEST//ACYB-1//CML24//HSP17.6II//RBK1//PROPEP4//AT5G10120//AT3G63380//ATXT1//AT3G59350//AT3G57450//ATCML9//MAPKKK20//AT3G46600//AT3G44190//AtCAF1a//CSDP1//LHT7//AtCIB22//AT4G32530//AT4G30660//AT4G30390//AT4G29780//AT4G27280//DIC2//AT4G24380//AT4G24160//AT4G18950//ATGPX6//ABC33//AT0ZI1//DGD2//DREB2//PMZ//AT3G25600//DRB3//ATMT3//ATMYB30//SRO2//ATFKBP62//AGC2//ASK9//ATMBF1C//AT3G15630//IAA31//LBD41//RCI2A//BZIP28//ANAC053//AT3G10040//AT3G09440//AT3G05500//ATBSMT1//AT1G13340//ATCCS//GH3.17//PBG1//AT1G60970//PATL1//AT1G76600//ANN5//AT1G74410//AT1G68340//AT1G32460//ATGSTU22//AT1G07520//ANAC013//AT1G32920//AT1G18740//RPN12a//ATMYB72//AT1G68670//ATGSTU25//ATGSTU24//AT1G75990//AT1G20950//ATRHM1//AT1G54050//UGT1//ARR4//AT2G20270//AT2G21045//AT2G39110//ATGSTU2//ATGSTU1//AXL//AT2G38240//AT2G39920//AT2G39650
GO:0010017	red or far-red light signaling pathway	BP	0.0088967119150104	ATHB-2//PKS4//ARR4//ELF4
GO:0009414	response to water deprivation	BP	0.00925394657904314	ATCYSA//AT1G51090//ATMYB96//AtZAT12//ATCBL9//AtCEST//ATCML9//MAPKKK20//CSDP1//AT4G30660//AT4G18950//DGD2//DREB2//PMZ//ATMBF1C//ANAC053//ANN5//ANAC013
GO:0009719	response to endogenous stimulus	BP	0.0102331518174731	CYT1//AT2G41640//ATHB-2//AT1G51090//AT1G50740//AT5G65300//ATMYB96//AtZAT12//ANK//ATNPR3//AT5G44990//CML24//RBK1//PROPEP4//AT5G10120//AT3G63380//ATXT1//AT3G59350//AT3G57450//ATCML9//AT3G46600//AT3G44190//AtCAF1a//AT4G30390//AT4G29780//AT4G27280//DIC2//AT4G24380//AT4G24160//AT4G18950//ABC33//DGD2//PMZ//AT3G25600//ATMYB30//AGC2//ATMBF1C//IAA31//RCI2A//BZIP28//AT3G05500//ATBSMT1//GH3.17//AT1G76600//AT1G74410//AT1G68340//AT1G32460//AT1G07520//AT1G32920//AT1G18740//RPN12a//ATMYB72//AT1G68670//ATRHM1//ARR4//AXL//AT2G39650
GO:0009415	response to water	BP	0.0107468999950735	ATCYSA//AT1G51090//ATMYB96//AtZAT12//ATCBL9//AtCEST//ATCML9//MAPKKK20//CSDP1//AT4G30660//AT4G18950//DGD2//DREB2//PMZ//ATMBF1C//ANAC053//ANN5//ANAC013
GO:0071489	cellular response to red or far red ligh...	BP	0.0109926413310432	ATHB-2//PKS4//ARR4//ELF4
GO:0006401	RNA catabolic process	BP	0.0133821507205275	RNS2//AT5G59830//AtCAF1a//PAB5
GO:0009688	abscisic acid biosynthetic process	BP	0.0133821507205275	NDP1//ABA4//ATNCED9//AT2G35733
GO:0043289	apocarotenoid biosynthetic process	BP	0.0133821507205275	NDP1//ABA4//ATNCED9//AT2G35733
GO:0046482	para-aminobenzoic acid metabolic process	BP	0.0133821507205275	AT3G44190//AT2G17500//UGT1//ATGSTU1
GO:1902645	tertiary alcohol biosynthetic process	BP	0.0133821507205275	NDP1//ABA4//ATNCED9//AT2G35733
GO:0071478	cellular response to radiation	BP	0.0137236202625761	ATHB-2//PKS4//AtPHR1//ARR4//ELF4
GO:0071482	cellular response to light stimulus	BP	0.0137236202625761	ATHB-2//PKS4//AtPHR1//ARR4//ELF4
GO:0071214	cellular response to abiotic stimulus	BP	0.0143240488049025	ATHB-2//PKS4//AT4G30660//AtPHR1//DGD2//ANAC013//ARR4//ELF4
GO:0010286	heat acclimation	BP	0.0177618463605445	AT5G10695//AtZAT12//AtCEST//AT4G02550//DREB2//PMZ//ATFKBP62
GO:0016106	sesquiterpenoid biosynthetic process	BP	0.0190910985250361	NDP1//ABA4//ATNCED9//AT2G35733
GO:0031347	regulation of defense response	BP	0.0191408797626011	AT1G25275//AT5G10695//AT1G50740//ANK//ATNRT3.1//ATNPR3//LSU2//ATCML9//LHT7//ATBT1//AT4G18950//AT4G02550//DGD2//PMZ//ATMT3//BZIP28//AT1G13340//AT1G18740//ATMYB72//ARR4//AT2G30930
GO:0035556	intracellular signal transduction	BP	0.0198642357324821	ATRAB1C//AT5G65300//AT5G59840//ANK//ATCBL9//RBK1//AT3G57450//ATCML9//ATRAB-A2C//AT3G46600//AtCAF1a//ATGB2//AT4G29780//DGD2//AT3G19310//ATMBF1C//ATRAB18C//BZIP28//AT1G76600//AT1G07520//AT1G32920//AT1G49740//ATMYB72//ARR4//AtRABA5d//PS2//AT2G39650
GO:0010033	response to organic substance	BP	0.0215669789750643	CYT1//AT2G41640//ATHB-2//AT1G51090//AT5G10695//AT1G50740//AT5G65300//ATMYB96//AtZAT12//ANK//ATNPR3//AT5G44990//ACYB-1//CML24//RBK1//PROPEP4//AT5G10120//AT3G63380//ATXT1//AT3G59350//AT3G57450//ATCML9//AT3G46600//AT3G44190//AtCAF1a//LHT7//AtCIB22//AT4G30390//AT4G29780//AT4G27280//DIC2//AT4G24380//AT4G24160//AT4G18950//ABC33//DGD2//PMZ//AT3G25600//DRB3//ATMT3//ATMYB30//SRO2//AGC2//ASK9//ATMBF1C//AT3G15630//IAA31//LBD41//RCI2A//BZIP28//ANAC053//AT3G10040//AT3G05500//ATBSMT1//AT1G13340//GH3.17//PBG1//AT1G76600//AT1G74410//AT1G68340//AT1G32460//ATGSTU22//AT1G07520//AT1G32920//AT1G18740//RPN12a//ATMYB72//AT1G68670//ATGSTU25//ATGSTU24//AT1G75990//AT1G20950//ATRHM1//UGT1//ARR4//AT2G20270//ATGSTU2//ATGSTU1//AXL//AT2G38240//AT2G39650
GO:0034976	response to endoplasmic reticulum stress	BP	0.0218178953696927	AT5G10695//AT1G50740//TIN1//AtZAT12//ATNRT3.1//cpHsc70-2//HSP17.6II//AT3G63380//AT3G57450//LHT7//DGD2//ATFKBP62//ATMBF1C//BZIP28//AT1G60970//AT2G39650
GO:0009687	abscisic acid metabolic process	BP	0.0224308020005335	NDP1//ABA4//ATNCED9//AT2G35733
GO:0043288	apocarotenoid metabolic process	BP	0.0224308020005335	NDP1//ABA4//ATNCED9//AT2G35733
GO:1902644	tertiary alcohol metabolic process	BP	0.0224308020005335	NDP1//ABA4//ATNCED9//AT2G35733
GO:0006950	response to stress	BP	0.025455277884471	CYT1//ATCYSA//AT1G25275//AT1G51090//EXL1//AT5G10695//AT3G56750//AT1G50740//TIN1//ATMYB96//AtZAT12//ATPXG2//ATSUMO2//ANK//AT5G53680//ATNRT3.1//cpHsc70-2//BLOS2//ATTIP2;3//ATCBL9//ATNPR3//AtCEST//AtGDPD2//CML24//LSU2//AT5G17760//HSP17.6II//NOXY2//RBK1//AT5G01650//AT3G63380//ATGPX5//AT3G57450//ATCML9//MAPKKK20//AT3G46600//AtCAF1a//CSDP1//LHT7//AtCIB22//ATBT1//AT4G32530//AT4G30660//AT4G29780//AtPHR1//AT4G27280//DIC2//AT4G24380//AT4G24160//AT4G23680//AT4G18950//ATGPX6//AT4G02550//AT0ZI1//DGD2//AT4G10270//DREB2//PMZ//DRB3//ATMT3//ATMYB30//ATFKBP62//AGC2//ASK9//ATMBF1C//MAT4//LBD41//ATHSFA1E//RCI2A//BZIP28//ANAC053//AT3G10040//AT3G09440//NHL2//ATBSMT1//AtPEPC1//AT1G13340//MAN1//ATCCS//PBG1//AT1G60970//PATL1//AT1G76600//ANN5//ATTI2//AT2G43535//AT1G07520//ANAC013//AT1G32920//AT1G18740//RPN12a//ATMYB72//AT1G52420//AT1G72850//ATGSTU24//AT1G14210//AT1G75990//AT1G54050//ARR4//AT1G02160//ATGTF2H2//AT2G20270//AT2G21045//ATRPA2//AT2G15010//LCR70//AT2G39110//AXL//AT2G30930//AT2G39650
GO:0010035	response to inorganic substance	BP	0.0315400966081943	CYT1//ATCYSA//AT1G51090//TIN1//ATMYB96//AtZAT12//AT5G53680//ATNRT3.1//cpHsc70-2//ATTIP2;3//ATCBL9//AtCEST//CML24//HSP17.6II//ATCML9//MAPKKK20//CSDP1//AT4G32530//AT4G30660//AT4G18950//ATGPX6//AT0ZI1//DGD2//DREB2//PMZ//ATMT3//ATFKBP62//ATMBF1C//RCI2A//ANAC053//AT3G09440//ATCCS//PBG1//AT1G60970//PATL1//ANN5//ANAC013//ATMYB72//AT1G54050//AT2G21045//AT2G39110//ATGSTU2//AT2G39920
GO:0000160	phosphorelay signal transduction system	BP	0.0324858119290206	AtCAF1a//AT4G29780//ATMBF1C//AT1G76600//AT1G32920//ATMYB72//ARR4
GO:0006952	defense response	BP	0.032720669174687	CYT1//AT1G25275//AT1G51090//AT5G10695//AT3G56750//AT1G50740//ATPXG2//ANK//ATNRT3.1//ATNPR3//CML24//LSU2//AT5G17760//NOXY2//RBK1//AT5G01650//AT3G63380//ATCML9//AT3G46600//AtCAF1a//LHT7//ATBT1//AT4G24160//AT4G23680//AT4G18950//AT4G02550//DGD2//PMZ//DRB3//ATMT3//ATMYB30//LBD41//BZIP28//AT3G10040//NHL2//ATBSMT1//AT1G13340//AT1G76600//ATTI2//AT2G43535//AT1G07520//AT1G18740//ATMYB72//AT1G72850//ARR4//AT2G15010//LCR70//AT2G30930//AT2G39650
GO:0080134	regulation of response to stress	BP	0.0331218307098838	AT1G25275//AT5G10695//AT1G50740//ANK//ATNRT3.1//ATNPR3//LSU2//ATCML9//LHT7//ATBT1//AT4G18950//AT4G02550//DGD2//PMZ//ATMT3//BZIP28//AT1G13340//AT1G18740//ATMYB72//ARR4//AT2G30930
GO:0006714	sesquiterpenoid metabolic process	BP	0.034476358215757	NDP1//ABA4//ATNCED9//AT2G35733
GO:0002376	immune system process	BP	0.035205591229047	AT1G25275//AT5G10695//AT3G56750//AT1G50740//ANK//ATNRT3.1//ATNPR3//CML24//AT5G17760//RBK1//AT3G63380//ATCML9//AT3G46600//ATBT1//AT4G18950//DGD2//PMZ//DRB3//ATMT3//ATMYB30//LBD41//BZIP28//AT3G10040//NHL2//AT1G13340//AT1G76600//AT1G07520//AT1G18740//ATMYB72//ARR4//AT2G30930//AT2G39650
GO:0030968	endoplasmic reticulum unfolded protein r...	BP	0.0364877712577078	AT5G10695//AT1G50740//AtZAT12//AT3G63380//AT3G57450//LHT7//DGD2//BZIP28//AT2G39650
GO:0071369	cellular response to ethylene stimulus	BP	0.0378529511090161	RBK1//AtCAF1a//AT4G29780//ATMBF1C//AT1G76600//AT1G32920//ATMYB72
GO:0006986	response to unfolded protein	BP	0.0387733196571475	AT5G10695//AT1G50740//AtZAT12//AT3G63380//AT3G57450//LHT7//DGD2//BZIP28//AT2G39650
GO:0034620	cellular response to unfolded protein	BP	0.0387733196571475	AT5G10695//AT1G50740//AtZAT12//AT3G63380//AT3G57450//LHT7//DGD2//BZIP28//AT2G39650
GO:0035967	cellular response to topologically incor...	BP	0.0387733196571475	AT5G10695//AT1G50740//AtZAT12//AT3G63380//AT3G57450//LHT7//DGD2//BZIP28//AT2G39650
GO:0042398	cellular modified amino acid biosyntheti...	BP	0.0391810700831893	AT4G24380//AGP12//MAT4//RALFL22
GO:0009873	ethylene-activated signaling pathway	BP	0.0415420803986819	AtCAF1a//AT4G29780//ATMBF1C//AT1G76600//AT1G32920//ATMYB72
GO:0006979	response to oxidative stress	BP	0.0438980106601698	CYT1//ATCYSA//TIN1//AtZAT12//AT5G53680//cpHsc70-2//AtCEST//CML24//HSP17.6II//ATGPX5//MAPKKK20//ATGPX6//AT0ZI1//ATFKBP62//AGC2//ATMBF1C//AT3G09440//AT1G13340//ATCCS//AT1G60970//ATMYB72//AT1G54050
GO:0000302	response to reactive oxygen species	BP	0.0440094823011289	CYT1//TIN1//AT5G53680//cpHsc70-2//CML24//HSP17.6II//MAPKKK20//AT0ZI1//ATFKBP62//ATMBF1C//AT3G09440//ATCCS//AT1G60970//ATMYB72//AT1G54050
GO:0009891	positive regulation of biosynthetic proc...	BP	0.0440856347775133	AT2G33180//AT1G50740//SPT42//AT5G52960//AT5G38180//LSU2//AT5G10120//BME3//ATMT3//ATMBF1C//BZIP28//LGO//ANAC053//AT1G60970//ATELF5A-3//AT1G18740//ARR4//AXL//AT2G30930
GO:0006333	chromatin assembly or disassembly	BP	0.0442357875169785	AT5G65360//HTB11//AT4G30660//ATGPX6//AT3G09480//AT3G05810//AT2G28720//AT1G09200
GO:0019374	galactolipid metabolic process	BP	0.0442716385732113	DGD2//AtPEPC1//MAN1//ANAC013//AT1G52420
GO:0019375	galactolipid biosynthetic process	BP	0.0442716385732113	DGD2//AtPEPC1//MAN1//ANAC013//AT1G52420
GO:0016036	cellular response to phosphate starvatio...	BP	0.0450543191010254	AtGDPD2//AtPHR1//DGD2//AtPEPC1//MAN1//ANAC013
GO:0034655	nucleobase-containing compound catabolic...	BP	0.0496335695757982	RNS2//AT5G59830//AtCAF1a//PAB5
GO:0006366	transcription from RNA polymerase II pro...	BP	0.0531562505831344	SPT42//AT5G59140//BZIP28//NRPB6B//ATGTF2H2
GO:0009628	response to abiotic stimulus	BP	0.054396296951076	CYT1//ATCYSA//ATHB-2//AT1G25275//PKS4//AT1G51090//EXL1//AT5G10695//TIN1//ATMYB96//AtZAT12//ATMBD7//AT5G59830//ATSUMO2//AT5G53680//cpHsc70-2//BLOS2//ATTIP2;3//ATCBL9//AtCEST//CML24//HSP17.6II//RBK1//AT5G10120//ATXT1//AGP20//ATCML9//MAPKKK20//AtCAF1a//CSDP1//AtLa1//AT4G32530//AT4G30660//AT4G29780//AtPHR1//AT4G27280//DIC2//AT4G18950//ATGPX6//AT4G02550//DGD2//ABA4//DREB2//PMZ//ATMT3//ATFKBP62//ATMBF1C//IAA31//MAT4//LBD41//ATHSFA1E//RCI2A//BZIP28//ANAC053//AT3G10040//AT3G09440//PBG1//AT1G60970//PATL1//ELF4-L2//ANN5//ANAC013//AT1G18740//RPN12a//AT1G52420//AT1G14210//ATRHM1//AT1G54050//ARR4//AT2G20270//AXL//AT2G22880//ELF4//AT2G39650
GO:0048878	chemical homeostasis	BP	0.0548805568725319	AT3G63380//ATCML9//AtPHR1//AT4G24160//ATMT3//NDF4//ATCCS//GH3.17//ATCHX16//AXL
GO:0006629	lipid metabolic process	BP	0.0568274779780231	AT5G16010//AT5G59140//AtcPT4//AT5G57815//ATPXG2//ATB5-A//BKI1//AtGDPD2//AT5G18430//AtENODL17//AT5G14710//AT5G10120//AT5G06480//AT5G03600//NDP1//AT3G54210//DGAT2//UGT76E12//ABC33//DGD2//ABA4//ATMYB30//CCB1//AT3G19310//NDF4//AT3G26750//AtPEPC1//MAN1//GH3.17//PBG1//ATNCED9//ANAC013//AT1G36980//AT1G49740//RPN12a//AT1G52420//ATGSTU24//AT1G20950//CKS1//KAT1//AT2G35733//AXL//AT2G23780//AT2G19320//DVL11
GO:0000956	nuclear-transcribed mRNA catabolic proce...	BP	0.0587362802365184	AT5G59830//AtCAF1a//PAB5
GO:0006402	mRNA catabolic process	BP	0.0587362802365184	AT5G59830//AtCAF1a//PAB5
GO:0046916	cellular transition metal ion homeostasi...	BP	0.0587362802365184	AT3G63380//ATMT3//ATCCS
GO:0007623	circadian rhythm	BP	0.0610703537770092	BME3//AtPHR1//AT4G26670//ATGPX6//GATA1//ARR4//ELF4
GO:0048511	rhythmic process	BP	0.0610703537770092	BME3//AtPHR1//AT4G26670//ATGPX6//GATA1//ARR4//ELF4
GO:0019748	secondary metabolic process	BP	0.062139568427022	ATGPX5//AT3G44190//AT4G24160//ATGPX6//PMZ//AGP12//SRO2//NDF4//MAT4//ANAC053//RALFL22//PBG1//ATGSTU22//RPN12a//ATGSTU25//ATGSTU24//UGT1//ATGSTU2//ATGSTU1//AT2G38240//AT2G30930
GO:0009247	glycolipid biosynthetic process	BP	0.0630029248049217	DGD2//AtPEPC1//MAN1//ANAC013//AT1G52420
GO:0009642	response to light intensity	BP	0.0641932840891081	TIN1//AtZAT12//AT5G53680//cpHsc70-2//CML24//HSP17.6II//AtPHR1//ATFKBP62//ATMBF1C//AT3G09440//AT1G60970//RPN12a//AT1G54050
GO:0009695	jasmonic acid biosynthetic process	BP	0.065333700773109	AtZAT12//AT3G57450//AT4G24380//AT4G18950//ATBSMT1//AT1G32920
GO:0009626	plant-type hypersensitive response	BP	0.0663795464015132	AT5G10695//AT1G50740//ANK//ATNRT3.1//ATNPR3//ATBT1//AT4G18950//DGD2//PMZ//ATMT3//ATMYB30//BZIP28//AT1G18740//ARR4//AT2G30930
GO:0034050	host programmed cell death induced by sy...	BP	0.0687331088168611	AT5G10695//AT1G50740//ANK//ATNRT3.1//ATNPR3//ATBT1//AT4G18950//DGD2//PMZ//ATMT3//ATMYB30//BZIP28//AT1G18740//ARR4//AT2G30930
GO:0009962	regulation of flavonoid biosynthetic pro...	BP	0.0699379812412984	AT1G50740//ATMT3//AT1G18740//RPN12a//ARR4//AT2G30930
GO:0010363	regulation of plant-type hypersensitive ...	BP	0.0717360109304504	AT5G10695//AT1G50740//ANK//ATNRT3.1//ATNPR3//ATBT1//AT4G18950//DGD2//PMZ//ATMT3//BZIP28//AT1G18740//ARR4//AT2G30930
GO:0001666	response to hypoxia	BP	0.0738066988444464	EXL1//DGD2//LBD41//AT3G10040//AT1G52420
GO:0006664	glycolipid metabolic process	BP	0.0738066988444464	DGD2//AtPEPC1//MAN1//ANAC013//AT1G52420
GO:0009963	positive regulation of flavonoid biosynt...	BP	0.0738066988444464	AT1G50740//ATMT3//AT1G18740//ARR4//AT2G30930
GO:1903509	liposaccharide metabolic process	BP	0.0738066988444464	DGD2//AtPEPC1//MAN1//ANAC013//AT1G52420
GO:0009605	response to external stimulus	BP	0.0744126258374337	CYT1//AT1G25275//PKS4//AT1G51090//EXL1//AT3G56750//AT3G51870//AT1G50740//AtZAT12//ANK//ATNRT3.1//ATTIP2;3//ATNPR3//AtGDPD2//CML24//AT5G17760//NOXY2//RBK1//AT5G01650//AT3G63380//ATXT1//AGP20//AT3G57450//ATCML9//AtCAF1a//AT4G30660//AT4G29780//AtPHR1//AT4G27280//DIC2//AT4G24380//AT0ZI1//DGD2//DRB3//ATMYB30//IAA31//LBD41//BZIP28//AT3G10040//AT3G09440//NHL2//ATBSMT1//AtPEPC1//MAN1//AT1G33950//ANAC013//AT1G32920//AT1G18740//ATMYB72//AT2G21045//AT2G39110//ELF4//AT2G39650
GO:0009723	response to ethylene	BP	0.0747343857987332	AT5G65300//AT5G44990//RBK1//AtCAF1a//AT4G30390//AT4G29780//AT4G18950//PMZ//ATMYB30//ATMBF1C//AT1G76600//AT1G32920//ATMYB72
GO:0042592	homeostatic process	BP	0.0774773957607472	AT5G20500//AT1G77370//ATH2//AT5G13810//AT3G63380//ATCML9//ACHT2//AtPHR1//AT4G24160//ATMT3//NDF4//ATCCS//GH3.17//ATCHX16//AT2G20270//AXL
GO:0045088	regulation of innate immune response	BP	0.0813325684327874	AT5G10695//AT1G50740//ANK//ATNRT3.1//ATNPR3//ATBT1//AT4G18950//DGD2//PMZ//ATMT3//BZIP28//AT1G18740//ATMYB72//ARR4//AT2G30930
GO:0050776	regulation of immune response	BP	0.0840205885665752	AT5G10695//AT1G50740//ANK//ATNRT3.1//ATNPR3//ATBT1//AT4G18950//DGD2//PMZ//ATMT3//BZIP28//AT1G18740//ATMYB72//ARR4//AT2G30930
GO:0071103	DNA conformation change	BP	0.0848440136406076	AT5G65360//HTB11//CSDP1//AT3G09480//AT2G28720//AT1G09200
GO:0036293	response to decreased oxygen levels	BP	0.0855530253538719	EXL1//DGD2//LBD41//AT3G10040//AT1G52420
GO:0070482	response to oxygen levels	BP	0.0855530253538719	EXL1//DGD2//LBD41//AT3G10040//AT1G52420
GO:0000469	cleavage involved in rRNA processing	BP	0.0868739970899945	AtLa1//RPSAb
GO:0000478	endonucleolytic cleavage involved in rRN...	BP	0.0868739970899945	AtLa1//RPSAb
GO:0090501	RNA phosphodiester bond hydrolysis	BP	0.0868739970899945	AtLa1//RPSAb
GO:0090502	RNA phosphodiester bond hydrolysis, endo...	BP	0.0868739970899945	AtLa1//RPSAb
GO:0002682	regulation of immune system process	BP	0.0895663101629052	AT5G10695//AT1G50740//ANK//ATNRT3.1//ATNPR3//ATBT1//AT4G18950//DGD2//PMZ//ATMT3//BZIP28//AT1G18740//ATMYB72//ARR4//AT2G30930
GO:0050896	response to stimulus	BP	0.0902375031513162	CYT1//ATCYSA//AT2G41640//ATHB-2//ATRAB1C//AT1G25275//PKS4//AT1G51090//EXL1//AT5G10695//AT3G56750//AT3G51870//AT1G50740//AT5G65300//TIN1//ATMYB96//AtZAT12//ATMBD7//AT5G59830//AT5G59840//ATPXG2//ATSUMO2//ANK//AT5G53680//ATNRT3.1//cpHsc70-2//BLOS2//ATTIP2;3//ATCBL9//ATNPR3//AT5G44990//AtCEST//AtGDPD2//ACYB-1//CML24//LSU2//AT5G17760//HSP17.6II//NOXY2//RBK1//PROPEP4//AT5G10120//AT5G01650//AT3G63380//ATXT1//ATGPX5//AGP20//AT3G59350//AT3G57450//ATCML9//MAPKKK20//ATRAB-A2C//AT3G46600//AT3G44190//AtCAF1a//ATGB2//CSDP1//LHT7//AtCIB22//AtLa1//ATBT1//AT4G32530//AT4G30660//AT4G30390//AT4G29780//AtPHR1//AT4G27280//DIC2//AT4G24380//AT4G24160//AT4G23680//AT4G18950//ATGPX6//ABC33//AT4G02550//AT0ZI1//DGD2//AT4G10270//ABA4//DREB2//PMZ//AT3G25600//DRB3//ATMT3//ATMYB30//SRO2//ATFKBP62//AGC2//ASK9//AT3G19310//ATMBF1C//AT3G15630//IAA31//MAT4//LBD41//ATHSFA1E//ATRAB18C//RCI2A//BZIP28//ANAC053//AT3G10040//AT3G09440//NHL2//AT3G05500//ATBSMT1//AtPEPC1//AT1G13340//MAN1//ATCCS//GH3.17//PBG1//AT1G77730//AT1G60970//PATL1//ELF4-L2//AT1G76600//ANN5//AT1G33950//AT1G74410//AT1G68340//ATTI2//AT2G43535//AT1G32460//ATGSTU22//AT1G07520//ANAC013//AT1G32920//AT1G18740//AT1G49740//RPN12a//ATMYB72//AT1G52420//AT1G68670//AT1G72850//ATGSTU25//ATGSTU24//AT1G14210//AT1G75990//AT1G20950//ATRHM1//AT1G54050//UGT1//ARR4//AT2G15320//AtRABA5d//PS2//AT1G02160//ATGTF2H2//AT2G20270//AT2G21045//ATRPA2//AT2G15010//LCR70//AT2G39110//ATGSTU2//ATGSTU1//AXL//AT2G22880//AT2G38240//AT2G30930//AT2G39920//ELF4//AT2G39650
GO:0042542	response to hydrogen peroxide	BP	0.0902813382782577	TIN1//AT5G53680//cpHsc70-2//CML24//HSP17.6II//ATFKBP62//ATMBF1C//AT3G09440//AT1G60970//AT1G54050
GO:0035966	response to topologically incorrect prot...	BP	0.0924242712242681	AT5G10695//AT1G50740//AtZAT12//AT3G63380//AT3G57450//LHT7//AtCIB22//DGD2//ASK9//BZIP28//PBG1//RPN12a//ATGSTU24//AT1G75990//AT2G39650
GO:0043067	regulation of programmed cell death	BP	0.0941981540510614	AT5G10695//AT1G50740//ANK//ATNRT3.1//ATNPR3//ATBT1//AT4G18950//DGD2//PMZ//ATMT3//BZIP28//AT1G18740//ARR4//AT2G30930
GO:0007154	cell communication	BP	0.0969570700614177	ATHB-2//ATRAB1C//RALFL31//PKS4//AT5G10695//AT1G50740//AT5G65300//TIN1//AtZAT12//AT5G59840//ANK//ATTIP2;3//ATCBL9//ATNPR3//AtGDPD2//RBK1//AT5G10120//AT3G63380//AT3G57450//ATCML9//ATRAB-A2C//AT3G46600//AtCAF1a//ATGB2//LHT7//AT4G30660//AT4G30390//AT4G29780//AtPHR1//AT4G18950//ABC33//DGD2//PMZ//AT3G19310//ATMBF1C//LBD41//ATRAB18C//BZIP28//AT3G10040//RALFL22//AtPEPC1//AT1G13340//MAN1//AT1G77730//AT1G76600//AT1G07520//ANAC013//AT1G32920//AT1G49740//ATMYB72//AT1G72850//ATRHM1//ARR4//AT2G15320//AtRABA5d//PS2//AT2G21045//AT2G39110//AXL//ELF4//AT2G39650
GO:0080135	regulation of cellular response to stres...	BP	0.0972823954996961	AT5G10695//AT1G50740//ANK//ATNRT3.1//ATNPR3//ATBT1//AT4G18950//DGD2//PMZ//ATMT3//BZIP28//AT1G18740//ARR4//AT2G30930
GO:0006334	nucleosome assembly	BP	0.098218483624625	AT5G65360//HTB11//AT3G09480//AT2G28720//AT1G09200
GO:0034728	nucleosome organization	BP	0.098218483624625	AT5G65360//HTB11//AT3G09480//AT2G28720//AT1G09200
GO:0065004	protein-DNA complex assembly	BP	0.098218483624625	AT5G65360//HTB11//AT3G09480//AT2G28720//AT1G09200