GOID TERM ONTOLOGY pValue Genes GO:0048527 lateral root development BP 0.00521965341464998 UTr7//WPP2//ACH1//CYCA2;3//AT1G47485//SRD2 GO:0048528 post-embryonic root development BP 0.00786218699425221 UTr7//WPP2//ACH1//CYCA2;3//AT1G47485//SRD2 GO:0042991 transcription factor import into nucleus BP 0.0088865402275255 ATRH25//AT4G40000//ATMND1//AT1G60080 GO:0048442 sepal development BP 0.0118592429884131 AT5G60150//ATMSH6//AT2G22370//AT1G54840 GO:0048464 flower calyx development BP 0.0118592429884131 AT5G60150//ATMSH6//AT2G22370//AT1G54840 GO:0048569 post-embryonic organ development BP 0.0138018205688923 AT5G60150//GIL1//AT5G56040//UTr7//ATMSH6//AT3G24240//EMB2810//WPP2//ACH1//CYCA2;3//AT1G47485//SRD2//AT1G13230//AT2G22370//AT1G54840//AT2G20970//PGY1//POLD2 GO:0006066 alcohol metabolic process BP 0.0203248727959108 AtcPT4//AT5G56040//ATSIG5//AT5G03980//PLDBETA2//ATSDC1//AtCXE5//BDG1//AT1G70985//BBX25//KAS//AT2G39630 GO:1900864 mitochondrial RNA modification BP 0.0219685180066546 MORF1//MEF22 GO:0040034 regulation of development, heterochronic BP 0.02253967982567 AtIDD8//AGO7//AT2G22370 GO:0009560 embryo sac egg cell differentiation BP 0.0231246093908673 ATRH1//ATMND1//EMB2810//AT1G69210//POLD2 GO:0009561 megagametogenesis BP 0.0257367891531959 ATRH1//EDA9//ATMND1//EMB2810//AT1G69210//POLD2 GO:0007292 female gamete generation BP 0.0258042756662067 ATRH1//ATMND1//EMB2810//AT1G69210//POLD2 GO:0000959 mitochondrial RNA metabolic process BP 0.026438210962542 MORF1//MEF22 GO:0010224 response to UV-B BP 0.0286750398938616 UGT78D2//ATCHS//BBX31//AT1G06000//BBX25 GO:0042775 mitochondrial ATP synthesis coupled elec... BP 0.0312397803838285 CI51//SDH1-2 GO:0046165 alcohol biosynthetic process BP 0.0319823516590129 AtcPT4//AT5G56040//ATSIG5//AT5G03980//AtCXE5//BDG1//AT1G70985//BBX25//KAS//AT2G39630 GO:0006606 protein import into nucleus BP 0.033325584949957 ATRH1//ATRH25//AT4G40000//ATMND1//AT4G04940//AT1G60080 GO:0044744 protein targeting to nucleus BP 0.033325584949957 ATRH1//ATRH25//AT4G40000//ATMND1//AT4G04940//AT1G60080 GO:1902593 single-organism nuclear import BP 0.033325584949957 ATRH1//ATRH25//AT4G40000//ATMND1//AT4G04940//AT1G60080 GO:0034504 protein localization to nucleus BP 0.0347171104817702 ATRH1//ATRH25//AT4G40000//ATMND1//AT4G04940//AT1G60080 GO:0051170 nuclear import BP 0.0347171104817702 ATRH1//ATRH25//AT4G40000//ATMND1//AT4G04940//AT1G60080 GO:0006913 nucleocytoplasmic transport BP 0.0365307813444491 ATRH1//ATRH25//AT4G40000//ATMND1//AT4G04940//WPP2//AT1G60080 GO:0051169 nuclear transport BP 0.0365307813444491 ATRH1//ATRH25//AT4G40000//ATMND1//AT4G04940//WPP2//AT1G60080 GO:0006626 protein targeting to mitochondrion BP 0.038015727774014 ATRH1//AT5G38890//AT1G62730//TOM20-2 GO:0070585 protein localization to mitochondrion BP 0.038015727774014 ATRH1//AT5G38890//AT1G62730//TOM20-2 GO:0072655 establishment of protein localization to... BP 0.038015727774014 ATRH1//AT5G38890//AT1G62730//TOM20-2 GO:0048645 organ formation BP 0.0391356690301657 AT5G60150//ATMSH6//EMB2810//CYCA2;3//SRD2//AT1G54840//POLD2 GO:2000026 regulation of multicellular organismal d... BP 0.0409179486644532 AtHAM4//GIL1//ATET2//AT5G56040//AtIDD8//ASHR3//XTH9//AT3G02650//FLK//CLPS3//FLD//EMB2810//CYCA2;3//AT2G22370//TCP9//POLD2 GO:0010605 negative regulation of macromolecule met... BP 0.0438670848611964 AT5G66970//AZF3//ASHR3//ATMND1//ATMSH6//AGO7//CLPS3//EMB2810//CYCA2;3//ATMGD3//AT2G22370//POLD2 GO:0015996 chlorophyll catabolic process BP 0.0452518951309981 AT5G35970//AT4G11570//DEG1 GO:0046149 pigment catabolic process BP 0.0452518951309981 AT5G35970//AT4G11570//DEG1 GO:0048506 regulation of timing of meristematic pha... BP 0.0474590422662634 AtIDD8//AT2G22370 GO:0048510 regulation of timing of transition from ... BP 0.0474590422662634 AtIDD8//AT2G22370 GO:0048582 positive regulation of post-embryonic de... BP 0.0486611471531986 FLK//FLD//CYCA2;3 GO:0048646 anatomical structure formation involved ... BP 0.0497714812796559 AT5G60150//KCS15//ATMSH6//EMB2810//CYCA2;3//I9H//SRD2//AT1G54840//POLD2 GO:0000280 nuclear division BP 0.0507580973470053 EMB2656//ATMND1//ATMSH6//WPP2//CYCA2;3//emb1507//ASY3 GO:0006787 porphyrin-containing compound catabolic ... BP 0.0521925167046896 AT5G35970//AT4G11570//DEG1 GO:0033015 tetrapyrrole catabolic process BP 0.0521925167046896 AT5G35970//AT4G11570//DEG1 GO:0048447 sepal morphogenesis BP 0.0521925167046896 AT5G60150//ATMSH6//AT1G54840 GO:0048451 petal formation BP 0.0521925167046896 AT5G60150//ATMSH6//AT1G54840 GO:0048453 sepal formation BP 0.0521925167046896 AT5G60150//ATMSH6//AT1G54840 GO:0051187 cofactor catabolic process BP 0.0521925167046896 AT5G35970//AT4G11570//DEG1 GO:0009119 ribonucleoside metabolic process BP 0.0521927127937998 CI51//AT4G29580//ADK1//MAT3//SDH1-2 GO:0046173 polyol biosynthetic process BP 0.0526334691087951 ATSIG5//AT5G03980//AT1G70985//BBX25 GO:0010304 PSII associated light-harvesting complex... BP 0.0534146214571606 DEG1//FTSH8 GO:0051239 regulation of multicellular organismal p... BP 0.0548888607497952 AtHAM4//GIL1//ATET2//AT5G56040//AtIDD8//ASHR3//XTH9//AT3G02650//FLK//CLPS3//FLD//EMB2810//CYCA2;3//AT2G22370//TCP9//POLD2 GO:0009886 post-embryonic morphogenesis BP 0.0585524578350067 AT5G60150//AT5G56040//ABCG18//ATMSH6//AT3G24240//EMB2810//CYCA2;3//SRD2//AT1G13230//AT1G54840//AT2G20970//POLD2 GO:0006119 oxidative phosphorylation BP 0.059618467315028 CI51//SDH1-2 GO:0042773 ATP synthesis coupled electron transport BP 0.059618467315028 CI51//SDH1-2 GO:0009791 post-embryonic development BP 0.0631586683750404 ATRH1//EIF2//BASL//AT5G60150//GIL1//ATET2//AT5G56040//AtIDD8//EMB2656//AT5G19150//ABCG18//AT3G50990//UTr7//ASHR3//ATMSH6//AGO7//AT3G24240//TPR2//AT3G02650//FLK//CLPS3//FLD//EMB2810//WPP2//ACH1//ATSDC1//CYCA2;3//AT1G47485//SRD2//AT1G13230//emb1507//AT2G22370//AT1G54840//ARP1//AT2G20970//POLD2 GO:0000226 microtubule cytoskeleton organization BP 0.0662821525681416 AT5G17410//GIL1//D6PKL2//TPR2//CYCA2;3//POLD2 GO:0043094 cellular metabolic compound salvage BP 0.0684056713660889 RPT3//PBB2//CI51//ADK1//ENO2//AT2G20360 GO:0022412 cellular process involved in reproductio... BP 0.0684351689524524 ATRH1//ATMND1//EMB2810//AT1G69210//POLD2 GO:0048831 regulation of shoot system development BP 0.0713930292500451 AtHAM4//ASHR3//AT3G02650//FLK//CLPS3//FLD//EMB2810//TCP9//POLD2 GO:0009892 negative regulation of metabolic process BP 0.0720973578778216 AT5G66970//ATSBT5.4//AZF3//ASHR3//ATMND1//ATMSH6//AGO7//CLPS3//EMB2810//CYCA2;3//ATMGD3//AT2G22370//POLD2 GO:0009911 positive regulation of flower developmen... BP 0.0727118863657986 FLK//FLD GO:0042181 ketone biosynthetic process BP 0.0727118863657986 AtcPT4//ATCHS GO:0097164 ammonium ion metabolic process BP 0.0727118863657986 PLDBETA2//ATSDC1 GO:0009553 embryo sac development BP 0.0727702333139008 ATRH1//EDA9//ATMND1//EMB2810//AT1G69210//POLD2 GO:0010374 stomatal complex development BP 0.0727702333139008 BASL//AT5G56040//ABCG18//AT3G24240//CYCA2;3//AT1G13230 GO:0051240 positive regulation of multicellular org... BP 0.0758375884472956 FLK//FLD//CYCA2;3 GO:0002237 response to molecule of bacterial origin BP 0.0762198510328504 AT5G56040//AT5G52760//AT3G24240//AT1G13230 GO:0048441 petal development BP 0.0762198510328504 AT5G60150//ATMSH6//AT2G22370//AT1G54840 GO:0048465 corolla development BP 0.0762198510328504 AT5G60150//ATMSH6//AT2G22370//AT1G54840 GO:0048449 floral organ formation BP 0.078839005333689 AT5G60150//ATMSH6//EMB2810//AT1G54840//POLD2 GO:0007005 mitochondrion organization BP 0.0794872505185109 ATRH1//AT5G38890//AT1G62730//TOM20-2 GO:0010629 negative regulation of gene expression BP 0.0813052795390904 AT5G66970//AZF3//ASHR3//ATMND1//AGO7//CLPS3//EMB2810//ATMGD3//AT2G22370//POLD2 GO:0017038 protein import BP 0.0820721664746454 ATRH1//ATRH25//AT4G40000//ATMND1//AT4G04940//AT1G60080//TOM20-2 GO:0048285 organelle fission BP 0.0820721664746454 EMB2656//ATMND1//ATMSH6//WPP2//CYCA2;3//emb1507//ASY3 GO:0000338 protein deneddylation BP 0.0846031201918331 ATRH1//EIF2//AT3G02650 GO:0009718 anthocyanin-containing compound biosynth... BP 0.0846031201918331 UGT78D2//ATCHS//AT1G06000 GO:0010388 cullin deneddylation BP 0.0846031201918331 ATRH1//EIF2//AT3G02650 GO:0010311 lateral root formation BP 0.0866266477745076 CYCA2;3//SRD2 GO:1901264 carbohydrate derivative transport BP 0.0866266477745076 UTr7//AtG3Pp3 GO:0051094 positive regulation of developmental pro... BP 0.089140925297749 FLK//FLD//CYCA2;3 GO:0072594 establishment of protein localization to... BP 0.0897554869994693 ATRH1//AT5G66970//AT5G38890//ATRH25//AT4G40000//PLAT1//ATMND1//AT4G04940//AT1G62730//AT1G60080//TOM20-2 GO:0006807 nitrogen compound metabolic process BP 0.0931434161842568 AT2G47610//HDG4//AT5G19830//AtHAM4//GATA19//ATMYB44//AT5G66970//AT5G67220//IAA33//AT5G52760//HDG7//AtIDD8//AZF3//EMB2656//AT5G35970//ATSIG5//AT5G23550//AK//AT5G11870//CI51//AtLCD//EDA9//AGD2//ATDBR1//AT4G30000//AT4G29580//ATMND1//ATCBF2//MORF1//AT4G12270//AT4G11570//ANAC070//AT4G04940//ATMSH6//PLDBETA2//AGO7//AT1G35890//DEG1//BBX31//AT1G27820//TPR2//AT1G56310//MEF22//AT3G12910//AT3G02650//ADK1//CLPS3//OMR1//AT3G10470//AFP4//EMB2810//AT1G63210//NF-YA8//ATSDC1//CYCA2;3//SRD2//emb1507//BBX25//ATMGD3//AT1G60080//MAT3//ENO2//ATE2FA//AT2G22370//ARP1//TH-1//SDH1-2//ATHNIR//NATA1//AT2G22760//AT2G35430//AT2G39630//YCF37//AT2G35040//TCP9//ZFN2//POLD2 GO:1901564 organonitrogen compound metabolic proces... BP 0.0938195145099438 AT5G19830//AT5G35970//AT5G23550//AK//AT5G11870//CI51//AtLCD//EDA9//AGD2//AT4G30000//AT4G29580//AT4G12270//AT4G11570//AT4G04940//PLDBETA2//DEG1//AT3G02650//ADK1//CLPS3//OMR1//ATSDC1//MAT3//ENO2//TH-1//SDH1-2//ATHNIR//NATA1//AT2G39630//YCF37//AT2G35040 GO:0006312 mitotic recombination BP 0.0938591397510596 ATMND1//EMB2810 GO:0007276 gamete generation BP 0.0959380486064962 ATRH1//ATMND1//EMB2810//AT1G69210//POLD2 GO:0009116 nucleoside metabolic process BP 0.0959380486064962 CI51//AT4G29580//ADK1//MAT3//SDH1-2 GO:0010264 myo-inositol hexakisphosphate biosynthet... BP 0.0985138835780317 ATSIG5//AT1G70985//BBX25 GO:0032958 inositol phosphate biosynthetic process BP 0.0985138835780317 ATSIG5//AT1G70985//BBX25 GO:0033517 myo-inositol hexakisphosphate metabolic ... BP 0.0985138835780317 ATSIG5//AT1G70985//BBX25 GO:0042278 purine nucleoside metabolic process BP 0.100507019974785 CI51//ADK1//MAT3//SDH1-2 GO:0046128 purine ribonucleoside metabolic process BP 0.100507019974785 CI51//ADK1//MAT3//SDH1-2 GO:0033365 protein localization to organelle BP 0.101471761537933 ATRH1//AT5G66970//AT5G38890//ATRH25//AT4G40000//PLAT1//ATMND1//AT4G04940//AT1G62730//AT1G60080//TOM20-2 GO:0009853 photorespiration BP 0.102025189821684 RPT3//PBB2//CI51//ENO2//AT2G20360 GO:0042546 cell wall biogenesis BP 0.102329828001406 SVB//AtIAMT1//AtENODL19//ANAC070//AtCXE5//I9H//CSI1 GO:0048446 petal morphogenesis BP 0.103343805462894 AT5G60150//ATMSH6//AT1G54840 GO:0071704 organic substance metabolic process BP 0.104740593999916 DPE2//AT2G47610//HDG4//ATRH1//AT5G19510//AT5G19830//EIF2//AtHAM4//GATA19//AT1G51910//UGT78D2//AT5G36230//AT1G29720//ATMYB44//AT5G66970//AT5G67220//AT5G61170//ABCF1//ATSBT5.4//AtcPT4//RPT3//IAA33//AT5G56040//AtIAMT1//AT5G52760//HDG7//D6PKL2//PME5//AtIDD8//AZF3//CML37//PBB2//EMB2656//AT5G35970//ATSIG5//AT5G23550//ATCHS//AK//AT5G11870//AT5G11490//CI51//AT5G07150//AT5G03980//AT5G03600//AtLCD//KCS15//AT3G50990//AT3G50730//AT3G50050//PLAT1//EDA9//AGD2//ATDBR1//ASHR3//CDEF1//AT4G30000//AT4G29580//ATMND1//ATCBF2//CRK21//MORF1//AT4G12270//AT4G11570//ANAC070//AT4G05470//AT4G04940//XTH9//AT4G02010//ATMSH6//PLDBETA2//AT1G66930//AT1G51620//AGO7//AT1G35890//AT3G29330//AtBAM1//DEG1//AT3G24240//BBX31//AT1G27820//TPR2//AT1G56310//MEF22//AT3G12910//AT3G02650//AT3G02530//ADK1//ATH9//UBQ8//AT3G11830//CLPS3//OMR1//ATPDHK//FLD//AT3G10470//AT3G01850//AFP4//ATPIPK11//AT1G55210//EMB2810//AT1G66250//AT1G63210//AT1G68250//NF-YA8//ATSDC1//AT1G06000//AtCXE5//CYCA2;3//BDG1//AT1G56030//JAZ2//AT1G70985//I9H//FTSH8//AT1G62730//SRD2//emb1507//BBX25//ATMGD3//CSI1//AT1G60080//AT2G40250//MAT3//ENO2//ATE2FA//AT2G22370//SRF5//ARP1//AT1G09750//TH-1//KAS//AT2G20360//SDH1-2//SDG23//AT2G20970//ATHNIR//scpl26//NATA1//PGY1//AT2G22760//AtSLD2//AT2G35430//AT2G35540//AT2G44970//AT2G39630//YCF37//AT2G35040//TCP9//ZFN2//POLD2 GO:0000003 reproduction BP 0.104752776356908 ATRH1//ATET2//ATGRP-8//AT3G50990//ATMND1//ATMSH6//CLPS3//EMB2810//AT1G69210//emb1507//ATE2FA//ASY3//POLD2 GO:0051186 cofactor metabolic process BP 0.105152703368388 AT5G19830//AtcPT4//AT5G56040//AT5G35970//AT4G30000//AT4G11570//DEG1//CLPS3//MAT3//ENO2//KAS//YCF37 GO:0048444 floral organ morphogenesis BP 0.107644106944271 AT5G60150//ATMSH6//EMB2810//AT1G54840//AT2G20970//POLD2 GO:0048563 post-embryonic organ morphogenesis BP 0.107644106944271 AT5G60150//ATMSH6//EMB2810//AT1G54840//AT2G20970//POLD2 GO:2000243 positive regulation of reproductive proc... BP 0.108812919974035 FLK//FLD GO:0050793 regulation of developmental process BP 0.109131046347919 AtHAM4//GIL1//ATET2//AT5G56040//AtIDD8//ASHR3//XTH9//AGO7//AT3G02650//FLK//CLPS3//FLD//EMB2810//CYCA2;3//AT2G22370//TCP9//POLD2 GO:0009057 macromolecule catabolic process BP 0.114793790001395 DPE2//RPT3//PBB2//CI51//AT4G05470//AtBAM1//DEG1//TPR2//AT3G02530//UBQ8//OMR1//CYCA2;3//FTSH8//AT2G20360 GO:0044238 primary metabolic process BP 0.11515139318517 DPE2//AT2G47610//HDG4//ATRH1//AT5G19510//AT5G19830//EIF2//AtHAM4//GATA19//AT1G51910//AT5G36230//AT1G29720//ATMYB44//AT5G66970//AT5G67220//AT5G61170//ABCF1//ATSBT5.4//AtcPT4//RPT3//IAA33//AT5G56040//AtIAMT1//AT5G52760//HDG7//D6PKL2//PME5//AtIDD8//AZF3//PBB2//EMB2656//ATSIG5//AT5G23550//ATCHS//AK//AT5G11870//AT5G11490//CI51//AT5G07150//AT5G03980//AT5G03600//AtLCD//KCS15//AT3G50990//AT3G50730//AT3G50050//EDA9//AGD2//ATDBR1//ASHR3//CDEF1//AT4G30000//AT4G29580//ATMND1//ATCBF2//CRK21//MORF1//ANAC070//AT4G05470//AT4G04940//XTH9//AT4G02010//ATMSH6//PLDBETA2//AT1G66930//AT1G51620//AGO7//AT1G35890//AT3G29330//AtBAM1//DEG1//AT3G24240//BBX31//AT1G27820//TPR2//AT1G56310//MEF22//AT3G12910//AT3G02650//AT3G02530//ADK1//ATH9//UBQ8//AT3G11830//CLPS3//OMR1//ATPDHK//FLD//AT3G10470//AT3G01850//AFP4//ATPIPK11//EMB2810//AT1G66250//AT1G63210//AT1G68250//NF-YA8//ATSDC1//AtCXE5//CYCA2;3//BDG1//AT1G56030//I9H//FTSH8//AT1G62730//SRD2//emb1507//BBX25//ATMGD3//CSI1//AT1G60080//AT2G40250//MAT3//ENO2//ATE2FA//AT2G22370//SRF5//ARP1//AT1G09750//KAS//AT2G20360//SDH1-2//SDG23//AT2G20970//ATHNIR//scpl26//NATA1//PGY1//AT2G22760//AtSLD2//AT2G35430//AT2G35540//AT2G44970//AT2G39630//YCF37//AT2G35040//TCP9//ZFN2//POLD2 GO:0006275 regulation of DNA replication BP 0.11580274076951 ATMND1//ATMSH6//CYCA2;3//ATE2FA