GOID TERM ONTOLOGY pValue Genes GO:0000041 transition metal ion transport BP 3.24750057986456e-07 ATMHX//AT5G20550//AT5G26280//ATTIP2;3//AtPP2-A8//AT5G23830//CYP81F4//CYP706A7//AT3G26470//AT3G22570//AT3G23090//LAC7//AGL12//AT1G56145//EDA4//AT1G08670//AtGulLO5//AT2G18980 GO:0010167 response to nitrate BP 9.90232109170962e-05 AT5G12420//ATTIP2;3//AT3G48450//BP80-3;1//CYP706A7//AT3G22570//AT3G23090//LAC7//AGL12//AT1G08670//UCC2//AT2G18980//AT2G39360 GO:0030001 metal ion transport BP 0.000240980640574401 ATMHX//AT5G20550//AT5G26280//ATTIP2;3//AtPP2-A8//AT5G23830//CYP81F4//ATVAMP711//CYP706A7//AT3G26470//AT3G22570//AT3G23090//LAC7//AGL12//CIPK9//AT1G56145//EDA4//ATCHX16//AT1G08670//AtGulLO5//AT2G18980 GO:0006826 iron ion transport BP 0.000519766141693114 ATMHX//ATTIP2;3//CYP706A7//AT3G22570//AT3G23090//LAC7//AGL12//AT1G08670//AT2G18980 GO:0015706 nitrate transport BP 0.00058934736771523 AT5G12420//ATTIP2;3//BP80-3;1//CYP706A7//AT3G22570//AT3G23090//LAC7//AGL12//AT1G08670//UCC2//AT2G18980//AT2G39360 GO:0010106 cellular response to iron ion starvation BP 0.0014641692009206 ATTIP2;3//CYP706A7//AT3G22570//AT3G23090//LAC7//AGL12//AT1G08670//AT2G18980 GO:0015698 inorganic anion transport BP 0.00151308757228344 AT5G12420//ATTIP2;3//BP80-3;1//CYP706A7//AT3G22570//AT3G23090//LAC7//MOT2//AGL12//AT1G08670//UCC2//AT2G18980//AT2G39360 GO:0006811 ion transport BP 0.00220752034738221 ATMHX//AT5G12420//AT5G20550//AT5G26280//AT5G55050//ATTIP2;3//AtPP2-A8//AT5G23830//CYP81F4//ATVAMP711//AT4G22470//BP80-3;1//CYP706A7//AT3G26470//AT3G22570//AT3G23090//LAC7//LAX3//MOT2//AGL12//CIPK9//AT1G56145//EDA4//ATCHX16//AT1G65690//AT1G08670//AtGulLO5//UCC2//AT2G18980//AT2G39360 GO:0006812 cation transport BP 0.00245897661307505 ATMHX//AT5G20550//AT5G26280//AT5G55050//ATTIP2;3//AtPP2-A8//AT5G23830//CYP81F4//ATVAMP711//AT4G22470//CYP706A7//AT3G26470//AT3G22570//AT3G23090//LAC7//AGL12//CIPK9//AT1G56145//EDA4//ATCHX16//AT1G08670//AtGulLO5//AT2G18980 GO:0006820 anion transport BP 0.00335315758227794 AT5G12420//AT5G20550//AT5G55050//ATTIP2;3//AT4G22470//BP80-3;1//CYP706A7//AT3G22570//AT3G23090//LAC7//LAX3//MOT2//AGL12//AT1G65690//AT1G08670//AtGulLO5//UCC2//AT2G18980//AT2G39360 GO:0010054 trichoblast differentiation BP 0.00371231772935895 DGS1//ATCSLB05//EXT13//CYP705A12//EXT10//ATPRP3//MRH1//RALFL27//LAX3//AGL12//ATHKL1//UGT74B1//ATROPGEF4 GO:0010053 root epidermal cell differentiation BP 0.00485871723034884 DGS1//ATCSLB05//EXT13//CYP705A12//EXT10//ATPRP3//MRH1//RALFL27//LAX3//AGL12//ATHKL1//UGT74B1//ATROPGEF4 GO:0090627 plant epidermal cell differentiation BP 0.00504352699965764 DGS1//ATCSLB05//EXT13//CYP705A12//EXT10//ATPRP3//MRH1//RALFL27//LAX3//AGL12//ATHKL1//UGT74B1//ATROPGEF4 GO:0031668 cellular response to extracellular stimu... BP 0.00535870025785896 ATTIP2;3//ATPRP3//AT4G30660//CYP706A7//AT3G22570//AT3G23090//LAC7//ATPEPC1//AGL12//CIPK9//AT1G08670//AT2G18980 GO:0071496 cellular response to external stimulus BP 0.00535870025785896 ATTIP2;3//ATPRP3//AT4G30660//CYP706A7//AT3G22570//AT3G23090//LAC7//ATPEPC1//AGL12//CIPK9//AT1G08670//AT2G18980 GO:0009808 lignin metabolic process BP 0.00564330801335333 AT5G66390//AT1G66800//LAC7//LAC5//AT2G23910 GO:0010413 glucuronoxylan metabolic process BP 0.00587841077104148 ATTIP2;3//XCP1//AT3G27200//AT3G23090//AT1G70500//AT1G30750//TBL30//ATROPGEF4//AT2G45720 GO:0045492 xylan biosynthetic process BP 0.00617856512553628 ATTIP2;3//XCP1//AT3G27200//AT3G23090//AT1G70500//AT1G30750//TBL30//ATROPGEF4//AT2G45720 GO:0009267 cellular response to starvation BP 0.0063362539495928 ATTIP2;3//ATPRP3//CYP706A7//AT3G22570//AT3G23090//LAC7//ATPEPC1//AGL12//CIPK9//AT1G08670//AT2G18980 GO:0045491 xylan metabolic process BP 0.00649039945215314 ATTIP2;3//XCP1//AT3G27200//AT3G23090//AT1G70500//AT1G30750//TBL30//ATROPGEF4//AT2G45720 GO:0042594 response to starvation BP 0.00715421469478909 ATTIP2;3//ATPRP3//CYP706A7//AT3G22570//AT3G23090//LAC7//ATPEPC1//AGL12//CIPK9//AT1G08670//AT2G18980 GO:0009991 response to extracellular stimulus BP 0.00782332895872818 ATTIP2;3//ATPRP3//AT4G30660//CYP706A7//AT3G22570//AT3G23090//LAC7//ATPEPC1//AGL12//CIPK9//AT1G08670//AT2G18980 GO:0031669 cellular response to nutrient levels BP 0.00805257338894846 ATTIP2;3//ATPRP3//CYP706A7//AT3G22570//AT3G23090//LAC7//ATPEPC1//AGL12//CIPK9//AT1G08670//AT2G18980 GO:0048527 lateral root development BP 0.00834369829921409 ARF7//CYP705A12//ATPRP3//MRH1//LAX3//AGL12 GO:0048469 cell maturation BP 0.0086986560068107 DGS1//ATCSLB05//CYP705A12//ATPRP3//MRH1//RALFL27//LAX3//AGL12//ATHKL1//UGT74B1//ATROPGEF4 GO:0048764 trichoblast maturation BP 0.0086986560068107 DGS1//ATCSLB05//CYP705A12//ATPRP3//MRH1//RALFL27//LAX3//AGL12//ATHKL1//UGT74B1//ATROPGEF4 GO:0048765 root hair cell differentiation BP 0.0086986560068107 DGS1//ATCSLB05//CYP705A12//ATPRP3//MRH1//RALFL27//LAX3//AGL12//ATHKL1//UGT74B1//ATROPGEF4 GO:0010015 root morphogenesis BP 0.00882207913165577 DGS1//ATCSLB05//ARF7//EXT13//CYP705A12//EXT10//ATPRP3//MRH1//RALFL27//LAX3//AGL12//ATHKL1//UGT74B1//ATROPGEF4 GO:0010410 hemicellulose metabolic process BP 0.0090249366741468 ATTIP2;3//XCP1//AT3G27200//AT3G23090//AT1G70500//AT1G30750//TBL30//ATROPGEF4//AT2G45720 GO:0044038 cell wall macromolecule biosynthetic pro... BP 0.00987103434056135 ATTIP2;3//XCP1//AT3G27200//AT3G23090//AT1G70500//AT1G30750//TBL30//ATROPGEF4//AT2G45720 GO:0070589 cellular component macromolecule biosynt... BP 0.00987103434056135 ATTIP2;3//XCP1//AT3G27200//AT3G23090//AT1G70500//AT1G30750//TBL30//ATROPGEF4//AT2G45720 GO:0070592 cell wall polysaccharide biosynthetic pr... BP 0.00987103434056135 ATTIP2;3//XCP1//AT3G27200//AT3G23090//AT1G70500//AT1G30750//TBL30//ATROPGEF4//AT2G45720 GO:0031667 response to nutrient levels BP 0.0112813085217798 ATTIP2;3//ATPRP3//CYP706A7//AT3G22570//AT3G23090//LAC7//ATPEPC1//AGL12//CIPK9//AT1G08670//AT2G18980 GO:0007623 circadian rhythm BP 0.0115446210266404 APRR1//GATA9//AT1G07050//JMJ30//AT1G53035//AtRIBA2//ELF4 GO:0048511 rhythmic process BP 0.0115446210266404 APRR1//GATA9//AT1G07050//JMJ30//AT1G53035//AtRIBA2//ELF4 GO:0071554 cell wall organization or biogenesis BP 0.0118533073083166 DGS1//EXT13//ATTIP2;3//AT5G06630//EXT10//ATCSLD4//XCP1//MRH1//AT3G27200//AT3G23090//LAX3//AT1G70500//AT59//AT1G30750//TBL30//AGC1.7//UGT74B1//AT1G23720//ATXTH21//ATROPGEF4//AT2G45720 GO:0021700 developmental maturation BP 0.0125528295390618 DGS1//ATCSLB05//CYP705A12//ATPRP3//MRH1//RALFL27//LAX3//AGL12//ATHKL1//UGT74B1//ATROPGEF4 GO:0009736 cytokinin-activated signaling pathway BP 0.0130781665446818 AT1G78990//SPY//AT1G69580//AT2G18980 GO:0071368 cellular response to cytokinin stimulus BP 0.0130781665446818 AT1G78990//SPY//AT1G69580//AT2G18980 GO:0098656 anion transmembrane transport BP 0.0143753425033118 AT5G20550//MOT2//AtGulLO5//AT2G18980 GO:0048528 post-embryonic root development BP 0.0147942518294973 ARF7//CYP705A12//ATPRP3//MRH1//LAX3//AGL12 GO:0019748 secondary metabolic process BP 0.0150883646792749 AT5G66390//AT5G38710//ATGSTF12//CYP81F4//ATVAMP711//AT1G66800//AT3G26470//LAC7//ATGSTU28//ATGSTU22//APX1//IGMT1//LAC5//AT1G08940//UGT74B1//AT2G23910//UCC2 GO:0009698 phenylpropanoid metabolic process BP 0.0156670411319526 AT5G66390//ATVAMP711//AT1G66800//LAC7//APX1//LAC5//AT2G23910//UCC2 GO:0010583 response to cyclopentenone BP 0.0175535635881395 AT5G38710//AT3G26470//LAX3//ATGSTU28//ATGSTU22//AT1G08940 GO:0045229 external encapsulating structure organiz... BP 0.0196587458515622 DGS1//EXT13//AT5G63370//AT5G06630//EXT10//MRH1//LAX3//CCRL6//AT59//AGC1.7//UGT74B1//AT1G23720//ATXTH21//ATROPGEF4 GO:0042364 water-soluble vitamin biosynthetic proce... BP 0.0202287015448407 AtGulLO3//AtRIBA2//AtGulLO5 GO:0006767 water-soluble vitamin metabolic process BP 0.0226902833380944 AtGulLO3//AtRIBA2//AtGulLO5 GO:0080167 response to karrikin BP 0.0238399803779664 UGT78D2//COR27//AT3G52360//AT2G23910//ELF4 GO:0010383 cell wall polysaccharide metabolic proce... BP 0.0244055656221293 ATTIP2;3//XCP1//AT3G27200//AT3G23090//AT1G70500//AT1G30750//TBL30//ATROPGEF4//AT2G45720 GO:0006323 DNA packaging BP 0.0253074475415766 AT4G15890//ATTBP3//HTR11 GO:0009110 vitamin biosynthetic process BP 0.0253074475415766 AtGulLO3//AtRIBA2//AtGulLO5 GO:0055067 monovalent inorganic cation homeostasis BP 0.0257634850843903 CIPK9//ATCHX16 GO:0010359 regulation of anion channel activity BP 0.028079937692343 AT5G20550//AtGulLO5//AT2G18980 GO:1903959 regulation of anion transmembrane transp... BP 0.028079937692343 AT5G20550//AtGulLO5//AT2G18980 GO:0071705 nitrogen compound transport BP 0.0295432159983664 AT5G12420//AT5G55050//ATTIP2;3//PUT3//AT4G22470//BP80-3;1//CYP706A7//AT3G22570//AT3G23090//LAC7//LAX3//AGL12//AT1G13160//AT1G65690//AT1G08670//UCC2//AT2G18980//AT2G39360 GO:0009809 lignin biosynthetic process BP 0.0310071735327464 AT5G66390//AT1G66800//AT2G23910 GO:0022898 regulation of transmembrane transporter ... BP 0.0340882735232143 AT5G20550//AtGulLO5//AT2G18980 GO:0032409 regulation of transporter activity BP 0.0340882735232143 AT5G20550//AtGulLO5//AT2G18980 GO:0032412 regulation of ion transmembrane transpor... BP 0.0340882735232143 AT5G20550//AtGulLO5//AT2G18980 GO:0034762 regulation of transmembrane transport BP 0.0340882735232143 AT5G20550//AtGulLO5//AT2G18980 GO:0034765 regulation of ion transmembrane transpor... BP 0.0340882735232143 AT5G20550//AtGulLO5//AT2G18980 GO:0006333 chromatin assembly or disassembly BP 0.034090857862788 ATTBP3//HTR11//AT4G30660//ALDH5F1 GO:0006536 glutamate metabolic process BP 0.0365378626636748 AT5G38710//ALDH5F1 GO:0009065 glutamine family amino acid catabolic pr... BP 0.0365378626636748 AT5G38710//ALDH5F1 GO:0042343 indole glucosinolate metabolic process BP 0.0365378626636748 CYP81F4//IGMT1 GO:0042752 regulation of circadian rhythm BP 0.0373220762770788 APRR1//JMJ30//ELF4 GO:0022622 root system development BP 0.0397069459462139 DGS1//ATCSLB05//ARF7//EXT13//CYP705A12//EXT10//ATPRP3//MRH1//RALFL27//LAX3//AGL12//ATHKL1//UGT74B1//ATXTH21//ATROPGEF4 GO:0048364 root development BP 0.0397069459462139 DGS1//ATCSLB05//ARF7//EXT13//CYP705A12//EXT10//ATPRP3//MRH1//RALFL27//LAX3//AGL12//ATHKL1//UGT74B1//ATXTH21//ATROPGEF4 GO:0046271 phenylpropanoid catabolic process BP 0.0424640524977386 LAC7//LAC5 GO:0046274 lignin catabolic process BP 0.0424640524977386 LAC7//LAC5 GO:0009064 glutamine family amino acid metabolic pr... BP 0.0442418667034872 AT5G38710//NAGS2//ALDH5F1 GO:0042546 cell wall biogenesis BP 0.0451669441737455 ATTIP2;3//ATCSLD4//XCP1//AT3G27200//AT3G23090//AT1G70500//AT1G30750//TBL30//ATROPGEF4//AT2G45720 GO:0000271 polysaccharide biosynthetic process BP 0.045184224027743 ATCSLB05//AT5G63370//ATTIP2;3//ATCSLD4//XCP1//AT3G27200//AT3G23090//LAX3//AT1G70500//AT1G30750//TBL30//ATROPGEF4//AT2G45720 GO:0033692 cellular polysaccharide biosynthetic pro... BP 0.0453042362776308 ATCSLB05//AT5G63370//ATTIP2;3//ATCSLD4//XCP1//AT3G27200//AT3G23090//AT1G70500//AT1G30750//TBL30//ATROPGEF4//AT2G45720 GO:0006694 steroid biosynthetic process BP 0.0470376813719097 AT5G20550//AACT1//PUT3//AT3G22570//LAX3//AT1G30750 GO:0009084 glutamine family amino acid biosynthetic... BP 0.0487205282018097 AT5G38710//NAGS2 GO:0042335 cuticle development BP 0.0487205282018097 KCS21//ABCG32 GO:0044070 regulation of anion transport BP 0.0517524075096288 AT5G20550//AtGulLO5//AT2G18980 GO:0071555 cell wall organization BP 0.053126681248132 DGS1//EXT13//AT5G06630//EXT10//MRH1//LAX3//AT59//AGC1.7//UGT74B1//AT1G23720//ATXTH21//ATROPGEF4 GO:0071103 DNA conformation change BP 0.055723882217784 AT4G15890//ATTBP3//HTR11 GO:0048468 cell development BP 0.0570212126789683 DGS1//ATCSLB05//CYP705A12//ATPRP3//XCP1//MRH1//RALFL27//LAX3//AGL12//ATHKL1//AT1G23350//AGC1.7//UGT74B1//ATROPGEF4 GO:0010224 response to UV-B BP 0.0580508776090871 AT4G14090//UGT78D2//ATGSTF12//AT2G23910 GO:0009813 flavonoid biosynthetic process BP 0.0586879894855905 AT4G14090//AT5G20550//UGT78D2//ATGSTF12//ATVAMP711//AT1G08940//AT2G23910 GO:0009875 pollen-pistil interaction BP 0.0621423929921604 MAA3//AT3G51710 GO:0090558 plant epidermis development BP 0.0631654278940755 DGS1//ATCSLB05//EXT13//CYP705A12//EXT10//ATPRP3//MRH1//RALFL27//LAX3//AGL12//ATHKL1//UGT74B1//ATROPGEF4 GO:0009735 response to cytokinin BP 0.0676095301817357 AT1G78990//SPY//AT1G69580//AT2G18980 GO:0016129 phytosteroid biosynthetic process BP 0.0676095301817357 AT5G20550//AT3G22570//LAX3//AT1G30750 GO:0016132 brassinosteroid biosynthetic process BP 0.0676095301817357 AT5G20550//AT3G22570//LAX3//AT1G30750 GO:0009718 anthocyanin-containing compound biosynth... BP 0.0684733534578535 AT4G14090//UGT78D2//ATGSTF12 GO:0044264 cellular polysaccharide metabolic proces... BP 0.0751358912884501 ATCSLB05//AT5G63370//ATTIP2;3//ATCSLD4//XCP1//AT3G27200//AT3G23090//AT1G70500//AT1G30750//TBL30//ATXTH21//ATROPGEF4//AT2G45720 GO:0007154 cell communication BP 0.076358461702211 MAA3//ARF7//APRR1//AT5G54020//ATTIP2;3//AT5G45840//AtPP2-A8//AT5G38710//ATPRP3//AT3G51710//AT4G33560//AT4G30660//MRH1//CYP706A7//RALFL27//AT3G22570//AT1G78990//AT3G23090//AT3G26910//LAC7//SPY//SCRL6//AT1G69580//AT1G63750//ATPEPC1//AGL12//CIPK9//ATCPK30//RHA2A//AT1G08670//AT2G35680//ATPSKR1//AT2G16870//AT2G18980//AT2G02680//ELF4//ARPN GO:0005976 polysaccharide metabolic process BP 0.0767807335907465 ATCSLB05//AT5G63370//ATTIP2;3//ATCSLD4//XCP1//AT3G27200//AT3G23090//LAX3//AT1G70500//AT1G30750//TBL30//ATXTH21//ATROPGEF4//AT2G45720 GO:0008202 steroid metabolic process BP 0.0776893365117846 AT5G20550//AACT1//PUT3//AT3G22570//LAX3//AT1G30750 GO:0016128 phytosteroid metabolic process BP 0.0779307185482857 AT5G20550//AT3G22570//LAX3//AT1G30750 GO:0016131 brassinosteroid metabolic process BP 0.0779307185482857 AT5G20550//AT3G22570//LAX3//AT1G30750 GO:0034637 cellular carbohydrate biosynthetic proce... BP 0.078829082043465 ATCSLB05//AT5G63370//ATTIP2;3//ATCSLD4//XCP1//AT3G27200//AT3G23090//AT1G70500//AT1G30750//TBL30//ATROPGEF4//AT2G45720 GO:0009812 flavonoid metabolic process BP 0.0793844273970962 AT4G14090//AT5G20550//UGT78D2//ATGSTF12//ATVAMP711//AT1G08940//AT2G23910 GO:0044036 cell wall macromolecule metabolic proces... BP 0.0795006592257984 ATTIP2;3//XCP1//AT3G27200//AT3G23090//AT1G70500//AT1G30750//TBL30//ATROPGEF4//AT2G45720 GO:0080147 root hair cell development BP 0.0828125571443026 ATCSLB05//ATPRP3//LAX3//ATHKL1//UGT74B1//ATROPGEF4 GO:0052542 defense response by callose deposition BP 0.0873153960412655 AT3G26910//UGT74B1//ATMLO6