GOID	TERM	ONTOLOGY	pValue	Genes
GO:0015979	photosynthesis	BP	5.55876335318504e-10	AT2G26500//CRR42//BETA//AT5G52960//CRR1//PPD5//PMDH2//OHP//GUN4//PPD6//HCEF1//PSRP2//LTO1//FAD6//PSBQ//AT4G08280//PSBQ//TOC75-I//AT3G23700//DEG1//CP24//CLP2//GAPB//STN7//AT2G43560//NDH-O//LPA3//FTSH1//CLPP6//LQY1//AtFBA1//PSBR//AT2G44920//EDA3
GO:0019684	photosynthesis, light reaction	BP	7.55358235649822e-10	AT2G26500//CRR42//BETA//AT5G52960//CRR1//PMDH2//OHP//GUN4//HCEF1//PSRP2//LTO1//FAD6//PSBQ//AT4G08280//TOC75-I//AT3G23700//DEG1//CP24//CLP2//GAPB//STN7//AT2G43560//NDH-O//LPA3//FTSH1//CLPP6//LQY1//AtFBA1//PSBR//EDA3
GO:0010207	photosystem II assembly	BP	2.60042280278287e-08	AT2G26500//CRR42//AT5G52960//CRR1//PMDH2//OHP//GUN4//HCEF1//LTO1//PSBQ//AT4G08280//TOC75-I//CLP2//GAPB//AT2G43560//LPA3//CLPP6//LQY1//AtFBA1//PSBR
GO:0019682	glyceraldehyde-3-phosphate metabolic pro...	BP	9.80563324063324e-08	AT4G17560//AT5G14910//PPD5//PMDH2//GUN4//HCEF1//PSRP2//LTO1//IDH-I//CLB6//FAD6//AtFBA5//AT4G01310//AT3G23700//DEG1//AT3G15520//ATF1//GAPB//AT1G74070//AT2G43560//AT1G16080//FTSH1//CLPP6//LQY1//AT2G36145//AtFBA1//AT2G44920//EDA3
GO:0006098	pentose-phosphate shunt	BP	6.04743734957498e-07	AT5G14910//PMDH2//GUN4//HCEF1//LTO1//IDH-I//AtFBA5//AT3G23700//DEG1//ATF1//GAPB//AT2G43560//AT1G16080//FTSH1//LQY1//AT2G36145//AtFBA1//AT2G44920//EDA3
GO:0006739	NADP metabolic process	BP	6.04743734957498e-07	AT5G14910//PMDH2//GUN4//HCEF1//LTO1//IDH-I//AtFBA5//AT3G23700//DEG1//ATF1//GAPB//AT2G43560//AT1G16080//FTSH1//LQY1//AT2G36145//AtFBA1//AT2G44920//EDA3
GO:0051156	glucose 6-phosphate metabolic process	BP	6.04743734957498e-07	AT5G14910//PMDH2//GUN4//HCEF1//LTO1//IDH-I//AtFBA5//AT3G23700//DEG1//ATF1//GAPB//AT2G43560//AT1G16080//FTSH1//LQY1//AT2G36145//AtFBA1//AT2G44920//EDA3
GO:0006081	cellular aldehyde metabolic process	BP	7.29448492085048e-07	AT4G17560//AT5G14910//BETA//PPD5//PMDH2//GUN4//HCEF1//PSRP2//LTO1//IDH-I//CLB6//FAD6//AtFBA5//AT4G01310//AT3G23700//DEG1//AT3G15520//ATF1//GAPB//AT1G74070//AT2G43560//AT1G16080//FTSH1//AT1G21680//CLPP6//LQY1//AT2G36145//AtFBA1//AT2G44920//EDA3
GO:0046496	nicotinamide nucleotide metabolic proces...	BP	7.61941849065473e-07	AT5G14910//PMDH2//GUN4//HCEF1//LTO1//IDH-I//AtFBA5//AT3G23700//DEG1//ATF1//GAPB//AT2G43560//AT1G16080//FTSH1//LQY1//AT2G36145//AtFBA1//AT2G44920//EDA3
GO:0019362	pyridine nucleotide metabolic process	BP	8.5375687742379e-07	AT5G14910//PMDH2//GUN4//HCEF1//LTO1//IDH-I//AtFBA5//AT3G23700//DEG1//ATF1//GAPB//AT2G43560//AT1G16080//FTSH1//LQY1//AT2G36145//AtFBA1//AT2G44920//EDA3
GO:0006091	generation of precursor metabolites and ...	BP	1.09935858744255e-06	AT2G26500//CRR42//BETA//GAMMA//AT5G52960//CRR1//PMDH2//OHP//GUN4//HCEF1//PSRP2//PAD1//LTO1//IDH-I//FAD6//AtFBA5//PSBQ//AT4G08280//TOC75-I//AT3G23700//DEG1//CP24//CLP2//GAPB//STN7//AT2G43560//NDH-O//LPA3//FTSH1//CLPP6//LQY1//AtFBA1//PSBR//EDA3
GO:0072524	pyridine-containing compound metabolic p...	BP	1.33069887756824e-06	AT5G14910//PMDH2//GUN4//HCEF1//LTO1//IDH-I//AtFBA5//AT3G23700//DEG1//ATF1//GAPB//AT2G43560//AT1G16080//FTSH1//LQY1//AT2G36145//AtFBA1//AT2G44920//EDA3
GO:0009240	isopentenyl diphosphate biosynthetic pro...	BP	3.37116465644941e-06	AT4G17560//AT5G14910//PPD5//PMDH2//PSRP2//LTO1//CLB6//FAD6//AT4G01310//AT3G23700//AT3G15520//ATF1//GAPB//AtHMGR1//AT1G74070//AT2G43560//CLPP6//AtFBA1//AT2G44920//EDA3
GO:0046490	isopentenyl diphosphate metabolic proces...	BP	3.37116465644941e-06	AT4G17560//AT5G14910//PPD5//PMDH2//PSRP2//LTO1//CLB6//FAD6//AT4G01310//AT3G23700//AT3G15520//ATF1//GAPB//AtHMGR1//AT1G74070//AT2G43560//CLPP6//AtFBA1//AT2G44920//EDA3
GO:0006733	oxidoreduction coenzyme metabolic proces...	BP	4.4587243794786e-06	AT5G14910//PMDH2//GUN4//HCEF1//LTO1//IDH-I//FAD6//AtFBA5//AT3G23700//DEG1//ATF1//GAPB//AT2G43560//AT1G16080//FTSH1//LQY1//AT2G36145//AtFBA1//AT2G44920//EDA3
GO:0010304	PSII associated light-harvesting complex...	BP	4.96768272459255e-06	FOLB2//PMDH2//DEG1//GAPB//FTSH1//AtFBA1//EDA3
GO:0019288	isopentenyl diphosphate biosynthetic pro...	BP	9.62807776358226e-06	AT4G17560//AT5G14910//PPD5//PMDH2//PSRP2//LTO1//CLB6//FAD6//AT4G01310//AT3G23700//AT3G15520//ATF1//GAPB//AT1G74070//AT2G43560//CLPP6//AtFBA1//AT2G44920//EDA3
GO:0019693	ribose phosphate metabolic process	BP	1.07464242466444e-05	AT5G14910//PMDH2//GUN4//HCEF1//LTO1//IDH-I//AtFBA5//AT3G23700//DEG1//ATCRSH//ATF1//GAPB//AtHMGR1//AT2G43560//AT1G16080//FTSH1//LQY1//AT2G36145//AtFBA1//AHA5//AT1G30820//AT2G44920//EDA3
GO:0006461	protein complex assembly	BP	2.18014234258332e-05	AT2G26500//CRR42//GAMMA//GPP2//ATHTA1//AT5G52960//CRR1//H2B//PMDH2//OHP//ATL5//GUN4//HCEF1//PAD1//LTO1//HTA2//PSBQ//AT4G08280//ARPC5//TOC75-I//CLP2//GAPB//AT2G43560//AT1G06760//ATUBC2-1//HTB1//NDH-O//LPA3//CLPP6//LQY1//AtFBA1//PSBR//CRR6
GO:0034622	cellular macromolecular complex assembly	BP	2.18302684955115e-05	AT2G26500//CRR42//GAMMA//GPP2//ATHTA1//AT5G52960//CRR1//H2B//PMDH2//OHP//GUN4//HCEF1//PAD1//LTO1//HTA2//PSBQ//AT4G08280//ARPC5//TOC75-I//CLP2//GAPB//AT2G43560//AT1G06760//ATUBC2-1//HTB1//NDH-O//LPA3//CLPP6//LQY1//AtFBA1//PSBR//CRR6
GO:0070271	protein complex biogenesis	BP	2.2921751512292e-05	AT2G26500//CRR42//GAMMA//GPP2//ATHTA1//AT5G52960//CRR1//H2B//PMDH2//OHP//ATL5//GUN4//HCEF1//PAD1//LTO1//HTA2//PSBQ//AT4G08280//ARPC5//TOC75-I//CLP2//GAPB//AT2G43560//AT1G06760//ATUBC2-1//HTB1//NDH-O//LPA3//CLPP6//LQY1//AtFBA1//PSBR//CRR6
GO:0065003	macromolecular complex assembly	BP	3.3962364257736e-05	AT2G26500//CRR42//GAMMA//GPP2//ATHTA1//AT5G52960//CRR1//H2B//PMDH2//OHP//ATL5//GUN4//HCEF1//PAD1//LTO1//HTA2//PSBQ//AT4G08280//ARPC5//TOC75-I//CLP2//GAPB//AT2G43560//AT1G06760//ATUBC2-1//HTB1//NDH-O//LPA3//CLPP6//LQY1//AtFBA1//PSBR//CRR6
GO:0071822	protein complex subunit organization	BP	4.20992339025585e-05	AT2G26500//CRR42//GAMMA//GPP2//ATHTA1//AT5G52960//CRR1//H2B//PMDH2//OHP//ATL5//GUN4//HCEF1//PAD1//LTO1//HTA2//PSBQ//AT4G08280//ARPC5//TOC75-I//CLP2//GAPB//JAC1//AT2G43560//AT1G06760//ATUBC2-1//HTB1//NDH-O//LPA3//CLPP6//LQY1//AtFBA1//PSBR//CRR6
GO:0006732	coenzyme metabolic process	BP	5.22653227386392e-05	AT5G14910//FOLB2//DHNAT2//PMDH2//GUN4//HCEF1//LTO1//IDH-I//FAD6//AtFBA5//AT3G23700//DEG1//ATF1//GAPB//AtHMGR1//AT2G43560//AT1G16080//FTSH1//LQY1//AT2G36145//AtFBA1//AT2G44920//AT2G34590//EDA3
GO:0015994	chlorophyll metabolic process	BP	9.21439858284045e-05	PMDH2//GUN4//HCEF1//FAD6//AT1G16840//AT3G14067//AT3G23700//DEG1//GAPB//AT1G71480//STN7//AtFBA1//PIF1//AT2G44920//EDA3
GO:0051186	cofactor metabolic process	BP	9.93468297448367e-05	AT5G14910//FOLB2//DHNAT2//PMDH2//GUN4//HCEF1//LTO1//IDH-I//FAD6//AtFBA5//AT1G16840//AT3G14067//AT3G23700//DEG1//ATF1//GAPB//AT1G71480//AtHMGR1//STN7//AT2G43560//AT1G16080//FTSH1//LQY1//AT2G36145//AtFBA1//PIF1//AT2G44920//AT2G34590//EDA3
GO:0042254	ribosome biogenesis	BP	0.000109226069672062	AT2G26500//AT4G17560//AT5G65220//PMDH2//GUN4//HCEF1//SSR16//PSBQ//AT3G12370//AT3G23700//CLP2//GAPB//AT1G74270//AT2G43560//AT1G29070//EMB3105//CLPP6//LQY1//AT1G26880//AtFBA1
GO:0022613	ribonucleoprotein complex biogenesis	BP	0.000124524962442058	AT2G26500//AT4G17560//AT5G65220//PMDH2//GUN4//HCEF1//SSR16//PSBQ//AT3G12370//AT3G23700//CLP2//GAPB//AT1G74270//AT2G43560//AT1G29070//EMB3105//CLPP6//LQY1//AT1G26880//AtFBA1
GO:0006090	pyruvate metabolic process	BP	0.000134741776538146	AT4G17560//AT5G14910//GAMMA//PPD5//PMDH2//PSRP2//PAD1//LTO1//IDH-I//CLB6//FAD6//AtFBA5//AT4G01310//AT3G23700//AT3G15520//ATF1//GAPB//AT1G74070//AT2G43560//CLPP6//AtFBA1//AT2G44920//EDA3
GO:0008299	isoprenoid biosynthetic process	BP	0.000141966209158285	AT4G17560//AT5G14910//PPD5//PMDH2//GUN4//HCEF1//PSRP2//LTO1//CLB6//FAD6//AT4G01310//DELTA-VPE//AT3G23700//AT3G15520//ATF1//GAPB//AtHMGR1//AT1G74070//AT2G43560//AT1G16080//CLPP6//AtFBA1//PIF1//AT2G44920//EDA3
GO:0019637	organophosphate metabolic process	BP	0.000167769299190327	AT4G17560//AT5G14910//PPD5//PROPEP5//PMDH2//MEE60//GUN4//HCEF1//PSRP2//LTO1//IDH-I//CLB6//AT4G31310//FAD6//AtFBA5//AT4G01310//AT3G23700//DEG1//ATCRSH//AT3G15520//ATF1//AT3G01060//GAPB//AtHMGR1//AT1G74070//AT2G43560//AT1G16080//GCR1//FTSH1//CLPP6//LQY1//AT2G36145//AtFBA1//AHA5//AT1G79070//AT1G30820//AT2G29300//AT2G44920//ATGPAT6//EDA3
GO:0008654	phospholipid biosynthetic process	BP	0.000168732730528502	AT4G17560//AT5G14910//PPD5//PMDH2//MEE60//PSRP2//LTO1//CLB6//FAD6//AT4G01310//AT3G23700//AT3G15520//ATF1//GAPB//AtHMGR1//AT1G74070//AT2G43560//CLPP6//AtFBA1//AT1G79070//AT2G44920//ATGPAT6//EDA3
GO:0022607	cellular component assembly	BP	0.000178144126324656	AT2G26500//CRR42//GAMMA//GPP2//ATHTA1//AT5G52960//CRR1//AT5G48210//H2B//PMDH2//OHP//ATL5//GUN4//HCEF1//PAD1//LTO1//SSR16//HTA2//AT4G26370//ATML1//PSBQ//AT4G08280//ARPC5//TOC75-I//CLP2//GAPB//AT2G43560//AT1G06760//ATUBC2-1//HTB1//NDH-O//LPA3//CLPP6//LQY1//AtFBA1//PSBR//CRR6
GO:0043623	cellular protein complex assembly	BP	0.000200540631536836	AT2G26500//CRR42//GAMMA//GPP2//AT5G52960//CRR1//PMDH2//OHP//GUN4//HCEF1//PAD1//LTO1//PSBQ//AT4G08280//ARPC5//TOC75-I//CLP2//GAPB//AT2G43560//ATUBC2-1//NDH-O//LPA3//CLPP6//LQY1//AtFBA1//PSBR//CRR6
GO:0035304	regulation of protein dephosphorylation	BP	0.0002108043819679	AtTCP11//PMDH2//HCEF1//FAD6//PSBQ//CP24//CLP2//CLPP6//LQY1//AtFBA1//AtPIF4//EDA3
GO:0010114	response to red light	BP	0.00022754651526537	EFO1//OHP//HCEF1//PSBQ//ACT2//GAPB//AtFBA1//PSBR//AtPIF4//PIF1
GO:0006720	isoprenoid metabolic process	BP	0.000261725545606675	AT4G17560//AT5G14910//PPD5//PMDH2//GUN4//HCEF1//PSRP2//LTO1//CLB6//FAD6//AT4G01310//DELTA-VPE//AT3G23700//AT3G15520//ATF1//GAPB//AtHMGR1//AT1G74070//AT2G43560//AT1G16080//CLPP6//AtFBA1//PIF1//AT2G44920//EDA3
GO:0009657	plastid organization	BP	0.00030446474784939	AT2G26500//AT5G65220//PPD5//PMDH2//AT5G02710//PPD6//HCEF1//SSR16//AT4G26370//ATML1//PSBQ//TCP2//AT3G23700//EMB3123//CLP2//GAPB//JAC1//AT2G43560//AT1G16080//CLPP6//LQY1//AtFBA1//EDA3
GO:0035303	regulation of dephosphorylation	BP	0.000342478178162171	AtTCP11//PMDH2//HCEF1//FAD6//PSBQ//CP24//CLP2//CLPP6//LQY1//AtFBA1//AtPIF4//EDA3
GO:0048367	shoot system development	BP	0.000429719111673603	AtTCP11//AGO9//AT5G58530//FLA1//CRR1//HB-7//SPL2//ROXY2//AT5G12000//AGL25//PMDH2//AT5G02160//GUN4//PPD6//ATGRXCP//HTA11//SSR16//AT4G29030//AT4G26370//ABCB2//AT4G24930//ATML1//TCP2//AT4G09840//ANAC054//DOT5//AT3G15520//ATLTL1//CYP77A6//ATUBC2-1//AT1G71695//GIF2//AT1G16080//GCR1//EMB3105//ATXTH28//AtFBA1//AtGRF3//AGO5//ATBZIP27//ATGPAT6
GO:0009117	nucleotide metabolic process	BP	0.000430193616889404	AT5G14910//PMDH2//GUN4//HCEF1//LTO1//IDH-I//FAD6//AtFBA5//AT3G23700//DEG1//ATCRSH//ATF1//GAPB//AtHMGR1//AT2G43560//AT1G16080//FTSH1//LQY1//AT2G36145//AtFBA1//AHA5//AT1G30820//AT2G44920//EDA3
GO:0006753	nucleoside phosphate metabolic process	BP	0.000451285925169178	AT5G14910//PMDH2//GUN4//HCEF1//LTO1//IDH-I//FAD6//AtFBA5//AT3G23700//DEG1//ATCRSH//ATF1//GAPB//AtHMGR1//AT2G43560//AT1G16080//FTSH1//LQY1//AT2G36145//AtFBA1//AHA5//AT1G30820//AT2G44920//EDA3
GO:0006457	protein folding	BP	0.000482117937574299	ATPUB49//PFD5//AT5G16650//AT5G05750//ROC1//AT4G26555//AT3G15520//AT3G08910//AT1G67620//AT1G74070//AT2G43560//AT1G59725//AT1G75560//ATCYP5
GO:0006778	porphyrin-containing compound metabolic ...	BP	0.000526293447567621	PMDH2//GUN4//HCEF1//FAD6//AT1G16840//AT3G14067//AT3G23700//DEG1//GAPB//AT1G71480//STN7//AtFBA1//PIF1//AT2G44920//EDA3
GO:0033013	tetrapyrrole metabolic process	BP	0.000526293447567621	PMDH2//GUN4//HCEF1//FAD6//AT1G16840//AT3G14067//AT3G23700//DEG1//GAPB//AT1G71480//STN7//AtFBA1//PIF1//AT2G44920//EDA3
GO:0006644	phospholipid metabolic process	BP	0.000528390460911176	AT4G17560//AT5G14910//PPD5//PMDH2//MEE60//PSRP2//LTO1//CLB6//FAD6//AT4G01310//AT3G23700//AT3G15520//ATF1//GAPB//AtHMGR1//AT1G74070//AT2G43560//CLPP6//AtFBA1//AT1G79070//AT2G44920//ATGPAT6//EDA3
GO:0009073	aromatic amino acid family biosynthetic ...	BP	0.000585499510959409	AT5G52960//AT3G61720//GUN4//AT4G26370//GCR1//LPA3//CLPP6//AtFBA1//CRR6
GO:0043085	positive regulation of catalytic activit...	BP	0.000585499510959409	ATF2//PMDH2//AT5G02160//GUN4//HCEF1//ATF1//GCR1//AT2G36145//AT2G44920
GO:0044093	positive regulation of molecular functio...	BP	0.000585499510959409	ATF2//PMDH2//AT5G02160//GUN4//HCEF1//ATF1//GCR1//AT2G36145//AT2G44920
GO:0090407	organophosphate biosynthetic process	BP	0.000930514576474657	AT4G17560//AT5G14910//PPD5//PROPEP5//PMDH2//MEE60//PSRP2//LTO1//CLB6//AT4G31310//FAD6//AT4G01310//AT3G23700//AT3G15520//ATF1//AT3G01060//GAPB//AtHMGR1//AT1G74070//AT2G43560//GCR1//CLPP6//AtFBA1//AHA5//AT1G79070//AT1G30820//AT2G29300//AT2G44920//ATGPAT6//EDA3
GO:0044085	cellular component biogenesis	BP	0.000970475973679634	AT2G26500//AT4G17560//AT5G08450//CRR42//AT5G65220//GAMMA//GPP2//ATHTA1//AT5G52960//CRR1//AT5G48210//H2B//PMDH2//OHP//ATL5//GUN4//HCEF1//PAD1//LTO1//SSR16//HTA2//AT4G26370//ATML1//PSBQ//AT4G08280//ARPC5//AT3G12370//TOC75-I//AT3G23700//CLP2//GAPB//AT1G74270//AT2G43560//AT1G06760//AT1G29070//ATUBC2-1//ANAC033//HTB1//NDH-O//EMB3105//LPA3//CLPP6//LQY1//AT1G26880//AtFBA1//PSBR//ATERF38//CRR6
GO:0009637	response to blue light	BP	0.00102305764836285	OHP//HCEF1//ROC1//PSBQ//AT3G16850//GAPB//JAC1//GCR1//AtFBA1//PSBR
GO:0019220	regulation of phosphate metabolic proces...	BP	0.00106029307315406	AtTCP11//PMDH2//HCEF1//ROC1//FAD6//PSBQ//CP24//CLP2//GCR1//CLPP6//LQY1//AtFBA1//AtPIF4//EDA3
GO:0051174	regulation of phosphorus metabolic proce...	BP	0.00106029307315406	AtTCP11//PMDH2//HCEF1//ROC1//FAD6//PSBQ//CP24//CLP2//GCR1//CLPP6//LQY1//AtFBA1//AtPIF4//EDA3
GO:0055086	nucleobase-containing small molecule met...	BP	0.00106480218672832	AT5G14910//PMDH2//GUN4//HCEF1//LTO1//IDH-I//FAD6//AtFBA5//AT3G23700//DEG1//ATCRSH//ATF1//GAPB//AtHMGR1//AT2G43560//AT1G16080//FTSH1//LQY1//AT2G36145//AtFBA1//AHA5//AT1G30820//AT2G44920//EDA3
GO:0048827	phyllome development	BP	0.00115179137804573	AtTCP11//AGO9//AT5G58530//CRR1//SPL2//ROXY2//AT5G12000//AGL25//PMDH2//AT5G02160//GUN4//PPD6//ATGRXCP//SSR16//ABCB2//ATML1//TCP2//AT4G09840//ANAC054//DOT5//ATUBC2-1//AT1G71695//GIF2//AT1G16080//EMB3105//ATXTH28//AtFBA1//AtGRF3//AGO5
GO:0051649	establishment of localization in cell	BP	0.00134992233260339	ATNDT1//AT5G28750//AtTCP11//AT5G15640//AT5G14910//BETA//ATXYLT//AT5G55450//ATEXO70A2//PPD5//PMDH2//HCEF1//ATCHX20//PSRP2//AT3G47380//ATGB2//AT4G26550//ATRMA1//AT1G16840//AT3G23700//ACT2//AT3G10780//CLP2//GAPB//JAC1//AT1G71480//AT1G78180//AT1G48160//CLPP6//emb1473//AtFBA1//ATTOC33//NTF2A//AP19//ABCI18//AtPIF4//AT2G20930//AT2G46490//ATPR1//ATCYP5//EDA3
GO:0015995	chlorophyll biosynthetic process	BP	0.00147424240653918	PMDH2//GUN4//HCEF1//FAD6//AT3G23700//GAPB//AtFBA1//PIF1//AT2G44920//EDA3
GO:0009902	chloroplast relocation	BP	0.00153573081306731	PMDH2//HCEF1//AT3G23700//CLP2//GAPB//JAC1//CLPP6//AtFBA1//EDA3
GO:0019750	chloroplast localization	BP	0.00153573081306731	PMDH2//HCEF1//AT3G23700//CLP2//GAPB//JAC1//CLPP6//AtFBA1//EDA3
GO:0051644	plastid localization	BP	0.00153573081306731	PMDH2//HCEF1//AT3G23700//CLP2//GAPB//JAC1//CLPP6//AtFBA1//EDA3
GO:0051667	establishment of plastid localization	BP	0.00153573081306731	PMDH2//HCEF1//AT3G23700//CLP2//GAPB//JAC1//CLPP6//AtFBA1//EDA3
GO:0051656	establishment of organelle localization	BP	0.00186074099805465	PMDH2//HCEF1//AT3G23700//CLP2//GAPB//JAC1//CLPP6//AtFBA1//EDA3
GO:0031399	regulation of protein modification proce...	BP	0.00225060217395107	AtTCP11//PMDH2//HCEF1//ROC1//FAD6//PSBQ//CP24//CLP2//CLPP6//LQY1//AtFBA1//AtPIF4//EDA3
GO:0042440	pigment metabolic process	BP	0.00250821876396073	PMDH2//GUN4//HCEF1//FAD6//AtFBA5//AT1G16840//AT3G14067//AT3G23700//DEG1//GAPB//AT1G71480//STN7//AT1G16080//AtFBA1//PIF1//AT2G44920//AtWRKY12//EDA3
GO:0009072	aromatic amino acid family metabolic pro...	BP	0.00255204384219463	AT5G52960//PMDH2//AT3G61720//GUN4//FAD6//AT4G28030//AT4G26370//AT1G80360//GCR1//LPA3//CLPP6//AtFBA1//CRR6
GO:0009668	plastid membrane organization	BP	0.00255204384219463	PPD5//AT5G02710//PPD6//HCEF1//SSR16//ATML1//AT3G23700//CLP2//AT2G43560//AT1G16080//CLPP6//AtFBA1//EDA3
GO:0010027	thylakoid membrane organization	BP	0.00255204384219463	PPD5//AT5G02710//PPD6//HCEF1//SSR16//ATML1//AT3G23700//CLP2//AT2G43560//AT1G16080//CLPP6//AtFBA1//EDA3
GO:0006470	protein dephosphorylation	BP	0.00283995439806878	AtTCP11//PMDH2//HCEF1//FAD6//PSBQ//CP24//CLP2//CLPP6//LQY1//AtFBA1//AtPIF4//EDA3
GO:0044802	single-organism membrane organization	BP	0.00313425673034732	AtTCP11//BETA//ATXYLT//AT5G55450//PPD5//PMDH2//AT5G02710//PPD6//HCEF1//AT3G47380//SSR16//ATML1//AT3G23700//CLP2//AT2G43560//AT1G48160//AT1G16080//CLPP6//AtFBA1//AtPIF4//ATPR1//EDA3
GO:0019725	cellular homeostasis	BP	0.00338660474131141	AT5G58530//ATSDAT//SLAH3//ATF2//ROXY2//AT5G02160//ATGRXCP//HCEF1//ATCHX20//ATHXK1//PSBQ//ATF1//MLP43//AtPIF4
GO:0010218	response to far red light	BP	0.0033970757621875	EFO1//OHP//HCEF1//PSBQ//ACT2//GAPB//AtFBA1//PSBR
GO:0055082	cellular chemical homeostasis	BP	0.00386468167134665	ATSDAT//SLAH3//AT5G02160//ATGRXCP//HCEF1//ATCHX20//ATHXK1//PSBQ//MLP43//AtPIF4
GO:0043933	macromolecular complex subunit organizat...	BP	0.00401733670329338	AT2G26500//CRR42//GAMMA//GPP2//ATHTA1//AT5G52960//CRR1//H2B//PMDH2//OHP//ATL5//GUN4//HTA11//HCEF1//PAD1//LTO1//HTA2//AT4G26555//PSBQ//AT4G08280//ARPC5//TOC75-I//CLP2//GAPB//JAC1//AT2G43560//AT1G06760//ATUBC2-1//HTB1//NDH-O//LPA3//CLPP6//LQY1//AtFBA1//PSBR//CRR6
GO:0051641	cellular localization	BP	0.00416871001220274	ATNDT1//AT5G28750//AtTCP11//AT5G15640//AT5G14910//BETA//ATXYLT//AT5G55450//ATEXO70A2//PPD5//PMDH2//HCEF1//ATCHX20//PSRP2//AT3G47380//ATGB2//AT4G26550//ATRMA1//AT1G16840//AT3G23700//ACT2//AT3G10780//CLP2//GAPB//JAC1//AT1G71480//AT1G78180//AT1G48160//CLPP6//emb1473//AtFBA1//ATTOC33//NTF2A//AP19//ABCI18//AtPIF4//AT2G20930//AT2G46490//ATPR1//ATCYP5//EDA3
GO:0061024	membrane organization	BP	0.00457662866205267	AtTCP11//BETA//ATXYLT//AT5G55450//PPD5//PMDH2//AT5G02710//PPD6//HCEF1//AT3G47380//SSR16//ATML1//AT3G23700//CLP2//AT2G43560//AT1G48160//AT1G16080//CLPP6//AtFBA1//AtPIF4//ATPR1//EDA3
GO:1901564	organonitrogen compound metabolic proces...	BP	0.00515051200746066	AT5G14910//ASN2//FOLB2//AT5G52960//CRR1//SLAH3//AT5G09770//PMDH2//AT3G61720//GUN4//HCEF1//ROC1//LTO1//IDH-I//FAD6//AT4G28030//AtFBA5//AT4G26370//AT4G01310//AT1G16840//AT3G14067//AT3G23700//DEG1//ATCRSH//ATF1//CP24//GAPB//AT1G71480//AtHMGR1//STN7//AT1G80360//AT2G43560//AT1G16080//GCR1//LPA3//FTSH1//CLPP6//LQY1//MCCA//AT2G36145//AtFBA1//AHA5//PSBR//AT1G30820//PIF1//CRR6//AT2G44920//EDA3
GO:0009965	leaf morphogenesis	BP	0.00527900286069592	AtTCP11//CRR1//PMDH2//AT5G02160//GUN4//PPD6//TCP2//DOT5//ATUBC2-1//AT1G16080//AtFBA1
GO:0044281	small molecule metabolic process	BP	0.00626125990302674	AT4G17560//ATECI3//AT5G14910//BETA//ASN2//GAMMA//FOLB2//AT5G55450//AT5G52960//CRR1//DHNAT2//ATF2//PPD5//PROPEP5//AT5G09770//PMDH2//AT3G61720//GUN4//ATGRXCP//HCEF1//PSRP2//PAD1//AT3G48460//AT3G47380//ROC1//LTO1//IDH-I//CLB6//AT4G31310//FAD6//AT4G28030//AtFBA5//AT4G26370//AT4G24930//AT4G13050//AT4G01310//CER60//DELTA-VPE//AT3G23700//DEG1//ATCRSH//AT3G15520//ATF1//AT3G01060//CP24//GAPB//AtHMGR1//AT1G80360//AT1G74070//AT2G43560//ATUBC2-1//AT1G48430//AT1G27690//AT1G16080//GCR1//LPA3//EDA17//FTSH1//AT1G21680//CLPP6//LQY1//MCCA//AT2G36145//AtFBA1//AHA5//PSBR//AT1G30820//PIF1//AT2G29300//ATPR1//CRR6//AtSLD2//AT2G44920//AT2G34590//EDA3
GO:0071478	cellular response to radiation	BP	0.00628007079855515	CSD3//ROC1//JAC1//GCR1//AtPIF4//PIF1
GO:0071482	cellular response to light stimulus	BP	0.00628007079855515	CSD3//ROC1//JAC1//GCR1//AtPIF4//PIF1
GO:0032268	regulation of cellular protein metabolic...	BP	0.006332396448585	AtTCP11//PMDH2//HCEF1//ROC1//FAD6//PSBQ//TCP2//CP24//CLP2//CLPP6//LQY1//AtFBA1//AtPIF4//EDA3
GO:0006779	porphyrin-containing compound biosynthet...	BP	0.0067018038539861	PMDH2//GUN4//HCEF1//FAD6//AT3G23700//GAPB//AtFBA1//PIF1//AT2G44920//EDA3
GO:0046173	polyol biosynthetic process	BP	0.00683573331371364	PROPEP5//AT3G48460//AT4G31310//AT3G01060//AT1G27690//GCR1//AT2G29300
GO:0033014	tetrapyrrole biosynthetic process	BP	0.00714737808034303	PMDH2//GUN4//HCEF1//FAD6//AT3G23700//GAPB//AtFBA1//PIF1//AT2G44920//EDA3
GO:0051246	regulation of protein metabolic process	BP	0.00732227859569368	AtTCP11//PMDH2//HCEF1//ROC1//FAD6//PSBQ//TCP2//CP24//CLP2//CLPP6//LQY1//AtFBA1//AtPIF4//EDA3
GO:0016311	dephosphorylation	BP	0.00736689517620722	AtTCP11//PMDH2//HCEF1//FAD6//PSBQ//CP24//CLP2//CLPP6//LQY1//AtFBA1//AtPIF4//EDA3
GO:0048653	anther development	BP	0.00777761225067625	AT5G58530//SPL2//ROXY2//ATGRXCP//AT1G71695//EMB3105
GO:0009644	response to high light intensity	BP	0.00792022569157675	CSD3//OHP//FAD6//PSBQ//ACT2//GAPB//AT1G67620//AT1G75560//PSBR
GO:1901135	carbohydrate derivative metabolic proces...	BP	0.00832872589182983	AT4G17560//AT5G08450//AT5G14910//ATXYLT//PPD5//PMDH2//GUN4//ATGRXCP//HCEF1//PSRP2//LTO1//IDH-I//CLB6//FAD6//AtFBA5//AT4G24930//AT4G01310//AT3G23700//DEG1//ATCRSH//AT3G15520//ATF1//GAPB//AtHMGR1//AT1G74070//AT2G43560//AT1G16080//FTSH1//CLPP6//LQY1//AT2G36145//AtFBA1//AHA5//AT1G30820//AT2G44920//EDA3
GO:0006873	cellular ion homeostasis	BP	0.0084788518893863	ATSDAT//SLAH3//AT5G02160//ATGRXCP//HCEF1//ATCHX20//PSBQ//MLP43//AtPIF4
GO:0042793	transcription from plastid promoter	BP	0.00861568676159559	AT5G65220//AT4G26370//AT3G23700//CLP2//CLPP6//EDA3
GO:0071483	cellular response to blue light	BP	0.00891235794713343	ROC1//JAC1//GCR1
GO:0009773	photosynthetic electron transport in pho...	BP	0.0092327659496259	CRR1//HCEF1//PSRP2//AT3G23700//GAPB
GO:0006796	phosphate-containing compound metabolic ...	BP	0.00947788376848531	AT4G17560//AtTCP11//AT5G14910//BETA//AT5G55450//AT5G12000//PPD5//PROPEP5//PMDH2//MEE60//GUN4//HCEF1//PSRP2//AT3G51990//AT3G47380//ROC1//LTO1//IDH-I//CLB6//AT4G31310//FAD6//AtFBA5//CK1//PSBQ//AT4G01310//ATMKK8//AT3G23700//DEG1//AT3G16850//ATCRSH//AT3G15520//ATF1//LYK2//AT3G01060//CP24//CLP2//GAPB//AtHMGR1//STN7//AT1G74070//AT2G43560//HT1//AT1G16080//NDH-O//GCR1//FTSH1//CLPP6//LQY1//AT2G36145//CPK24//AtFBA1//AHA5//AT1G79070//AT1G30820//AtPIF4//AT2G29300//ATPR1//ATMPK12//AT2G44920//ATGPAT6//EDA3
GO:0043436	oxoacid metabolic process	BP	0.0100273228364993	AT4G17560//ATECI3//AT5G14910//BETA//ASN2//GAMMA//FOLB2//AT5G55450//AT5G52960//CRR1//PPD5//AT5G09770//PMDH2//AT3G61720//GUN4//ATGRXCP//PSRP2//PAD1//AT3G47380//ROC1//LTO1//IDH-I//CLB6//FAD6//AT4G28030//AtFBA5//AT4G26370//AT4G24930//AT4G13050//AT4G01310//CER60//DELTA-VPE//AT3G23700//DEG1//AT3G15520//ATF1//CP24//GAPB//AT1G80360//AT1G74070//AT2G43560//ATUBC2-1//GCR1//LPA3//EDA17//AT1G21680//CLPP6//MCCA//AtFBA1//PSBR//PIF1//ATPR1//CRR6//AtSLD2//AT2G44920//EDA3
GO:0051640	organelle localization	BP	0.0103351233041213	PMDH2//HCEF1//AT3G23700//CLP2//GAPB//JAC1//CLPP6//AtFBA1//EDA3
GO:0006082	organic acid metabolic process	BP	0.010387278957101	AT4G17560//ATECI3//AT5G14910//BETA//ASN2//GAMMA//FOLB2//AT5G55450//AT5G52960//CRR1//PPD5//AT5G09770//PMDH2//AT3G61720//GUN4//ATGRXCP//PSRP2//PAD1//AT3G47380//ROC1//LTO1//IDH-I//CLB6//FAD6//AT4G28030//AtFBA5//AT4G26370//AT4G24930//AT4G13050//AT4G01310//CER60//DELTA-VPE//AT3G23700//DEG1//AT3G15520//ATF1//CP24//GAPB//AT1G80360//AT1G74070//AT2G43560//ATUBC2-1//GCR1//LPA3//EDA17//AT1G21680//CLPP6//MCCA//AtFBA1//PSBR//PIF1//ATPR1//CRR6//AtSLD2//AT2G44920//EDA3
GO:0045036	protein targeting to chloroplast	BP	0.0104006718343274	AT5G14910//PPD5//PSRP2//emb1473//ATTOC33
GO:0072596	establishment of protein localization to...	BP	0.0104006718343274	AT5G14910//PPD5//PSRP2//emb1473//ATTOC33