GOID TERM ONTOLOGY pValue Genes GO:0000041 transition metal ion transport BP 0.000796936554767661 AT5G20550//AT5G26280//CYP86//AtPP2-A8//AT5G37990//AT5G23830//CYP86B1//AT4G26470//AT4G20390//AT3G22570//AT3G23090//HRS1//SEL1//AtWRKY35 GO:0044550 secondary metabolite biosynthetic proces... BP 0.00629150144272039 CYP86//CYP86B1//ATRING1//CYP84A1//ATSERAT2;2//UMAMIT47//ATGPAT5//ATMYC2//ECT8//FMO//FMO//UMAMIT12//AT2G23910//AKN1//ATGSTF10 GO:0044262 cellular carbohydrate metabolic process BP 0.00816632935265079 AT-BETA-AMY//ATESD4//ATCSLB05//CYP705A1//BGAL7//SHA1//AT5G63370//AT5G59700//A/N-InvE//ATISA3//GDPDL1//AT3G19000//QQS//GDPDL5//AT3G23090//ATCUL3B//ATCSLE1//AT1G07280//AT2G27360//CVL1//AT2G35680//FEI2//ATXTH21//AKN1//AT2G45720 GO:0007623 circadian rhythm BP 0.00885951559936899 APRR1//BBX8//GATA9//AT4G02630//BBX7//AT1G53035//AT2G21130//AtRIBA2//ELF4 GO:0048511 rhythmic process BP 0.00885951559936899 APRR1//BBX8//GATA9//AT4G02630//BBX7//AT1G53035//AT2G21130//AtRIBA2//ELF4 GO:0030001 metal ion transport BP 0.0102111367596893 AT5G20550//AT5G26280//CYP86//AtPP2-A8//AT5G37990//AT5G23830//CYP86B1//AT4G26470//AKT2//AT4G20390//AT3G22570//AT3G23090//HRS1//JAL35//CIPK9//ACA1//SEL1//ATCHX16//ATCNGC6//ATGSTF10//AtWRKY35 GO:0001676 long-chain fatty acid metabolic process BP 0.0142458925222725 ALPHA//CER8//AT1G06100 GO:0019751 polyol metabolic process BP 0.0142674357711035 AKT2//GDPDL1//GDPDL5//AT2G27360//CVL1//AT2G35680 GO:0015893 drug transport BP 0.0165633823235038 ABCG19//AT4G22790//AT3G26590//AT1G71870//ABCG33 GO:0042493 response to drug BP 0.0165633823235038 ABCG19//AT4G22790//AT3G26590//AT1G71870//ABCG33 GO:0016144 S-glycoside biosynthetic process BP 0.0185061054100514 ATRING1//ATSERAT2;2//UMAMIT47//ATMYC2//FMO//FMO//UMAMIT12//AKN1//ATGSTF10 GO:0019758 glycosinolate biosynthetic process BP 0.0185061054100514 ATRING1//ATSERAT2;2//UMAMIT47//ATMYC2//FMO//FMO//UMAMIT12//AKN1//ATGSTF10 GO:0019761 glucosinolate biosynthetic process BP 0.0185061054100514 ATRING1//ATSERAT2;2//UMAMIT47//ATMYC2//FMO//FMO//UMAMIT12//AKN1//ATGSTF10 GO:0009817 defense response to fungus, incompatible... BP 0.0199719349199688 ATNPR4//ATMLO6//ATDABB1//ATMES7 GO:0044275 cellular carbohydrate catabolic process BP 0.0199719349199688 AT-BETA-AMY//BGAL7//A/N-InvE//ATISA3 GO:0009269 response to desiccation BP 0.0224974505797021 ERD10//COR413-TM1//ATMYC2//ATGSTF10 GO:0006633 fatty acid biosynthetic process BP 0.0226584846661434 AT5G38020//CYP86B1//PSY//ATH1//CER8//AT1G06100//ATGSTF10 GO:0009069 serine family amino acid metabolic proce... BP 0.0238847491636878 AT5G04120//AT5G23820//ATH1//AT4G23670//ATSERAT2;2//JAL35//BLH1//ACR3//FMO//ATGSTF10 GO:0009813 flavonoid biosynthetic process BP 0.027482782237264 AT5G20550//AT4G36500//UGT78D2//UF3GT//ATGSTF12//AT1G19960//ATMYC2//BLH1//ECT8//AT2G23910 GO:0000272 polysaccharide catabolic process BP 0.0281090390030191 AT-BETA-AMY//ATBX3//ATISA3//FEI2 GO:0009734 auxin-activated signaling pathway BP 0.0281090390030191 IAA9//AIL5//AT4G35030//AT1G78990 GO:0019748 secondary metabolic process BP 0.0289006887600166 CYP86//AT5G38710//CYP86B1//ATGSTF12//ATRING1//CYP84A1//ATH1//AT4G26470//ATSERAT2;2//UMAMIT47//ATGPAT5//ATMYC2//ATGSTU26//LAC5//ECT8//FMO//FMO//UMAMIT12//AT2G23910//AKN1//ATGSTF10 GO:0006631 fatty acid metabolic process BP 0.0308855416405966 CYP86//AT5G38020//CYP86B1//PSY//ATH1//ALPHA//CER8//AT1G06100//AT1G71870//NQR//BPE//AT1G06550//ATGSTF10 GO:0098771 inorganic ion homeostasis BP 0.0309394154873136 GDPDL1//AtCRT1a//CIPK9//ACA1//ATCHX16//AtG3Pp5 GO:0006071 glycerol metabolic process BP 0.0330107661314751 GDPDL1//GDPDL5//AT2G27360 GO:0019400 alditol metabolic process BP 0.0330107661314751 GDPDL1//GDPDL5//AT2G27360 GO:0009736 cytokinin-activated signaling pathway BP 0.0344823571754793 AT1G78990//SPY//AT1G69580//AT2G43670 GO:0045596 negative regulation of cell differentiat... BP 0.0344823571754793 ATESD4//SHA1//MSI3//AG GO:0071368 cellular response to cytokinin stimulus BP 0.0344823571754793 AT1G78990//SPY//AT1G69580//AT2G43670 GO:0050896 response to stimulus BP 0.0345121802239661 GH3.3//AT5G12420//AT-BETA-AMY//PGN//ATIWS1//FRS10//AT4G36500//AT3G44820//UGT78D2//ATTBP3//ATBT4//IAA9//PROPEP3//SHA1//APRR1//AT5G59845//AIL5//UF3GT//AT5G45840//ATWRKY16//AtPP2-A8//LCR77//COR27//AT5G42140//AT5G40910//AT5G40470//ABCB27//AT5G38710//AT5G24100//FRS12//ATGSTF12//ABCG6//ATRING1//AT5G07340//RUL1//ATNAS1//AT3G59845//SIP2//ABCG19//CRR2//CYP84A1//MSI3//AT4G35030//LKR//GATA9//ATH1//AT4G30660//AT4G30650//AT4G26470//AT4G23670//AT4G22790//AKT2//ATNPR4//AT4G19010//AT4G09420//Prx37//MAPKKK9//ALN//FMO1//AtCRT1a//AT1G66510//AT3G26460//AT3G22570//G6PD5//ATSERAT2;2//AT3G22104//GPK1//AT3G26590//PDF1.2b//AT1G78990//AT3G23090//AT3G28450//AtRLP33//PYD4//BBX7//SPY//HRS1//JAL35//ERD10//SNRK2-10//COR413-TM1//AT1G69580//AT1G68850//ALPHA//AT1G74450//AT1G63750//TAF2//CER8//AT2G43670//AT1G08050//AT1G06100//RFO1//AT1G71870//CIPK9//NQR//ACA1//ATMYC2//ATHKL1//BPE//SEL1//PHO1;H1//AT1G72850//ATGSTU26//AT1G06550//AT2G16250//ATCUL3//CPC//LAC5//BLH1//AT2G21130//ECT8//AtGolS4//ATMLO6//ATDABB1//AT2G35680//FEI2//ABCG33//LCR70//ATOEP16-1//ATPSKR1//ANN3//ATCNGC6//AT2G23910//AT2G39360//ATMES7//ATGSTF10//ELF4//AtWRKY35//CYP71A12 GO:0045595 regulation of cell differentiation BP 0.0353555883462183 ATESD4//SHA1//MSI3//AG//ATCUL3B//CPC GO:1901606 alpha-amino acid catabolic process BP 0.0367613243940812 STR16//UPM1//AT5G38710//AT5G23820//LKR//ATH1//ATSERAT2;2//ATGSTF10 GO:0009063 cellular amino acid catabolic process BP 0.0386389649370048 STR16//UPM1//AT5G38710//AT5G23820//LKR//ATH1//ATSERAT2;2//ATGSTF10 GO:0080167 response to karrikin BP 0.0401586275592262 UGT78D2//COR27//LKR//AT1G06550//AT2G23910//ELF4 GO:0010224 response to UV-B BP 0.0423822968967208 UGT78D2//UF3GT//ATGSTF12//CYP84A1//AT2G23910 GO:0044264 cellular polysaccharide metabolic proces... BP 0.0434342168011808 AT-BETA-AMY//ATESD4//ATCSLB05//CYP705A1//SHA1//AT5G63370//AT5G59700//A/N-InvE//ATISA3//AT3G19000//QQS//AT3G23090//ATCUL3B//ATCSLE1//AT1G07280//FEI2//ATXTH21//AT2G45720 GO:0009753 response to jasmonic acid BP 0.0443578971866014 ATTBP3//ATBT4//SHA1//LCR77//AT5G38710//ATRING1//ATNPR4//AtRLP33//JAL35//AT1G08050//ATMYC2//BPE//CPC//ATDABB1//ATOEP16-1 GO:0051240 positive regulation of multicellular org... BP 0.0454907635989982 ATESD4//AIL5//ATCUL3//CPC GO:0009699 phenylpropanoid biosynthetic process BP 0.0457166770975113 CYP86//CYP86B1//CYP84A1//ATGPAT5//ECT8//AT2G23910//ATGSTF10 GO:0009605 response to external stimulus BP 0.045985735210117 AT-BETA-AMY//PGN//ATIWS1//AT4G36500//IAA9//SHA1//ATWRKY16//LCR77//AT5G38710//ABCG6//ATRING1//AT4G30660//AT4G30650//AT4G23670//ATNPR4//AT4G19010//Prx37//ALN//FMO1//AtCRT1a//AT3G22570//AT3G23090//AtRLP33//PYD4//HRS1//COR413-TM1//ALPHA//AT1G74450//TAF2//CER8//AT1G08050//AT1G06100//RFO1//CIPK9//ACA1//ATMYC2//SEL1//PHO1;H1//AT2G16250//ATCUL3//BLH1//ATMLO6//ATDABB1//FEI2//ATOEP16-1//ATMES7//ATGSTF10//ELF4//AtWRKY35//CYP71A12 GO:0015698 inorganic anion transport BP 0.0460335929135005 AT5G12420//SULTR4;1//AT3G22570//AT3G23090//MOT2//SEL1//PHO1;H1//AtG3Pp5//AT2G39360//ATGSTF10//AtWRKY35 GO:0016143 S-glycoside metabolic process BP 0.0466512276142105 ATRING1//ATSERAT2;2//UMAMIT47//ATMYC2//FMO//FMO//UMAMIT12//AKN1//ATGSTF10 GO:0019757 glycosinolate metabolic process BP 0.0466512276142105 ATRING1//ATSERAT2;2//UMAMIT47//ATMYC2//FMO//FMO//UMAMIT12//AKN1//ATGSTF10 GO:0019760 glucosinolate metabolic process BP 0.0466512276142105 ATRING1//ATSERAT2;2//UMAMIT47//ATMYC2//FMO//FMO//UMAMIT12//AKN1//ATGSTF10 GO:0009812 flavonoid metabolic process BP 0.0475731680709015 AT5G20550//AT4G36500//UGT78D2//UF3GT//ATGSTF12//AT1G19960//ATMYC2//BLH1//ECT8//AT2G23910 GO:0009735 response to cytokinin BP 0.0487559751531341 GPK1//AT1G78990//SPY//AT1G69580//AT2G43670 GO:0071365 cellular response to auxin stimulus BP 0.0495473186152494 IAA9//AIL5//AT4G35030//AT1G78990 GO:0005982 starch metabolic process BP 0.0512552376101449 AT-BETA-AMY//SHA1//A/N-InvE//ATISA3//AT3G19000//QQS//AT1G07280//FEI2 GO:0009313 oligosaccharide catabolic process BP 0.052360957626075 BGAL7//A/N-InvE GO:0036294 cellular response to decreased oxygen le... BP 0.052360957626075 PROPEP3//FMO1 GO:0048571 long-day photoperiodism BP 0.052360957626075 APRR1//BBX7 GO:0048574 long-day photoperiodism, flowering BP 0.052360957626075 APRR1//BBX7 GO:0071453 cellular response to oxygen levels BP 0.052360957626075 PROPEP3//FMO1 GO:0009725 response to hormone BP 0.0524287386581769 GH3.3//PGN//ATIWS1//ATTBP3//ATBT4//IAA9//SHA1//AT5G59845//AIL5//LCR77//AT5G38710//ATRING1//ATNAS1//AT4G35030//AKT2//ATNPR4//GPK1//PDF1.2b//AT1G78990//AtRLP33//SPY//JAL35//ERD10//COR413-TM1//AT1G69580//AT2G43670//AT1G08050//ATMYC2//BPE//CPC//BLH1//AT2G21130//ATDABB1//ATOEP16-1//ATGSTF10 GO:0009718 anthocyanin-containing compound biosynth... BP 0.0537964743625191 UGT78D2//UF3GT//ATGSTF12//AT1G19960 GO:0007167 enzyme linked receptor protein signaling... BP 0.0539063106641414 AT5G45840//AT5G24100//RUL1//AT3G28450//AT2G16250//ATPSKR1 GO:0007169 transmembrane receptor protein tyrosine ... BP 0.0539063106641414 AT5G45840//AT5G24100//RUL1//AT3G28450//AT2G16250//ATPSKR1 GO:0010074 maintenance of meristem identity BP 0.0540506851013821 ATESD4//SHA1//MSI3 GO:1901659 glycosyl compound biosynthetic process BP 0.0553465517203881 ATRING1//ATSERAT2;2//UMAMIT47//ACA1//ATMYC2//FMO//FMO//UMAMIT12//AKN1//ATGSTF10 GO:0005976 polysaccharide metabolic process BP 0.0561303085331297 AT-BETA-AMY//ATESD4//ATCSLB05//CYP705A1//SHA1//AT5G63370//AT5G59700//A/N-InvE//ATBX3//ATISA3//AT3G19000//QQS//AT3G23090//ATCUL3B//ATCSLE1//AT1G07280//FEI2//ATXTH21//AT2G45720 GO:0006855 drug transmembrane transport BP 0.0582370435331212 AT4G22790//AT3G26590//AT1G71870//ABCG33 GO:0051094 positive regulation of developmental pro... BP 0.0582370435331212 ATESD4//AIL5//ATCUL3//CPC GO:0009838 abscission BP 0.0601063740021279 ATBT4//ATH1//PYD4 GO:0006073 cellular glucan metabolic process BP 0.061484825396118 AT-BETA-AMY//ATCSLB05//SHA1//AT5G63370//A/N-InvE//ATISA3//AT3G19000//QQS//ATCSLE1//AT1G07280//FEI2//ATXTH21 GO:0044042 glucan metabolic process BP 0.061484825396118 AT-BETA-AMY//ATCSLB05//SHA1//AT5G63370//A/N-InvE//ATISA3//AT3G19000//QQS//ATCSLE1//AT1G07280//FEI2//ATXTH21 GO:0009068 aspartate family amino acid catabolic pr... BP 0.0624360606659807 UPM1//LKR GO:0044711 single-organism biosynthetic process BP 0.06759122826046 ATESD4//ATCSLB05//CYP705A1//AT5G04120//ATIWS1//AT5G20550//UGT78D2//STR16//SHA1//AT5G63370//AT5G59700//CYP86//PSD2//UF3GT//CRF3//MRN1//UPM1//AT5G38710//AT5G38020//CYP86B1//ATGSTF12//PSY//ATRING1//AT5G05180//ATNAS1//CYP84A1//ATH1//AT4G23670//AKT2//ATISA3//Prx37//AT3G19000//AT3G22570//QQS//ATSERAT2;2//UMAMIT47//AT3G23090//ATGPAT5//JAL35//ATCUL3B//CER8//ATCSLE1//AT1G08050//GAUT6//AT1G06100//AT1G07280//AT1G19960//ACA1//ATMYC2//AT1G16040//PHO1;H1//BLH1//AtRIBA2//ECT8//GATL8//AtGolS4//ACR3//FMO//FMO//AT2G27360//FEI2//UMAMIT12//AT2G23910//AKN1//ATGSTF10//AT2G45720 GO:0009743 response to carbohydrate BP 0.0694966887836726 PGN//UGT78D2//AIL5//UF3GT//ATGSTF12//MSI3//LKR//AT4G23670//CIPK9//BLH1//ATOEP16-1//AT2G23910 GO:0009827 plant-type cell wall modification BP 0.070191562444068 AT4G26470//AG//PYD4//BPE//AGC1.7//ATEXP15 GO:0046148 pigment biosynthetic process BP 0.0704071302102458 UGT78D2//UF3GT//UPM1//ATGSTF12//PSY//ATH1//AT1G19960 GO:0005983 starch catabolic process BP 0.0731022444808686 AT-BETA-AMY//ATISA3 GO:0009960 endosperm development BP 0.0731022444808686 ATCUL3B//ATCUL3 GO:0055062 phosphate ion homeostasis BP 0.0731022444808686 GDPDL1//AtG3Pp5 GO:0055083 monovalent inorganic anion homeostasis BP 0.0731022444808686 GDPDL1//AtG3Pp5 GO:0072505 divalent inorganic anion homeostasis BP 0.0731022444808686 GDPDL1//AtG3Pp5 GO:0072506 trivalent inorganic anion homeostasis BP 0.0731022444808686 GDPDL1//AtG3Pp5 GO:0006546 glycine catabolic process BP 0.0731167470084253 AT5G23820//ATH1//ATGSTF10 GO:0044282 small molecule catabolic process BP 0.0746414548630323 STR16//UPM1//AT5G38710//AT5G23820//LKR//ATH1//ATSERAT2;2//AT1G71870//NQR//BPE//AT1G06550//ACR3//CVL1//AT2G35680//ATGSTF10 GO:0044272 sulfur compound biosynthetic process BP 0.0781048393759222 ATRING1//ATH1//AT4G23670//ATSERAT2;2//UMAMIT47//JAL35//ATMYC2//BLH1//ACR3//FMO//FMO//UMAMIT12//AKN1//ATGSTF10 GO:0006636 unsaturated fatty acid biosynthetic proc... BP 0.0800526688925053 PSY//ATH1//ATGSTF10 GO:0033559 unsaturated fatty acid metabolic process BP 0.0800526688925053 PSY//ATH1//ATGSTF10 GO:0009251 glucan catabolic process BP 0.0843008119561926 AT-BETA-AMY//ATISA3 GO:0009956 radial pattern formation BP 0.0843008119561926 AIL5//KAN GO:0010675 regulation of cellular carbohydrate meta... BP 0.0843008119561926 AT5G63370//AKN1 GO:0044247 cellular polysaccharide catabolic proces... BP 0.0843008119561926 AT-BETA-AMY//ATISA3 GO:0080022 primary root development BP 0.0843008119561926 HRS1//ATXTH21 GO:0016054 organic acid catabolic process BP 0.0850897146440298 STR16//UPM1//AT5G38710//AT5G23820//LKR//ATH1//ATSERAT2;2//AT1G71870//NQR//BPE//AT1G06550//ATGSTF10 GO:0046395 carboxylic acid catabolic process BP 0.0850897146440298 STR16//UPM1//AT5G38710//AT5G23820//LKR//ATH1//ATSERAT2;2//AT1G71870//NQR//BPE//AT1G06550//ATGSTF10 GO:0033692 cellular polysaccharide biosynthetic pro... BP 0.0864920641884872 ATESD4//ATCSLB05//CYP705A1//SHA1//AT5G63370//AT5G59700//ATISA3//AT3G19000//QQS//AT3G23090//ATCUL3B//ATCSLE1//AT1G07280//AT2G45720 GO:0009071 serine family amino acid catabolic proce... BP 0.0872623569692096 AT5G23820//ATH1//ATGSTF10 GO:0009070 serine family amino acid biosynthetic pr... BP 0.0905573302213522 AT5G04120//AT4G23670//ATSERAT2;2//JAL35//BLH1//ACR3//FMO GO:0007154 cell communication BP 0.0911625183193025 ATIWS1//AT4G36500//IAA9//SHA1//APRR1//AIL5//AT5G45840//ATWRKY16//AtPP2-A8//AT5G42140//AT5G40910//AT5G38710//AT5G24100//ATRING1//RUL1//MSI3//AT4G35030//AT4G30660//AT4G27300//AT4G26470//ATNPR4//AT4G09420//ALN//FMO1//AT3G22570//PDF1.2b//AT1G78990//AT3G23090//AT3G28450//AtRLP33//PYD4//SPY//HRS1//COR413-TM1//AT1G69580//AT1G63750//AT2G43670//AT1G08050//CIPK9//ATMYC2//SEL1//PHO1;H1//AT1G72850//AT2G16250//BLH1//AT2G35680//ATPSKR1//ELF4//AtWRKY35 GO:0051704 multi-organism process BP 0.0923841040134041 AT-BETA-AMY//PGN//ATIWS1//AT4G36500//IAA9//SHA1//ATWRKY16//LCR77//AT5G38710//ABCG6//ATRING1//ATNAS1//MSI3//AT4G30650//AT4G27300//AT4G26470//AT4G23670//ATNPR4//AG//AT4G19010//Prx37//FMO1//AtCRT1a//ATIPT7//AtRLP33//ALPHA//CER8//AT1G08050//AT1G06100//RFO1//ACA1//ATMYC2//BPE//AT2G16250//BLH1//AGC1.7//ATMLO6//ATDABB1//ATOEP16-1//ATCNGC6//AKN1//ATMES7//ATGSTF10//CYP71A12 GO:0034637 cellular carbohydrate biosynthetic proce... BP 0.092861587837345 ATESD4//ATCSLB05//CYP705A1//SHA1//AT5G63370//AT5G59700//ATISA3//AT3G19000//QQS//AT3G23090//ATCUL3B//ATCSLE1//AT1G07280//AT2G27360//AT2G45720 GO:0009625 response to insect BP 0.0945041714003313 AT4G36500//LCR77//AT1G06100//ATMYC2 GO:0019827 stem cell maintenance BP 0.0947352307833835 ATESD4//SHA1//MSI3 GO:0048864 stem cell development BP 0.0947352307833835 ATESD4//SHA1//MSI3 GO:0043255 regulation of carbohydrate biosynthetic ... BP 0.0959766318618459 AT5G63370//AKN1 GO:0043455 regulation of secondary metabolic proces... BP 0.0959766318618459 ATH1//AKN1 GO:0009611 response to wounding BP 0.0964306097197402 ATBT4//LCR77//AT5G38710//JAL35//AT1G74450//CIPK9//ATMYC2//ECT8//ATOEP16-1//ATPSKR1//ATGSTF10