GOID	TERM	ONTOLOGY	pValue	Genes
GO:0048507	meristem development	BP	0.00324958531140958	AT2G41620//HAT1//ACL5//AT5G51560//CAK1AT//BAM3//CLE44//AT3G06220//AT3G20010//CLPS3//AGL4//AT3G11560//AHL29//RKL1//ATCEL2//AT1G62770//RGF3//AT1G08590
GO:0009825	multidimensional cell growth	BP	0.0060763264299811	ACL5//TUB6//BAM3//ATGH9B1//ATEXP11//ATPIN7//ATEXP4
GO:0019932	second-messenger-mediated signaling	BP	0.00647365499999029	ACAM-3//GAMMA//FKBP15-2//CIPK11//bZIP21
GO:0010087	phloem or xylem histogenesis	BP	0.00888981961976391	CKI1//ACL5//CLE44//AtGH9B13//AT1G62770//ASL9
GO:0006284	base-excision repair	BP	0.0096737860041197	AT3G12710//AT1G75090//ATOGG1
GO:0009743	response to carbohydrate	BP	0.0107355572487567	AT2G41620//ATEOL1//GLT1//AT5G63190//ASN1//AT4G23870//AT4G08790//AT1G66180//CLPS3//AHL29//AtATL15//ATMPK1//AT2G42900//HHP3
GO:0010089	xylem development	BP	0.0116013978801197	ACL5//CLE44//AtGH9B13//AT1G62770//ASL9
GO:0016925	protein sumoylation	BP	0.0119934315655839	ATSUMO2//AT5G44710//ATSUMO1
GO:0009888	tissue development	BP	0.0148160246498192	AT2G41620//CKI1//HAT1//ACL5//PIP2;4//AT5G51560//TUB6//CAK1AT//BAM3//CLE44//AtGH9B13//AT3G06220//AtHB33//AT3G20010//UGD2//AFB2//CLPS3//ATCSLC06//AGL4//AT3G11560//AHL29//RKL1//ATCEL2//AT1G62770//ASL9//RGF3//AT1G02080//ATMPK1//AT1G08590//ATPIN7//AGC2-3
GO:0009933	meristem structural organization	BP	0.0161687555394513	AT2G41620//ACL5//BAM3//CLE44//AT3G06220//AT3G20010//CLPS3//AHL29//ATCEL2//AT1G62770
GO:0009624	response to nematode	BP	0.0172979649279279	ATPA2//STP12//AIT1//ACA1//ATCEL2
GO:0042547	cell wall modification involved in multi...	BP	0.0175112975037013	ATGH9B1//ATEXP11//ATEXP4
GO:0048532	anatomical structure arrangement	BP	0.0187100923740628	AT2G41620//ACL5//BAM3//CLE44//AT3G06220//AT3G20010//CLPS3//AHL29//ATCEL2//AT1G62770
GO:0009734	auxin-activated signaling pathway	BP	0.020493461940424	AT5G63190//AXR3//ATMPK1//AtPIF4
GO:0009081	branched-chain amino acid metabolic proc...	BP	0.0207164847679339	AT4G20930//IPMS1//AT2G31810
GO:0032446	protein modification by small protein co...	BP	0.0257649981549825	AT2G41620//AT5G61560//ATSUMO2//AT5G44710//ATL4//ATSUMO1//CLPS3//AT1G71020//AHL29//AtATL15
GO:0010014	meristem initiation	BP	0.0274208197768302	ACL5//BAM3//CLE44//AT3G06220//AT3G20010//ATCEL2//AT1G62770
GO:0009828	plant-type cell wall loosening	BP	0.0280253331128924	ATEXP11//ATEXPB1//ATEXP4
GO:0071365	cellular response to auxin stimulus	BP	0.0341352978859125	AT5G63190//AXR3//ATMPK1//AtPIF4
GO:0009067	aspartate family amino acid biosynthetic...	BP	0.0388148506982214	ATSUMO2//AT5G44710//ASN1//ALDH22A1//AT3G24120
GO:0046364	monosaccharide biosynthetic process	BP	0.0394035623584042	ATSUMO2//TUB6//PCK1//ATSUMO1//ATUGE1//PBC1//AtkdsA1//AT2G31810
GO:0006355	regulation of transcription, DNA-templat...	BP	0.0430152903481611	AT2G41620//CKI1//HAT1//DEAR4//BEH2//SHN3//AT5G63900//AT5G62610//AT5G58610//AT5G58620//AtTLP11//LEP//AT5G05090//AT5G02460//ATBZIP61//AL3//HAT22//GATA9//AtC3H49//AT4G27270//ATSUMO1//CRF2//AtDOF4.5//ATWRKY71//AT3G06220//AtHB33//AT3G20010//AT3G24120//AtERF98//ATSKL1//CLPS3//AGL4//CLP2//AT1G05920//AT1G01725//bZIP21//RTV1//anac016//AtBBX21//AT1G36060//AT2G40200//AXR3//HLH1//ATMPK1//AtPIF4//AT2G28200//GATA2//ATCTH
GO:1903506	regulation of nucleic acid-templated tra...	BP	0.0430152903481611	AT2G41620//CKI1//HAT1//DEAR4//BEH2//SHN3//AT5G63900//AT5G62610//AT5G58610//AT5G58620//AtTLP11//LEP//AT5G05090//AT5G02460//ATBZIP61//AL3//HAT22//GATA9//AtC3H49//AT4G27270//ATSUMO1//CRF2//AtDOF4.5//ATWRKY71//AT3G06220//AtHB33//AT3G20010//AT3G24120//AtERF98//ATSKL1//CLPS3//AGL4//CLP2//AT1G05920//AT1G01725//bZIP21//RTV1//anac016//AtBBX21//AT1G36060//AT2G40200//AXR3//HLH1//ATMPK1//AtPIF4//AT2G28200//GATA2//ATCTH
GO:2001141	regulation of RNA biosynthetic process	BP	0.0430152903481611	AT2G41620//CKI1//HAT1//DEAR4//BEH2//SHN3//AT5G63900//AT5G62610//AT5G58610//AT5G58620//AtTLP11//LEP//AT5G05090//AT5G02460//ATBZIP61//AL3//HAT22//GATA9//AtC3H49//AT4G27270//ATSUMO1//CRF2//AtDOF4.5//ATWRKY71//AT3G06220//AtHB33//AT3G20010//AT3G24120//AtERF98//ATSKL1//CLPS3//AGL4//CLP2//AT1G05920//AT1G01725//bZIP21//RTV1//anac016//AtBBX21//AT1G36060//AT2G40200//AXR3//HLH1//ATMPK1//AtPIF4//AT2G28200//GATA2//ATCTH
GO:0034284	response to monosaccharide	BP	0.0443603214418686	AT5G63190//ASN1//AT4G23870//AT4G08790//AT1G66180//AtATL15//AT2G42900
GO:0009646	response to absence of light	BP	0.0461905972854093	AHL22//GDH1//ASN1
GO:0052546	cell wall pectin metabolic process	BP	0.0461905972854093	AT1G66180//UGD2//AtkdsA1
GO:0009641	shade avoidance	BP	0.04665212240985	AtBBX21//HLH1
GO:0051252	regulation of RNA metabolic process	BP	0.0479582321883219	AT2G41620//CKI1//HAT1//DEAR4//BEH2//SHN3//AT5G63900//AT5G62610//AT5G58610//AT5G58620//AtTLP11//LEP//AT5G05090//AT5G02460//ATBZIP61//AL3//HAT22//GATA9//AtC3H49//AT4G27270//ATSUMO1//CRF2//AtDOF4.5//ATWRKY71//AT3G06220//AtHB33//AT3G20010//AT3G24120//AtERF98//ATSKL1//CLPS3//AGL4//CLP2//AT1G05920//AT1G01725//bZIP21//RTV1//anac016//AtBBX21//AT1G36060//AT2G40200//AXR3//HLH1//ATMPK1//AtPIF4//AT2G28200//GATA2//ATCTH
GO:0008202	steroid metabolic process	BP	0.0502999247520273	AHL22//CYP714A1//ATB5-B//TUB6//ORP3A//ATTSC13//AT1G66180//CYP705A22//HHP3
GO:0050794	regulation of cellular process	BP	0.0545902146932291	AT2G41620//CKI1//AHL22//HAT1//PKS4//DEAR4//BEH2//ACAM-3//ATEOL1//SHN3//GAMMA//AT5G63900//AT5G63190//AT5G62610//AT5G61560//AT5G58610//AT5G58620//ATRAN3//AT5G54020//AT5G51560//FKBP15-2//AtPP2-A6//AT5G24100//AtTLP11//LEP//AT5G12940//TUB6//AT5G05090//AT5G02460//ATBZIP61//SNRK2-2//AL3//AT4G38690//HAT22//LHT7//GATA9//AtC3H49//CAK1AT//GH3.5//AT4G27270//ATSUMO1//CRF2//AtDOF4.5//BAM3//APR//CIPK11//ATWRKY71//AT3G06220//AtHB33//AT3G20010//AT3G24120//AOC3//RIN4//AtERF98//ATSKL1//AFB2//CLPS3//AGL4//APRL5//AT1G15670//CLP2//ATY1//AHL29//RGL//AIT1//ATVLN2//AT1G07520//AtRLP1//AT1G05920//RKL1//PLL5//AT1G01725//bZIP21//RTV1//anac016//AT1G75990//AtBBX21//AT1G36060//AT2G40200//RGF3//AXR3//HLH1//AT1G02080//ATMPK1//AT1G08590//AGC2-3//AtPIF4//AT2G28200//LURP1//GATA2//CYP94C1//AtPRK2//ATCTH//AT2G30540
GO:0010468	regulation of gene expression	BP	0.0557211003015037	AT2G41620//CKI1//HAT1//DEAR4//BEH2//SHN3//AT5G63900//AT5G62610//AT5G58610//AT5G58620//AtTLP11//LEP//AT5G05090//AT5G02460//ATBZIP61//AL3//HAT22//GATA9//AtC3H49//AT4G27270//ATSUMO1//CRF2//AtDOF4.5//ATWRKY71//AT3G06220//AtHB33//AT3G20010//AT3G24120//AT3G12710//AtERF98//ATSKL1//CLPS3//AGL4//CLP2//AT1G75090//AT1G05920//AT1G01725//bZIP21//RTV1//ATOGG1//anac016//AtBBX21//AT1G36060//AT2G40200//RGF3//AXR3//HLH1//ATMPK1//AtPIF4//AT2G28200//GATA2//ATCTH
GO:0019722	calcium-mediated signaling	BP	0.0569840249409829	ACAM-3//CIPK11//bZIP21
GO:0010073	meristem maintenance	BP	0.0584687796551478	AT2G41620//HAT1//AT5G51560//CAK1AT//BAM3//AT3G20010//AT3G11560//RKL1//RGF3
GO:0051171	regulation of nitrogen compound metaboli...	BP	0.0596151404398696	AT2G41620//CKI1//HAT1//DEAR4//BEH2//ATEOL1//SHN3//AT5G63900//AT5G62610//AT5G58610//AT5G58620//AtTLP11//LEP//AT5G05090//AT5G02460//ATBZIP61//AL3//HAT22//GATA9//AtC3H49//GH3.5//AT4G27270//ATSUMO1//CRF2//AtDOF4.5//ATWRKY71//AT3G06220//AtHB33//AT3G20010//AT3G24120//AtERF98//ATSKL1//CLPS3//AGL4//CLP2//AT1G05920//AT1G01725//bZIP21//RTV1//anac016//AtBBX21//AT1G36060//AT2G40200//AXR3//HLH1//ATMPK1//AtPIF4//AT2G28200//GATA2//ATCTH
GO:0031326	regulation of cellular biosynthetic proc...	BP	0.0611116727636248	AT2G41620//CKI1//HAT1//DEAR4//BEH2//ATEOL1//SHN3//AT5G63900//AT5G62610//AT5G58610//AT5G58620//AtTLP11//LEP//AT5G05090//AT5G02460//ATBZIP61//AL3//HAT22//GATA9//AtC3H49//GH3.5//AT4G27270//ATSUMO1//CRF2//AtDOF4.5//ATWRKY71//AT3G06220//AtHB33//AT3G20010//AT3G24120//AtERF98//ATSKL1//CLPS3//AGL4//CLP2//AT1G05920//AT1G01725//bZIP21//RTV1//anac016//AtBBX21//AT1G36060//AT2G40200//AXR3//HLH1//ATMPK1//AtPIF4//AT2G28200//GATA2//ATCTH
GO:0065007	biological regulation	BP	0.0631071352210676	GH3.3//AT2G41620//CKI1//AHL22//HAT1//PKS4//ACL5//DEAR4//BEH2//ACAM-3//ATEOL1//SHN3//CYP714A1//GAMMA//AT5G63900//AT5G63190//AT5G62610//AT5G61560//AT5G58610//AT5G58620//ATCKX3//ATNHX3//ATRAN3//AT5G54020//AT5G51560//OLEO3//FKBP15-2//AT5G45480//AtPP2-A6//AT5G24100//AtTLP11//LEP//AT5G12940//TUB6//AT5G05090//AT5G02460//ATBZIP61//SNRK2-2//AL3//AT4G38690//EDA40//HAT22//LHT7//GATA9//AtC3H49//CAK1AT//GH3.5//AT4G27270//ATSUMO1//CRF2//AtDOF4.5//BAM3//PSBQ//APR//CIPK11//ATWRKY71//AT3G06220//AtHB33//AT3G20010//CYP705A22//AT3G24120//AOC3//AT3G12710//RIN4//AtERF98//AT3G28940//ATSKL1//AFB2//CLPS3//AGL4//AT3G11560//APRL5//AT1G15670//CLP2//ATY1//AT1G75090//AHL29//RGL//CRK3//AIT1//ATVLN2//AT1G07520//AtRLP1//AT1G05920//RKL1//PLL5//AT1G01725//ACA1//bZIP21//ATNRAMP6//RTV1//ATSTP1//ATOGG1//anac016//AT1G75990//AtBBX21//AT1G36060//AT2G40200//RGF3//AXR3//HLH1//AT1G02080//ATMPK1//AT1G08590//ATPIN7//AGC2-3//AtPIF4//AT2G28200//LURP1//GATA2//CYP94C1//AtPRK2//AT2G46220//ATCTH//AT2G30540
GO:0045229	external encapsulating structure organiz...	BP	0.0640121005062535	ACL5//AT5G64640//AT5G62080//TUB6//AT3G43270//BAM3//AT1G66180//UGD2//AT3G26110//AGL4//ATGH9B1//ATEXP11//ATPME2//AtkdsA1//ATPIN7//ATEXPB1//AtPRK2//AT2G02970//ATEXP4
GO:0006351	transcription, DNA-templated	BP	0.064974058848963	AT2G41620//CKI1//HAT1//DEAR4//BEH2//SHN3//AT5G63900//AT5G62610//AT5G58610//AT5G58620//AtTLP11//LEP//AT5G05090//AT5G02460//ATBZIP61//AL3//HAT22//nPAP//GATA9//AtC3H49//AT4G27270//ATSUMO1//CRF2//AtDOF4.5//ATWRKY71//AT3G06220//AtHB33//AT3G20010//AT3G24120//AtERF98//ATSKL1//CLPS3//AGL4//CLP2//AT1G05920//AT1G01725//bZIP21//RTV1//anac016//AtBBX21//AT1G36060//AT2G40200//AXR3//HLH1//ATMPK1//AT1G61700//AtPIF4//AT2G28200//GATA2//ATCTH
GO:0097659	nucleic acid-templated transcription	BP	0.064974058848963	AT2G41620//CKI1//HAT1//DEAR4//BEH2//SHN3//AT5G63900//AT5G62610//AT5G58610//AT5G58620//AtTLP11//LEP//AT5G05090//AT5G02460//ATBZIP61//AL3//HAT22//nPAP//GATA9//AtC3H49//AT4G27270//ATSUMO1//CRF2//AtDOF4.5//ATWRKY71//AT3G06220//AtHB33//AT3G20010//AT3G24120//AtERF98//ATSKL1//CLPS3//AGL4//CLP2//AT1G05920//AT1G01725//bZIP21//RTV1//anac016//AtBBX21//AT1G36060//AT2G40200//AXR3//HLH1//ATMPK1//AT1G61700//AtPIF4//AT2G28200//GATA2//ATCTH
GO:0042762	regulation of sulfur metabolic process	BP	0.0653265767366641	ATEOL1//GH3.5
GO:2000280	regulation of root development	BP	0.0653265767366641	ATEOL1//RGF3
GO:0032774	RNA biosynthetic process	BP	0.0673756643653998	AT2G41620//CKI1//HAT1//DEAR4//BEH2//SHN3//AT5G63900//AT5G62610//AT5G58610//AT5G58620//AtTLP11//LEP//AT5G05090//AT5G02460//ATBZIP61//AL3//HAT22//nPAP//GATA9//AtC3H49//AT4G27270//ATSUMO1//CRF2//AtDOF4.5//ATWRKY71//AT3G06220//AtHB33//AT3G20010//AT3G24120//AtERF98//ATSKL1//CLPS3//AGL4//CLP2//AT1G05920//AT1G01725//bZIP21//RTV1//anac016//AtBBX21//AT1G36060//AT2G40200//AXR3//HLH1//ATMPK1//AT1G61700//AtPIF4//AT2G28200//GATA2//ATCTH
GO:0006694	steroid biosynthetic process	BP	0.0678331271548824	AHL22//CYP714A1//ATB5-B//TUB6//ATTSC13//AT1G66180//CYP705A22//HHP3
GO:0019319	hexose biosynthetic process	BP	0.0697588035791875	ATSUMO2//TUB6//PCK1//ATSUMO1//ATUGE1//PBC1//AT2G31810
GO:0048438	floral whorl development	BP	0.0746902107057472	HAT1//AT5G66230//AT5G10880//BAM3//AT3G06220//AFB2//AGL4//AT1G32730//ATCEL2//ATMPK1//AT1G08590//AGC2-3//AT2G02970//AT2G30540
GO:0070647	protein modification by small protein co...	BP	0.0748416046270825	AT2G41620//AT5G61560//ATSUMO2//AT5G44710//ATL4//ATSUMO1//CLPS3//AT1G71020//AHL29//AtATL15//AT2G28200
GO:0010393	galacturonan metabolic process	BP	0.075175766246173	AT1G66180//UGD2//AtkdsA1
GO:0035725	sodium ion transmembrane transport	BP	0.075175766246173	ATMHX//ATNHX3//ATCAX11
GO:0045488	pectin metabolic process	BP	0.075175766246173	AT1G66180//UGD2//AtkdsA1
GO:0006743	ubiquinone metabolic process	BP	0.0754452659607631	AT2G03690//CAC3
GO:0006744	ubiquinone biosynthetic process	BP	0.0754452659607631	AT2G03690//CAC3
GO:0065008	regulation of biological quality	BP	0.0777107191465743	GH3.3//AT2G41620//AHL22//ACL5//CYP714A1//ATCKX3//ATNHX3//OLEO3//AT5G45480//TUB6//EDA40//GH3.5//BAM3//PSBQ//APR//AT3G20010//CYP705A22//AT3G28940//ATSKL1//CLPS3//APRL5//ATY1//AHL29//ACA1//ATNRAMP6//AT1G02080//ATPIN7//AtPIF4//AT2G30540
GO:0009086	methionine biosynthetic process	BP	0.0789456267491108	ATSUMO2//AT5G44710//ALDH22A1//AT3G24120
GO:0043473	pigmentation	BP	0.0797810463931734	ACL5//TUB6//BAM3//AGL4//ATPIN7
GO:0043476	pigment accumulation	BP	0.0797810463931734	ACL5//TUB6//BAM3//AGL4//ATPIN7
GO:0043478	pigment accumulation in response to UV l...	BP	0.0797810463931734	ACL5//TUB6//BAM3//AGL4//ATPIN7
GO:0043479	pigment accumulation in tissues in respo...	BP	0.0797810463931734	ACL5//TUB6//BAM3//AGL4//ATPIN7
GO:0043480	pigment accumulation in tissues	BP	0.0797810463931734	ACL5//TUB6//BAM3//AGL4//ATPIN7
GO:0043481	anthocyanin accumulation in tissues in r...	BP	0.0797810463931734	ACL5//TUB6//BAM3//AGL4//ATPIN7
GO:0042180	cellular ketone metabolic process	BP	0.0805016121703014	ATEOL1//CLPP2//AT1G21680//AT2G03690//AT2G16710//CAC3
GO:0042445	hormone metabolic process	BP	0.0815403987403146	AHL22//CYP714A1//ATCKX3//AT5G45480//TUB6//EDA40//APR//CYP705A22//AT3G28940//ATSKL1//AtPIF4
GO:0048447	sepal morphogenesis	BP	0.0817432947938356	AT5G66230//AT3G06220//AT1G32730
GO:0048451	petal formation	BP	0.0817432947938356	AT5G66230//AT3G06220//AT1G32730
GO:0048453	sepal formation	BP	0.0817432947938356	AT5G66230//AT3G06220//AT1G32730
GO:0009416	response to light stimulus	BP	0.082111160913507	AT2G41620//AHL22//PKS4//ACL5//GDH1//TUB6//ANN6//RPL23A2//ASN1//GATA9//AT4G31430//BAM3//AT1G66180//AT3G24120//CLPS3//AGL4//AHL29//AtRLP1//AtATL15//AtBBX21//HLH1//ATPIN7//AtPIF4//AT2G28200//GATA2//AT2G22880
GO:0044283	small molecule biosynthetic process	BP	0.0821410649609077	AHL22//CYP714A1//ATSUMO2//ATB5-B//AT5G45480//AT5G44710//TUB6//AtHNL//PANB2//ATTSC13//ASN1//NAGS2//APR//CIPK11//ALDH22A1//AT3G12320//AT1G66180//UGD2//CYP705A22//AT3G24120//AOC3//AT3G28940//ATSKL1//IPMS1//AtkdsA1//KCS12//AT2G31810//AT2G03690//LURP1//HHP3//CAC3//CYP94C1//ACC4
GO:0009066	aspartate family amino acid metabolic pr...	BP	0.0839501640647174	ATSUMO2//AT5G44710//ASN1//ALDH22A1//AT3G24120
GO:0009108	coenzyme biosynthetic process	BP	0.0839501640647174	PANB2//ATSKL1//CLPS3//AT2G03690//CAC3
GO:0034285	response to disaccharide	BP	0.0851528548948003	GLT1//AT5G63190//ASN1//AT4G23870//AT4G08790//AT2G42900//HHP3
GO:0006949	syncytium formation	BP	0.0860205716932931	AT3G55420//ATEXP4
GO:0010556	regulation of macromolecule biosynthetic...	BP	0.0879992449862308	AT2G41620//CKI1//HAT1//DEAR4//BEH2//SHN3//AT5G63900//AT5G62610//AT5G58610//AT5G58620//AtTLP11//LEP//AT5G05090//AT5G02460//ATBZIP61//AL3//HAT22//GATA9//AtC3H49//AT4G27270//ATSUMO1//CRF2//AtDOF4.5//ATWRKY71//AT3G06220//AtHB33//AT3G20010//AT3G24120//AtERF98//ATSKL1//CLPS3//AGL4//CLP2//AT1G05920//AT1G01725//bZIP21//RTV1//anac016//AtBBX21//AT1G36060//AT2G40200//AXR3//HLH1//ATMPK1//AtPIF4//AT2G28200//GATA2//ATCTH
GO:2000112	regulation of cellular macromolecule bio...	BP	0.0879992449862308	AT2G41620//CKI1//HAT1//DEAR4//BEH2//SHN3//AT5G63900//AT5G62610//AT5G58610//AT5G58620//AtTLP11//LEP//AT5G05090//AT5G02460//ATBZIP61//AL3//HAT22//GATA9//AtC3H49//AT4G27270//ATSUMO1//CRF2//AtDOF4.5//ATWRKY71//AT3G06220//AtHB33//AT3G20010//AT3G24120//AtERF98//ATSKL1//CLPS3//AGL4//CLP2//AT1G05920//AT1G01725//bZIP21//RTV1//anac016//AtBBX21//AT1G36060//AT2G40200//AXR3//HLH1//ATMPK1//AtPIF4//AT2G28200//GATA2//ATCTH
GO:0002237	response to molecule of bacterial origin	BP	0.0882322373278627	AT5G61560//RIN4//AFB2//GLI1//AT1G08590
GO:0048442	sepal development	BP	0.0885488317775481	AT5G66230//AT3G06220//AT1G32730
GO:0048464	flower calyx development	BP	0.0885488317775481	AT5G66230//AT3G06220//AT1G32730
GO:0006555	methionine metabolic process	BP	0.0892120860013699	ATSUMO2//AT5G44710//ALDH22A1//AT3G24120
GO:0048441	petal development	BP	0.0892120860013699	AT5G66230//AT3G06220//AGL4//AT1G32730
GO:0048465	corolla development	BP	0.0892120860013699	AT5G66230//AT3G06220//AGL4//AT1G32730
GO:0019219	regulation of nucleobase-containing comp...	BP	0.0900200116857624	AT2G41620//CKI1//HAT1//DEAR4//BEH2//SHN3//AT5G63900//AT5G62610//AT5G58610//AT5G58620//AtTLP11//LEP//AT5G05090//AT5G02460//ATBZIP61//AL3//HAT22//GATA9//AtC3H49//AT4G27270//ATSUMO1//CRF2//AtDOF4.5//ATWRKY71//AT3G06220//AtHB33//AT3G20010//AT3G24120//AtERF98//ATSKL1//CLPS3//AGL4//CLP2//AT1G05920//AT1G01725//bZIP21//RTV1//anac016//AtBBX21//AT1G36060//AT2G40200//AXR3//HLH1//ATMPK1//AtPIF4//AT2G28200//GATA2//ATCTH
GO:0071555	cell wall organization	BP	0.0903577808810685	ACL5//AT5G64640//TUB6//AT3G43270//BAM3//AT1G66180//UGD2//AT3G26110//AGL4//ATGH9B1//ATEXP11//ATPME2//AtkdsA1//ATPIN7//ATEXPB1//AtPRK2//ATEXP4
GO:0010817	regulation of hormone levels	BP	0.0903991675889665	AHL22//ACL5//CYP714A1//ATCKX3//AT5G45480//TUB6//EDA40//BAM3//APR//CYP705A22//AT3G28940//ATSKL1//ATPIN7//AtPIF4
GO:0060255	regulation of macromolecule metabolic pr...	BP	0.0923280830477771	AT2G41620//CKI1//HAT1//DEAR4//BEH2//SHN3//AT5G63900//AT5G62610//AT5G58610//AT5G58620//AtTLP11//LEP//AT5G05090//AT5G02460//ATBZIP61//AL3//HAT22//GATA9//AtC3H49//CAK1AT//AT4G27270//ATSUMO1//CRF2//AtDOF4.5//ATWRKY71//AT3G06220//AtHB33//AT3G20010//AT3G24120//AT3G12710//AtERF98//ATSKL1//CLPS3//AGL4//CLP2//AT1G75090//AT1G05920//AT1G01725//bZIP21//RTV1//ATOGG1//anac016//AT1G75990//AtBBX21//AT1G36060//AT2G40200//RGF3//AXR3//HLH1//ATMPK1//AtPIF4//AT2G28200//GATA2//ATCTH
GO:0009658	chloroplast organization	BP	0.0926260794864624	STY46//AtCNFU1//EMB3123//ATSKL1//CLP2
GO:0009695	jasmonic acid biosynthetic process	BP	0.0926260794864624	AtHNL//CIPK11//AOC3//ATSKL1//CYP94C1
GO:0006814	sodium ion transport	BP	0.0955836070823977	ATMHX//ATNHX3//ATCAX11
GO:0009831	plant-type cell wall modification involv...	BP	0.0970076595296859	ATEXP11//ATEXP4
GO:0071472	cellular response to salt stress	BP	0.0970076595296859	ATBPM5//ATBPM2
GO:0010467	gene expression	BP	0.0970254422432301	AT2G41620//CKI1//HAT1//AT4G17610//DEAR4//BEH2//AT5G27850//SHN3//AT5G63900//AT5G62610//AT5G58610//AT5G58620//ATSUMO2//ATRAN3//AT5G45590//AT5G44710//AtTLP11//AT5G15390//LEP//AT5G10880//AT5G05090//AT5G02460//ATBZIP61//RPL23A2//AL3//HAT22//nPAP//GATA9//AtC3H49//AT4G27270//ATSUMO1//CRF2//AtDOF4.5//ATWRKY71//ALDH22A1//AT3G06220//AtHB33//AT3G20010//AT3G24120//AT3G12710//AtERF98//EMB3123//ATSKL1//CLPS3//AT3G02080//AGL4//CLP2//AT1G75090//AT1G05920//AT1G01725//bZIP21//RTV1//ATOGG1//anac016//AtBBX21//AT1G36060//AT2G40200//RGF3//AXR3//RPS15//HLH1//ATMPK1//AT1G61700//AtPIF4//AT2G28200//GATA2//PGY1//ATCTH
GO:0042592	homeostatic process	BP	0.098466210797409	GH3.3//AT2G41620//ATNHX3//GH3.5//PSBQ//APR//APRL5//ATY1//ACA1//ATNRAMP6//AtPIF4//AT2G30540
GO:0042398	cellular modified amino acid biosyntheti...	BP	0.10283859924454	AT5G66230//PANB2//ATVLN2
GO:0009639	response to red or far red light	BP	0.106397557953301	AT2G41620//AHL22//PKS4//ACL5//ANN6//CLPS3//AHL29//AtBBX21//HLH1//AtPIF4
GO:0009567	double fertilization forming a zygote an...	BP	0.108364282676255	KPL//ORP3A
GO:0042181	ketone biosynthetic process	BP	0.108364282676255	AT2G03690//CAC3
GO:1901661	quinone metabolic process	BP	0.108364282676255	AT2G03690//CAC3
GO:1901663	quinone biosynthetic process	BP	0.108364282676255	AT2G03690//CAC3
GO:0009889	regulation of biosynthetic process	BP	0.109150506769534	AT2G41620//CKI1//HAT1//DEAR4//BEH2//ATEOL1//SHN3//AT5G63900//AT5G62610//AT5G58610//AT5G58620//AtTLP11//LEP//AT5G05090//AT5G02460//ATBZIP61//AL3//HAT22//GATA9//AtC3H49//GH3.5//AT4G27270//ATSUMO1//CRF2//AtDOF4.5//ATWRKY71//AT3G06220//AtHB33//AT3G20010//AT3G24120//AtERF98//ATSKL1//CLPS3//AGL4//CLP2//AT1G05920//AT1G01725//bZIP21//RTV1//anac016//AtBBX21//AT1G36060//AT2G40200//AXR3//HLH1//ATMPK1//AtPIF4//AT2G28200//GATA2//ATCTH
GO:0009991	response to extracellular stimulus	BP	0.10929241264099	ATBPM5//ATEOL1//AT1G51840//PIP2;4//ASN1//PCK1//AT4G30170//ATBPM2//AT1G66180//AtATL15
GO:0048513	organ development	BP	0.111215048825815	AT2G41620//HAT1//ACL5//ATEOL1//DGR2//AT5G66230//PIP2;4//AT5G51560//TUB6//AT5G10880//CAK1AT//CRF2//BAM3//CLE44//AT3G06220//AT3G20010//UGD2//ATSKL1//AFB2//CLPS3//ATCSLC06//AGL4//AT3G11560//AHL29//RGL//RKL1//PLL5//AT1G32730//ATCEL2//AT1G62770//RGF3//ATMPK1//AT1G08590//ATPIN7//AGC2-3//PGY1//AT2G02970//AT2G30540
GO:0009851	auxin biosynthetic process	BP	0.116222271835688	AT5G45480//APR//AT3G28940//ATSKL1//AtPIF4