4.0:Analysis result:Information of module
ein5-1 ski2-3

    Top 100 most enriched GO terms
GOID/TermOntologyp-valueGenes
GO:0015979
photosynthesis		BP1.207e-182PSAD-2 FZL PSB27 POR ATHM1 atTIC20 emb2394 OE23 PSAO ALB-1V CRB CLPP6 AT1G12000 GAPA-2 PnsL2 AT1G14270 AT1G14345 CP24 NDF1 HCF173 ACR11 LHCA2*1 AT1G19740 ATLFNR2 AB180 AB140 PSAK PSAF CXC750 PRK AT1G32470 RPL21C GAPB AtcFBP CP22 Lhca5 AT1G52220 PSAH-2 AT1G54500 AtTLP18.3 PSAG ATFD2 LHCA3 ATSCO1 AT1G63610 RPOD1 AT1G65230 RBCS1A PSBY ATHPR1 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PDE343 emb2184 AT1G75460 LQY1 TAPX PSBR AT2G04039 PSBX OTP51 PSAE-2 PSB29 PDTPI AtFBA1 AT2G21530 SEP2 AT2G26500 PSBW FTSH2 ARASP DAL EDA3 GDCH AT2G35410 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 PnsL1 RCA LHCB4.3 ATFER4 AT2G42220 AT2G43030 AT2G43560 AT2G44920 CPFTSY PSAP CP12 DEG2 PnsL3 ATBCA1 EMB3119 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G13120 ESM1 ADS3 PSAH-1 NDF4 AtTic62 PSBTN AT3G23700 HCF101 PLSP1 AtCHUP1 GAPA CCB1 PTAC16 AT3G47070 AT3G47650 AT3G48420 OEC33 PSRP2 HCEF1 LHCA1 PPL1 SBPASE ACSF LHCA2 AT3G61870 CYP20-3 CP12 CSP41A EMB3126 Conceptual translation of this open reading frame gave the sequence of a 229-residue hypothetical protein that contains the same sequence as the mature A. thaliana chloroplast luminal 19-kDa protein linked to a putative signal sequence. TROL AGY1 AT4G02530 PSAD-1 PETC ATPC1 PSBQ APX4 ATPD LHCB5 PSAL AT4G16980 LIL3:1 CH-42 PSBQ PGR5-LIKE ACP4 CHLM PORB NARA5 PSB28 PSAE-1 FAD6 PDE334 SEP1 HCF244 LTO1 SHM1 AtFBA2 LHCB4.1 STN8 OHP FD-GOGAT 2-Cys AT5G08050 HEMC FTRA2 AtPPa6 PMDH2 PPD5 EMB3136 ABAR EMB3137 BETA ENH1 ATGER3 CRR42 HCF136 ARRPS1 AT5G35170 AMOS1 G6PD1 ATPRFB RBCS3B AT5G38520 APE1 CRR7 FTSH5 AT5G44520 AtCEST CLPP4 CHL APE2 LIL3:2 ATFRO7 AT5G51110 AT5G52780 AT5G52960 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. LUT2 NdhN AT5G58330 emb2746 PSAN ATLFNR1 MSP-1 PSBA MATK RPS16 RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBM PSBD PSBC YCF9 PSAB PSAA YCF3 RPS4 NDHJ PSBG NDHC ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBJ PSBL PSBE ORF31 PETG PSAJ RPL33 RPS18 RPL20 CLPP1 PSBB PSBT PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 NDHF RPL32 YCF5 NDHD PSAC NDHE NDHG NDHI NDHA NDHH RPS15
GO:0006091
generation of precursor metabolites and ...		BP2.334e-144emb2386 PSAD-2 FZL PSB27 POR ATHM1 atTIC20 emb2394 ATCTL1 OE23 PSAO CRB ATFD1 CLPP6 AT1G12000 AT1G12230 GAPA-2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 AT1G14270 AT1G14345 CP24 NDF1 HCF173 ACR11 ATARCA LHCA2*1 AT1G19740 ATLFNR2 APT1 AB180 AB140 AT1G30580 CXC750 PRK AT1G32470 FdC2 RPL21C GAPB CP22 Lhca5 AT1G52220 PSAH-2 mMDH1 AT1G54500 AtTLP18.3 PSAG AT1G56190 ATFD2 LHCA3 ACO2 ATSCO1 AT1G63610 PSBY ATHPR1 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NRP1 PDE343 emb2184 AT1G75460 LQY1 PSBR PGK OTP51 PSAE-2 PSB29 AtFBA1 AT2G21530 SEP2 AT2G26500 PSBW FTSH2 ARASP DAL EDA3 GDCH GAMMA-TIP Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 PnsL1 RCA LHCB4.3 AT2G42220 AT2G43030 AT2G43090 AT2G43560 CPFTSY ATPMM ATHH2 PSAP ATPDI11 DEG2 PnsL3 ATBCA1 EMB3119 AT3G10020 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 ADS3 PSAH-1 NDF4 AtTic62 PSBTN PKP-ALPHA AT3G23700 PLSP1 AtCHUP1 GAMMA-TIP2 GAPA CCB1 PTAC16 AT3G47650 AT3G48420 OEC33 PSRP2 AtPIP2;1 HCEF1 LHCA1 PPL1 SBPASE ACSF AT3G58610 AT3G60750 LHCA2 AT3G61870 CYP20-3 CSP41A TROL AT4G02530 PSAD-1 PETC ATPC1 APX4 ATPD LHCB5 PSAL FdC1 AT4G16980 LIL3:1 PSBQ PGR5-LIKE AtHsp90-7 PGI ACP4 AtFBA5 PORB PSB28 PSAE-1 PFK1 FAD6 PDE334 SEP1 HCF244 LTO1 SHM1 AtFBA2 LHCB4.1 STN8 OHP AT-HSC70-1 FD-GOGAT 2-Cys AT5G08050 HEMC FTRA2 AtPPa6 PMDH2 TUB6 EMB3136 ABAR EMB3137 BETA ENH1 ATCBR ATGER3 ATCPN21 CRR42 HCF136 ARRPS1 AT5G35170 AMOS1 ATGSL1 ATPRFB AT5G38520 APE1 CRR7 OLI7 FTSH5 AT5G42740 AT5G44520 AtCEST CLPP4 CHL APE2 LIL3:2 ATFRO7 AT5G51110 AT5G52780 AT5G52960 LUT2 NdhN AT5G58330 emb2746 PSAN ATLFNR1 MSP-1 PSBA MATK RPS16 RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBM PSBD PSBC YCF9 RPS14 PSAB PSAA YCF3 RPS4 NDHJ PSBG NDHC ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBE ORF31 PETG PSAJ RPL33 RPS18 RPL20 CLPP1 PSBB PSBT PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 NDHF RPL32 YCF5 NDHD PSAC NDHE NDHG NDHI NDHA NDHH RPS15
GO:0019684
photosynthesis, light reaction		BP5.355e-141PSAD-2 FZL PSB27 POR ATHM1 atTIC20 emb2394 OE23 PSAO CRB CLPP6 GAPA-2 PnsL2 AT1G14270 AT1G14345 CP24 NDF1 HCF173 ACR11 LHCA2*1 AT1G19740 ATLFNR2 AB180 AB140 CXC750 PRK AT1G32470 RPL21C GAPB CP22 Lhca5 AT1G52220 PSAH-2 AT1G54500 AtTLP18.3 PSAG ATFD2 LHCA3 ATSCO1 AT1G63610 PSBY ATHPR1 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PDE343 emb2184 AT1G75460 LQY1 PSBR OTP51 PSAE-2 PSB29 AtFBA1 AT2G21530 SEP2 AT2G26500 PSBW FTSH2 ARASP DAL EDA3 GDCH Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 PnsL1 RCA LHCB4.3 AT2G42220 AT2G43030 AT2G43560 CPFTSY PSAP DEG2 PnsL3 ATBCA1 EMB3119 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 ADS3 PSAH-1 NDF4 AtTic62 PSBTN AT3G23700 PLSP1 AtCHUP1 GAPA CCB1 PTAC16 AT3G47650 AT3G48420 OEC33 PSRP2 HCEF1 LHCA1 PPL1 SBPASE ACSF LHCA2 AT3G61870 CYP20-3 CSP41A TROL AT4G02530 PSAD-1 PETC ATPC1 APX4 ATPD LHCB5 PSAL AT4G16980 LIL3:1 PSBQ PGR5-LIKE ACP4 PORB PSB28 PSAE-1 FAD6 PDE334 SEP1 HCF244 LTO1 SHM1 AtFBA2 LHCB4.1 STN8 OHP FD-GOGAT 2-Cys AT5G08050 HEMC FTRA2 AtPPa6 PMDH2 EMB3136 ABAR EMB3137 BETA ENH1 ATGER3 CRR42 HCF136 ARRPS1 AMOS1 ATPRFB AT5G38520 APE1 CRR7 FTSH5 AtCEST CLPP4 CHL APE2 LIL3:2 ATFRO7 AT5G51110 AT5G52780 AT5G52960 LUT2 NdhN AT5G58330 PSAN ATLFNR1 MSP-1 PSBA MATK PSBK PSBI ATPA ATPF ATPH PSBM PSBD PSBC YCF9 PSAB PSAA YCF3 NDHJ PSBG NDHC ATPE ACCD PSAI YCF4 YCF10 PETA PSBL PSBE ORF31 PETG PSAJ RPS18 PSBB PSBT PSBH PETB PETD RPL16 YCF5 NDHD PSAC NDHE NDHG NDHI NDHA NDHH
GO:0009987
cellular process		BP2.883e-135AT1G01080 AT1G01100 AT1G01320 CYP86A4 ATGPAT4 ATKEA1 AT1G02150 CER1 IMPA-6 ATCSLD5 emb2386 PSAD-2 FZL ATCPO-I PSB27 POR ATHM1 AtTPX2 AtSDD1 RPS15 AT1G04420 PDLP2 AT1G04800 TOR2 atTIC20 ATPDI10 emb2394 ATCTL1 ADS1 ORA59 RHON1 OE23 AT1G06760 ATTIC110 EMB2784 AT1G07440 RPS15A HTB1 AT1G07820 AT1G08360 PSAO ALB-1V ABC1 AVDE1 ACHT4 CJD1 AT1G09130 AtCRT1b AT1G09310 CRB AT1G09590 AT1G09690 ATATP-PRT2 ARR4 Z-ISO ATFD1 MORF9 CLPP6 AT1G11860 AT1G12000 AT1G12230 AT1G12460 ATCCS AT1G12800 ICE2 GAPA-2 MAP1B AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 AT1G14270 RPL10 AT1G14345 ATWHY1 ATMAP70-4 CPN10 ATDEF1 CENP-C AtAVP1 CP24 NDF1 HCF173 ACR11 AtHBP1 AT1G17200 FUG1 ATARCA ATLP-1 AT1G18360 ATNACK1 AT1G18540 AT1G18660 LHCA2*1 BES1 ATCLH1 AT1G19740 APS2 TUB5 ATLFNR2 ATEXP11 DRT112 AT1G21350 AT1G21680 AT1G21740 LYM1 ATCOX6B2 AT1G22630 FB ATPIN7 RPL27A AOAT1 ATCAF2 AOR MLP423 BBX15 AT-EXP10 AT1G27120 APT1 AT1G28530 AT1G29070 ATPEX7 RWA4 AB180 AB140 PSAK AT1G30580 AT1G30690 ATIMD3 PSAF CXC750 ATROPGEF14 ACBP PRK AtLrgB AT1G32160 AT1G32470 FdC2 PRPL11 PGY2 ATPS1 EMB3003 ARF20 RPL21C expressed protein localized to the inner membrane of the chloroplast. GAPB ARP1 Aty2 AtcFBP AT1G44000 CYCA1;1 CP22 AtBGAL5 Lhca5 mtLPD1 EMB3105 RKL1 GATB RACK1B AT1G49010 AT1G49380 AT1G49750 TUA2 ATHX UBC20 AUG4 GDC1 HTA10 AT1G51110 AT1G52220 PSAH-2 ABA2 AT1G52510 mMDH1 ATMUM4 AtFAP3 AT1G54410 AIN1 AT1G54500 ACP2 G-H2AX AtTLP18.3 AT1G54820 AT1G55140 AGP21 AT1G55360 CPN60B PSAG AT1G56050 AT1G56190 ATSAR1 AtCRT1a SVB AT1G57770 AT1G60000 AT1G60590 ACLA-2 AT1G60890 ATFD2 LHCA3 ACO2 ATSCO1 AT1G62780 AT1G63610 AT1G64510 AT1G64650 BDG1 RPOD1 AT1G65230 PTAC4 AT1G66130 GDPDL1 ABA4 RBCS1A ATKCR1 PSBY AT1G67870 ATHPR1 ADO3 AT1G68260 BBX14 ATXYL1 PSRP3/1 AT1G68780 FLN2 ARC12 AT-EXP1 HEMB1 CMT3 AMY3 AT1G70200 AT1G70600 ATGH9B1 PGM2 AT1G70820 AtCPB AT1G72250 AT1G72480 EDA17 ATHDG11 AT1G73655 BEE3 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NRP1 GASA6 AT1G74730 AT1G74800 PDE343 RPS9 emb2184 AT1G75460 AtGH9B7 LQY1 TUB1 ATCDSP32 TAPX ATGSTU20 SPS1 emb1473 AT1G78995 PSBR RECA1 ATKS PGK EMB1047 CS17 APT2 AtRLP17 AT1G80440 ATIMD2 WIN1 ARR14 AHK4 ARPN WRKY3 ATNRP1 SKU6 AtHsp90.5 ZIP7 AT2G04039 XERICO AT2G04700 FLA7 AT2G05790 ENR1 PSBX AT2G10970 AGT ABH1 AGP9 AtTic21 OTP51 ATCOR413-PM1 AT2G16365 PFU2 AT2G17033 AT2G17972 HBI1 SCY1 TXND9 ATPRMT1A AT2G19870 ATCAF1 PSAE-2 AT2G20270 ATXIG A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 ATPRP2 PDTPI ATSULA AT2G21300 AtFBA1 AT2G21385 AT2G21530 AT2G21960 SEP2 IAA8 SCPL8 AT2G24020 AT2G24060 PRPL35 AtENODL14 AtGLDP2 ER AT2G26500 ATHO1 CYCB1;4 BASS2 ABCG32 PGY1 AT2G27680 HDA13 CH-CPN60A CSD2 ACA2 AT2G28720 HIS4 AT2G28790 ATEXP6 TUB7 ATPCNA2 PY AtFAD3 EMB3147 AT2G30320 ATFC-II KIS PSBW AT2G30620 ATGSTF7 FTSH2 GUN1 AT2G32060 PRORP1 BAM6 ATGLR3.7 ARASP ATCB5-B ATPDI9 ATCOP1 AT2G33370 DAL PRPL28 EMB3113 AT2G34480 HMR AIR9 NF-YA4 EDA3 GTE01 ATNPSN11 GDCH AT2G35410 AT2G35840 AT2G36350 DML1 RPL24A GAMMA-TIP MAT3 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ATRPS5B AT2G37400 ATEXP3 AT2G37660 CAC3 AtAUX1 PSRP4 PDE328 PnsL1 RCA AteIF3f ELF4 LHCB4.3 ATFER4 AT2G40400 HEME2 ATKT2 ATEXP8 AT2G40660 ARR16 CYP98A3 AT2G41090 ATCBK3 GPDHC1 AT2G41820 AT2G42130 ATOEP16-3 AT2G42220 AT2G42650 AT2G43030 AT2G43090 BIO2 AT2G43560 COS1 AT2G44120 MTHFR2 CHL-CPN10 CYCP4;1 AT2G44870 AT2G44920 AGP8 AT2G45700 PEX11D CPFTSY ATPMM ATHH2 CYP86A8 ATMPK12 SPA1 PSAP CER8 CP12 ATPDI11 PHR2 DEG2 PnsL3 ATBCA1 AT3G02640 EMB2768 ATF1 PDE326 PDE324 emb2171 TPR10 HEL EMB3119 AT3G04840 ATNHX2 AT3G05470 RPL18 Encodes a defensin-like (DEFL) family protein. AT3G06700 AT3G07110 AT3G07310 ATYLMG1-1 AAC1 AT3G08740 DEX1 AT3G09200 PTAC13 AT3G09250 AT3G09440 AT3G09630 ADK1 AT3G09860 AT3G10020 OMR1 AtLCY LGO GYRA LSF2 AT3G11120 AT3G11510 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. AML1 ATHST DRT100 PGK1 AT3G12930 AT3G13120 WIP3 Cpn60beta2 ESM1 ATPME3 GOX2 GOX1 PRPS20 ATMT3 SPA3 ATHM4 AT3G15520 AT3G15570 ADS3 MFP1 AT3G16080 PSAH-1 AQP1 NDF4 EMB2083 AT3G16370 ATEBP AT3G16780 AAE7 RFC3 POK1 RLK902 AT3G18050 AT3G18060 EMB1270 RACK1C MOS4 EMB1865 AtTic62 AT3G18940 POK2 ATPREP1 ATCAD4 CBB1 ATTCP-1 ATTOP6B PSBTN AT3G22150 AT3G22210 AT3G22230 ATWNK2 NET1A ARLIM15 PKP-ALPHA ATCFM3A KINESIN-12B AT3G23700 ATSAHH2 ATTOPII AT3G23940 HSP60 ATMSH1 HCF101 ATMSH7 PLSP1 ERD2B ATFKBP62 ATL5 LAG1 AT3G25660 AtCHUP1 AT3G25805 LTA2 RPL15 ATPRX CYP71B22 GAMMA-TIP2 ORF02 GAPA CCB1 CCL YSL6 ATTSO2 GHS1 AT3G27180 AT3G27360 ATMDAR4 RPL12 RPL12-C ATMES11 AT3G43610 LTPG2 RPL9 AtXTH31 AT3G45030 AT3G45850 AT3G45930 H2B HTB11 AT3G46320 AT3G46630 MAR1 PTAC16 AT3G47070 AT3G47370 ATNOA1 AT3G47650 EDD AT3G48200 ATBT2 AT3G48420 AT3G48460 PDE312 AHAS GSA2 ATBBC1 ATPCA RDR6 DIN11 ATBCAT-3 OEC33 AT3G51280 AT3G51290 ATSSL4 AT3G51720 ATEBP1 ATG4 AT3G52110 PSRP2 CP33 ACA1 FTSZ2-2 AT3G52960 AtPIP2;1 AT3G53430 CP29 AT3G53580 AT3G53730 AT3G53740 ACT3 AT3G53870 HCEF1 FLN1 AT3G54210 AT3G54400 HTA11 ATGR2 LHCA1 PPL1 ATTSC13 ATDFD SBPASE UGP3 AT3G56160 AT3G56370 PSRP5 ACSF ATBZIP61 AT3G58140 AT3G58610 AT3G59780 MTHFR1 CUM2 AT3G60245 AT3G60750 LHCA2 AT3G61870 CYP20-3 UBQ5 ATDUF7 CP12 ABCC14 AT3G62870 CSP41A OEP6 AtcpRRF APG1 EMB3126 Conceptual translation of this open reading frame gave the sequence of a 229-residue hypothetical protein that contains the same sequence as the mature A. thaliana chloroplast luminal 19-kDa protein linked to a putative signal sequence. AT4G00165 ANTR2 AT4G00810 AT4G00895 TROL AT4G01310 AGY1 GLB1 AtGH9B13 AT4G02530 PSAD-1 EMB3129 AT4G02840 AT4G02850 BSM PETC ATHM2 ATPC1 PSBQ ATK5 APX4 ATPD ATSPS4F AT4G10300 LHCB5 AT4G11100 AT4G11175 RHA1B PSAL AT4G12830 AtENODL19 AT4G13170 NYC1 AT4G13840 SHM4 EDA38 AT4G14330 AT4G14480 ATTCX2 FdC1 AO1 TUA6 AT4G15000 CYP97B3 AT4G15545 IAGLU AtCLA1 AT4G15830 AT4G16155 AT4G16450 AT4G16980 DELTA-TIP2 AT4G17390 AT4G17560 LIL3:1 AT4G17740 AT4G18100 ATSS4 CH-42 RPL16B AT4G19410 AK-HSDH MORF1 ATRAB8D AT4G20430 ATRP1 PSBQ ATML1 AKT2 PGR5-LIKE AT4G23740 3xHMG-box2 CRR31 AtHsp90-7 cpHsc70-1 AT4G24350 CER2 PGI AT4G24750 ATRBP31 AT4G24820 AT4G24830 AT4G24930 ACP4 CHLM ATFSD1 MSRA4 ACYB-2 B1 AT4G26370 AtFBA5 MAP65-2 AR192 ATPDI7 AT4G27090 ATPHOS34 PORB NARA5 TET7 AT4G28080 AT4G28360 PSB28 GrxC5 PSAE-1 AT4G28780 emb2726 PFK1 AT4G29360 AT4G29520 AT4G30020 AT4G30330 AT4G30620 scpl29 AT4G30825 FAD6 ATCSLC05 RPS6 AtENODL15 PGR3 AT4G31985 PDE334 AT4G32340 AT4G32530 AtGLDP1 ATPME44 AT4G33500 KUP5 ATBCA5 SEP1 ALDH3 ATCAP1 BLH6 SSR16 AT4G34730 MRL1 AT4G34950 CAT2 PIP2;7 HCF244 XCP1 LTO1 ALDH3F1 AT4G36390 AT4G36530 BEE2 MAP1D XTH7 SHM1 pde191 ATROPGEF1 ATPRP4 AtFBA2 AT4G39040 ATCAD9 PLAT1 AT4G39970 ATPDX1 LHCB4.1 AT5G01590 STN8 OHP AT5G02160 AT5G02450 AT-HSC70-1 AT5G02870 AT5G02960 ATP58IPK ADK2 AT5G03850 54CP GYRB2 FD-GOGAT BTR1 KCS19 AT5G05200 ATEIF2-A2 AtFAD8 ATEGY2 CYC1BAT 2-Cys WCRKC1 AT5G07020 EMS1 ATRPA70B AT5G08050 HEMC FTRA2 AT5G09510 AtPPa6 PMDH2 AT5G10400 AGP4 KAC1 PAS2 EMP1 AT5G10920 OCP3 PPD5 AT5G11480 SSP5 TUB6 DiT1 ATGSL12 AK EMB3136 ABAR SVR3 AT5G13770 ATIMD1 EMB3137 BETA AT5G14910 GASA4 ATMIXTA BCCP2 AT5G16130 AT5G16240 ATF2 DHAR3 ENH1 AT5G17630 AT5G17670 EMB1241 ATCBR PSRP6 ATCIMS CSD3 ATOBGC PCB2 EMB3013 STT3A TUA3 AtRbcX2 ATIPT9 AT5G20290 ATGER3 ATCPN21 CRR42 AT5G22340 AT5G22400 AT5G22440 emb1211 EMB1030 H2B CDF1 HCF136 AT5G23650 TUB8 DCR SQE5 ATSS1 APRR5 AT5G24490 AtENODL13 AT5G25100 EBF2 AT5G25420 AT5G25590 BGLU37 AtTGG1 ATIREG3 AT5G27290 BIP1 AT5G28750 ARRPS1 AT5G35170 AMOS1 CAC2 ATGSL1 G6PD1 AT5G36160 ATPRFB AT5G37010 RBCS3B AT5G38520 APE1 CRR7 UDG4 AT5G39410 OLI7 EMB139 GPDHp ATPHB3 RPL27 RPS10B BIP ABIL4 FTSH5 AT5G42740 RD21B NDH18 AGO10 ATTOM22-V AT5G44000 AT5G44520 AtCEST CLPP4 CHL AT5G45950 APE2 KAT1 KAS1 AT5G46420 BSK2 AT5G46580 TET1 LIL3:2 AT5G47190 AT5G47210 PME5 NF-YB2 AT5G48360 AT5G48460 DIR1 FKBP15-2 AT5G48900 LPA66 EMB2812 OVA2 DDM2 ATFRO7 cpHsc70-2 CPI1 CAA33 AT5G51110 DYAD AT5G51560 ATMAP65-3 At-NEET ATSBT1.3 ATPGMP HCF106 AT5G52650 AT5G52780 AT5G52960 AT5G52970 AT5G53150 FTSH11 PDV1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G54750 THI1 AT5G55220 ATFTSZ1-1 AT5G55520 AT5G55620 CRR21 AtHsp90-3 AtHsp90.2 CSN6A AT5G56670 AT5G56710 AT5G56850 GATA21 AT5G56890 LUT2 AT5G57170 NdhN AT5G58330 AtcPT4 ftsh9 ATUCP2 AT5G59690 AT5G59850 HTA6 HTB4 RIP5 AT5G60390 ATPDX2 AT5G60930 AT5G61170 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ATCNX1 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. ALDH12A1 TUB3 AT5G62710 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. emb2746 ATFP3 GSA1 SHA1 CHR24 PSAN ATERS DCT JK218 AT5G64460 EMB3144 CLEL AT5G65220 AT5G65360 KAC2 ATLFNR1 AT5G66230 AT5G66470 GAMMA MSP-1 ATDDM1 ABA1 RALFL34 RLK PSBA MATK RPS16 RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBM PSBD PSBC YCF9 RPS14 PSAB PSAA YCF3 RPS4 NDHJ PSBG NDHC ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBJ PSBL PSBE ORF31 PETG PSAJ RPL33 RPS18 RPL20 CLPP1 PSBB PSBT PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 NDHF RPL32 YCF5 NDHD PSAC NDHE NDHG NDHI NDHA NDHH RPS15 YCF1.2 ribosomal protein S3
GO:0019682
glyceraldehyde-3-phosphate metabolic pro...		BP3.523e-125AT1G01080 AT1G02150 POR ATHM1 AT1G04420 emb2394 EMB2784 AT1G07440 PSAO ALB-1V ABC1 AVDE1 AT1G09130 CRB ATFD1 CLPP6 AT1G12230 AT1G12800 PnsL2 AT1G14270 AT1G14345 NDF1 FUG1 AT1G18660 LHCA2*1 ATLFNR2 DRT112 AT1G22630 AOR PRK AT1G32470 FdC2 PRPL11 GAPB AT1G49380 GDC1 AT1G51110 AtTLP18.3 ATSCO1 AT1G62780 AT1G65230 PSRP3/1 HEMB1 AT1G74070 emb2184 LQY1 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21530 AT2G21960 SCPL8 AT2G24060 PRPL35 AT2G27680 PY ATFC-II FTSH2 PRPL28 EDA3 GDCH AT2G35410 AT2G37660 AT2G42130 AT2G43030 AT2G43560 AT2G44920 CPFTSY PSAP PHR2 DEG2 ATBCA1 ATF1 PDE326 EMB3119 PTAC13 AT3G09860 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 ATHM4 AT3G15520 ADS3 MFP1 NDF4 EMB1865 AT3G22210 AT3G23700 HCF101 AT3G25805 LTA2 CCB1 RPL9 PTAC16 ATNOA1 AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 PSRP2 CP33 FTSZ2-2 HCEF1 AT3G54210 PPL1 SBPASE ACSF AT3G58140 AT3G59780 AT3G60750 AT3G61870 CYP20-3 CSP41A AtcpRRF APG1 EMB3126 ANTR2 TROL AT4G01310 GLB1 AT4G02530 EMB3129 PETC ATPC1 APX4 ATPD AT4G10300 FdC1 CYP97B3 AtCLA1 AT4G17560 LIL3:1 CH-42 PGR5-LIKE PGI AT4G24750 ACP4 CHLM AtFBA5 NARA5 AT4G28080 PSB28 emb2726 FAD6 PGR3 PDE334 AtGLDP1 SEP1 MRL1 HCF244 LTO1 AtFBA2 AT4G39040 ATPDX1 54CP ATEGY2 2-Cys AT5G08050 HEMC PMDH2 PPD5 EMB3137 AT5G14910 ENH1 PCB2 ATCPN21 HCF136 ARRPS1 ATGSL1 G6PD1 FTSH5 NDH18 AT5G44520 CLPP4 CHL AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 NdhN ATNDPK2 PSAN ATLFNR1 AT5G66470 GAMMA NDHE
GO:0044237
cellular metabolic process		BP5.051e-124AT1G01080 AT1G01100 AT1G01320 CYP86A4 ATGPAT4 AT1G02150 CER1 IMPA-6 ATCSLD5 emb2386 PSAD-2 FZL ATCPO-I PSB27 POR ATHM1 AtTPX2 RPS15 AT1G04420 PDLP2 AT1G04800 TOR2 atTIC20 ATPDI10 emb2394 ATCTL1 ADS1 ORA59 RHON1 OE23 EMB2784 AT1G07440 RPS15A AT1G08360 PSAO ALB-1V ABC1 AVDE1 CJD1 AT1G09130 AtCRT1b AT1G09310 CRB AT1G09590 AT1G09690 ATATP-PRT2 ARR4 Z-ISO ATFD1 MORF9 CLPP6 AT1G11860 AT1G12000 AT1G12230 AT1G12460 ATCCS AT1G12800 ICE2 GAPA-2 MAP1B AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 AT1G14270 RPL10 AT1G14345 ATWHY1 CPN10 ATDEF1 CENP-C CP24 NDF1 HCF173 ACR11 AtHBP1 FUG1 ATARCA ATNACK1 AT1G18540 AT1G18660 LHCA2*1 BES1 ATCLH1 AT1G19740 APS2 TUB5 ATLFNR2 DRT112 AT1G21680 AT1G21740 LYM1 ATCOX6B2 AT1G22630 FB RPL27A AOAT1 ATCAF2 AOR MLP423 BBX15 AT1G27120 APT1 AT1G28530 AT1G29070 ATPEX7 AB180 AB140 PSAK AT1G30580 AT1G30690 ATIMD3 PSAF CXC750 ATROPGEF14 ACBP PRK AT1G32160 AT1G32470 FdC2 PRPL11 PGY2 ATPS1 EMB3003 ARF20 RPL21C expressed protein localized to the inner membrane of the chloroplast. GAPB ARP1 Aty2 AtcFBP CYCA1;1 CP22 AtBGAL5 Lhca5 mtLPD1 EMB3105 RKL1 GATB RACK1B AT1G49010 AT1G49380 UBC20 GDC1 AT1G51110 AT1G52220 PSAH-2 ABA2 AT1G52510 mMDH1 ATMUM4 AtFAP3 AT1G54410 AIN1 AT1G54500 ACP2 G-H2AX AtTLP18.3 AT1G54820 AT1G55140 AGP21 AT1G55360 CPN60B PSAG AT1G56050 AT1G56190 ATSAR1 AtCRT1a AT1G57770 AT1G60000 AT1G60590 ACLA-2 AT1G60890 ATFD2 LHCA3 ACO2 ATSCO1 AT1G62780 AT1G63610 AT1G64510 AT1G64650 BDG1 RPOD1 AT1G65230 AT1G66130 GDPDL1 ABA4 RBCS1A ATKCR1 PSBY ATHPR1 ADO3 AT1G68260 BBX14 ATXYL1 PSRP3/1 FLN2 HEMB1 CMT3 AMY3 AT1G70200 AT1G70600 PGM2 AT1G70820 AT1G72250 EDA17 ATHDG11 AT1G73655 BEE3 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NRP1 AT1G74800 PDE343 RPS9 emb2184 AT1G75460 AtGH9B7 LQY1 TUB1 TAPX ATGSTU20 SPS1 emb1473 AT1G78995 PSBR RECA1 ATKS PGK EMB1047 CS17 APT2 ATIMD2 WIN1 ARR14 AHK4 ARPN WRKY3 AtHsp90.5 AT2G04039 XERICO AT2G04700 FLA7 ENR1 PSBX AGT ABH1 AGP9 OTP51 AT2G16365 PFU2 AT2G17033 AT2G17972 HBI1 SCY1 ATPRMT1A AT2G19870 ATCAF1 PSAE-2 AT2G20270 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21530 AT2G21960 SEP2 IAA8 SCPL8 AT2G24020 AT2G24060 PRPL35 AtENODL14 AtGLDP2 ER AT2G26500 ATHO1 CYCB1;4 BASS2 PGY1 AT2G27680 HDA13 CH-CPN60A CSD2 ACA2 TUB7 ATPCNA2 PY AtFAD3 EMB3147 AT2G30320 ATFC-II PSBW ATGSTF7 FTSH2 AT2G32060 PRORP1 BAM6 ARASP ATCB5-B ATPDI9 ATCOP1 AT2G33370 DAL PRPL28 EMB3113 AT2G34480 HMR NF-YA4 EDA3 GTE01 GDCH AT2G35410 AT2G35840 AT2G36350 DML1 RPL24A GAMMA-TIP MAT3 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ATRPS5B AT2G37660 CAC3 PSRP4 PDE328 PnsL1 RCA AteIF3f LHCB4.3 ATFER4 AT2G40400 HEME2 ATKT2 AT2G40660 ARR16 CYP98A3 ATCBK3 GPDHC1 AT2G41820 AT2G42130 ATOEP16-3 AT2G42220 AT2G42650 AT2G43030 AT2G43090 BIO2 AT2G43560 COS1 AT2G44120 MTHFR2 CHL-CPN10 AT2G44920 AT2G45700 CPFTSY ATPMM ATHH2 CYP86A8 ATMPK12 SPA1 PSAP CER8 CP12 ATPDI11 PHR2 DEG2 PnsL3 ATBCA1 AT3G02640 EMB2768 ATF1 PDE326 PDE324 emb2171 TPR10 HEL EMB3119 AT3G04840 RPL18 Encodes a defensin-like (DEFL) family protein. AT3G06700 AT3G07110 ATYLMG1-1 AAC1 AT3G08740 AT3G09200 PTAC13 AT3G09250 AT3G09440 AT3G09630 ADK1 AT3G09860 AT3G10020 OMR1 AtLCY LGO GYRA LSF2 AT3G11120 AT3G11510 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. AML1 ATHST PGK1 AT3G12930 AT3G13120 Cpn60beta2 ESM1 ATPME3 GOX2 GOX1 PRPS20 SPA3 ATHM4 AT3G15520 AT3G15570 ADS3 MFP1 AT3G16080 PSAH-1 NDF4 EMB2083 AT3G16370 ATEBP AT3G16780 AAE7 RFC3 POK1 RLK902 AT3G18060 EMB1270 RACK1C MOS4 EMB1865 AtTic62 AT3G18940 ATPREP1 ATCAD4 CBB1 ATTCP-1 ATTOP6B PSBTN AT3G22150 AT3G22210 AT3G22230 ATWNK2 NET1A ARLIM15 PKP-ALPHA ATCFM3A AT3G23700 ATSAHH2 ATTOPII AT3G23940 HSP60 ATMSH1 HCF101 ATMSH7 PLSP1 ERD2B ATFKBP62 ATL5 LAG1 AT3G25660 AtCHUP1 AT3G25805 LTA2 RPL15 ATPRX GAMMA-TIP2 ORF02 GAPA CCB1 ATTSO2 GHS1 AT3G27180 ATMDAR4 RPL12 RPL12-C ATMES11 LTPG2 RPL9 AtXTH31 AT3G45030 PTAC16 AT3G47070 AT3G47370 ATNOA1 AT3G47650 EDD AT3G48200 ATBT2 AT3G48420 AT3G48460 PDE312 AHAS GSA2 ATBBC1 ATPCA RDR6 ATBCAT-3 OEC33 AT3G51280 AT3G51290 ATSSL4 ATEBP1 ATG4 PSRP2 CP33 ACA1 FTSZ2-2 AT3G52960 AtPIP2;1 AT3G53430 CP29 AT3G53580 AT3G53740 AT3G53870 HCEF1 FLN1 AT3G54210 AT3G54400 HTA11 ATGR2 LHCA1 PPL1 ATTSC13 ATDFD SBPASE UGP3 AT3G56370 PSRP5 ACSF ATBZIP61 AT3G58140 AT3G58610 AT3G59780 MTHFR1 CUM2 AT3G60245 AT3G60750 LHCA2 AT3G61870 CYP20-3 UBQ5 ATDUF7 CP12 AT3G62870 CSP41A OEP6 AtcpRRF APG1 EMB3126 Conceptual translation of this open reading frame gave the sequence of a 229-residue hypothetical protein that contains the same sequence as the mature A. thaliana chloroplast luminal 19-kDa protein linked to a putative signal sequence. AT4G00165 ANTR2 AT4G00810 AT4G00895 TROL AT4G01310 AGY1 GLB1 AtGH9B13 AT4G02530 PSAD-1 EMB3129 AT4G02840 BSM PETC ATPC1 PSBQ ATK5 APX4 ATPD ATSPS4F AT4G10300 LHCB5 AT4G11100 AT4G11175 RHA1B PSAL AT4G12830 AT4G13170 NYC1 AT4G13840 SHM4 AT4G14330 AT4G14480 ATTCX2 FdC1 TUA6 AT4G15000 CYP97B3 AT4G15545 IAGLU AtCLA1 AT4G16155 AT4G16450 AT4G16980 AT4G17390 AT4G17560 LIL3:1 AT4G17740 AT4G18100 ATSS4 CH-42 RPL16B AK-HSDH MORF1 ATRAB8D ATRP1 PSBQ ATML1 AKT2 PGR5-LIKE AT4G23740 3xHMG-box2 CRR31 AtHsp90-7 cpHsc70-1 AT4G24350 CER2 PGI AT4G24750 ATRBP31 AT4G24820 AT4G24830 AT4G24930 ACP4 CHLM ATFSD1 MSRA4 ACYB-2 B1 AT4G26370 AtFBA5 MAP65-2 AR192 AT4G27090 PORB NARA5 AT4G28080 AT4G28360 PSB28 PSAE-1 AT4G28780 emb2726 PFK1 AT4G29360 AT4G29520 AT4G30020 AT4G30330 AT4G30620 AT4G30825 FAD6 RPS6 AtENODL15 PGR3 AT4G31985 PDE334 AT4G32340 AtGLDP1 AT4G33500 KUP5 ATBCA5 SEP1 ALDH3 BLH6 SSR16 AT4G34730 MRL1 AT4G34950 CAT2 HCF244 XCP1 LTO1 ALDH3F1 AT4G36390 AT4G36530 BEE2 MAP1D XTH7 SHM1 pde191 ATPRP4 AtFBA2 AT4G39040 ATCAD9 PLAT1 AT4G39970 ATPDX1 LHCB4.1 AT5G01590 STN8 OHP AT5G02160 AT5G02450 AT-HSC70-1 AT5G02870 AT5G02960 ATP58IPK ADK2 AT5G03850 54CP GYRB2 FD-GOGAT BTR1 KCS19 AT5G05200 ATEIF2-A2 AtFAD8 ATEGY2 CYC1BAT 2-Cys AT5G07020 EMS1 ATRPA70B AT5G08050 HEMC FTRA2 AT5G09510 AtPPa6 PMDH2 AGP4 PAS2 EMP1 AT5G10920 OCP3 PPD5 AT5G11480 SSP5 TUB6 DiT1 ATGSL12 AK EMB3136 ABAR SVR3 ATIMD1 EMB3137 BETA AT5G14910 GASA4 ATMIXTA BCCP2 AT5G16130 AT5G16240 DHAR3 ENH1 AT5G17670 EMB1241 ATCBR PSRP6 ATCIMS CSD3 ATOBGC PCB2 EMB3013 STT3A AtRbcX2 ATIPT9 AT5G20290 ATGER3 ATCPN21 CRR42 AT5G22340 AT5G22440 EMB1030 HCF136 AT5G23650 TUB8 SQE5 ATSS1 APRR5 AT5G24490 AT5G25100 EBF2 AT5G25590 BGLU37 AtTGG1 BIP1 ARRPS1 AT5G35170 AMOS1 CAC2 ATGSL1 G6PD1 AT5G36160 ATPRFB AT5G37010 RBCS3B AT5G38520 APE1 CRR7 UDG4 OLI7 GPDHp ATPHB3 RPL27 RPS10B BIP FTSH5 AT5G42740 RD21B NDH18 AGO10 AT5G44000 AT5G44520 AtCEST CLPP4 CHL AT5G45950 APE2 KAS1 AT5G46420 BSK2 AT5G46580 TET1 LIL3:2 AT5G47190 AT5G47210 PME5 NF-YB2 AT5G48360 FKBP15-2 LPA66 EMB2812 OVA2 DDM2 ATFRO7 cpHsc70-2 CPI1 CAA33 AT5G51110 DYAD AT5G51560 ATMAP65-3 At-NEET ATPGMP AT5G52650 AT5G52780 AT5G52960 AT5G52970 AT5G53150 FTSH11 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G54750 THI1 AT5G55220 ATFTSZ1-1 AT5G55520 CRR21 AtHsp90-3 AtHsp90.2 CSN6A AT5G56670 AT5G56710 AT5G56850 GATA21 AT5G56890 LUT2 NdhN AT5G58330 AtcPT4 ftsh9 ATUCP2 AT5G59850 HTB4 AT5G60390 ATPDX2 AT5G61170 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ATCNX1 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. ALDH12A1 AT5G62710 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. emb2746 GSA1 SHA1 CHR24 PSAN ATERS DCT JK218 EMB3144 AT5G65220 KAC2 ATLFNR1 AT5G66230 AT5G66470 GAMMA MSP-1 ATDDM1 ABA1 RLK PSBA MATK RPS16 RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBM PSBD PSBC YCF9 RPS14 PSAB PSAA YCF3 RPS4 NDHJ PSBG NDHC ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBJ PSBL PSBE ORF31 PETG PSAJ RPL33 RPS18 RPL20 CLPP1 PSBB PSBT PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 NDHF RPL32 YCF5 NDHD PSAC NDHE NDHG NDHI NDHA NDHH RPS15 ribosomal protein S3
GO:0006081
cellular aldehyde metabolic process		BP6.809e-123AT1G01080 AT1G02150 CER1 ATCPO-I POR ATHM1 AT1G04420 emb2394 EMB2784 AT1G07440 PSAO ALB-1V ABC1 AVDE1 AT1G09130 CRB ATFD1 CLPP6 AT1G12230 AT1G12800 MAP1B PnsL2 AT1G14270 AT1G14345 NDF1 FUG1 AT1G18660 LHCA2*1 ATLFNR2 DRT112 AT1G21680 AT1G22630 AOR PRK AT1G32470 FdC2 PRPL11 GAPB AT1G49380 GDC1 AT1G51110 AtTLP18.3 ATSCO1 AT1G62780 AT1G65230 PSRP3/1 HEMB1 AT1G74070 emb2184 LQY1 AT2G20270 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21530 AT2G21960 SCPL8 AT2G24020 AT2G24060 PRPL35 AT2G27680 PY ATFC-II FTSH2 PRPL28 EDA3 GDCH AT2G35410 AT2G37660 AT2G42130 AT2G43030 AT2G43560 AT2G44920 CPFTSY PSAP PHR2 DEG2 ATBCA1 ATF1 PDE326 EMB3119 PTAC13 AT3G09860 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 ATHM4 AT3G15520 ADS3 MFP1 NDF4 AAE7 RFC3 EMB1865 AT3G22210 AT3G23700 HCF101 AT3G25805 LTA2 CCB1 RPL9 PTAC16 ATNOA1 AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 PSRP2 CP33 FTSZ2-2 HCEF1 AT3G54210 PPL1 SBPASE ACSF AT3G58140 AT3G59780 AT3G60750 AT3G61870 CYP20-3 CSP41A AtcpRRF APG1 EMB3126 ANTR2 TROL AT4G01310 GLB1 AT4G02530 EMB3129 PETC ATPC1 APX4 ATPD AT4G10300 FdC1 CYP97B3 AtCLA1 AT4G17560 LIL3:1 CH-42 PGR5-LIKE PGI AT4G24750 ACP4 CHLM AtFBA5 NARA5 AT4G28080 PSB28 emb2726 AT4G30620 FAD6 PGR3 PDE334 AtGLDP1 ATBCA5 SEP1 ALDH3 MRL1 HCF244 LTO1 ALDH3F1 AtFBA2 AT4G39040 ATPDX1 54CP ATEGY2 2-Cys AT5G08050 HEMC PMDH2 PPD5 EMB3137 BETA AT5G14910 ENH1 PCB2 ATCPN21 HCF136 ARRPS1 ATGSL1 G6PD1 FTSH5 NDH18 AT5G44520 CLPP4 CHL AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 NdhN ATNDPK2 PSAN ATLFNR1 AT5G66470 GAMMA RPS14 NDHE
GO:0009657
plastid organization		BP1.986e-121AT1G02150 FZL PSB27 POR ATHM1 emb2394 RHON1 OE23 ATTIC110 PSAO ABC1 CRB MORF9 CLPP6 AT1G11860 AT1G12800 GAPA-2 FUG1 ATLFNR2 DRT112 AT1G21350 PRK AtLrgB AT1G32470 PRPL11 RPL21C GAPB Aty2 AT1G44000 CP22 Lhca5 AT1G49380 GDC1 AT1G51110 AT1G52220 PSAH-2 AtTLP18.3 ATSCO1 AT1G62780 AT1G64510 AT1G65230 PTAC4 PSBY ATHPR1 PSRP3/1 FLN2 ARC12 AT1G70200 PDE343 emb2184 LQY1 TAPX EMB1047 CS17 AtHsp90.5 AT2G16365 SCY1 ATCAF1 PSB29 PDTPI ATSULA AtFBA1 AT2G21530 AT2G26500 AT2G27680 CH-CPN60A PSBW FTSH2 ARASP DAL HMR EDA3 GDCH AT2G35410 PSRP4 PDE328 ATFER4 AT2G42130 AT2G43560 AT2G44870 CPFTSY SPA1 PSAP DEG2 EMB2768 PDE324 ATYLMG1-1 PTAC13 PGK1 AT3G13120 Cpn60beta2 ATHM4 MFP1 PSAH-1 EMB1270 EMB1865 ATPREP1 PSBTN AT3G23700 HCF101 PLSP1 AtCHUP1 GAPA CCB1 MAR1 PTAC16 AT3G47070 ATNOA1 AT3G47650 EDD AT3G48200 AT3G48420 PDE312 OEC33 ATSSL4 ATG4 CP33 FTSZ2-2 HCEF1 FLN1 ATGR2 PPL1 SBPASE PSRP5 ACSF AT3G58140 AT3G61870 CSP41A AtcpRRF EMB3126 TROL AGY1 AT4G02530 PSAD-1 EMB3129 BSM PETC ATPC1 ATPD AT4G11175 PSAL LIL3:1 PSBQ ATML1 PGR5-LIKE cpHsc70-1 AT4G24750 ACP4 AT4G26370 NARA5 PSAE-1 emb2726 PGR3 PDE334 SEP1 SSR16 AT4G34730 MRL1 pde191 AtFBA2 FD-GOGAT ATEGY2 2-Cys AT5G07020 AT5G08050 PMDH2 KAC1 PPD5 AT5G11480 EMB3136 AT5G13770 DHAR3 ENH1 ATOBGC ATCPN21 emb1211 HCF136 ARRPS1 AMOS1 ATPRFB AT5G38520 EMB139 NDH18 AtCEST CLPP4 KAS1 AT5G47190 OVA2 CAA33 AT5G51110 HCF106 AT5G52970 PDV1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 ATFTSZ1-1 AT5G58330 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ATERS EMB3144 AT5G65220 KAC2 ATLFNR1 AT5G66470 MSP-1
GO:0044281
small molecule metabolic process		BP1.336e-118AT1G01080 CYP86A4 ATGPAT4 AT1G02150 emb2386 FZL ATCPO-I POR ATHM1 AT1G04420 ATPDI10 emb2394 ATCTL1 ADS1 OE23 EMB2784 AT1G07440 PSAO ALB-1V ABC1 AVDE1 ACHT4 CJD1 AT1G09130 AT1G09310 CRB ATATP-PRT2 ATFD1 MORF9 CLPP6 AT1G11860 AT1G12000 AT1G12230 AT1G12800 GAPA-2 MAP1B AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 AT1G14270 AT1G14345 CP24 NDF1 AtHBP1 FUG1 ATARCA AT1G18660 LHCA2*1 ATLFNR2 DRT112 AT1G21680 AT1G22630 AOAT1 AOR APT1 AT1G28530 ATPEX7 PSAK AT1G30580 AT1G30690 ATIMD3 PSAF CXC750 ATROPGEF14 ACBP PRK AT1G32470 FdC2 PRPL11 EMB3003 expressed protein localized to the inner membrane of the chloroplast. GAPB Aty2 CP22 AtBGAL5 GATB RACK1B AT1G49380 ATHX GDC1 AT1G51110 PSAH-2 ABA2 mMDH1 ATMUM4 AtFAP3 ACP2 AtTLP18.3 AGP21 AT1G55360 PSAG AT1G56190 AT1G60000 LHCA3 ACO2 ATSCO1 AT1G62780 AT1G64650 BDG1 AT1G65230 AT1G66130 GDPDL1 ABA4 ATKCR1 PSBY ATHPR1 AT1G68260 PSRP3/1 FLN2 HEMB1 AT1G70820 EDA17 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NRP1 emb2184 AtGH9B7 LQY1 ATCDSP32 ATGSTU20 SPS1 PSBR ATKS PGK APT2 ATIMD2 WIN1 XERICO FLA7 ENR1 ABH1 AGP9 AT2G17033 AT2G20270 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21530 AT2G21960 SCPL8 AT2G24020 AT2G24060 PRPL35 AtGLDP2 BASS2 AT2G27680 HDA13 ACA2 PY AtFAD3 EMB3147 ATFC-II ATGSTF7 FTSH2 ATCB5-B ATPDI9 PRPL28 NF-YA4 EDA3 GDCH AT2G35410 GAMMA-TIP MAT3 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 CAC3 PnsL1 RCA ATKT2 AT2G40660 AT2G42130 AT2G42220 AT2G43030 AT2G43090 BIO2 AT2G43560 COS1 MTHFR2 CHL-CPN10 AT2G44920 CPFTSY ATPMM ATHH2 CYP86A8 PSAP CER8 ATPDI11 PHR2 DEG2 ATBCA1 EMB2768 ATF1 PDE326 EMB3119 AT3G04840 RPL18 Encodes a defensin-like (DEFL) family protein. ATYLMG1-1 PTAC13 AT3G09630 ADK1 AT3G09860 OMR1 GYRA Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST PGK1 AT3G12930 AT3G13120 ESM1 ATPME3 ATHM4 AT3G15520 ADS3 MFP1 NDF4 AT3G16370 AT3G16780 AAE7 RFC3 RACK1C EMB1865 AT3G18940 CBB1 ATTCP-1 AT3G22210 PKP-ALPHA AT3G23700 ATSAHH2 AT3G23940 HCF101 PLSP1 ERD2B ATL5 LAG1 AT3G25805 LTA2 ATPRX GAMMA-TIP2 GAPA CCB1 ATTSO2 ATMDAR4 LTPG2 RPL9 PTAC16 ATNOA1 AT3G47650 EDD AT3G48200 AT3G48420 AT3G48460 AHAS GSA2 ATBCAT-3 OEC33 ATEBP1 ATG4 PSRP2 CP33 ACA1 FTSZ2-2 AtPIP2;1 AT3G53580 HCEF1 AT3G54210 AT3G54400 PPL1 ATTSC13 ATDFD SBPASE ACSF AT3G58140 AT3G58610 AT3G59780 MTHFR1 AT3G60750 AT3G61870 CYP20-3 CSP41A AtcpRRF APG1 EMB3126 ANTR2 AT4G00895 TROL AT4G01310 GLB1 AT4G02530 PSAD-1 EMB3129 PETC ATHM2 ATPC1 APX4 ATPD AT4G10300 LHCB5 AT4G13840 SHM4 FdC1 CYP97B3 IAGLU AtCLA1 AT4G17390 AT4G17560 LIL3:1 CH-42 AK-HSDH ATRAB8D ATRP1 AKT2 PGR5-LIKE AtHsp90-7 AT4G24350 CER2 PGI AT4G24750 ATRBP31 AT4G24820 AT4G24830 AT4G24930 ACP4 CHLM MSRA4 ACYB-2 B1 AT4G26370 AtFBA5 AR192 PORB NARA5 AT4G28080 PSB28 PSAE-1 emb2726 PFK1 AT4G30020 AT4G30620 FAD6 PGR3 PDE334 AtGLDP1 KUP5 ATBCA5 SEP1 MRL1 AT4G34950 HCF244 LTO1 AT4G36390 MAP1D XTH7 SHM1 ATPRP4 AtFBA2 AT4G39040 PLAT1 AT4G39970 ATPDX1 AT-HSC70-1 AT5G02870 ADK2 54CP FD-GOGAT KCS19 ATEIF2-A2 AtFAD8 ATEGY2 2-Cys WCRKC1 AT5G08050 HEMC FTRA2 AtPPa6 PMDH2 AGP4 PAS2 AT5G10920 PPD5 TUB6 DiT1 AK ATIMD1 EMB3137 BETA AT5G14910 GASA4 BCCP2 AT5G16240 ATF2 ENH1 ATCIMS PCB2 ATIPT9 ATCPN21 AT5G22340 EMB1030 HCF136 SQE5 BGLU37 AtTGG1 ARRPS1 AT5G35170 CAC2 ATGSL1 G6PD1 AT5G36160 AT5G38520 UDG4 OLI7 FTSH5 AT5G42740 NDH18 AT5G44520 CLPP4 CHL AT5G45950 APE2 KAS1 AT5G46580 TET1 LIL3:2 AT5G47210 OVA2 CPI1 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52960 AT5G52970 FTSH11 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 THI1 AT5G55220 ATFTSZ1-1 CSN6A NdhN AT5G58330 AtcPT4 HTB4 ATPDX2 ALDH12A1 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. GSA1 PSAN ATERS DCT ATLFNR1 AT5G66470 GAMMA MSP-1 ABA1 ATPA ATPF ATPH ATPI RPS14 ATPE ATPB ACCD NDHF NDHD NDHE
GO:0044711
single-organism biosynthetic process		BP1.944e-113AT1G01080 ATGPAT4 AT1G02150 CER1 ATCSLD5 emb2386 FZL ATCPO-I POR ATHM1 AtTPX2 AT1G04420 TOR2 emb2394 ATCTL1 ADS1 RHON1 OE23 EMB2784 AT1G07440 PSAO ALB-1V ABC1 AVDE1 AT1G09130 AT1G09310 CRB ATATP-PRT2 Z-ISO ATFD1 MORF9 CLPP6 AT1G11860 AT1G12230 AT1G12800 AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14270 AT1G14345 ATWHY1 CENP-C CP24 NDF1 AtHBP1 FUG1 ATARCA AT1G18660 LHCA2*1 AT1G19960 TUB5 ATLFNR2 DRT112 AT1G22630 ATPIN7 AOAT1 AOR APT1 AT1G28530 PSAK UGT78D1 AT1G30580 AT1G30690 ATIMD3 PSAF CXC750 ATROPGEF14 ACBP PRK AT1G32470 FdC2 PRPL11 EMB3003 RPL21C expressed protein localized to the inner membrane of the chloroplast. GAPB Aty2 AtcFBP CP22 AtBGAL5 RACK1B AT1G49380 UBC20 GDC1 AT1G51110 PSAH-2 ABA2 mMDH1 ATMUM4 AIN1 ACP2 AtTLP18.3 AGP21 AT1G55360 CPN60B PSAG AT1G56050 AT1G56190 ATSAR1 AT1G57770 AT1G60000 LHCA3 ACO2 ATSCO1 AT1G62780 AT1G64650 BDG1 AT1G65230 AT1G66130 ABA4 ATKCR1 PSBY ATHPR1 AT1G68260 PSRP3/1 FLN2 HEMB1 PGM2 AT1G70820 AT1G73655 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NRP1 PDE343 emb2184 AtGH9B7 TUB1 ATGSTU20 SPS1 PSBR ATKS CS17 APT2 ATIMD2 WIN1 AT2G03310 SKU6 AT2G04700 FLA7 ENR1 ABH1 AGP9 AT2G17033 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21530 SCPL8 AT2G24060 ER ATHO1 BASS2 AT2G27680 HDA13 TUB7 ATPCNA2 PY AtFAD3 EMB3147 ATFC-II ATGSTF7 FTSH2 BAM6 ATCB5-B DAL PRPL28 HMR NF-YA4 EDA3 GDCH AT2G35410 AT2G35840 MAT3 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 CAC3 AtAUX1 PSRP4 PDE328 PnsL1 RCA AT2G40400 HEME2 ATKT2 AT2G40660 CYP98A3 AT2G42130 AT2G42220 AT2G43030 AT2G43090 BIO2 AT2G43560 COS1 CHL-CPN10 AT2G44920 CPFTSY ATPMM CER8 CP12 ATPDI11 PHR2 DEG2 PnsL3 ATBCA1 EMB2768 ATF1 PDE326 PDE324 EMB3119 AT3G04840 RPL18 Encodes a defensin-like (DEFL) family protein. ATYLMG1-1 AAC1 PTAC13 AT3G09630 ADK1 AT3G09860 OMR1 AtLCY LGO GYRA LSF2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST PGK1 AT3G12930 AT3G13120 ESM1 ATPME3 PRPS20 ATHM4 AT3G15520 AT3G15570 ADS3 MFP1 NDF4 EMB2083 AT3G16370 AT3G16780 EMB1270 RACK1C EMB1865 ATCAD4 CBB1 ATTCP-1 ATTOP6B AT3G22210 PKP-ALPHA AT3G23530 AT3G23700 ATSAHH2 AT3G23940 HCF101 PLSP1 ERD2B ATL5 LAG1 AT3G25660 AtCHUP1 AT3G25805 LTA2 ATPRX GAMMA-TIP2 ORF02 GAPA CCB1 ATTSO2 ATMDAR4 RPL9 PTAC16 ATNOA1 AT3G47650 AT3G48200 AT3G48420 AT3G48460 PDE312 AHAS GSA2 OEC33 ATEBP1 ATG4 PSRP2 CP33 FTSZ2-2 AtPIP2;1 AT3G53580 HCEF1 FLN1 AT3G54210 AT3G54400 ATTSC13 ATDFD SBPASE UGP3 PSRP5 ACSF AT3G58140 AT3G58610 AT3G59780 AT3G60750 AT3G61870 CYP20-3 CP12 CSP41A OEP6 AtcpRRF APG1 EMB3126 AT4G00895 TROL AT4G01310 GLB1 AT4G02530 PSAD-1 EMB3129 BSM PETC ATPC1 ATK5 APX4 ATPD ATSPS4F AT4G10300 LHCB5 AT4G13840 FdC1 TUA6 CYP97B3 AtCLA1 AT4G17390 AT4G17560 LIL3:1 AT4G17740 ATSS4 CH-42 AK-HSDH ATRP1 AKT2 PGR5-LIKE AtHsp90-7 CER2 PGI AT4G24750 ATRBP31 AT4G24820 AT4G24830 AT4G24930 ACP4 CHLM ACYB-2 B1 AT4G26370 AtFBA5 MAP65-2 AR192 PORB NARA5 AT4G28080 PSB28 PSAE-1 emb2726 AT4G30020 FAD6 PGR3 PDE334 AtGLDP1 AT4G33500 KUP5 SEP1 ATCAP1 MRL1 AT4G34950 HCF244 XCP1 LTO1 AT4G36390 AT4G36530 MAP1D XTH7 SHM1 ATROPGEF1 ATPRP4 AtFBA2 AT4G39040 ATCAD9 PLAT1 AT4G39970 ATPDX1 AT-HSC70-1 AT5G02870 ADK2 54CP FD-GOGAT KCS19 AT5G05200 ATEIF2-A2 AtFAD8 ATEGY2 2-Cys AT5G07020 AT5G08050 HEMC FTRA2 AtPPa6 PMDH2 AGP4 PAS2 AT5G10920 PPD5 TUB6 DiT1 ATGSL12 AK EMB3136 ABAR ATIMD1 EMB3137 BETA AT5G14910 GASA4 BCCP2 AT5G16240 ATCIMS PCB2 ATIPT9 ATCPN21 AT5G22340 HCF136 TUB8 SQE5 ATSS1 ARRPS1 CAC2 ATGSL1 G6PD1 AT5G36160 ATPRFB AT5G38520 APE1 CRR7 UDG4 OLI7 FTSH5 AT5G42740 NDH18 AT5G44520 CLPP4 CHL APE2 KAS1 AT5G46420 AT5G46580 TET1 AT5G47210 OVA2 CPI1 AT5G51110 ATMAP65-3 ATPGMP AT5G52960 AT5G52970 FTSH11 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G54750 THI1 AT5G55220 ATFTSZ1-1 CSN6A GATA21 LUT2 NdhN AT5G58330 AtcPT4 ATPDX2 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. GSA1 SHA1 PSAN JK218 AT5G65220 ATLFNR1 AT5G66470 GAMMA MSP-1 ABA1 ATPA ATPF ATPH ATPI ATPE ATPB ACCD NDHD NDHE
GO:0071704
organic substance metabolic process		BP1.573e-111AT1G01080 AT1G01100 AT1G01320 CYP86A4 ATGPAT4 ATSBT1.1 AT1G02150 CER1 IMPA-6 ATCSLD5 emb2386 PSAD-2 FZL ATCPO-I PSB27 POR ATHM1 AtTPX2 AtSDD1 RPS15 AT1G04420 PDLP2 AT1G04800 TOR2 ATPDI10 emb2394 ATHEX3 ATCTL1 ADS1 ORA59 RHON1 AT1G06360 OE23 EMB2784 AT1G07440 RPS15A AT1G08360 PSAO ALB-1V ABC1 AVDE1 ACHT4 CJD1 AT1G09130 AtCRT1b AT1G09310 CRB AT1G09590 AT1G09690 AT1G09750 ATATP-PRT2 ARR4 AT1G10640 Z-ISO ATFD1 MORF9 CLPP6 AT1G11860 AT1G12000 AT1G12230 AT1G12460 AT1G12800 ICE2 GAPA-2 MAP1B AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 AT1G14270 RPL10 AT1G14345 ATWHY1 CPN10 ATDEF1 CENP-C CP24 NDF1 HCF173 AtHBP1 FUG1 ATARCA ATNACK1 AT1G18540 AT1G18660 LHCA2*1 BES1 ATCLH1 AT1G19740 AT1G19960 TUB5 ATLFNR2 DRT112 AT1G21680 AT1G21740 LYM1 AT1G22630 FB ATCYTC-A ATPIN7 RPL27A AOAT1 ATCAF2 AOR MLP423 BBX15 AT1G27120 APT1 AT1G28530 AT1G29070 ATPEX7 AT1G29660 PSAK UGT78D1 AT1G30580 AT1G30600 AT1G30690 ATIMD3 PSAF CXC750 ATROPGEF14 AT1G31690 ACBP PRK AT1G32160 AT1G32470 FdC2 PRPL11 PGY2 AT1G33811 ATPS1 EMB3003 ARF20 RPL21C expressed protein localized to the inner membrane of the chloroplast. GAPB ARP1 Aty2 AtcFBP CYCA1;1 CP22 AtBGAL5 Lhca5 EMB3105 RKL1 GATB RACK1B AT1G49010 AT1G49380 ATPREP2 ATHX UBC20 GDC1 AT1G51110 AT1G52220 PSAH-2 ABA2 AT1G52510 mMDH1 ATMUM4 AtFAP3 AIN1 AT1G54500 ACP2 G-H2AX AtTLP18.3 AT1G54820 AT1G55140 AGP21 AT1G55360 CPN60B PSAG AT1G56050 AT1G56190 ATSAR1 AtCRT1a AT1G57770 AT1G60000 AT1G60590 ACLA-2 AT1G60890 LHCA3 ACO2 ATSCO1 AT1G62780 AtGH9C2 AT1G64510 AT1G64650 BDG1 RPOD1 AT1G65230 AT1G66130 GDPDL1 ABA4 RBCS1A ATKCR1 PSBY AT1G67870 ATHPR1 ADO3 AT1G68260 BBX14 ATXYL1 PSRP3/1 FLN2 HEMB1 CMT3 AMY3 AT1G70200 AT1G70600 ATGH9B1 PGM2 AT1G70820 AT1G72250 EDA17 ATHDG11 AT1G73655 BEE3 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NRP1 AT1G74800 PDE343 RPS9 emb2184 AT1G75460 AtGH9B7 LQY1 TUB1 ATCDSP32 ATGSTU20 SPS1 emb1473 AT1G78995 PSBR RECA1 ATKS PGK EMB1047 CS17 APT2 ATIMD2 WIN1 ARR14 AHK4 ARPN AT2G03310 WRKY3 SKU6 AtHsp90.5 AT2G04060 XERICO AT2G04700 FLA7 AT2G05790 ENR1 ABH1 AGP9 OTP51 AT2G16365 PFU2 AT2G17033 AT2G17972 HBI1 SCY1 SLP3 ATPRMT1A AT2G19870 ATCAF1 AT2G20270 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21530 AT2G21960 IAA8 SCPL13 SCPL8 AT2G24020 AT2G24060 PRPL35 AtENODL14 AtGLDP2 ER AT2G26500 ATHO1 CYCB1;4 BASS2 PGY1 AT2G27680 HDA13 CH-CPN60A CSD2 BGAL8 TUB7 ATPCNA2 PY AtFAD3 EMB3147 AT2G30320 ATFC-II PSBW ATGSTF7 FTSH2 AT2G32060 PRORP1 BAM6 ARASP ATCB5-B BGLU33 ATPDI9 ATCOP1 AtGH9B8 AT2G33370 DAL PRPL28 EMB3113 AT2G34480 HMR NF-YA4 EDA3 GTE01 GDCH AT2G35410 scpl26 AT2G35840 AT2G36350 DML1 RPL24A GAMMA-TIP MAT3 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ATRPS5B AT2G37660 CAC3 AtAUX1 PSRP4 PDE328 PnsL1 RCA AT2G39850 AteIF3f LHCB4.3 AT2G40400 HEME2 ATKT2 AT2G40660 ARR16 CYP98A3 ATCBK3 GPDHC1 AT2G41820 AT2G42130 ATOEP16-3 AT2G42220 AT2G42650 AT2G43030 AT2G43090 BIO2 AT2G43560 COS1 AT2G44120 MTHFR2 CHL-CPN10 AT2G44920 AT2G45700 CPFTSY ATPMM ATHH2 CYP86A8 ATMPK12 SPA1 PSAP CER8 CP12 ATPDI11 PHR2 DEG2 PnsL3 ATBCA1 AT3G02640 EMB2768 ATF1 PDE326 PDE324 ATLTL1 emb2458 emb2171 TPR10 HEL EMB3119 AT3G04840 RPL18 Encodes a defensin-like (DEFL) family protein. AT3G06700 AT3G07110 ATYLMG1-1 AAC1 AT3G08740 AT3G09200 PTAC13 AT3G09250 AT3G09440 AT3G09630 ADK1 AT3G09860 OMR1 AtLCY LGO CYP77A6 GYRA LSF2 AT3G11120 AT3G11510 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. AML1 ATHST PGK1 AT3G12930 AT3G13120 Cpn60beta2 ESM1 AT3G14220 ATPME3 PRPS20 ATMT3 SPA3 ATHM4 AT3G15520 AT3G15570 ADS3 MFP1 AT3G16080 PSAH-1 NDF4 EMB2083 AT3G16370 ATEBP AT3G16780 AAE7 RFC3 POK1 RLK902 AT3G18060 EMB1270 RACK1C MOS4 EMB1865 AtTic62 AT3G18940 ATPREP1 ATCAD4 CBB1 ATTCP-1 ATTOP6B PSBTN AT3G22150 AT3G22210 AT3G22230 ATWNK2 NET1A ARLIM15 PKP-ALPHA ATCFM3A AT3G23530 AT3G23700 ATSAHH2 ATTOPII AT3G23940 HSP60 ATMSH1 HCF101 ATMSH7 PLSP1 ERD2B ATFKBP62 ATL5 LAG1 AT3G25660 AtCHUP1 AT3G25805 LTA2 RPL15 ATPRX GAMMA-TIP2 ORF02 GAPA CCB1 ATTSO2 GHS1 AT3G27180 ATMDAR4 RPL12 RPL12-C ATMES11 AT3G43670 LTPG2 RPL9 AtXTH31 AT3G45030 PTAC16 AT3G47070 AT3G47370 ATNOA1 AT3G47650 EDD AT3G48200 ATBT2 AT3G48420 AT3G48460 PDE312 AHAS GSA2 ATBBC1 RDR6 ATBCAT-3 AT3G49880 OEC33 AT3G51280 AT3G51290 ATSSL4 ATEBP1 ATG4 PSRP2 CP33 FTSZ2-2 AT3G52960 AtPIP2;1 AT3G53430 CP29 AT3G53580 AT3G53740 AT3G53870 HCEF1 FLN1 AT3G54210 AT3G54400 HTA11 ATGR2 AMP1 LHCA1 ATHEX2 PPL1 ATTSC13 ATDFD SBPASE UGP3 AT3G56370 PSRP5 ACSF ATBZIP61 AT3G58140 AT3G58610 AT3G59780 MTHFR1 CUM2 AT3G60245 AT3G60750 AT3G61490 AT3G61870 CYP20-3 AT3G62110 UBQ5 ATDUF7 CP12 BGLU8 AT3G62870 CSP41A OEP6 AtcpRRF APG1 EMB3126 AT4G00165 ANTR2 AT4G00810 AT4G00895 TROL AT4G01310 GLB1 AtGH9B13 AT4G02530 PSAD-1 EMB3129 AT4G02840 BSM PETC ATHM2 ATPC1 PSBQ ATK5 APX4 ATPD ATSPS4F AT4G10300 LHCB5 AT4G11100 AT4G11175 RHA1B PSAL AT4G12830 AT4G13170 NYC1 AT4G13840 SHM4 AT4G14330 AT4G14480 ATTCX2 FdC1 AO1 TUA6 AT4G15000 CYP97B3 AT4G15545 IAGLU AtCLA1 AT4G16450 AT4G17390 AT4G17560 LIL3:1 AT4G17740 AT4G18100 ATSS4 CH-42 RPL16B AT4G18970 AK-HSDH MORF1 ATRAB8D AT4G20430 ATRP1 PSBQ ATML1 AKT2 PGR5-LIKE AT4G23740 3xHMG-box2 CRR31 AtHsp90-7 cpHsc70-1 AT4G24350 CER2 PGI AT4G24750 ATRBP31 AT4G24820 AT4G24830 AT4G24930 ACP4 CHLM MSRA4 ACYB-2 B1 AT4G26370 AtFBA5 MAP65-2 AR192 AT4G27090 PORB NARA5 AT4G28080 AT4G28360 PSB28 PSAE-1 AT4G28780 emb2726 PFK1 AT4G29360 AT4G29520 AT4G30020 AT4G30330 AT4G30620 scpl29 AT4G30825 FAD6 RPS6 AtENODL15 PGR3 AT4G31985 PDE334 AT4G32340 AtGLDP1 AT4G33500 KUP5 ATBCA5 SEP1 ALDH3 ATCAP1 BLH6 SSR16 AT4G34730 MRL1 AT4G34950 CAT2 HCF244 XCP1 LTO1 AT4G35880 ALDH3F1 AT4G36390 AT4G36530 BEE2 MAP1D XTH7 SHM1 pde191 ATROPGEF1 ATPRP4 AtFBA2 AT4G39040 ATCAD9 PLAT1 AT4G39970 ATPDX1 LHCB4.1 AT5G01590 STN8 AT5G02160 AT5G02450 AT-HSC70-1 AT5G02870 AT5G02960 ATP58IPK ADK2 AT5G03850 54CP GYRB2 FD-GOGAT BTR1 KCS19 AT5G05200 ATEIF2-A2 AtFAD8 ATEGY2 CYC1BAT 2-Cys WCRKC1 AT5G07020 AT5G07030 EMS1 ATRPA70B AT5G08050 scpl35 HEMC FTRA2 AT5G09510 AtPPa6 PMDH2 AT5G09700 AGP4 PAS2 EMP1 AT5G10920 OCP3 PPD5 AT5G11480 SSP5 TUB6 DiT1 ATGSL12 AK EMB3136 ABAR SVR3 ATIMD1 EMB3137 BETA AT5G14910 GASA4 ATMIXTA BCCP2 AT5G16130 AT5G16240 ATF2 DHAR3 ENH1 AT5G17670 EMB1241 ATCBR PSRP6 ATCIMS ATOBGC PCB2 EMB3013 STT3A AtRbcX2 ATIPT9 AT5G20290 ATGER3 ATCPN21 CRR42 AT5G22340 AT5G22440 EMB1030 HCF136 AT5G23650 TUB8 DCR SQE5 ATSS1 APRR5 AT5G24490 AT5G25100 EBF2 AT5G25590 BGLU37 AtTGG1 BIP1 ARRPS1 AT5G33370 AT5G35170 AMOS1 CAC2 ATGSL1 G6PD1 AT5G36160 ATPRFB AT5G37010 RBCS3B RBCS2B RBCS1B AT5G38510 AT5G38520 APE1 CRR7 UDG4 OLI7 GPDHp ATPHB3 RPL27 RPS10B BIP FTSH5 AT5G42720 AT5G42740 RD21B NDH18 AGO10 AT5G44520 CLPP4 AT5G45670 CHL AT5G45950 APE2 KAS1 AT5G46420 BSK2 AT5G46580 TET1 LIL3:2 AT5G47190 AT5G47210 PME5 NF-YB2 AT5G48360 FKBP15-2 LPA66 EMB2812 OVA2 DDM2 cpHsc70-2 CPI1 CAA33 AT5G51110 DYAD AT5G51560 ATMAP65-3 At-NEET ATSBT1.3 ATPGMP AT5G52650 AT5G52780 AT5G52960 AT5G52970 AT5G53150 FTSH11 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G54750 THI1 AT5G55220 ATFTSZ1-1 AT5G55520 CRR21 AtHsp90-3 AtHsp90.2 CSN6A AT5G56670 AT5G56710 AT5G56850 GATA21 AT5G56890 LUT2 NdhN AT5G58330 AtcPT4 ftsh9 ATUCP2 AT5G59850 HTB4 AT5G60390 ATPDX2 AT5G61170 EMB2728 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ATCNX1 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. ALDH12A1 AT5G62710 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. GSA1 SHA1 AtBGAL10 CHR24 PSAN ATERS DCT JK218 EMB3144 AT5G65220 KAC2 ATLFNR1 AT5G66230 AT5G66470 GAMMA AT5G66530 MSP-1 ATDDM1 ABA1 RLK PSBA MATK RPS16 RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 RPS14 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBE ORF31 PETG PSAJ RPL33 RPS18 RPL20 CLPP1 PSBB PSBT PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 NDHF RPL32 YCF5 NDHD PSAC NDHE NDHG NDHI NDHA RPS15 ribosomal protein S3
GO:0043436
oxoacid metabolic process		BP6.154e-111AT1G01080 CYP86A4 ATGPAT4 AT1G02150 emb2386 ATCPO-I POR AT1G04420 emb2394 ATCTL1 ADS1 OE23 EMB2784 PSAO ALB-1V ABC1 AVDE1 CJD1 AT1G09130 AT1G09310 CRB ATATP-PRT2 ATFD1 MORF9 CLPP6 AT1G11860 AT1G12000 AT1G12230 AT1G12800 GAPA-2 MAP1B Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14270 AT1G14345 CP24 AtHBP1 FUG1 ATARCA AT1G18660 LHCA2*1 ATLFNR2 DRT112 AT1G21680 AOAT1 AOR APT1 ATPEX7 PSAK AT1G30580 ATIMD3 PSAF CXC750 ATROPGEF14 ACBP PRK AT1G32470 FdC2 PRPL11 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 GATB AT1G49380 GDC1 AT1G51110 PSAH-2 ABA2 mMDH1 AtFAP3 ACP2 AtTLP18.3 AGP21 AT1G55360 PSAG AT1G56190 AT1G60000 LHCA3 ACO2 AT1G62780 BDG1 AT1G65230 ABA4 ATKCR1 PSBY ATHPR1 AT1G68260 PSRP3/1 EDA17 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NRP1 emb2184 ATGSTU20 PSBR ATKS PGK ATIMD2 WIN1 XERICO ENR1 ABH1 AT2G17033 AT2G20270 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 SCPL8 AT2G24020 AT2G24060 AtGLDP2 BASS2 AT2G27680 PY AtFAD3 ATFC-II ATGSTF7 PRPL28 EDA3 GDCH AT2G35410 GAMMA-TIP Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 CAC3 PnsL1 RCA ATKT2 AT2G40660 AT2G42130 AT2G42220 AT2G43030 AT2G43090 BIO2 AT2G43560 MTHFR2 CHL-CPN10 AT2G44920 CPFTSY ATPMM ATHH2 CYP86A8 CER8 ATPDI11 PHR2 DEG2 ATBCA1 EMB2768 ATF1 PDE326 EMB3119 Encodes a defensin-like (DEFL) family protein. PTAC13 ADK1 AT3G09860 OMR1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 ATPME3 ATHM4 AT3G15520 ADS3 MFP1 NDF4 AT3G16370 AAE7 RFC3 EMB1865 AT3G18940 CBB1 PKP-ALPHA AT3G23700 ATSAHH2 AT3G23940 HCF101 PLSP1 AT3G25805 LTA2 ATPRX GAMMA-TIP2 GAPA CCB1 ATMDAR4 LTPG2 RPL9 PTAC16 ATNOA1 AT3G47650 EDD AHAS GSA2 ATBCAT-3 OEC33 ATG4 PSRP2 CP33 FTSZ2-2 AtPIP2;1 AT3G53580 AT3G54210 AT3G54400 ATDFD SBPASE ACSF AT3G58140 AT3G58610 AT3G59780 MTHFR1 AT3G60750 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 TROL AT4G01310 GLB1 AT4G02530 PSAD-1 EMB3129 PETC ATPC1 APX4 ATPD AT4G10300 LHCB5 AT4G13840 SHM4 FdC1 CYP97B3 IAGLU AtCLA1 AT4G17560 LIL3:1 CH-42 AK-HSDH ATRAB8D ATRP1 AtHsp90-7 CER2 PGI AT4G24750 ATRBP31 AT4G24820 AT4G24830 AT4G24930 ACP4 CHLM MSRA4 ACYB-2 B1 AT4G26370 AtFBA5 PORB NARA5 AT4G28080 PSB28 PSAE-1 emb2726 PFK1 AT4G30020 AT4G30620 FAD6 PGR3 PDE334 AtGLDP1 KUP5 ATBCA5 SEP1 MRL1 AT4G34950 HCF244 LTO1 AT4G36390 XTH7 SHM1 ATPRP4 AtFBA2 AT4G39040 PLAT1 AT4G39970 ATPDX1 AT-HSC70-1 54CP FD-GOGAT KCS19 AtFAD8 ATEGY2 2-Cys HEMC FTRA2 AtPPa6 PMDH2 PAS2 AT5G10920 PPD5 TUB6 DiT1 AK ATIMD1 EMB3137 BETA AT5G14910 GASA4 BCCP2 AT5G16240 ATCIMS PCB2 ATCPN21 AT5G22340 EMB1030 BGLU37 AtTGG1 ARRPS1 CAC2 ATGSL1 G6PD1 AT5G36160 AT5G38520 UDG4 OLI7 FTSH5 AT5G42740 NDH18 AT5G44520 CLPP4 CHL AT5G45950 APE2 KAS1 AT5G46580 TET1 LIL3:2 OVA2 AT5G51110 ATPGMP AT5G52960 AT5G52970 FTSH11 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 AT5G58330 HTB4 ALDH12A1 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. GSA1 PSAN ATERS DCT ATLFNR1 AT5G66470 MSP-1 ABA1 RPS14 ACCD NDHD NDHE
GO:0006082
organic acid metabolic process		BP1.201e-110AT1G01080 CYP86A4 ATGPAT4 AT1G02150 emb2386 ATCPO-I POR AT1G04420 emb2394 ATCTL1 ADS1 OE23 EMB2784 PSAO ALB-1V ABC1 AVDE1 CJD1 AT1G09130 AT1G09310 CRB ATATP-PRT2 ATFD1 MORF9 CLPP6 AT1G11860 AT1G12000 AT1G12230 AT1G12800 GAPA-2 MAP1B Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14270 AT1G14345 CP24 AtHBP1 FUG1 ATARCA AT1G18660 LHCA2*1 ATLFNR2 DRT112 AT1G21680 AOAT1 AOR APT1 ATPEX7 PSAK AT1G30580 ATIMD3 PSAF CXC750 ATROPGEF14 ACBP PRK AT1G32470 FdC2 PRPL11 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 GATB AT1G49380 GDC1 AT1G51110 PSAH-2 ABA2 mMDH1 AtFAP3 ACP2 AtTLP18.3 AGP21 AT1G55360 PSAG AT1G56190 AT1G60000 LHCA3 ACO2 AT1G62780 BDG1 AT1G65230 ABA4 ATKCR1 PSBY ATHPR1 AT1G68260 PSRP3/1 EDA17 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NRP1 emb2184 ATGSTU20 PSBR ATKS PGK ATIMD2 WIN1 XERICO ENR1 ABH1 AT2G17033 AT2G20270 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 SCPL8 AT2G24020 AT2G24060 AtGLDP2 BASS2 AT2G27680 PY AtFAD3 ATFC-II ATGSTF7 PRPL28 EDA3 GDCH AT2G35410 GAMMA-TIP Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 CAC3 PnsL1 RCA ATKT2 AT2G40660 AT2G42130 AT2G42220 AT2G43030 AT2G43090 BIO2 AT2G43560 MTHFR2 CHL-CPN10 AT2G44920 CPFTSY ATPMM ATHH2 CYP86A8 CER8 ATPDI11 PHR2 DEG2 ATBCA1 EMB2768 ATF1 PDE326 EMB3119 Encodes a defensin-like (DEFL) family protein. PTAC13 ADK1 AT3G09860 OMR1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 ATPME3 ATHM4 AT3G15520 ADS3 MFP1 NDF4 AT3G16370 AAE7 RFC3 EMB1865 AT3G18940 CBB1 PKP-ALPHA AT3G23700 ATSAHH2 AT3G23940 HCF101 PLSP1 AT3G25805 LTA2 ATPRX GAMMA-TIP2 GAPA CCB1 ATMDAR4 LTPG2 RPL9 PTAC16 ATNOA1 AT3G47650 EDD AHAS GSA2 ATBCAT-3 OEC33 ATG4 PSRP2 CP33 FTSZ2-2 AtPIP2;1 AT3G53580 AT3G54210 AT3G54400 ATDFD SBPASE ACSF AT3G58140 AT3G58610 AT3G59780 MTHFR1 AT3G60750 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 TROL AT4G01310 GLB1 AT4G02530 PSAD-1 EMB3129 PETC ATPC1 APX4 ATPD AT4G10300 LHCB5 AT4G13840 SHM4 FdC1 CYP97B3 IAGLU AtCLA1 AT4G17560 LIL3:1 CH-42 AK-HSDH ATRAB8D ATRP1 AtHsp90-7 CER2 PGI AT4G24750 ATRBP31 AT4G24820 AT4G24830 AT4G24930 ACP4 CHLM MSRA4 ACYB-2 B1 AT4G26370 AtFBA5 PORB NARA5 AT4G28080 PSB28 PSAE-1 emb2726 PFK1 AT4G30020 AT4G30620 FAD6 PGR3 PDE334 AtGLDP1 KUP5 ATBCA5 SEP1 MRL1 AT4G34950 HCF244 LTO1 AT4G36390 XTH7 SHM1 ATPRP4 AtFBA2 AT4G39040 PLAT1 AT4G39970 ATPDX1 AT-HSC70-1 54CP FD-GOGAT KCS19 AtFAD8 ATEGY2 2-Cys HEMC FTRA2 AtPPa6 PMDH2 PAS2 AT5G10920 PPD5 TUB6 DiT1 AK ATIMD1 EMB3137 BETA AT5G14910 GASA4 BCCP2 AT5G16240 ATCIMS PCB2 ATCPN21 AT5G22340 EMB1030 BGLU37 AtTGG1 ARRPS1 CAC2 ATGSL1 G6PD1 AT5G36160 AT5G38520 UDG4 OLI7 FTSH5 AT5G42740 NDH18 AT5G44520 CLPP4 CHL AT5G45950 APE2 KAS1 AT5G46580 TET1 LIL3:2 OVA2 AT5G51110 ATPGMP AT5G52960 AT5G52970 FTSH11 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 AT5G58330 HTB4 ALDH12A1 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. GSA1 PSAN ATERS DCT ATLFNR1 AT5G66470 MSP-1 ABA1 RPS14 ACCD NDHD NDHE
GO:0071840
cellular component organization or bioge...		BP4.863e-110AT1G01100 ATGPAT4 AT1G02150 IMPA-6 ATCSLD5 emb2386 FZL ATCPO-I PSB27 POR ATHM1 AtTPX2 TOR2 atTIC20 emb2394 ATCTL1 RHON1 OE23 AT1G06760 ATTIC110 HTB1 AT1G07820 PSAO ABC1 AVDE1 CRB ARR4 MORF9 CLPP6 AT1G11860 AT1G12000 AT1G12800 GAPA-2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14270 AT1G14345 ATWHY1 ATMAP70-4 CENP-C CP24 NDF1 HCF173 FUG1 ATARCA ATLP-1 AT1G18360 ATNACK1 LHCA2*1 ATCLH1 AT1G19740 TUB5 ATLFNR2 ATEXP11 DRT112 AT1G21350 LYM1 ATPIN7 AT-EXP10 AT1G29070 ATPEX7 RWA4 AT1G30690 ATROPGEF14 ACBP PRK AtLrgB AT1G32470 PRPL11 ATPS1 RPL21C GAPB Aty2 AT1G44000 CYCA1;1 CP22 Lhca5 EMB3105 RACK1B AT1G49380 TUA2 UBC20 AUG4 GDC1 HTA10 AT1G51110 AT1G52220 PSAH-2 mMDH1 AIN1 G-H2AX AtTLP18.3 ATSAR1 SVB ATFD2 ACO2 ATSCO1 AT1G62780 AT1G63610 AT1G64510 AT1G65230 PTAC4 RBCS1A PSBY AT1G67870 ATHPR1 BBX14 ATXYL1 PSRP3/1 FLN2 ARC12 AT-EXP1 HEMB1 CMT3 AT1G70200 ATGH9B1 AtCPB AT1G72250 AT1G72480 ATHDG11 NRP1 AT1G74800 PDE343 emb2184 AT1G75460 AtGH9B7 LQY1 TUB1 TAPX PSBR RECA1 ATKS EMB1047 CS17 SKU6 AtHsp90.5 FLA7 AT2G05790 ENR1 AT2G10970 ABH1 OTP51 AT2G16365 AT2G17033 HBI1 SCY1 ATPRMT1A ATCAF1 PSB29 ATPRP2 PDTPI ATSULA AtFBA1 AT2G21530 IAA8 AT2G24060 AtENODL14 ER AT2G26500 AT2G27680 CH-CPN60A AT2G28720 HIS4 AT2G28790 ATEXP6 TUB7 ATPCNA2 KIS PSBW AT2G30620 FTSH2 ARASP DAL AT2G34480 HMR AIR9 EDA3 GDCH AT2G35410 AT2G36350 DML1 RPL24A GAMMA-TIP MAT3 AT2G37400 ATEXP3 AT2G37660 AtAUX1 PSRP4 PDE328 PnsL1 RCA LHCB4.3 ATFER4 ATEXP8 AT2G40660 AT2G42130 ATOEP16-3 AT2G43030 AT2G43090 BIO2 AT2G43560 AT2G44870 AGP8 AT2G45700 PEX11D CPFTSY ATPMM ATHH2 SPA1 PSAP DEG2 ATBCA1 AT3G02640 EMB2768 PDE324 TPR10 EMB3119 AT3G05470 AT3G06700 ATYLMG1-1 AAC1 AT3G08740 DEX1 AT3G09200 PTAC13 AT3G09630 OMR1 GYRA Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 WIP3 Cpn60beta2 ATPME3 PRPS20 ATMT3 ATHM4 MFP1 AT3G16080 PSAH-1 AQP1 AT3G16370 AT3G16780 RFC3 POK1 RLK902 AT3G18060 EMB1270 EMB1865 ATPREP1 CBB1 ATTCP-1 ATTOP6B ATNFU2 PSBTN AT3G22230 NET1A ARLIM15 PKP-ALPHA KINESIN-12B AT3G23700 ATSAHH2 ATTOPII HSP60 ATMSH1 HCF101 ATMSH7 PLSP1 ATL5 AtCHUP1 LTA2 ATPRX GAMMA-TIP2 ORF02 GAPA CCB1 GHS1 AT3G27180 AT3G27360 AT3G43610 LTPG2 RPL9 AtXTH31 AT3G45850 AT3G45930 H2B HTB11 AT3G46320 MAR1 PTAC16 AT3G47070 ATNOA1 AT3G47650 EDD AT3G48200 AT3G48420 PDE312 GSA2 ATBBC1 ATPCA OEC33 AT3G51280 AT3G51290 ATSSL4 AT3G51720 ATG4 AT3G52110 CP33 FTSZ2-2 AtPIP2;1 AT3G53430 AT3G53730 ACT3 HCEF1 FLN1 HTA11 ATGR2 LHCA1 PPL1 ATTSC13 SBPASE AT3G56370 PSRP5 ACSF AT3G58140 CUM2 AT3G60245 AT3G60750 AT3G61870 ATDUF7 AT3G62870 CSP41A AtcpRRF EMB3126 TROL AGY1 GLB1 AT4G02530 PSAD-1 EMB3129 BSM PETC ATPC1 ATK5 APX4 ATPD LHCB5 AT4G11175 PSAL AtENODL19 EDA38 AT4G14330 FdC1 AO1 TUA6 AT4G15830 AT4G16450 AT4G17390 AT4G17560 LIL3:1 AT4G18100 ATSS4 CH-42 AT4G19410 PSBQ ATML1 PGR5-LIKE 3xHMG-box2 AtHsp90-7 cpHsc70-1 CER2 PGI AT4G24750 ATRBP31 AT4G24820 ACP4 CHLM ACYB-2 AT4G26370 MAP65-2 AR192 AT4G27090 ATPHOS34 NARA5 TET7 PSB28 GrxC5 PSAE-1 emb2726 AT4G29360 AT4G30020 ATCSLC05 RPS6 AtENODL15 PGR3 PDE334 AT4G32530 AtGLDP1 ATPME44 SEP1 ATCAP1 SSR16 AT4G34730 MRL1 HCF244 XCP1 LTO1 AT4G36390 NDH-M pde191 ATROPGEF1 AtFBA2 AT4G39040 LHCB4.1 AT5G01590 OHP AT5G02870 AT5G03850 54CP GYRB2 FD-GOGAT ATEGY2 2-Cys AT5G07020 ATRPA70B AT5G08050 HEMC AtPPa6 PMDH2 AT5G10400 AGP4 KAC1 PAS2 PPD5 AT5G11480 TUB6 DiT1 ATGSL12 EMB3136 AT5G13770 EMB3137 BETA ATMIXTA AT5G16130 DHAR3 ENH1 ATOBGC PCB2 EMB3013 STT3A TUA3 AT5G20290 ATCPN21 CRR42 AT5G22340 AT5G22440 emb1211 H2B HCF136 TUB8 DCR AtENODL13 AT5G25590 BIP1 ARRPS1 AMOS1 CAC2 ATGSL1 ATPRFB AT5G37010 RBCS3B AT5G38520 APE1 CRR7 AT5G39410 OLI7 EMB139 ATPHB3 BIP ABIL4 RD21B NDH18 AGO10 ATTOM22-V AtCEST CLPP4 KAS1 AT5G46420 AT5G46580 TET1 AT5G47190 PME5 AT5G48360 AT5G48900 LPA66 OVA2 DDM2 CPI1 CAA33 AT5G51110 DYAD ATMAP65-3 ATPGMP HCF106 AT5G52650 AT5G52780 AT5G52960 AT5G52970 PDV1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 ATFTSZ1-1 AT5G55520 CSN6A AT5G56710 NdhN AT5G58330 AT5G59690 AT5G59850 HTA6 HTB4 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. TUB3 SHA1 ATERS JK218 EMB3144 AT5G65220 AT5G65360 KAC2 ATLFNR1 AT5G66470 GAMMA MSP-1 ATDDM1 PSBA PSBK PSBI ATPA ATPH PSBD PSBC YCF3 NDHJ NDHC YCF4 PETA PSBL PETG RPS18 PSBB PSBH PETB PETD YCF5 NDHI NDHA
GO:0008152
metabolic process		BP7.774e-110AT1G01080 AT1G01100 AT1G01320 CYP86A4 ATGPAT4 ATSBT1.1 AT1G02150 CER1 IMPA-6 ATCSLD5 emb2386 PSAD-2 FZL ATCPO-I PSB27 POR ATHM1 AtTPX2 AtSDD1 RPS15 AT1G04420 PDLP2 AT1G04800 TOR2 atTIC20 ATPDI10 emb2394 ATHEX3 ATCTL1 ADS1 ORA59 RHON1 AT1G06360 OE23 EMB2784 AT1G07440 RPS15A AT1G08360 PSAO ALB-1V ABC1 AVDE1 ACHT4 CJD1 AT1G09130 AtCRT1b AT1G09310 CRB AT1G09590 AT1G09690 AT1G09750 ATATP-PRT2 ARR4 AT1G10640 Z-ISO ATFD1 MORF9 CYP77B1 CLPP6 AT1G11860 AT1G12000 AT1G12230 AT1G12460 ATCCS AT1G12800 ICE2 GAPA-2 CYP71B2 MAP1B AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 AT1G14270 RPL10 AT1G14345 ATWHY1 CPN10 AT1G15140 ATDEF1 CENP-C CP24 NDF1 HCF173 ACR11 AtHBP1 FUG1 ATARCA ATNACK1 AT1G18540 AT1G18660 LHCA2*1 BES1 ATCLH1 AT1G19740 APS2 AT1G19960 TUB5 ATLFNR2 DRT112 AT1G21350 AT1G21680 AT1G21740 LYM1 ATCOX6B2 AT1G22630 FB ATCYTC-A ATPIN7 RPL27A AOAT1 ATCAF2 AOR MLP423 BBX15 AT1G27120 APT1 AT1G28530 AT1G29070 ATPEX7 AT1G29660 AB180 AB140 PSAK UGT78D1 AT1G30580 AT1G30600 AT1G30690 ATIMD3 PSAF CXC750 ATROPGEF14 AT1G31690 ACBP PRK AT1G32160 AT1G32470 FdC2 PRPL11 PGY2 AT1G33811 ATPS1 EMB3003 ARF20 RPL21C expressed protein localized to the inner membrane of the chloroplast. GAPB ARP1 Aty2 AtcFBP CYCA1;1 CP22 AtBGAL5 Lhca5 mtLPD1 EMB3105 RKL1 GATB RACK1B AT1G49010 AT1G49380 ATPREP2 ATHX UBC20 GDC1 AT1G51110 AT1G52220 PSAH-2 ABA2 AT1G52510 mMDH1 ATMUM4 AtFAP3 AT1G54410 AIN1 AT1G54500 ACP2 G-H2AX AtTLP18.3 AT1G54820 AT1G55140 AGP21 AT1G55360 CPN60B PSAG AT1G56050 AT1G56190 ATSAR1 AtCRT1a AT1G57770 AT1G60000 AT1G60590 ACLA-2 AT1G60890 ATFD2 LHCA3 ACO2 ATSCO1 AT1G62780 AT1G63610 AtGH9C2 AT1G64510 AT1G64650 BDG1 RPOD1 AT1G65230 AT1G66130 GDPDL1 ABA4 RBCS1A ATKCR1 PSBY AT1G67870 ATHPR1 ADO3 AT1G68260 BBX14 ATXYL1 PSRP3/1 FLN2 HEMB1 CMT3 AMY3 AT1G70200 AT1G70600 ATGH9B1 PGM2 AT1G70820 AT1G71500 AT1G71695 AT1G72030 AT1G72250 EDA17 ATHDG11 AT1G73655 BEE3 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NRP1 AT1G74800 PDE343 RPS9 emb2184 AT1G75460 AtGH9B7 LQY1 TUB1 ATCDSP32 TAPX ATGSTU20 SPS1 emb1473 AT1G78995 AT1G79010 PSBR RECA1 ATKS PGK EMB1047 CS17 APT2 ATIMD2 WIN1 ARR14 AHK4 ARPN AT2G03310 WRKY3 SKU6 AtHsp90.5 AT2G04039 AT2G04060 XERICO AT2G04700 FLA7 AT2G05790 ENR1 PSBX AGT ABH1 AGP9 OTP51 AT2G16365 PFU2 AT2G17033 AT2G17972 HBI1 SCY1 SLP3 ATPRMT1A AT2G19870 ATCAF1 PSAE-2 AT2G20270 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21530 AT2G21960 SEP2 IAA8 SCPL13 SCPL8 AT2G24020 AT2G24060 PRPL35 AtTic55 AtENODL14 AtGLDP2 ER AT2G26500 ATHO1 CYCB1;4 BASS2 PGY1 AT2G27680 HDA13 CH-CPN60A CSD2 ACA2 BGAL8 AT2G29290 AT2G29310 TUB7 ATPCNA2 PY AtFAD3 AT2G30150 EMB3147 AT2G30320 ATFC-II PSBW ATGSTF7 FTSH2 AT2G32060 PRORP1 BAM6 ARASP ATCB5-B BGLU33 ATPDI9 ATCOP1 AtGH9B8 AT2G33370 DAL PRPL28 EMB3113 AT2G34480 HMR NF-YA4 EDA3 GTE01 GDCH AT2G35410 scpl26 AT2G35840 AT2G36350 DML1 RPL24A GAMMA-TIP MAT3 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ATRPS5B AT2G37660 AKR4C10 CAC3 AtAUX1 PSRP4 PDE328 PnsL1 RCA AT2G39850 AteIF3f LHCB4.3 ATFER4 AT2G40400 HEME2 ATKT2 AT2G40660 ARR16 CYP98A3 ATCBK3 GPDHC1 AT2G41820 AT2G42130 ATOEP16-3 AT2G42220 AT2G42650 AT2G43030 AT2G43090 BIO2 AT2G43560 COS1 AT2G44120 MTHFR2 CHL-CPN10 AT2G44920 CYP76C1 AT2G45700 CPFTSY ATPMM ATHH2 CYP86A8 ATMPK12 SPA1 PSAP CER8 CP12 ATPDI11 PHR2 DEG2 PnsL3 ATBCA1 AT3G02640 EMB2768 ATF1 PDE326 PDE324 ATLTL1 emb2458 emb2171 TPR10 HEL EMB3119 AT3G04840 RPL18 Encodes a defensin-like (DEFL) family protein. AT3G06700 AT3G07110 ATYLMG1-1 AAC1 AT3G08740 AT3G09200 PTAC13 AT3G09250 AT3G09440 AT3G09630 ADK1 AT3G09860 AT3G10020 OMR1 AtLCY LGO CYP77A6 GYRA LSF2 AT3G11120 AT3G11510 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. AML1 ATHST PGK1 AT3G12930 AT3G13120 Cpn60beta2 ESM1 AT3G14220 ATPME3 GOX2 GOX1 PRPS20 ATMT3 SPA3 ATHM4 AT3G15520 AT3G15570 ADS3 MFP1 AT3G16080 PSAH-1 NDF4 EMB2083 AT3G16370 ATEBP AT3G16780 AAE7 AT3G17070 RFC3 POK1 RLK902 AT3G18060 EMB1270 RACK1C MOS4 EMB1865 AtTic62 AT3G18940 ATPREP1 ATCAD4 CBB1 ATTCP-1 ATTOP6B ATNFU2 PSBTN AT3G22150 AT3G22210 AT3G22230 ATWNK2 NET1A ARLIM15 PKP-ALPHA ATCFM3A AT3G23530 AT3G23700 ATSAHH2 ATTOPII AT3G23940 HSP60 ATMSH1 HCF101 ATMSH7 PLSP1 ERD2B ATFKBP62 ATL5 LAG1 AT3G25660 AtCHUP1 AT3G25805 LTA2 RPL15 ATPRX CYP71B22 GAMMA-TIP2 ORF02 GAPA CCB1 ATTSO2 GHS1 AT3G27180 ATMDAR4 RPL12 RPL12-C ATMES11 AT3G43670 LTPG2 RPL9 AtXTH31 AT3G45030 PTAC16 AT3G47070 AT3G47370 ATNOA1 AT3G47650 EDD AT3G48200 ATBT2 AT3G48420 AT3G48460 PDE312 AHAS GSA2 ATBBC1 ATPCA RDR6 DIN11 ATBCAT-3 AT3G49880 OEC33 AT3G51280 AT3G51290 ATSSL4 ATEBP1 ATG4 PSRP2 CP33 ACA1 FTSZ2-2 AT3G52960 AtPIP2;1 AT3G53430 CP29 AT3G53580 AT3G53740 AT3G53870 HCEF1 FLN1 AT3G54210 AT3G54400 HTA11 ATGR2 AMP1 LHCA1 ATHEX2 PPL1 ATTSC13 ATDFD SBPASE UGP3 AT3G56370 PSRP5 ACSF ATBZIP61 AT3G58140 AT3G58610 AT3G59780 MTHFR1 CUM2 AT3G60245 AT3G60750 LHCA2 AT3G61490 AT3G61870 CYP20-3 AT3G62110 UBQ5 ATDUF7 CP12 BGLU8 AT3G62870 CSP41A OEP6 AtcpRRF APG1 EMB3126 Conceptual translation of this open reading frame gave the sequence of a 229-residue hypothetical protein that contains the same sequence as the mature A. thaliana chloroplast luminal 19-kDa protein linked to a putative signal sequence. AT4G00165 ANTR2 AT4G00810 AT4G00895 TROL AT4G01310 AGY1 GLB1 AtGH9B13 AT4G02530 PSAD-1 EMB3129 AT4G02840 AT4G02850 BSM PETC ATHM2 ATPC1 ATMSRB6 PSBQ ATK5 SAPX APX4 AT4G09520 ATPD ATSPS4F AT4G10300 LHCB5 AT4G11100 AT4G11175 RHA1B CYP706A6 PSAL AT4G12830 AT4G13170 NYC1 AT4G13840 SHM4 AT4G14330 AT4G14480 ATTCX2 FdC1 AO1 TUA6 AT4G15000 CYP97B3 AT4G15545 IAGLU AtCLA1 AT4G16155 AT4G16450 AT4G16980 AT4G17390 AT4G17560 LIL3:1 AT4G17740 AT4G18100 ATSS4 CH-42 RPL16B AT4G18970 AK-HSDH MORF1 ATRAB8D AT4G20430 ATRP1 PSBQ ATML1 AKT2 PGR5-LIKE AT4G23740 3xHMG-box2 CRR31 AtHsp90-7 cpHsc70-1 AT4G24350 CER2 PGI AT4G24750 ATRBP31 AT4G24820 AT4G24830 AT4G24930 ACP4 CHLM ATFSD1 MSRA4 ACYB-2 B1 AT4G26370 AtFBA5 MAP65-2 AR192 AT4G27090 PORB NARA5 AT4G28080 AT4G28360 PSB28 GrxC5 PSAE-1 AT4G28780 emb2726 PFK1 AT4G29360 AT4G29520 AT4G29590 AT4G30020 AT4G30330 AT4G30620 scpl29 AT4G30825 FAD6 RPS6 AtENODL15 PGR3 AT4G31985 PDE334 AT4G32340 AtGLDP1 AT4G33500 KUP5 ATBCA5 SEP1 ALDH3 ATCAP1 BLH6 SSR16 AT4G34730 MRL1 AT4G34950 CAT2 HCF244 XCP1 LTO1 AT4G35880 ALDH3F1 AT4G36390 AT4G36530 BEE2 MAP1D XTH7 NDH-M SHM1 pde191 ATROPGEF1 ATPRP4 AtFBA2 AT4G39040 ATCAD9 CYP96A12 PLAT1 AT4G39970 ATPDX1 LHCB4.1 AT5G01590 STN8 OHP AT5G02160 AT5G02450 AT-HSC70-1 AT5G02870 AT5G02960 ATP58IPK ADK2 AT5G03850 54CP GYRB2 FD-GOGAT BTR1 KCS19 AT5G05200 ATEIF2-A2 AtFAD8 ATEGY2 AT5G06060 CYC1BAT 2-Cys WCRKC1 AT5G07020 AT5G07030 EMS1 ATRPA70B AT5G08050 scpl35 HEMC FTRA2 AT5G09510 AtPPa6 PMDH2 AT5G09700 AGP4 PAS2 EMP1 AT5G10920 OCP3 AT5G11330 PPD5 AT5G11480 SSP5 TUB6 DiT1 ATGSL12 AK EMB3136 ABAR SVR3 ATIMD1 EMB3137 BETA AT5G14910 GASA4 ATMIXTA BCCP2 AT5G16130 AT5G16240 ATF2 DHAR3 ENH1 AT5G17670 EMB1241 ATCBR PSRP6 ATCIMS CSD3 ATOBGC PCB2 EMB3013 STT3A AtRbcX2 ATIPT9 AT5G20290 ATGER3 ATCPN21 CRR42 AT5G22340 AT5G22440 emb1211 EMB1030 HCF136 AT5G23650 TUB8 DCR SQE5 ATSS1 APRR5 AT5G24490 AT5G25100 CYP71B12 EBF2 AT5G25590 BGLU37 AtTGG1 BIP1 ARRPS1 AT5G33370 AT5G35170 AMOS1 CAC2 ATGSL1 G6PD1 AT5G36160 ATPRFB AT5G37010 RBCS3B RBCS2B RBCS1B AT5G38510 AT5G38520 APE1 CRR7 UDG4 AT5G39410 OLI7 GPDHp ATPHB3 RPL27 RPS10B BIP FTSH5 AT5G42720 AT5G42740 RD21B NDH18 AGO10 AT5G44000 AT5G44520 AtCEST CLPP4 AT5G45670 CHL AT5G45950 APE2 KAS1 AT5G46420 BSK2 AT5G46580 TET1 LIL3:2 AT5G47190 AT5G47210 PME5 NF-YB2 AT5G48360 FKBP15-2 LPA66 EMB2812 OVA2 DDM2 ATFRO6 ATFRO7 cpHsc70-2 CPI1 CAA33 AT5G51110 DYAD AT5G51560 ATMAP65-3 At-NEET ATSBT1.3 ATPGMP AT5G52650 AT5G52780 AT5G52960 AT5G52970 AT5G53150 FTSH11 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G54750 THI1 AT5G55220 ATFTSZ1-1 AT5G55520 CRR21 AtHsp90-3 AtHsp90.2 CSN6A AT5G56670 AT5G56710 AT5G56850 GATA21 AT5G56890 LUT2 NdhN AT5G58330 AtcPT4 ftsh9 ATUCP2 AT5G59850 HTB4 AT5G60390 ATPDX2 AT5G61170 EMB2728 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ATCNX1 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. ALDH12A1 AT5G62710 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. emb2746 GSA1 SHA1 AtBGAL10 CHR24 PSAN ATERS DCT JK218 EMB3144 AT5G65220 KAC2 AT5G65840 ACR1 ATLFNR1 AT5G66230 AT5G66470 GAMMA AT5G66530 MSP-1 ATDDM1 ABA1 RLK PSBA MATK RPS16 RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBM PSBD PSBC YCF9 RPS14 PSAB PSAA YCF3 RPS4 NDHJ PSBG NDHC ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBJ PSBL PSBE ORF31 PETG PSAJ RPL33 RPS18 RPL20 CLPP1 PSBB PSBT PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 NDHF RPL32 YCF5 NDHD PSAC NDHE NDHG NDHI NDHA NDHH RPS15 ribosomal protein S3
GO:0044763
single-organism cellular process		BP4.417e-105AT1G01080 CYP86A4 ATGPAT4 ATKEA1 AT1G02150 CER1 IMPA-6 ATCSLD5 emb2386 PSAD-2 FZL ATCPO-I POR ATHM1 AtTPX2 AT1G04420 TOR2 atTIC20 ATPDI10 emb2394 ATCTL1 ADS1 ORA59 RHON1 OE23 ATTIC110 EMB2784 AT1G07440 PSAO ALB-1V ABC1 AVDE1 ACHT4 CJD1 AT1G09130 AT1G09310 CRB ATATP-PRT2 ARR4 Z-ISO ATFD1 MORF9 CLPP6 AT1G11860 AT1G12000 AT1G12230 AT1G12460 ATCCS AT1G12800 ICE2 GAPA-2 MAP1B AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 AT1G14270 AT1G14345 ATWHY1 CENP-C AtAVP1 CP24 NDF1 ACR11 AtHBP1 AT1G17200 FUG1 ATARCA ATLP-1 ATNACK1 AT1G18660 LHCA2*1 BES1 ATCLH1 APS2 TUB5 ATLFNR2 ATEXP11 DRT112 AT1G21350 AT1G21680 LYM1 AT1G22630 ATPIN7 AOAT1 AOR AT-EXP10 AT1G27120 APT1 AT1G28530 ATPEX7 PSAK AT1G30580 ATIMD3 PSAF CXC750 ATROPGEF14 ACBP PRK AtLrgB AT1G32160 AT1G32470 FdC2 PRPL11 ATPS1 RPL21C expressed protein localized to the inner membrane of the chloroplast. GAPB Aty2 AtcFBP CYCA1;1 CP22 AtBGAL5 Lhca5 mtLPD1 EMB3105 RKL1 GATB RACK1B AT1G49380 AT1G49750 TUA2 ATHX UBC20 AUG4 GDC1 AT1G51110 PSAH-2 ABA2 mMDH1 ATMUM4 AtFAP3 AIN1 AT1G54500 ACP2 AtTLP18.3 AGP21 AT1G55360 CPN60B PSAG AT1G56050 AT1G56190 SVB AT1G57770 AT1G60000 AT1G60890 ATFD2 LHCA3 ACO2 ATSCO1 AT1G62780 AT1G64510 BDG1 AT1G65230 PTAC4 AT1G66130 GDPDL1 ABA4 ATKCR1 PSBY AT1G67870 ATHPR1 AT1G68260 BBX14 PSRP3/1 AT1G68780 FLN2 ARC12 AT-EXP1 HEMB1 CMT3 AT1G70200 ATGH9B1 PGM2 AT1G70820 AtCPB AT1G72250 AT1G72480 EDA17 ATHDG11 AT1G73655 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NRP1 GASA6 AT1G74730 AT1G74800 PDE343 emb2184 AT1G75460 AtGH9B7 LQY1 TUB1 ATCDSP32 TAPX ATGSTU20 SPS1 AT1G78995 PSBR RECA1 ATKS PGK CS17 APT2 AtRLP17 AT1G80440 ATIMD2 WIN1 ARR14 AHK4 ARPN ATNRP1 SKU6 AtHsp90.5 ZIP7 XERICO AT2G04700 AT2G05790 ENR1 AT2G10970 AGT ABH1 AtTic21 ATCOR413-PM1 PFU2 AT2G17033 HBI1 SCY1 TXND9 ATPRMT1A PSAE-2 AT2G20270 ATXIG A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI ATSULA AT2G21300 AtFBA1 AT2G21385 AT2G21530 AT2G21960 IAA8 SCPL8 AT2G24020 AT2G24060 PRPL35 AtENODL14 AtGLDP2 ER ATHO1 CYCB1;4 BASS2 ABCG32 AT2G27680 HDA13 CSD2 ACA2 AT2G28790 ATEXP6 TUB7 ATPCNA2 PY AtFAD3 EMB3147 ATFC-II KIS ATGSTF7 FTSH2 GUN1 PRORP1 BAM6 ATGLR3.7 ATCB5-B ATPDI9 ATCOP1 DAL PRPL28 HMR AIR9 NF-YA4 EDA3 GTE01 ATNPSN11 GDCH AT2G35410 AT2G35840 AT2G36350 DML1 GAMMA-TIP MAT3 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ATEXP3 AT2G37660 CAC3 AtAUX1 PSRP4 PDE328 PnsL1 RCA ELF4 ATFER4 AT2G40400 HEME2 ATKT2 ATEXP8 AT2G40660 ARR16 CYP98A3 AT2G41090 AT2G41820 AT2G42130 AT2G42220 AT2G43030 AT2G43090 BIO2 AT2G43560 COS1 MTHFR2 CHL-CPN10 CYCP4;1 AT2G44870 AT2G44920 AGP8 AT2G45700 CPFTSY ATPMM ATHH2 CYP86A8 ATMPK12 SPA1 PSAP CER8 ATPDI11 PHR2 DEG2 PnsL3 ATBCA1 AT3G02640 EMB2768 ATF1 PDE326 PDE324 TPR10 EMB3119 AT3G04840 ATNHX2 AT3G05470 RPL18 Encodes a defensin-like (DEFL) family protein. AT3G07310 ATYLMG1-1 AAC1 DEX1 PTAC13 AT3G09250 AT3G09630 ADK1 AT3G09860 AT3G10020 OMR1 AtLCY LGO GYRA LSF2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST DRT100 PGK1 AT3G12930 AT3G13120 ESM1 ATPME3 PRPS20 ATMT3 ATHM4 AT3G15520 AT3G15570 ADS3 MFP1 AQP1 NDF4 EMB2083 AT3G16370 ATEBP AT3G16780 AAE7 RFC3 POK1 RLK902 AT3G18050 AT3G18060 EMB1270 RACK1C MOS4 EMB1865 AT3G18940 POK2 ATPREP1 ATCAD4 CBB1 ATTCP-1 ATTOP6B AT3G22210 NET1A ARLIM15 PKP-ALPHA KINESIN-12B AT3G23700 ATSAHH2 ATTOPII AT3G23940 ATMSH1 HCF101 ATMSH7 PLSP1 ERD2B ATL5 LAG1 AT3G25660 AtCHUP1 AT3G25805 LTA2 ATPRX CYP71B22 GAMMA-TIP2 ORF02 GAPA CCB1 CCL YSL6 ATTSO2 ATMDAR4 AT3G43610 LTPG2 RPL9 AT3G45850 H2B AT3G46630 MAR1 PTAC16 AT3G47070 ATNOA1 AT3G47650 EDD AT3G48200 ATBT2 AT3G48420 AT3G48460 PDE312 AHAS GSA2 ATPCA RDR6 DIN11 ATBCAT-3 OEC33 AT3G51280 AT3G51290 ATSSL4 AT3G51720 ATEBP1 ATG4 AT3G52110 PSRP2 CP33 ACA1 FTSZ2-2 AtPIP2;1 AT3G53580 HCEF1 FLN1 AT3G54210 AT3G54400 ATGR2 PPL1 ATTSC13 ATDFD SBPASE UGP3 AT3G56160 AT3G56370 PSRP5 ACSF ATBZIP61 AT3G58140 AT3G58610 AT3G59780 MTHFR1 CUM2 AT3G60750 AT3G61870 CYP20-3 ATDUF7 ABCC14 CSP41A OEP6 AtcpRRF APG1 EMB3126 ANTR2 AT4G00895 TROL AT4G01310 AGY1 GLB1 AT4G02530 PSAD-1 EMB3129 AT4G02850 BSM PETC ATHM2 ATPC1 PSBQ ATK5 APX4 ATPD ATSPS4F AT4G10300 LHCB5 AT4G11175 PSAL NYC1 AT4G13840 SHM4 EDA38 AT4G14330 FdC1 TUA6 CYP97B3 AT4G15545 IAGLU AtCLA1 AT4G15830 AT4G16155 DELTA-TIP2 AT4G17390 AT4G17560 LIL3:1 AT4G17740 ATSS4 CH-42 AK-HSDH ATRAB8D AT4G20430 ATRP1 ATML1 AKT2 PGR5-LIKE AT4G23740 3xHMG-box2 CRR31 AtHsp90-7 AT4G24350 CER2 PGI AT4G24750 ATRBP31 AT4G24820 AT4G24830 AT4G24930 ACP4 CHLM ATFSD1 MSRA4 ACYB-2 B1 AT4G26370 AtFBA5 MAP65-2 AR192 ATPDI7 ATPHOS34 PORB NARA5 TET7 AT4G28080 PSB28 GrxC5 PSAE-1 emb2726 PFK1 AT4G29360 AT4G30020 AT4G30620 scpl29 FAD6 AtENODL15 PGR3 PDE334 AT4G32340 AT4G32530 AtGLDP1 AT4G33500 KUP5 ATBCA5 SEP1 ALDH3 ATCAP1 SSR16 AT4G34730 MRL1 AT4G34950 CAT2 PIP2;7 HCF244 XCP1 LTO1 ALDH3F1 AT4G36390 AT4G36530 BEE2 MAP1D XTH7 SHM1 pde191 ATROPGEF1 ATPRP4 AtFBA2 AT4G39040 ATCAD9 PLAT1 AT4G39970 ATPDX1 AT5G01590 AT5G02160 AT-HSC70-1 AT5G02870 ADK2 54CP GYRB2 FD-GOGAT KCS19 AT5G05200 ATEIF2-A2 AtFAD8 ATEGY2 CYC1BAT 2-Cys WCRKC1 AT5G07020 EMS1 ATRPA70B AT5G08050 HEMC FTRA2 AtPPa6 PMDH2 KAC1 PAS2 AT5G10920 OCP3 PPD5 AT5G11480 TUB6 DiT1 ATGSL12 AK EMB3136 ABAR ATIMD1 EMB3137 BETA AT5G14910 GASA4 ATMIXTA BCCP2 AT5G16240 ATF2 DHAR3 ENH1 AT5G17630 AT5G17670 ATCBR ATCIMS CSD3 ATOBGC PCB2 EMB3013 TUA3 ATIPT9 ATGER3 ATCPN21 AT5G22340 AT5G22400 emb1211 EMB1030 CDF1 HCF136 TUB8 DCR SQE5 ATSS1 APRR5 AtENODL13 EBF2 AT5G25420 AT5G25590 BGLU37 AtTGG1 ATIREG3 AT5G27290 BIP1 AT5G28750 ARRPS1 AT5G35170 AMOS1 CAC2 ATGSL1 G6PD1 AT5G36160 ATPRFB AT5G37010 AT5G38520 APE1 CRR7 UDG4 OLI7 EMB139 ATPHB3 BIP ABIL4 FTSH5 AT5G42740 NDH18 AGO10 AT5G44000 AT5G44520 CLPP4 CHL AT5G45950 APE2 KAT1 KAS1 AT5G46420 BSK2 AT5G46580 TET1 LIL3:2 AT5G47190 AT5G47210 PME5 AT5G48360 AT5G48460 DIR1 FKBP15-2 AT5G48900 LPA66 EMB2812 OVA2 DDM2 ATFRO7 CPI1 CAA33 AT5G51110 DYAD AT5G51560 ATMAP65-3 At-NEET ATSBT1.3 ATPGMP HCF106 AT5G52780 AT5G52960 AT5G52970 FTSH11 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G54750 THI1 AT5G55220 ATFTSZ1-1 AT5G55520 CRR21 AtHsp90.2 CSN6A GATA21 LUT2 AT5G57170 NdhN AT5G58330 AtcPT4 HTB4 ATPDX2 AT5G60930 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. ALDH12A1 TUB3 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. emb2746 ATFP3 GSA1 SHA1 CHR24 PSAN ATERS DCT JK218 AT5G64460 CLEL AT5G65220 KAC2 ATLFNR1 AT5G66470 GAMMA MSP-1 ATDDM1 ABA1 RALFL34 RLK PSBA RPS16 ATPA ATPF ATPH ATPI PSBD PSBC RPS14 NDHJ PSBG NDHC ATPE ATPB ACCD PETA PSBE PETG PSBB PETB PETD NDHF YCF5 NDHD PSAC NDHE NDHG NDHI NDHA NDHH YCF1.2
GO:0009058
biosynthetic process		BP3.935e-103AT1G01080 AT1G01100 ATGPAT4 AT1G02150 CER1 IMPA-6 ATCSLD5 emb2386 FZL ATCPO-I POR ATHM1 AtTPX2 RPS15 AT1G04420 PDLP2 AT1G04800 TOR2 emb2394 ATCTL1 ADS1 ORA59 RHON1 OE23 EMB2784 AT1G07440 RPS15A AT1G08360 PSAO ALB-1V ABC1 AVDE1 AT1G09130 AT1G09310 CRB AT1G09590 AT1G09690 ATATP-PRT2 ARR4 Z-ISO ATFD1 MORF9 CLPP6 AT1G11860 AT1G12000 AT1G12230 AT1G12800 ICE2 AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14270 RPL10 AT1G14345 ATWHY1 ATDEF1 CENP-C CP24 NDF1 HCF173 AtHBP1 FUG1 ATARCA AT1G18540 AT1G18660 LHCA2*1 BES1 ATCLH1 AT1G19960 TUB5 ATLFNR2 DRT112 AT1G21740 ATCOX6B2 AT1G22630 FB ATPIN7 RPL27A AOAT1 AOR BBX15 AT1G27120 APT1 AT1G28530 AT1G29070 PSAK UGT78D1 AT1G30580 AT1G30690 ATIMD3 PSAF CXC750 ATROPGEF14 ACBP PRK AT1G32470 FdC2 PRPL11 PGY2 ATPS1 EMB3003 ARF20 RPL21C expressed protein localized to the inner membrane of the chloroplast. GAPB ARP1 Aty2 AtcFBP CYCA1;1 CP22 AtBGAL5 EMB3105 GATB RACK1B AT1G49380 UBC20 GDC1 AT1G51110 PSAH-2 ABA2 mMDH1 ATMUM4 AT1G54410 AIN1 AT1G54500 ACP2 AtTLP18.3 AGP21 AT1G55360 CPN60B PSAG AT1G56050 AT1G56190 ATSAR1 AT1G57770 AT1G60000 ACLA-2 LHCA3 ACO2 ATSCO1 AT1G62780 AT1G64510 AT1G64650 BDG1 RPOD1 AT1G65230 AT1G66130 ABA4 ATKCR1 PSBY AT1G67870 ATHPR1 ADO3 AT1G68260 BBX14 PSRP3/1 FLN2 HEMB1 CMT3 AT1G70600 PGM2 AT1G70820 AT1G72250 ATHDG11 AT1G73655 BEE3 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NRP1 AT1G74800 PDE343 RPS9 emb2184 AT1G75460 AtGH9B7 TUB1 ATGSTU20 SPS1 emb1473 AT1G78995 PSBR RECA1 ATKS CS17 APT2 ATIMD2 WIN1 ARR14 AT2G03310 WRKY3 SKU6 AT2G04700 FLA7 ENR1 AGT ABH1 AGP9 AT2G16365 AT2G17033 HBI1 SCY1 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21530 IAA8 SCPL8 AT2G24060 PRPL35 ER ATHO1 BASS2 PGY1 AT2G27680 HDA13 CH-CPN60A TUB7 ATPCNA2 PY AtFAD3 EMB3147 ATFC-II ATGSTF7 FTSH2 AT2G32060 BAM6 ATCB5-B ATCOP1 AT2G33370 DAL PRPL28 EMB3113 AT2G34480 HMR NF-YA4 EDA3 GTE01 GDCH AT2G35410 AT2G35840 AT2G36350 DML1 RPL24A GAMMA-TIP MAT3 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ATRPS5B AT2G37660 CAC3 AtAUX1 PSRP4 PDE328 PnsL1 RCA AteIF3f ATFER4 AT2G40400 HEME2 ATKT2 AT2G40660 ARR16 CYP98A3 ATCBK3 AT2G42130 ATOEP16-3 AT2G42220 AT2G42650 AT2G43030 AT2G43090 BIO2 AT2G43560 COS1 AT2G44120 CHL-CPN10 AT2G44920 AT2G45700 CPFTSY ATPMM CER8 CP12 ATPDI11 PHR2 DEG2 PnsL3 ATBCA1 EMB2768 ATF1 PDE326 PDE324 emb2171 EMB3119 AT3G04840 RPL18 Encodes a defensin-like (DEFL) family protein. AT3G06700 AT3G07110 ATYLMG1-1 AAC1 AT3G08740 AT3G09200 PTAC13 AT3G09630 ADK1 AT3G09860 OMR1 AtLCY LGO CYP77A6 GYRA LSF2 AT3G11120 AT3G11510 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. AML1 ATHST PGK1 AT3G12930 AT3G13120 ESM1 ATPME3 GOX2 GOX1 PRPS20 ATMT3 ATHM4 AT3G15520 AT3G15570 ADS3 MFP1 AT3G16080 NDF4 EMB2083 AT3G16370 ATEBP AT3G16780 RFC3 POK1 EMB1270 RACK1C EMB1865 ATCAD4 CBB1 ATTCP-1 ATTOP6B ATNFU2 AT3G22210 AT3G22230 PKP-ALPHA AT3G23530 AT3G23700 ATSAHH2 ATTOPII AT3G23940 ATMSH1 HCF101 ATMSH7 PLSP1 ERD2B ATFKBP62 ATL5 LAG1 AT3G25660 AtCHUP1 AT3G25805 LTA2 RPL15 ATPRX GAMMA-TIP2 ORF02 GAPA CCB1 ATTSO2 GHS1 ATMDAR4 RPL12 RPL12-C ATMES11 RPL9 AT3G45030 PTAC16 AT3G47370 ATNOA1 AT3G47650 EDD AT3G48200 ATBT2 AT3G48420 AT3G48460 PDE312 AHAS GSA2 ATBBC1 OEC33 AT3G51280 AT3G51290 ATSSL4 ATEBP1 ATG4 PSRP2 CP33 FTSZ2-2 AtPIP2;1 AT3G53430 AT3G53580 AT3G53740 AT3G53870 HCEF1 FLN1 AT3G54210 AT3G54400 ATTSC13 ATDFD SBPASE UGP3 PSRP5 ACSF ATBZIP61 AT3G58140 AT3G58610 AT3G59780 AT3G60245 AT3G60750 AT3G61870 CYP20-3 UBQ5 ATDUF7 CP12 AT3G62870 CSP41A OEP6 AtcpRRF APG1 EMB3126 AT4G00165 AT4G00810 AT4G00895 TROL AT4G01310 GLB1 AT4G02530 PSAD-1 EMB3129 AT4G02850 BSM PETC ATPC1 PSBQ ATK5 APX4 ATPD ATSPS4F AT4G10300 LHCB5 AT4G11175 AT4G13170 AT4G13840 AT4G14330 ATTCX2 FdC1 TUA6 AT4G15000 CYP97B3 AtCLA1 AT4G16450 AT4G17390 AT4G17560 LIL3:1 AT4G17740 AT4G18100 ATSS4 CH-42 RPL16B AK-HSDH ATRAB8D ATRP1 ATML1 AKT2 PGR5-LIKE AtHsp90-7 CER2 PGI AT4G24750 ATRBP31 AT4G24820 AT4G24830 AT4G24930 ACP4 CHLM ACYB-2 B1 AT4G26370 AtFBA5 MAP65-2 AR192 AT4G27090 PORB NARA5 AT4G28080 AT4G28360 PSB28 GrxC5 PSAE-1 emb2726 AT4G29360 AT4G30020 FAD6 RPS6 PGR3 AT4G31985 PDE334 AT4G32340 AtGLDP1 AT4G33500 KUP5 SEP1 ATCAP1 BLH6 SSR16 AT4G34730 MRL1 AT4G34950 HCF244 XCP1 LTO1 AT4G36390 AT4G36530 BEE2 MAP1D XTH7 SHM1 pde191 ATROPGEF1 ATPRP4 AtFBA2 AT4G39040 ATCAD9 PLAT1 AT4G39970 ATPDX1 AT5G02160 AT5G02450 AT-HSC70-1 AT5G02870 AT5G02960 ADK2 AT5G03850 54CP GYRB2 FD-GOGAT KCS19 AT5G05200 ATEIF2-A2 AtFAD8 ATEGY2 2-Cys AT5G07020 ATRPA70B AT5G08050 HEMC FTRA2 AT5G09510 AtPPa6 PMDH2 AGP4 PAS2 EMP1 AT5G10920 OCP3 PPD5 TUB6 DiT1 ATGSL12 AK EMB3136 ABAR ATIMD1 EMB3137 BETA AT5G14910 GASA4 ATMIXTA BCCP2 AT5G16130 AT5G16240 ATCBR PSRP6 ATCIMS PCB2 ATIPT9 AT5G20290 ATCPN21 AT5G22340 AT5G22440 emb1211 EMB1030 HCF136 AT5G23650 TUB8 DCR SQE5 ATSS1 APRR5 AT5G24490 AT5G25100 AT5G25590 ARRPS1 AT5G35170 AMOS1 CAC2 ATGSL1 G6PD1 AT5G36160 ATPRFB AT5G37010 AT5G38520 APE1 CRR7 UDG4 OLI7 GPDHp RPL27 RPS10B FTSH5 AT5G42740 NDH18 AGO10 AT5G44520 CLPP4 CHL APE2 KAS1 AT5G46420 BSK2 AT5G46580 TET1 AT5G47190 AT5G47210 NF-YB2 EMB2812 OVA2 DDM2 CPI1 AT5G51110 ATMAP65-3 ATPGMP AT5G52650 AT5G52960 AT5G52970 FTSH11 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G54750 THI1 AT5G55220 ATFTSZ1-1 CRR21 CSN6A AT5G56670 AT5G56710 GATA21 LUT2 NdhN AT5G58330 AtcPT4 ATUCP2 AT5G59850 AT5G60390 ATPDX2 AT5G61170 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. GSA1 SHA1 CHR24 PSAN ATERS JK218 AT5G65220 KAC2 ATLFNR1 AT5G66230 AT5G66470 GAMMA MSP-1 ATDDM1 ABA1 PSBA MATK RPS16 RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 RPS14 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBE ORF31 PETG PSAJ RPL33 RPS18 RPL20 CLPP1 PSBB PSBT PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 RPL32 YCF5 NDHD PSAC NDHE NDHG NDHI NDHA RPS15 ribosomal protein S3
GO:0019752
carboxylic acid metabolic process		BP4.105e-103AT1G01080 CYP86A4 ATGPAT4 AT1G02150 emb2386 ATCPO-I POR AT1G04420 emb2394 ATCTL1 ADS1 OE23 EMB2784 PSAO ALB-1V ABC1 AVDE1 CJD1 AT1G09130 AT1G09310 CRB ATATP-PRT2 ATFD1 MORF9 CLPP6 AT1G11860 AT1G12000 AT1G12230 AT1G12800 GAPA-2 MAP1B Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14270 AT1G14345 CP24 FUG1 ATARCA AT1G18660 LHCA2*1 ATLFNR2 DRT112 AT1G21680 AOAT1 AOR APT1 ATPEX7 PSAK AT1G30580 ATIMD3 PSAF CXC750 ATROPGEF14 ACBP PRK AT1G32470 FdC2 PRPL11 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 GATB AT1G49380 GDC1 AT1G51110 PSAH-2 ABA2 mMDH1 AtFAP3 ACP2 AtTLP18.3 AGP21 AT1G55360 PSAG AT1G56190 AT1G60000 LHCA3 ACO2 AT1G62780 BDG1 AT1G65230 ABA4 ATKCR1 PSBY ATHPR1 AT1G68260 PSRP3/1 EDA17 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NRP1 emb2184 ATGSTU20 PSBR ATKS PGK ATIMD2 WIN1 XERICO ENR1 ABH1 AT2G17033 AT2G20270 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 SCPL8 AT2G24020 AT2G24060 AtGLDP2 AT2G27680 PY AtFAD3 ATFC-II ATGSTF7 PRPL28 EDA3 GDCH AT2G35410 GAMMA-TIP Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 CAC3 PnsL1 RCA ATKT2 AT2G40660 AT2G42130 AT2G42220 AT2G43030 AT2G43090 BIO2 AT2G43560 MTHFR2 CHL-CPN10 AT2G44920 CPFTSY ATPMM ATHH2 CYP86A8 CER8 ATPDI11 PHR2 DEG2 ATBCA1 EMB2768 ATF1 PDE326 EMB3119 PTAC13 ADK1 AT3G09860 OMR1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 ATPME3 ATHM4 AT3G15520 ADS3 MFP1 NDF4 AT3G16370 AAE7 RFC3 EMB1865 AT3G18940 CBB1 PKP-ALPHA AT3G23700 ATSAHH2 AT3G23940 HCF101 AT3G25805 LTA2 ATPRX GAMMA-TIP2 GAPA CCB1 LTPG2 RPL9 ATNOA1 AT3G47650 EDD AHAS GSA2 ATBCAT-3 ATG4 PSRP2 CP33 FTSZ2-2 AtPIP2;1 AT3G53580 AT3G54210 AT3G54400 ATDFD SBPASE ACSF AT3G58140 AT3G58610 AT3G59780 MTHFR1 AT3G60750 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 TROL AT4G01310 GLB1 AT4G02530 PSAD-1 EMB3129 PETC ATPC1 APX4 ATPD AT4G10300 LHCB5 SHM4 FdC1 CYP97B3 IAGLU AtCLA1 AT4G17560 LIL3:1 CH-42 AK-HSDH ATRAB8D AtHsp90-7 CER2 PGI AT4G24750 ATRBP31 AT4G24820 AT4G24830 ACP4 CHLM MSRA4 ACYB-2 B1 AT4G26370 AtFBA5 PORB NARA5 AT4G28080 PSB28 PSAE-1 emb2726 PFK1 AT4G30620 FAD6 PGR3 PDE334 AtGLDP1 KUP5 ATBCA5 SEP1 MRL1 HCF244 LTO1 AT4G36390 SHM1 ATPRP4 AtFBA2 AT4G39040 PLAT1 ATPDX1 AT-HSC70-1 54CP FD-GOGAT KCS19 AtFAD8 ATEGY2 2-Cys HEMC FTRA2 AtPPa6 PMDH2 PAS2 AT5G10920 PPD5 TUB6 DiT1 AK ATIMD1 EMB3137 BETA AT5G14910 GASA4 BCCP2 AT5G16240 ATCIMS PCB2 ATCPN21 AT5G22340 EMB1030 ARRPS1 CAC2 ATGSL1 G6PD1 AT5G36160 UDG4 OLI7 AT5G42740 NDH18 AT5G44520 CLPP4 CHL AT5G45950 APE2 KAS1 AT5G46580 TET1 LIL3:2 OVA2 AT5G51110 ATPGMP AT5G52960 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 AT5G58330 HTB4 ALDH12A1 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. GSA1 PSAN ATERS DCT ATLFNR1 AT5G66470 MSP-1 ABA1 RPS14 ACCD NDHE
GO:1901576
organic substance biosynthetic process		BP1.010e-102AT1G01080 AT1G01100 ATGPAT4 AT1G02150 CER1 IMPA-6 ATCSLD5 emb2386 FZL ATCPO-I POR ATHM1 AtTPX2 RPS15 AT1G04420 PDLP2 AT1G04800 TOR2 emb2394 ATCTL1 ADS1 ORA59 RHON1 OE23 EMB2784 AT1G07440 RPS15A AT1G08360 PSAO ALB-1V ABC1 AVDE1 AT1G09130 AT1G09310 CRB AT1G09590 AT1G09690 ATATP-PRT2 ARR4 Z-ISO ATFD1 MORF9 CLPP6 AT1G11860 AT1G12000 AT1G12230 AT1G12800 ICE2 AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14270 RPL10 AT1G14345 ATWHY1 ATDEF1 CENP-C CP24 NDF1 HCF173 AtHBP1 FUG1 ATARCA AT1G18540 AT1G18660 LHCA2*1 BES1 ATCLH1 AT1G19960 TUB5 ATLFNR2 DRT112 AT1G21740 AT1G22630 FB ATPIN7 RPL27A AOAT1 AOR BBX15 AT1G27120 APT1 AT1G28530 AT1G29070 PSAK UGT78D1 AT1G30580 AT1G30690 ATIMD3 PSAF CXC750 ATROPGEF14 ACBP PRK AT1G32470 FdC2 PRPL11 PGY2 ATPS1 EMB3003 ARF20 RPL21C expressed protein localized to the inner membrane of the chloroplast. GAPB ARP1 Aty2 AtcFBP CYCA1;1 CP22 AtBGAL5 EMB3105 GATB RACK1B AT1G49380 UBC20 GDC1 AT1G51110 PSAH-2 ABA2 mMDH1 ATMUM4 AIN1 AT1G54500 ACP2 AtTLP18.3 AGP21 AT1G55360 CPN60B PSAG AT1G56050 AT1G56190 ATSAR1 AT1G57770 AT1G60000 ACLA-2 LHCA3 ACO2 ATSCO1 AT1G62780 AT1G64510 AT1G64650 BDG1 RPOD1 AT1G65230 AT1G66130 ABA4 ATKCR1 PSBY AT1G67870 ATHPR1 ADO3 AT1G68260 BBX14 PSRP3/1 FLN2 HEMB1 CMT3 AT1G70600 PGM2 AT1G70820 AT1G72250 ATHDG11 AT1G73655 BEE3 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NRP1 AT1G74800 PDE343 RPS9 emb2184 AT1G75460 AtGH9B7 TUB1 ATGSTU20 SPS1 emb1473 AT1G78995 PSBR ATKS CS17 APT2 ATIMD2 WIN1 ARR14 AT2G03310 WRKY3 SKU6 AT2G04700 FLA7 ENR1 ABH1 AGP9 AT2G16365 AT2G17033 HBI1 SCY1 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21530 IAA8 SCPL8 AT2G24060 PRPL35 ER ATHO1 BASS2 PGY1 AT2G27680 HDA13 TUB7 ATPCNA2 PY AtFAD3 EMB3147 ATFC-II ATGSTF7 FTSH2 AT2G32060 BAM6 ATCB5-B ATCOP1 AT2G33370 DAL PRPL28 EMB3113 AT2G34480 HMR NF-YA4 EDA3 GTE01 GDCH AT2G35410 AT2G35840 AT2G36350 DML1 RPL24A GAMMA-TIP MAT3 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ATRPS5B AT2G37660 CAC3 AtAUX1 PSRP4 PDE328 PnsL1 RCA AteIF3f AT2G40400 HEME2 ATKT2 AT2G40660 ARR16 CYP98A3 ATCBK3 AT2G42130 AT2G42220 AT2G42650 AT2G43030 AT2G43090 BIO2 AT2G43560 COS1 AT2G44120 CHL-CPN10 AT2G44920 AT2G45700 CPFTSY ATPMM CER8 CP12 ATPDI11 PHR2 DEG2 PnsL3 ATBCA1 EMB2768 ATF1 PDE326 PDE324 emb2171 EMB3119 AT3G04840 RPL18 Encodes a defensin-like (DEFL) family protein. AT3G06700 AT3G07110 ATYLMG1-1 AAC1 AT3G08740 AT3G09200 PTAC13 AT3G09630 ADK1 AT3G09860 OMR1 AtLCY LGO CYP77A6 GYRA LSF2 AT3G11120 AT3G11510 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. AML1 ATHST PGK1 AT3G12930 AT3G13120 ESM1 ATPME3 PRPS20 ATMT3 ATHM4 AT3G15520 AT3G15570 ADS3 MFP1 AT3G16080 NDF4 EMB2083 AT3G16370 ATEBP AT3G16780 RFC3 POK1 EMB1270 RACK1C EMB1865 ATCAD4 CBB1 ATTCP-1 ATTOP6B AT3G22210 AT3G22230 PKP-ALPHA AT3G23530 AT3G23700 ATSAHH2 ATTOPII AT3G23940 ATMSH1 HCF101 ATMSH7 PLSP1 ERD2B ATFKBP62 ATL5 LAG1 AT3G25660 AtCHUP1 AT3G25805 LTA2 RPL15 ATPRX GAMMA-TIP2 ORF02 GAPA CCB1 ATTSO2 GHS1 ATMDAR4 RPL12 RPL12-C ATMES11 RPL9 AT3G45030 PTAC16 AT3G47370 ATNOA1 AT3G47650 EDD AT3G48200 ATBT2 AT3G48420 AT3G48460 PDE312 AHAS GSA2 ATBBC1 OEC33 AT3G51280 AT3G51290 ATSSL4 ATEBP1 ATG4 PSRP2 CP33 FTSZ2-2 AtPIP2;1 AT3G53430 AT3G53580 AT3G53740 AT3G53870 HCEF1 FLN1 AT3G54210 AT3G54400 ATTSC13 ATDFD SBPASE UGP3 PSRP5 ACSF ATBZIP61 AT3G58140 AT3G58610 AT3G59780 AT3G60245 AT3G60750 AT3G61870 CYP20-3 UBQ5 ATDUF7 CP12 AT3G62870 CSP41A OEP6 AtcpRRF APG1 EMB3126 AT4G00165 AT4G00810 AT4G00895 TROL AT4G01310 GLB1 AT4G02530 PSAD-1 EMB3129 BSM PETC ATPC1 ATK5 APX4 ATPD ATSPS4F AT4G10300 LHCB5 AT4G11175 AT4G13170 AT4G13840 AT4G14330 ATTCX2 FdC1 TUA6 AT4G15000 CYP97B3 AtCLA1 AT4G17390 AT4G17560 LIL3:1 AT4G17740 AT4G18100 ATSS4 CH-42 RPL16B AK-HSDH ATRAB8D ATRP1 ATML1 AKT2 PGR5-LIKE AtHsp90-7 CER2 PGI AT4G24750 ATRBP31 AT4G24820 AT4G24830 AT4G24930 ACP4 CHLM ACYB-2 B1 AT4G26370 AtFBA5 MAP65-2 AR192 AT4G27090 PORB NARA5 AT4G28080 AT4G28360 PSB28 PSAE-1 emb2726 AT4G29360 AT4G30020 FAD6 RPS6 PGR3 AT4G31985 PDE334 AT4G32340 AtGLDP1 AT4G33500 KUP5 SEP1 ATCAP1 BLH6 SSR16 AT4G34730 MRL1 AT4G34950 HCF244 XCP1 LTO1 AT4G36390 AT4G36530 BEE2 MAP1D XTH7 SHM1 pde191 ATROPGEF1 ATPRP4 AtFBA2 AT4G39040 ATCAD9 PLAT1 AT4G39970 ATPDX1 AT5G02160 AT5G02450 AT-HSC70-1 AT5G02870 AT5G02960 ADK2 AT5G03850 54CP GYRB2 FD-GOGAT KCS19 AT5G05200 ATEIF2-A2 AtFAD8 ATEGY2 2-Cys AT5G07020 ATRPA70B AT5G08050 HEMC FTRA2 AT5G09510 AtPPa6 PMDH2 AGP4 PAS2 EMP1 AT5G10920 OCP3 PPD5 TUB6 DiT1 ATGSL12 AK EMB3136 ABAR ATIMD1 EMB3137 BETA AT5G14910 GASA4 ATMIXTA BCCP2 AT5G16130 AT5G16240 ATCBR PSRP6 ATCIMS PCB2 ATIPT9 AT5G20290 ATCPN21 AT5G22340 AT5G22440 EMB1030 HCF136 AT5G23650 TUB8 DCR SQE5 ATSS1 APRR5 AT5G24490 AT5G25100 AT5G25590 ARRPS1 AT5G35170 AMOS1 CAC2 ATGSL1 G6PD1 AT5G36160 ATPRFB AT5G37010 AT5G38520 APE1 CRR7 UDG4 OLI7 GPDHp RPL27 RPS10B FTSH5 AT5G42740 NDH18 AGO10 AT5G44520 CLPP4 CHL APE2 KAS1 AT5G46420 BSK2 AT5G46580 TET1 AT5G47190 AT5G47210 NF-YB2 EMB2812 OVA2 DDM2 CPI1 AT5G51110 ATMAP65-3 ATPGMP AT5G52650 AT5G52960 AT5G52970 FTSH11 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G54750 THI1 AT5G55220 ATFTSZ1-1 CRR21 CSN6A AT5G56670 AT5G56710 GATA21 LUT2 NdhN AT5G58330 AtcPT4 AT5G59850 AT5G60390 ATPDX2 AT5G61170 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. GSA1 SHA1 CHR24 PSAN ATERS JK218 AT5G65220 KAC2 ATLFNR1 AT5G66230 AT5G66470 GAMMA MSP-1 ATDDM1 ABA1 PSBA MATK RPS16 RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 RPS14 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBE ORF31 PETG PSAJ RPL33 RPS18 RPL20 CLPP1 PSBB PSBT PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 RPL32 YCF5 NDHD PSAC NDHE NDHG NDHI NDHA RPS15 ribosomal protein S3
GO:0016043
cellular component organization		BP7.431e-99AT1G01100 ATGPAT4 AT1G02150 IMPA-6 ATCSLD5 FZL PSB27 POR ATHM1 AtTPX2 TOR2 atTIC20 emb2394 ATCTL1 RHON1 OE23 AT1G06760 ATTIC110 HTB1 AT1G07820 PSAO ABC1 CRB ARR4 MORF9 CLPP6 AT1G11860 AT1G12000 AT1G12800 GAPA-2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14270 AT1G14345 ATWHY1 ATMAP70-4 CENP-C CP24 NDF1 HCF173 FUG1 ATLP-1 ATNACK1 ATCLH1 AT1G19740 TUB5 ATLFNR2 ATEXP11 DRT112 AT1G21350 LYM1 ATPIN7 AT-EXP10 ATPEX7 AT1G30690 ATROPGEF14 ACBP PRK AtLrgB AT1G32470 PRPL11 ATPS1 RPL21C GAPB Aty2 AT1G44000 CYCA1;1 CP22 Lhca5 EMB3105 RACK1B AT1G49380 TUA2 UBC20 AUG4 GDC1 HTA10 AT1G51110 AT1G52220 PSAH-2 mMDH1 AIN1 G-H2AX AtTLP18.3 ATSAR1 SVB ATFD2 ACO2 ATSCO1 AT1G62780 AT1G63610 AT1G64510 AT1G65230 PTAC4 PSBY AT1G67870 ATHPR1 BBX14 ATXYL1 PSRP3/1 FLN2 ARC12 AT-EXP1 CMT3 AT1G70200 ATGH9B1 AtCPB AT1G72250 AT1G72480 ATHDG11 NRP1 AT1G74800 PDE343 emb2184 AT1G75460 AtGH9B7 LQY1 TUB1 TAPX PSBR RECA1 EMB1047 CS17 SKU6 AtHsp90.5 FLA7 AT2G05790 ENR1 AT2G10970 ABH1 OTP51 AT2G16365 AT2G17033 HBI1 SCY1 ATPRMT1A ATCAF1 PSB29 ATPRP2 PDTPI ATSULA AtFBA1 AT2G21530 IAA8 AT2G24060 AtENODL14 ER AT2G26500 AT2G27680 CH-CPN60A AT2G28720 HIS4 AT2G28790 ATEXP6 TUB7 ATPCNA2 KIS PSBW AT2G30620 FTSH2 ARASP DAL AT2G34480 HMR AIR9 EDA3 GDCH AT2G35410 AT2G36350 DML1 GAMMA-TIP MAT3 AT2G37400 ATEXP3 AT2G37660 AtAUX1 PSRP4 PDE328 PnsL1 RCA ATFER4 ATEXP8 AT2G40660 AT2G42130 ATOEP16-3 AT2G43030 AT2G43090 BIO2 AT2G43560 AT2G44870 AGP8 AT2G45700 PEX11D CPFTSY ATPMM ATHH2 SPA1 PSAP DEG2 ATBCA1 AT3G02640 EMB2768 PDE324 TPR10 EMB3119 AT3G05470 ATYLMG1-1 AAC1 AT3G08740 DEX1 AT3G09200 PTAC13 AT3G09630 OMR1 GYRA Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 WIP3 Cpn60beta2 ATPME3 ATMT3 ATHM4 MFP1 PSAH-1 AQP1 AT3G16370 AT3G16780 POK1 RLK902 AT3G18060 EMB1270 EMB1865 ATPREP1 CBB1 ATTCP-1 ATTOP6B ATNFU2 PSBTN NET1A ARLIM15 KINESIN-12B AT3G23700 ATSAHH2 ATTOPII HSP60 ATMSH1 HCF101 ATMSH7 PLSP1 AtCHUP1 LTA2 GAMMA-TIP2 ORF02 GAPA CCB1 AT3G27360 AT3G43610 AT3G45850 AT3G45930 H2B HTB11 AT3G46320 MAR1 PTAC16 AT3G47070 ATNOA1 AT3G47650 EDD AT3G48200 AT3G48420 PDE312 ATPCA OEC33 AT3G51280 AT3G51290 ATSSL4 AT3G51720 ATG4 AT3G52110 CP33 FTSZ2-2 AtPIP2;1 AT3G53730 ACT3 HCEF1 FLN1 HTA11 ATGR2 PPL1 ATTSC13 SBPASE AT3G56370 PSRP5 ACSF AT3G58140 CUM2 AT3G60750 AT3G61870 ATDUF7 CSP41A AtcpRRF EMB3126 TROL AGY1 GLB1 AT4G02530 PSAD-1 EMB3129 BSM PETC ATPC1 ATK5 ATPD AT4G11175 PSAL AtENODL19 EDA38 AT4G14330 TUA6 AT4G15830 AT4G16450 AT4G17390 LIL3:1 ATSS4 AT4G19410 PSBQ ATML1 PGR5-LIKE 3xHMG-box2 AtHsp90-7 cpHsc70-1 PGI AT4G24750 ATRBP31 AT4G24820 ACP4 ACYB-2 AT4G26370 MAP65-2 AR192 ATPHOS34 NARA5 TET7 PSB28 GrxC5 PSAE-1 emb2726 AT4G29360 AT4G30020 AtENODL15 PGR3 PDE334 AT4G32530 AtGLDP1 ATPME44 SEP1 ATCAP1 SSR16 AT4G34730 MRL1 HCF244 LTO1 AT4G36390 NDH-M pde191 ATROPGEF1 AtFBA2 AT4G39040 AT5G01590 OHP AT5G02870 54CP GYRB2 FD-GOGAT ATEGY2 2-Cys AT5G07020 ATRPA70B AT5G08050 AtPPa6 PMDH2 AT5G10400 AGP4 KAC1 PAS2 PPD5 AT5G11480 TUB6 ATGSL12 EMB3136 AT5G13770 BETA ATMIXTA DHAR3 ENH1 ATOBGC EMB3013 TUA3 ATCPN21 CRR42 AT5G22340 emb1211 H2B HCF136 TUB8 DCR AtENODL13 AT5G25590 BIP1 ARRPS1 AMOS1 CAC2 ATGSL1 ATPRFB AT5G37010 AT5G38520 APE1 CRR7 AT5G39410 EMB139 ATPHB3 BIP ABIL4 RD21B NDH18 AGO10 ATTOM22-V AtCEST CLPP4 KAS1 AT5G46580 TET1 AT5G47190 PME5 AT5G48360 AT5G48900 LPA66 OVA2 DDM2 CPI1 CAA33 AT5G51110 DYAD ATMAP65-3 ATPGMP HCF106 AT5G52650 AT5G52780 AT5G52960 AT5G52970 PDV1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 ATFTSZ1-1 AT5G55520 CSN6A NdhN AT5G58330 AT5G59690 AT5G59850 HTA6 HTB4 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. TUB3 SHA1 ATERS JK218 EMB3144 AT5G65220 AT5G65360 KAC2 ATLFNR1 AT5G66470 GAMMA MSP-1 ATDDM1 PSBA PSBK PSBI ATPH PSBD PSBC YCF3 NDHJ NDHC YCF4 PETA PSBL PETG RPS18 PSBB PSBH PETD YCF5 NDHI NDHA
GO:0044238
primary metabolic process		BP1.087e-96AT1G01080 AT1G01100 AT1G01320 CYP86A4 ATGPAT4 ATSBT1.1 AT1G02150 IMPA-6 ATCSLD5 emb2386 PSAD-2 FZL ATCPO-I PSB27 POR ATHM1 AtTPX2 AtSDD1 RPS15 AT1G04420 PDLP2 AT1G04800 TOR2 ATPDI10 emb2394 ATHEX3 ATCTL1 ADS1 ORA59 RHON1 AT1G06360 OE23 EMB2784 AT1G07440 RPS15A AT1G08360 PSAO ALB-1V ABC1 AVDE1 CJD1 AT1G09130 AtCRT1b AT1G09310 CRB AT1G09590 AT1G09690 AT1G09750 ATATP-PRT2 ARR4 AT1G10640 Z-ISO ATFD1 MORF9 CLPP6 AT1G11860 AT1G12000 AT1G12230 AT1G12460 AT1G12800 ICE2 GAPA-2 MAP1B AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 AT1G14270 RPL10 AT1G14345 ATWHY1 CPN10 ATDEF1 CENP-C CP24 NDF1 HCF173 FUG1 ATARCA ATNACK1 AT1G18540 AT1G18660 LHCA2*1 BES1 ATCLH1 AT1G19740 TUB5 ATLFNR2 DRT112 AT1G21740 LYM1 AT1G22630 FB ATCYTC-A ATPIN7 RPL27A AOAT1 ATCAF2 AOR MLP423 BBX15 AT1G27120 APT1 AT1G28530 AT1G29070 ATPEX7 AT1G29660 PSAK AT1G30580 AT1G30600 AT1G30690 ATIMD3 PSAF ATROPGEF14 ACBP PRK AT1G32160 AT1G32470 FdC2 PRPL11 PGY2 AT1G33811 ATPS1 EMB3003 ARF20 RPL21C expressed protein localized to the inner membrane of the chloroplast. GAPB ARP1 Aty2 AtcFBP CYCA1;1 CP22 AtBGAL5 Lhca5 EMB3105 RKL1 GATB RACK1B AT1G49010 AT1G49380 ATPREP2 UBC20 GDC1 AT1G51110 AT1G52220 PSAH-2 ABA2 AT1G52510 mMDH1 ATMUM4 AtFAP3 AIN1 AT1G54500 ACP2 G-H2AX AtTLP18.3 AT1G54820 AT1G55140 AGP21 AT1G55360 CPN60B PSAG AT1G56190 ATSAR1 AtCRT1a AT1G57770 AT1G60000 AT1G60590 AT1G60890 LHCA3 ACO2 ATSCO1 AT1G62780 AtGH9C2 AT1G64510 AT1G64650 BDG1 RPOD1 AT1G65230 GDPDL1 ABA4 ATKCR1 PSBY AT1G67870 ATHPR1 ADO3 AT1G68260 BBX14 ATXYL1 PSRP3/1 FLN2 HEMB1 CMT3 AMY3 AT1G70200 AT1G70600 ATGH9B1 PGM2 AT1G70820 AT1G72250 EDA17 ATHDG11 AT1G73655 BEE3 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NRP1 AT1G74800 PDE343 RPS9 emb2184 AT1G75460 AtGH9B7 LQY1 TUB1 ATGSTU20 emb1473 AT1G78995 PSBR RECA1 ATKS PGK EMB1047 CS17 APT2 ATIMD2 WIN1 ARR14 AHK4 ARPN WRKY3 SKU6 AtHsp90.5 AT2G04060 XERICO AT2G04700 FLA7 AT2G05790 ENR1 ABH1 AGP9 OTP51 AT2G16365 PFU2 AT2G17033 AT2G17972 HBI1 SCY1 SLP3 ATPRMT1A AT2G19870 ATCAF1 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21530 AT2G21960 IAA8 SCPL13 SCPL8 AT2G24060 PRPL35 AtENODL14 AtGLDP2 ER AT2G26500 ATHO1 CYCB1;4 BASS2 PGY1 AT2G27680 HDA13 CH-CPN60A BGAL8 TUB7 ATPCNA2 PY AtFAD3 AT2G30320 ATFC-II PSBW ATGSTF7 FTSH2 AT2G32060 PRORP1 BAM6 ARASP ATCB5-B BGLU33 ATPDI9 ATCOP1 AtGH9B8 AT2G33370 DAL PRPL28 EMB3113 AT2G34480 HMR NF-YA4 EDA3 GTE01 GDCH AT2G35410 scpl26 AT2G35840 AT2G36350 DML1 RPL24A GAMMA-TIP MAT3 ATRPS5B AT2G37660 CAC3 AtAUX1 PSRP4 PDE328 PnsL1 AT2G39850 AteIF3f LHCB4.3 ATKT2 AT2G40660 ARR16 CYP98A3 ATCBK3 GPDHC1 AT2G41820 AT2G42130 ATOEP16-3 AT2G42220 AT2G42650 AT2G43030 AT2G43090 BIO2 AT2G43560 COS1 AT2G44120 MTHFR2 CHL-CPN10 AT2G44920 AT2G45700 CPFTSY ATPMM ATHH2 CYP86A8 ATMPK12 SPA1 PSAP CER8 CP12 ATPDI11 PHR2 DEG2 PnsL3 ATBCA1 AT3G02640 EMB2768 ATF1 PDE326 PDE324 ATLTL1 emb2458 emb2171 TPR10 EMB3119 AT3G04840 RPL18 AT3G06700 AT3G07110 ATYLMG1-1 AAC1 AT3G08740 AT3G09200 PTAC13 AT3G09250 AT3G09440 AT3G09630 ADK1 AT3G09860 OMR1 AtLCY LGO GYRA LSF2 AT3G11120 AT3G11510 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. AML1 ATHST PGK1 AT3G12930 AT3G13120 Cpn60beta2 ESM1 AT3G14220 ATPME3 PRPS20 ATMT3 SPA3 ATHM4 AT3G15520 AT3G15570 ADS3 MFP1 AT3G16080 PSAH-1 NDF4 EMB2083 AT3G16370 ATEBP AT3G16780 AAE7 RFC3 POK1 RLK902 AT3G18060 EMB1270 RACK1C MOS4 EMB1865 AtTic62 AT3G18940 ATPREP1 CBB1 ATTCP-1 ATTOP6B PSBTN AT3G22150 AT3G22210 AT3G22230 ATWNK2 ARLIM15 PKP-ALPHA ATCFM3A AT3G23530 AT3G23700 ATSAHH2 ATTOPII AT3G23940 HSP60 ATMSH1 HCF101 ATMSH7 PLSP1 ERD2B ATFKBP62 ATL5 LAG1 AT3G25660 AtCHUP1 AT3G25805 LTA2 RPL15 ATPRX GAMMA-TIP2 ORF02 GAPA CCB1 ATTSO2 GHS1 AT3G27180 RPL12 RPL12-C ATMES11 LTPG2 RPL9 AT3G45030 PTAC16 AT3G47070 AT3G47370 ATNOA1 AT3G47650 EDD AT3G48200 ATBT2 AT3G48420 AT3G48460 PDE312 AHAS GSA2 ATBBC1 RDR6 ATBCAT-3 AT3G49880 OEC33 AT3G51280 AT3G51290 ATSSL4 ATEBP1 ATG4 PSRP2 CP33 FTSZ2-2 AT3G52960 AtPIP2;1 AT3G53430 CP29 AT3G53580 AT3G53740 AT3G53870 HCEF1 FLN1 AT3G54210 AT3G54400 HTA11 AMP1 LHCA1 ATHEX2 PPL1 ATTSC13 ATDFD SBPASE UGP3 AT3G56370 PSRP5 ACSF ATBZIP61 AT3G58140 AT3G58610 AT3G59780 MTHFR1 CUM2 AT3G60245 AT3G60750 AT3G61490 AT3G61870 CYP20-3 AT3G62110 UBQ5 ATDUF7 CP12 BGLU8 AT3G62870 CSP41A OEP6 AtcpRRF APG1 EMB3126 AT4G00165 ANTR2 AT4G00810 AT4G00895 TROL AT4G01310 GLB1 AtGH9B13 AT4G02530 PSAD-1 EMB3129 AT4G02840 BSM PETC ATPC1 PSBQ ATK5 APX4 ATPD ATSPS4F AT4G10300 LHCB5 AT4G11100 AT4G11175 RHA1B PSAL AT4G12830 AT4G13170 NYC1 SHM4 AT4G14330 AT4G14480 ATTCX2 FdC1 TUA6 AT4G15000 CYP97B3 AT4G15545 IAGLU AtCLA1 AT4G16450 AT4G17390 AT4G17560 LIL3:1 AT4G17740 AT4G18100 ATSS4 CH-42 RPL16B AT4G18970 AK-HSDH MORF1 ATRAB8D AT4G20430 ATRP1 PSBQ ATML1 PGR5-LIKE AT4G23740 3xHMG-box2 CRR31 AtHsp90-7 cpHsc70-1 AT4G24350 CER2 PGI AT4G24750 ATRBP31 AT4G24820 AT4G24830 ACP4 CHLM MSRA4 ACYB-2 B1 AT4G26370 AtFBA5 MAP65-2 AR192 AT4G27090 PORB NARA5 AT4G28080 AT4G28360 PSB28 PSAE-1 AT4G28780 emb2726 PFK1 AT4G29360 AT4G29520 AT4G30020 AT4G30330 scpl29 AT4G30825 FAD6 RPS6 PGR3 AT4G31985 PDE334 AT4G32340 AtGLDP1 AT4G33500 KUP5 SEP1 ATCAP1 BLH6 SSR16 AT4G34730 MRL1 CAT2 HCF244 XCP1 LTO1 AT4G35880 AT4G36390 AT4G36530 BEE2 MAP1D XTH7 SHM1 pde191 ATROPGEF1 ATPRP4 AtFBA2 AT4G39040 ATPDX1 LHCB4.1 AT5G01590 STN8 AT5G02160 AT5G02450 AT-HSC70-1 AT5G02870 AT5G02960 ATP58IPK ADK2 AT5G03850 54CP GYRB2 FD-GOGAT BTR1 KCS19 AT5G05200 ATEIF2-A2 AtFAD8 ATEGY2 CYC1BAT 2-Cys AT5G07020 AT5G07030 EMS1 ATRPA70B AT5G08050 scpl35 HEMC FTRA2 AT5G09510 AtPPa6 PMDH2 AT5G09700 AGP4 PAS2 EMP1 AT5G10920 OCP3 PPD5 AT5G11480 SSP5 TUB6 DiT1 ATGSL12 AK EMB3136 SVR3 ATIMD1 EMB3137 AT5G14910 GASA4 ATMIXTA BCCP2 AT5G16130 AT5G16240 DHAR3 ENH1 AT5G17670 EMB1241 ATCBR PSRP6 ATCIMS ATOBGC PCB2 EMB3013 STT3A AtRbcX2 ATIPT9 AT5G20290 ATGER3 ATCPN21 CRR42 AT5G22340 AT5G22440 EMB1030 HCF136 AT5G23650 TUB8 SQE5 ATSS1 APRR5 AT5G24490 AT5G25100 EBF2 AT5G25590 BGLU37 BIP1 ARRPS1 AT5G33370 AT5G35170 AMOS1 CAC2 ATGSL1 G6PD1 AT5G36160 ATPRFB AT5G37010 AT5G38510 AT5G38520 APE1 CRR7 UDG4 OLI7 ATPHB3 RPL27 RPS10B BIP FTSH5 AT5G42720 AT5G42740 RD21B NDH18 AGO10 AT5G44520 CLPP4 AT5G45670 CHL AT5G45950 APE2 KAS1 AT5G46420 BSK2 AT5G46580 TET1 LIL3:2 AT5G47190 AT5G47210 PME5 NF-YB2 AT5G48360 FKBP15-2 LPA66 EMB2812 OVA2 DDM2 cpHsc70-2 CPI1 CAA33 AT5G51110 DYAD AT5G51560 ATMAP65-3 At-NEET ATSBT1.3 ATPGMP AT5G52650 AT5G52780 AT5G52960 AT5G52970 AT5G53150 FTSH11 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G54750 THI1 AT5G55220 ATFTSZ1-1 AT5G55520 CRR21 AtHsp90-3 AtHsp90.2 CSN6A AT5G56670 AT5G56710 AT5G56850 GATA21 AT5G56890 LUT2 NdhN AT5G58330 AtcPT4 ftsh9 ATUCP2 AT5G59850 HTB4 AT5G60390 AT5G61170 EMB2728 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ATCNX1 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. ALDH12A1 AT5G62710 ATNDPK2 GSA1 SHA1 AtBGAL10 CHR24 PSAN ATERS DCT JK218 EMB3144 AT5G65220 KAC2 ATLFNR1 AT5G66470 GAMMA AT5G66530 MSP-1 ATDDM1 ABA1 RLK PSBA MATK RPS16 RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 RPS14 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBE ORF31 PETG PSAJ RPL33 RPS18 RPL20 CLPP1 PSBB PSBT PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 NDHF RPL32 YCF5 NDHD PSAC NDHE NDHG NDHI NDHA RPS15 ribosomal protein S3
GO:0044710
single-organism metabolic process		BP9.782e-95AT1G01080 CYP86A4 ATGPAT4 AT1G02150 CER1 IMPA-6 ATCSLD5 emb2386 FZL ATCPO-I POR ATHM1 AtTPX2 AT1G04420 TOR2 ATPDI10 emb2394 ATCTL1 ADS1 RHON1 AT1G06360 OE23 EMB2784 AT1G07440 PSAO ALB-1V ABC1 AVDE1 ACHT4 CJD1 AT1G09130 AT1G09310 CRB ATATP-PRT2 Z-ISO ATFD1 MORF9 CYP77B1 CLPP6 AT1G11860 AT1G12000 AT1G12230 ATCCS AT1G12800 GAPA-2 CYP71B2 MAP1B AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 AT1G14270 AT1G14345 ATWHY1 AT1G15140 CENP-C CP24 NDF1 AtHBP1 FUG1 ATARCA ATNACK1 AT1G18660 LHCA2*1 ATCLH1 AT1G19960 TUB5 ATLFNR2 DRT112 AT1G21350 AT1G21680 LYM1 ATCOX6B2 AT1G22630 ATCYTC-A ATPIN7 AOAT1 AOR AT1G27120 APT1 AT1G28530 ATPEX7 AT1G29660 PSAK UGT78D1 AT1G30580 AT1G30690 ATIMD3 PSAF CXC750 ATROPGEF14 AT1G31690 ACBP PRK AT1G32470 FdC2 PRPL11 AT1G33811 ATPS1 EMB3003 RPL21C expressed protein localized to the inner membrane of the chloroplast. GAPB Aty2 AtcFBP CYCA1;1 CP22 AtBGAL5 mtLPD1 GATB RACK1B AT1G49380 ATHX UBC20 GDC1 AT1G51110 PSAH-2 ABA2 mMDH1 ATMUM4 AtFAP3 AIN1 AT1G54500 ACP2 AtTLP18.3 AGP21 AT1G55360 CPN60B PSAG AT1G56050 AT1G56190 ATSAR1 AT1G57770 AT1G60000 AT1G60890 ATFD2 LHCA3 ACO2 ATSCO1 AT1G62780 AT1G64650 BDG1 AT1G65230 AT1G66130 GDPDL1 ABA4 RBCS1A ATKCR1 PSBY ATHPR1 AT1G68260 BBX14 PSRP3/1 FLN2 HEMB1 CMT3 PGM2 AT1G70820 AT1G71500 AT1G71695 AT1G72250 EDA17 AT1G73655 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NRP1 AT1G74800 PDE343 emb2184 AT1G75460 AtGH9B7 LQY1 TUB1 ATCDSP32 ATGSTU20 SPS1 AT1G79010 PSBR RECA1 ATKS PGK CS17 APT2 ATIMD2 WIN1 ARR14 AHK4 AT2G03310 SKU6 XERICO AT2G04700 FLA7 ENR1 ABH1 AGP9 PFU2 AT2G17033 ATPRMT1A AT2G20270 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21530 AT2G21960 SCPL8 AT2G24020 AT2G24060 PRPL35 AtTic55 AtENODL14 AtGLDP2 ER ATHO1 BASS2 AT2G27680 HDA13 CSD2 ACA2 TUB7 ATPCNA2 PY AtFAD3 EMB3147 ATFC-II ATGSTF7 FTSH2 BAM6 ATCB5-B ATPDI9 ATCOP1 DAL PRPL28 HMR NF-YA4 EDA3 GDCH AT2G35410 AT2G35840 DML1 GAMMA-TIP MAT3 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 AKR4C10 CAC3 AtAUX1 PSRP4 PDE328 PnsL1 RCA ATFER4 AT2G40400 HEME2 ATKT2 AT2G40660 CYP98A3 GPDHC1 AT2G42130 AT2G42220 AT2G43030 AT2G43090 BIO2 AT2G43560 COS1 MTHFR2 CHL-CPN10 AT2G44920 CYP76C1 CPFTSY ATPMM ATHH2 CYP86A8 SPA1 PSAP CER8 CP12 ATPDI11 PHR2 DEG2 PnsL3 ATBCA1 AT3G02640 EMB2768 ATF1 PDE326 PDE324 ATLTL1 EMB3119 AT3G04840 RPL18 Encodes a defensin-like (DEFL) family protein. ATYLMG1-1 AAC1 PTAC13 AT3G09250 AT3G09440 AT3G09630 ADK1 AT3G09860 AT3G10020 OMR1 AtLCY LGO CYP77A6 GYRA LSF2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST PGK1 AT3G12930 AT3G13120 ESM1 AT3G14220 ATPME3 PRPS20 ATHM4 AT3G15520 AT3G15570 ADS3 MFP1 NDF4 EMB2083 AT3G16370 AT3G16780 AAE7 AT3G17070 RFC3 EMB1270 RACK1C EMB1865 AT3G18940 ATPREP1 ATCAD4 CBB1 ATTCP-1 ATTOP6B AT3G22210 ARLIM15 PKP-ALPHA AT3G23530 AT3G23700 ATSAHH2 ATTOPII AT3G23940 ATMSH1 HCF101 ATMSH7 PLSP1 ERD2B ATL5 LAG1 AT3G25660 AtCHUP1 AT3G25805 LTA2 ATPRX CYP71B22 GAMMA-TIP2 ORF02 GAPA CCB1 ATTSO2 ATMDAR4 AT3G43670 LTPG2 RPL9 PTAC16 ATNOA1 AT3G47650 EDD AT3G48200 AT3G48420 AT3G48460 PDE312 AHAS GSA2 RDR6 DIN11 ATBCAT-3 OEC33 AT3G51280 AT3G51290 ATEBP1 ATG4 PSRP2 CP33 ACA1 FTSZ2-2 AtPIP2;1 AT3G53580 HCEF1 FLN1 AT3G54210 AT3G54400 ATGR2 PPL1 ATTSC13 ATDFD SBPASE UGP3 PSRP5 ACSF AT3G58140 AT3G58610 AT3G59780 MTHFR1 AT3G60750 AT3G61870 CYP20-3 ATDUF7 CP12 CSP41A OEP6 AtcpRRF APG1 EMB3126 ANTR2 AT4G00895 TROL AT4G01310 GLB1 AT4G02530 PSAD-1 EMB3129 BSM PETC ATHM2 ATPC1 ATMSRB6 ATK5 SAPX APX4 ATPD ATSPS4F AT4G10300 LHCB5 CYP706A6 NYC1 AT4G13840 SHM4 AT4G14330 FdC1 AO1 TUA6 CYP97B3 AT4G15545 IAGLU AtCLA1 AT4G16155 AT4G17390 AT4G17560 LIL3:1 AT4G17740 ATSS4 CH-42 AT4G18970 AK-HSDH ATRAB8D ATRP1 AKT2 PGR5-LIKE 3xHMG-box2 AtHsp90-7 AT4G24350 CER2 PGI AT4G24750 ATRBP31 AT4G24820 AT4G24830 AT4G24930 ACP4 CHLM ATFSD1 MSRA4 ACYB-2 B1 AT4G26370 AtFBA5 MAP65-2 AR192 PORB NARA5 AT4G28080 PSB28 PSAE-1 AT4G28780 emb2726 PFK1 AT4G29360 AT4G30020 AT4G30620 FAD6 PGR3 PDE334 AtGLDP1 AT4G33500 KUP5 ATBCA5 SEP1 ALDH3 ATCAP1 SSR16 MRL1 AT4G34950 CAT2 HCF244 XCP1 LTO1 ALDH3F1 AT4G36390 AT4G36530 MAP1D XTH7 NDH-M SHM1 ATROPGEF1 ATPRP4 AtFBA2 AT4G39040 ATCAD9 CYP96A12 PLAT1 AT4G39970 ATPDX1 AT-HSC70-1 AT5G02870 ADK2 54CP FD-GOGAT KCS19 AT5G05200 ATEIF2-A2 AtFAD8 ATEGY2 2-Cys WCRKC1 AT5G07020 ATRPA70B AT5G08050 HEMC FTRA2 AtPPa6 PMDH2 AGP4 PAS2 AT5G10920 PPD5 TUB6 DiT1 ATGSL12 AK EMB3136 ABAR ATIMD1 EMB3137 BETA AT5G14910 GASA4 BCCP2 AT5G16240 ATF2 DHAR3 ENH1 AT5G17670 ATCBR ATCIMS CSD3 PCB2 ATIPT9 ATCPN21 AT5G22340 EMB1030 HCF136 TUB8 SQE5 ATSS1 CYP71B12 AT5G25590 BGLU37 AtTGG1 ARRPS1 AT5G33370 AT5G35170 CAC2 ATGSL1 G6PD1 AT5G36160 ATPRFB AT5G37010 RBCS3B RBCS2B RBCS1B AT5G38520 APE1 CRR7 UDG4 AT5G39410 OLI7 FTSH5 AT5G42740 NDH18 AGO10 AT5G44000 AT5G44520 CLPP4 AT5G45670 CHL AT5G45950 APE2 KAS1 AT5G46420 AT5G46580 TET1 LIL3:2 AT5G47190 AT5G47210 PME5 OVA2 DDM2 ATFRO6 ATFRO7 CPI1 AT5G51110 DYAD ATMAP65-3 At-NEET ATPGMP AT5G52780 AT5G52960 AT5G52970 FTSH11 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G54750 THI1 AT5G55220 ATFTSZ1-1 AT5G55520 CSN6A GATA21 LUT2 NdhN AT5G58330 AtcPT4 ATUCP2 HTB4 ATPDX2 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ALDH12A1 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. emb2746 GSA1 SHA1 PSAN ATERS DCT JK218 AT5G65220 AT5G65840 ATLFNR1 AT5G66470 GAMMA AT5G66530 MSP-1 ATDDM1 ABA1 PSBA RPS16 ATPA ATPF ATPH ATPI PSBD PSBC RPS14 NDHJ PSBG NDHC ATPE ATPB RBCL ACCD PETA PSBE PETG PSAJ PSBB PETB PETD NDHF NDHD PSAC NDHE NDHG NDHI NDHA NDHH
GO:0044085
cellular component biogenesis		BP1.573e-92AT1G02150 ATCSLD5 emb2386 FZL ATCPO-I PSB27 POR ATHM1 AtTPX2 TOR2 atTIC20 emb2394 RHON1 OE23 AT1G06760 HTB1 AT1G07820 PSAO ABC1 AVDE1 CRB MORF9 CLPP6 GAPA-2 AT1G14270 AT1G14345 CENP-C NDF1 HCF173 ATARCA AT1G18360 LHCA2*1 AT1G19740 TUB5 ATLFNR2 AT1G29070 RWA4 PRK AT1G32470 PRPL11 RPL21C GAPB CP22 Lhca5 EMB3105 RACK1B AT1G49380 TUA2 UBC20 GDC1 HTA10 AT1G52220 PSAH-2 AIN1 G-H2AX AtTLP18.3 SVB ATFD2 ATSCO1 AT1G63610 AT1G64510 RBCS1A PSBY ATHPR1 ATXYL1 FLN2 ARC12 HEMB1 AT1G70200 AtCPB AT1G72480 NRP1 AT1G74800 PDE343 emb2184 AT1G75460 AtGH9B7 LQY1 TUB1 PSBR ATKS FLA7 OTP51 AT2G17033 ATCAF1 PSB29 AtFBA1 AT2G21530 IAA8 AT2G24060 AT2G26500 CH-CPN60A AT2G28720 HIS4 ATEXP6 TUB7 KIS PSBW AT2G30620 FTSH2 ARASP DAL AT2G34480 AIR9 GDCH AT2G35410 RPL24A AT2G37660 AtAUX1 PDE328 PnsL1 LHCB4.3 ATFER4 ATOEP16-3 AT2G43030 BIO2 AT2G43560 AGP8 CPFTSY PSAP EMB2768 AT3G06700 AAC1 AT3G08740 DEX1 AT3G09200 AT3G12930 AT3G13120 PRPS20 AT3G16080 PSAH-1 AT3G16370 AT3G16780 RFC3 AT3G18060 EMB1270 CBB1 ATTOP6B ATNFU2 PSBTN AT3G22230 ARLIM15 PKP-ALPHA KINESIN-12B AT3G23700 ATTOPII HSP60 HCF101 PLSP1 ATL5 AtCHUP1 LTA2 ATPRX GAPA CCB1 GHS1 AT3G27180 AT3G27360 AT3G43610 LTPG2 RPL9 AtXTH31 AT3G45850 AT3G45930 H2B HTB11 AT3G46320 PTAC16 AT3G47070 ATNOA1 AT3G47650 GSA2 ATBBC1 OEC33 AT3G51290 ATG4 CP33 FTSZ2-2 AT3G53430 AT3G53730 HCEF1 FLN1 LHCA1 PPL1 SBPASE AT3G56370 ACSF AT3G60245 AT3G60750 AT3G61870 ATDUF7 AT3G62870 CSP41A AtcpRRF EMB3126 TROL AT4G02530 PSAD-1 PETC ATPC1 ATK5 APX4 ATPD LHCB5 PSAL AtENODL19 FdC1 AO1 TUA6 AT4G15830 AT4G16450 AT4G17560 LIL3:1 AT4G18100 CH-42 PSBQ ATML1 PGR5-LIKE CER2 AT4G24750 ATRBP31 AT4G24820 ACP4 CHLM AT4G26370 MAP65-2 AT4G27090 TET7 PSB28 GrxC5 PSAE-1 AT4G30020 ATCSLC05 RPS6 AtENODL15 PDE334 SEP1 SSR16 AT4G34730 HCF244 XCP1 LTO1 AT4G36390 NDH-M pde191 AtFBA2 AT4G39040 LHCB4.1 OHP AT5G03850 54CP ATEGY2 HEMC PMDH2 AT5G10400 KAC1 AT5G11480 TUB6 DiT1 EMB3136 EMB3137 AT5G16130 ENH1 ATOBGC PCB2 EMB3013 STT3A TUA3 AT5G20290 CRR42 AT5G22340 AT5G22440 emb1211 H2B HCF136 TUB8 ARRPS1 AMOS1 ATPRFB RBCS3B AT5G38520 APE1 CRR7 OLI7 ABIL4 AtCEST CLPP4 AT5G46420 AT5G46580 AT5G47190 LPA66 OVA2 CPI1 AT5G51110 ATMAP65-3 AT5G52780 AT5G52960 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. ATFTSZ1-1 AT5G55520 CSN6A AT5G56710 NdhN AT5G58330 AT5G59690 HTA6 HTB4 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. TUB3 JK218 EMB3144 AT5G65220 AT5G65360 ATLFNR1 AT5G66470 GAMMA MSP-1 PSBA PSBK PSBI ATPA ATPH PSBD PSBC YCF3 NDHJ NDHC YCF4 PETA PSBL PETG RPS18 PSBB PSBH PETB PETD YCF5 NDHI NDHA
GO:0019288
isopentenyl diphosphate biosynthetic pro...		BP2.727e-92AT1G01080 AT1G02150 POR AT1G04420 emb2394 EMB2784 ALB-1V ABC1 AVDE1 AT1G09130 CRB CLPP6 AT1G12800 AT1G14270 AT1G14345 FUG1 AT1G18660 LHCA2*1 AOR FdC2 PRPL11 GAPB AT1G49380 GDC1 AtTLP18.3 AT1G62780 AT1G65230 PSRP3/1 AT1G74070 emb2184 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 SCPL8 AT2G24060 AT2G27680 PY ATFC-II PRPL28 EDA3 AT2G35410 AT2G37660 AT2G42130 AT2G43030 AT2G43560 AT2G44920 CPFTSY PHR2 DEG2 ATF1 PDE326 EMB3119 PTAC13 AT3G09860 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 AT3G15520 ADS3 MFP1 NDF4 EMB1865 AT3G23700 HCF101 AT3G25805 LTA2 CCB1 RPL9 ATNOA1 AT3G47650 ATG4 PSRP2 CP33 AT3G54210 SBPASE ACSF AT3G58140 AT3G59780 AT3G60750 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 TROL AT4G01310 GLB1 AT4G02530 EMB3129 ATPC1 APX4 ATPD AT4G10300 FdC1 CYP97B3 AtCLA1 AT4G17560 LIL3:1 CH-42 PGI AT4G24750 ACP4 CHLM NARA5 AT4G28080 PSB28 emb2726 FAD6 PGR3 AtGLDP1 SEP1 MRL1 HCF244 LTO1 AtFBA2 AT4G39040 54CP ATEGY2 HEMC PMDH2 PPD5 EMB3137 AT5G14910 PCB2 ATCPN21 ARRPS1 G6PD1 NDH18 CLPP4 CHL ATPGMP AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 ATNDPK2 AT5G66470 NDHE
GO:1901135
carbohydrate derivative metabolic proces...		BP6.498e-92AT1G01080 AT1G02150 POR ATHM1 AT1G04420 emb2394 ATCTL1 EMB2784 AT1G07440 PSAO ALB-1V ABC1 AVDE1 AT1G09130 CRB ATFD1 CLPP6 AT1G12230 AT1G12800 PnsL2 AT1G14270 AT1G14345 NDF1 AtHBP1 FUG1 ATARCA AT1G18660 LHCA2*1 ATLFNR2 DRT112 AT1G22630 AOR AT1G27120 AT1G28530 PRK AT1G32470 FdC2 PRPL11 GAPB AtcFBP RACK1B AT1G49380 GDC1 AT1G51110 ATMUM4 AIN1 AtTLP18.3 ATSCO1 AT1G62780 AT1G65230 PSRP3/1 FLN2 HEMB1 PGM2 AT1G70820 AT1G74070 AT1G74800 emb2184 LQY1 APT2 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21530 AT2G21960 SCPL8 AT2G24060 PRPL35 BASS2 AT2G27680 PY ATFC-II FTSH2 PRPL28 EDA3 GDCH AT2G35410 MAT3 AT2G37660 AT2G40660 GPDHC1 AT2G42130 AT2G43030 AT2G43560 AT2G44920 CPFTSY PSAP PHR2 DEG2 ATBCA1 ATF1 PDE326 EMB3119 AT3G04840 RPL18 Encodes a defensin-like (DEFL) family protein. ATYLMG1-1 PTAC13 AT3G09630 ADK1 AT3G09860 GYRA Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 ATHM4 AT3G15520 ADS3 MFP1 NDF4 AT3G16780 RACK1C EMB1865 ATTCP-1 AT3G22210 AT3G23700 AT3G23940 HCF101 PLSP1 ATL5 AT3G25805 LTA2 ATPRX CCB1 ATMDAR4 RPL9 PTAC16 ATNOA1 AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATEBP1 ATG4 PSRP2 CP33 FTSZ2-2 HCEF1 AT3G54210 PPL1 SBPASE UGP3 ACSF AT3G58140 AT3G59780 AT3G60750 AT3G61870 CYP20-3 CSP41A AtcpRRF APG1 EMB3126 ANTR2 AT4G00895 TROL AT4G01310 GLB1 AT4G02530 EMB3129 PETC ATPC1 APX4 ATPD ATSPS4F AT4G10300 AT4G13840 FdC1 CYP97B3 AtCLA1 AT4G17390 AT4G17560 LIL3:1 ATSS4 CH-42 ATRP1 PGR5-LIKE AT4G24350 PGI AT4G24750 AT4G24930 ACP4 CHLM AtFBA5 AR192 NARA5 AT4G28080 PSB28 emb2726 AT4G30020 FAD6 PGR3 PDE334 AtGLDP1 SEP1 MRL1 AT4G34950 HCF244 LTO1 XTH7 AtFBA2 AT4G39040 AT4G39970 ATPDX1 AT5G02870 ADK2 54CP ATEIF2-A2 ATEGY2 2-Cys AT5G08050 HEMC AtPPa6 PMDH2 PPD5 ATIMD1 EMB3137 AT5G14910 ENH1 AT5G17670 PCB2 ATCPN21 HCF136 ATSS1 BGLU37 AtTGG1 ARRPS1 ATGSL1 G6PD1 AT5G38520 UDG4 OLI7 GPDHp FTSH5 NDH18 AT5G44520 CLPP4 CHL AT5G47210 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 FTSH11 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 ATFTSZ1-1 NdhN AT5G58330 ATNDPK2 PSAN ATLFNR1 AT5G66470 GAMMA ATPA ATPF ATPH ATPI ATPE ATPB NDHF NDHD NDHE
GO:0009240
isopentenyl diphosphate biosynthetic pro...		BP7.875e-92AT1G01080 AT1G02150 POR AT1G04420 emb2394 EMB2784 ALB-1V ABC1 AVDE1 AT1G09130 CRB CLPP6 AT1G12800 AT1G14270 AT1G14345 FUG1 AT1G18660 LHCA2*1 AOR FdC2 PRPL11 GAPB AT1G49380 GDC1 AtTLP18.3 AT1G62780 AT1G65230 PSRP3/1 AT1G74070 emb2184 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 SCPL8 AT2G24060 AT2G27680 PY ATFC-II PRPL28 EDA3 AT2G35410 AT2G37660 AT2G42130 AT2G43030 AT2G43560 AT2G44920 CPFTSY PHR2 DEG2 ATF1 PDE326 EMB3119 PTAC13 AT3G09860 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 AT3G15520 ADS3 MFP1 NDF4 EMB1865 AT3G23700 HCF101 AT3G25805 LTA2 CCB1 RPL9 ATNOA1 AT3G47650 ATG4 PSRP2 CP33 AT3G54210 SBPASE ACSF AT3G58140 AT3G59780 AT3G60750 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 TROL AT4G01310 GLB1 AT4G02530 EMB3129 ATPC1 APX4 ATPD AT4G10300 FdC1 CYP97B3 AtCLA1 AT4G17560 LIL3:1 CH-42 PGI AT4G24750 ACP4 CHLM NARA5 AT4G28080 PSB28 emb2726 FAD6 PGR3 AtGLDP1 SEP1 MRL1 HCF244 LTO1 AtFBA2 AT4G39040 54CP ATEGY2 HEMC PMDH2 PPD5 EMB3137 AT5G14910 PCB2 ATCPN21 ARRPS1 G6PD1 NDH18 CLPP4 CHL ATPGMP AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 ATNDPK2 AT5G66470 NDHE
GO:0046490
isopentenyl diphosphate metabolic proces...		BP7.875e-92AT1G01080 AT1G02150 POR AT1G04420 emb2394 EMB2784 ALB-1V ABC1 AVDE1 AT1G09130 CRB CLPP6 AT1G12800 AT1G14270 AT1G14345 FUG1 AT1G18660 LHCA2*1 AOR FdC2 PRPL11 GAPB AT1G49380 GDC1 AtTLP18.3 AT1G62780 AT1G65230 PSRP3/1 AT1G74070 emb2184 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 SCPL8 AT2G24060 AT2G27680 PY ATFC-II PRPL28 EDA3 AT2G35410 AT2G37660 AT2G42130 AT2G43030 AT2G43560 AT2G44920 CPFTSY PHR2 DEG2 ATF1 PDE326 EMB3119 PTAC13 AT3G09860 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 AT3G15520 ADS3 MFP1 NDF4 EMB1865 AT3G23700 HCF101 AT3G25805 LTA2 CCB1 RPL9 ATNOA1 AT3G47650 ATG4 PSRP2 CP33 AT3G54210 SBPASE ACSF AT3G58140 AT3G59780 AT3G60750 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 TROL AT4G01310 GLB1 AT4G02530 EMB3129 ATPC1 APX4 ATPD AT4G10300 FdC1 CYP97B3 AtCLA1 AT4G17560 LIL3:1 CH-42 PGI AT4G24750 ACP4 CHLM NARA5 AT4G28080 PSB28 emb2726 FAD6 PGR3 AtGLDP1 SEP1 MRL1 HCF244 LTO1 AtFBA2 AT4G39040 54CP ATEGY2 HEMC PMDH2 PPD5 EMB3137 AT5G14910 PCB2 ATCPN21 ARRPS1 G6PD1 NDH18 CLPP4 CHL ATPGMP AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 ATNDPK2 AT5G66470 NDHE
GO:0044249
cellular biosynthetic process		BP2.440e-90AT1G01080 AT1G01100 ATGPAT4 AT1G02150 CER1 IMPA-6 ATCSLD5 emb2386 FZL ATCPO-I POR ATHM1 AtTPX2 RPS15 AT1G04420 PDLP2 AT1G04800 emb2394 ATCTL1 ADS1 ORA59 RHON1 OE23 EMB2784 AT1G07440 RPS15A AT1G08360 PSAO ALB-1V ABC1 AVDE1 AT1G09130 AT1G09310 CRB AT1G09590 AT1G09690 ATATP-PRT2 ARR4 Z-ISO ATFD1 MORF9 CLPP6 AT1G11860 AT1G12000 AT1G12230 AT1G12800 ICE2 AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14270 RPL10 AT1G14345 ATWHY1 ATDEF1 CENP-C CP24 NDF1 HCF173 AtHBP1 FUG1 ATARCA AT1G18540 AT1G18660 LHCA2*1 BES1 ATCLH1 ATLFNR2 DRT112 AT1G21740 ATCOX6B2 AT1G22630 FB RPL27A AOAT1 AOR BBX15 AT1G27120 APT1 AT1G28530 AT1G29070 PSAK ATIMD3 PSAF CXC750 ATROPGEF14 ACBP PRK AT1G32470 FdC2 PRPL11 PGY2 ATPS1 ARF20 RPL21C expressed protein localized to the inner membrane of the chloroplast. GAPB ARP1 Aty2 AtcFBP CYCA1;1 CP22 EMB3105 GATB RACK1B AT1G49380 UBC20 GDC1 AT1G51110 PSAH-2 ABA2 ATMUM4 AT1G54410 AIN1 AT1G54500 ACP2 AtTLP18.3 AGP21 AT1G55360 CPN60B PSAG AT1G56050 AT1G56190 AT1G57770 AT1G60000 ACLA-2 LHCA3 ACO2 ATSCO1 AT1G62780 AT1G64510 BDG1 RPOD1 AT1G65230 ABA4 ATKCR1 PSBY ATHPR1 ADO3 AT1G68260 BBX14 PSRP3/1 FLN2 HEMB1 CMT3 AT1G70600 PGM2 AT1G70820 AT1G72250 ATHDG11 AT1G73655 BEE3 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G74800 PDE343 RPS9 emb2184 AT1G75460 ATGSTU20 SPS1 emb1473 AT1G78995 PSBR RECA1 ATKS CS17 APT2 ATIMD2 WIN1 ARR14 WRKY3 AT2G04700 ENR1 AGT ABH1 AT2G16365 AT2G17033 HBI1 SCY1 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21530 IAA8 SCPL8 AT2G24060 PRPL35 ATHO1 BASS2 PGY1 AT2G27680 HDA13 ATPCNA2 PY AtFAD3 EMB3147 ATFC-II ATGSTF7 FTSH2 AT2G32060 BAM6 ATCB5-B AT2G33370 DAL PRPL28 EMB3113 AT2G34480 HMR NF-YA4 EDA3 GTE01 GDCH AT2G35410 AT2G35840 AT2G36350 DML1 RPL24A MAT3 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ATRPS5B AT2G37660 CAC3 PSRP4 PDE328 PnsL1 RCA AteIF3f AT2G40400 HEME2 ATKT2 AT2G40660 ARR16 CYP98A3 ATCBK3 AT2G42130 ATOEP16-3 AT2G42220 AT2G42650 AT2G43030 AT2G43090 BIO2 AT2G43560 COS1 AT2G44120 CHL-CPN10 AT2G44920 AT2G45700 CPFTSY ATPMM CER8 PHR2 DEG2 PnsL3 ATBCA1 EMB2768 ATF1 PDE326 PDE324 emb2171 EMB3119 AT3G04840 RPL18 Encodes a defensin-like (DEFL) family protein. AT3G06700 AT3G07110 ATYLMG1-1 AAC1 AT3G08740 AT3G09200 PTAC13 AT3G09630 ADK1 AT3G09860 OMR1 AtLCY LGO GYRA LSF2 AT3G11120 AT3G11510 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. AML1 ATHST PGK1 AT3G12930 AT3G13120 ESM1 ATPME3 GOX2 GOX1 PRPS20 ATHM4 AT3G15520 AT3G15570 ADS3 MFP1 AT3G16080 NDF4 EMB2083 ATEBP AT3G16780 RFC3 POK1 EMB1270 RACK1C EMB1865 ATCAD4 CBB1 ATTCP-1 ATTOP6B AT3G22210 AT3G22230 AT3G23700 ATSAHH2 ATTOPII AT3G23940 ATMSH1 HCF101 ATMSH7 PLSP1 ERD2B ATFKBP62 ATL5 LAG1 AT3G25660 AtCHUP1 AT3G25805 LTA2 RPL15 ATPRX GAMMA-TIP2 ORF02 CCB1 ATTSO2 GHS1 ATMDAR4 RPL12 RPL12-C ATMES11 RPL9 AT3G45030 PTAC16 AT3G47370 ATNOA1 AT3G47650 EDD AT3G48200 ATBT2 AT3G48420 AT3G48460 PDE312 AHAS GSA2 ATBBC1 OEC33 AT3G51280 AT3G51290 ATSSL4 ATEBP1 ATG4 PSRP2 CP33 FTSZ2-2 AtPIP2;1 AT3G53430 AT3G53580 AT3G53740 AT3G53870 HCEF1 FLN1 AT3G54210 AT3G54400 ATTSC13 ATDFD SBPASE UGP3 PSRP5 ACSF ATBZIP61 AT3G58140 AT3G58610 AT3G59780 AT3G60245 AT3G60750 AT3G61870 CYP20-3 UBQ5 ATDUF7 AT3G62870 CSP41A OEP6 AtcpRRF APG1 EMB3126 AT4G00165 AT4G00810 AT4G00895 TROL AT4G01310 GLB1 AT4G02530 PSAD-1 EMB3129 BSM PETC ATPC1 PSBQ ATK5 APX4 ATPD ATSPS4F AT4G10300 LHCB5 AT4G11175 AT4G13170 AT4G13840 AT4G14330 ATTCX2 FdC1 AT4G15000 CYP97B3 AtCLA1 AT4G16450 AT4G17390 AT4G17560 LIL3:1 AT4G17740 AT4G18100 ATSS4 CH-42 RPL16B AK-HSDH ATRAB8D ATRP1 ATML1 PGR5-LIKE AtHsp90-7 CER2 PGI AT4G24750 ATRBP31 AT4G24820 AT4G24830 AT4G24930 ACP4 CHLM ACYB-2 B1 AT4G26370 AtFBA5 MAP65-2 AR192 AT4G27090 PORB NARA5 AT4G28080 AT4G28360 PSB28 PSAE-1 emb2726 AT4G29360 AT4G30020 FAD6 RPS6 PGR3 AT4G31985 PDE334 AT4G32340 AtGLDP1 AT4G33500 KUP5 SEP1 BLH6 SSR16 AT4G34730 MRL1 AT4G34950 HCF244 XCP1 LTO1 AT4G36390 AT4G36530 BEE2 MAP1D XTH7 SHM1 pde191 ATPRP4 AtFBA2 AT4G39040 ATCAD9 PLAT1 AT4G39970 ATPDX1 AT5G02160 AT5G02450 AT5G02870 AT5G02960 ADK2 AT5G03850 54CP GYRB2 FD-GOGAT KCS19 AT5G05200 ATEIF2-A2 AtFAD8 ATEGY2 2-Cys AT5G07020 ATRPA70B AT5G08050 HEMC FTRA2 AT5G09510 AtPPa6 PMDH2 PAS2 EMP1 AT5G10920 OCP3 PPD5 TUB6 DiT1 ATGSL12 AK EMB3136 ABAR ATIMD1 EMB3137 BETA AT5G14910 GASA4 ATMIXTA BCCP2 AT5G16130 AT5G16240 ATCBR PSRP6 ATCIMS PCB2 ATIPT9 AT5G20290 ATCPN21 AT5G22340 AT5G22440 EMB1030 HCF136 AT5G23650 SQE5 ATSS1 APRR5 AT5G24490 AT5G25100 AT5G25590 ARRPS1 AT5G35170 AMOS1 CAC2 ATGSL1 G6PD1 AT5G36160 ATPRFB AT5G37010 AT5G38520 APE1 CRR7 UDG4 OLI7 RPL27 RPS10B FTSH5 NDH18 AGO10 CLPP4 CHL APE2 KAS1 AT5G46420 BSK2 AT5G46580 TET1 AT5G47190 AT5G47210 NF-YB2 EMB2812 OVA2 DDM2 AT5G51110 ATMAP65-3 ATPGMP AT5G52650 AT5G52960 AT5G52970 FTSH11 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G54750 THI1 AT5G55220 ATFTSZ1-1 CRR21 CSN6A AT5G56670 AT5G56710 GATA21 LUT2 NdhN AT5G58330 AtcPT4 ATUCP2 AT5G59850 AT5G60390 ATPDX2 AT5G61170 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. GSA1 SHA1 CHR24 PSAN ATERS AT5G65220 KAC2 ATLFNR1 AT5G66470 GAMMA MSP-1 ATDDM1 ABA1 PSBA MATK RPS16 RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 RPS14 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBE ORF31 PETG PSAJ RPL33 RPS18 RPL20 CLPP1 PSBB PSBT PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 RPL32 YCF5 NDHD PSAC NDHE NDHG NDHI NDHA RPS15 ribosomal protein S3
GO:0032787
monocarboxylic acid metabolic process		BP8.732e-90AT1G01080 CYP86A4 ATGPAT4 AT1G02150 emb2386 ATCPO-I POR AT1G04420 emb2394 ATCTL1 ADS1 OE23 EMB2784 ALB-1V ABC1 AVDE1 CJD1 AT1G09130 CRB ATFD1 CLPP6 AT1G12000 AT1G12230 AT1G12800 GAPA-2 MAP1B Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14270 AT1G14345 FUG1 ATARCA AT1G18660 LHCA2*1 ATLFNR2 AT1G21680 AOAT1 AOR APT1 ATPEX7 AT1G30580 CXC750 PRK FdC2 PRPL11 GAPB AT1G49380 GDC1 ABA2 mMDH1 AtFAP3 ACP2 AtTLP18.3 AT1G56190 ACO2 AT1G62780 BDG1 AT1G65230 ABA4 ATKCR1 PSRP3/1 EDA17 AT1G74070 NRP1 emb2184 ATGSTU20 PGK XERICO ENR1 AT2G20270 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 SCPL8 AT2G24020 AT2G24060 AT2G27680 PY AtFAD3 ATFC-II ATGSTF7 PRPL28 EDA3 GDCH AT2G35410 GAMMA-TIP Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 CAC3 RCA AT2G42130 AT2G43030 AT2G43090 BIO2 AT2G43560 CHL-CPN10 AT2G44920 CPFTSY ATPMM ATHH2 CYP86A8 CER8 ATPDI11 PHR2 DEG2 ATBCA1 ATF1 PDE326 EMB3119 PTAC13 AT3G09860 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 ATPME3 ATHM4 AT3G15520 ADS3 MFP1 NDF4 AT3G16370 AAE7 RFC3 EMB1865 AT3G18940 PKP-ALPHA AT3G23700 HCF101 AT3G25805 LTA2 GAMMA-TIP2 GAPA CCB1 LTPG2 RPL9 ATNOA1 AT3G47650 ATG4 PSRP2 CP33 AtPIP2;1 AT3G54210 SBPASE ACSF AT3G58140 AT3G58610 AT3G59780 AT3G60750 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 TROL AT4G01310 GLB1 AT4G02530 EMB3129 PETC ATPC1 APX4 ATPD AT4G10300 FdC1 CYP97B3 IAGLU AtCLA1 AT4G17560 LIL3:1 CH-42 ATRAB8D AtHsp90-7 CER2 PGI AT4G24750 AT4G24820 ACP4 CHLM B1 AtFBA5 NARA5 AT4G28080 PSB28 emb2726 PFK1 AT4G30620 FAD6 PGR3 PDE334 AtGLDP1 ATBCA5 SEP1 MRL1 HCF244 LTO1 SHM1 AtFBA2 AT4G39040 PLAT1 AT-HSC70-1 54CP FD-GOGAT KCS19 AtFAD8 ATEGY2 2-Cys HEMC FTRA2 AtPPa6 PMDH2 PAS2 PPD5 TUB6 EMB3137 BETA AT5G14910 BCCP2 AT5G16240 PCB2 ATCPN21 ARRPS1 CAC2 ATGSL1 G6PD1 AT5G36160 OLI7 AT5G42740 NDH18 AT5G44520 CLPP4 CHL AT5G45950 KAS1 LIL3:2 ATPGMP AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 HTB4 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. ATLFNR1 AT5G66470 MSP-1 ABA1 RPS14 ACCD NDHE
GO:0006090
pyruvate metabolic process		BP1.243e-88AT1G01080 AT1G02150 emb2386 POR AT1G04420 emb2394 ATCTL1 EMB2784 ALB-1V ABC1 AVDE1 AT1G09130 CRB CLPP6 AT1G12000 AT1G12800 GAPA-2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14270 AT1G14345 FUG1 ATARCA AT1G18660 LHCA2*1 AOR APT1 AT1G30580 FdC2 PRPL11 GAPB AT1G49380 GDC1 mMDH1 AtTLP18.3 AT1G56190 ACO2 AT1G62780 AT1G65230 PSRP3/1 AT1G74070 NRP1 emb2184 PGK PSB29 PDTPI ATSULA AtFBA1 AT2G21385 SCPL8 AT2G24060 AT2G27680 PY ATFC-II PRPL28 EDA3 AT2G35410 GAMMA-TIP AT2G37660 AT2G42130 AT2G43030 AT2G43090 AT2G43560 AT2G44920 CPFTSY ATPMM ATHH2 ATPDI11 PHR2 DEG2 ATF1 PDE326 EMB3119 PTAC13 AT3G09860 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 AT3G15520 ADS3 MFP1 NDF4 EMB1865 PKP-ALPHA AT3G23700 HCF101 AT3G25805 LTA2 GAMMA-TIP2 GAPA CCB1 RPL9 ATNOA1 AT3G47650 ATG4 PSRP2 CP33 AtPIP2;1 AT3G54210 SBPASE ACSF AT3G58140 AT3G58610 AT3G59780 AT3G60750 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 TROL AT4G01310 GLB1 AT4G02530 EMB3129 ATPC1 APX4 ATPD AT4G10300 FdC1 CYP97B3 AtCLA1 AT4G17560 LIL3:1 CH-42 AtHsp90-7 PGI AT4G24750 ACP4 CHLM AtFBA5 NARA5 AT4G28080 PSB28 emb2726 PFK1 FAD6 PGR3 AtGLDP1 SEP1 MRL1 HCF244 LTO1 AtFBA2 AT4G39040 AT-HSC70-1 54CP ATEGY2 HEMC PMDH2 PPD5 TUB6 EMB3137 AT5G14910 PCB2 ATCPN21 ARRPS1 ATGSL1 G6PD1 OLI7 AT5G42740 NDH18 CLPP4 CHL ATPGMP AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 ATNDPK2 AT5G66470 NDHE
GO:0006996
organelle organization		BP7.679e-88AT1G02150 IMPA-6 ATCSLD5 FZL PSB27 POR ATHM1 AtTPX2 TOR2 atTIC20 emb2394 ATCTL1 RHON1 OE23 AT1G06760 ATTIC110 HTB1 AT1G07820 PSAO ABC1 CRB MORF9 CLPP6 AT1G11860 AT1G12000 AT1G12800 GAPA-2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. ATWHY1 ATMAP70-4 CENP-C CP24 FUG1 ATLP-1 ATNACK1 TUB5 ATLFNR2 DRT112 AT1G21350 LYM1 ATPEX7 ACBP PRK AtLrgB AT1G32470 PRPL11 ATPS1 RPL21C GAPB Aty2 AT1G44000 CYCA1;1 CP22 Lhca5 AT1G49380 UBC20 AUG4 GDC1 HTA10 AT1G51110 AT1G52220 PSAH-2 mMDH1 AIN1 G-H2AX AtTLP18.3 ATSAR1 ACO2 ATSCO1 AT1G62780 AT1G64510 AT1G65230 PTAC4 PSBY ATHPR1 PSRP3/1 FLN2 ARC12 CMT3 AT1G70200 AtCPB AT1G72250 AT1G72480 NRP1 AT1G74800 PDE343 emb2184 LQY1 TUB1 TAPX RECA1 EMB1047 CS17 SKU6 AtHsp90.5 ENR1 ABH1 AT2G16365 SCY1 ATPRMT1A ATCAF1 PSB29 PDTPI ATSULA AtFBA1 AT2G21530 IAA8 AtENODL14 AT2G26500 AT2G27680 CH-CPN60A AT2G28720 HIS4 ATEXP6 TUB7 ATPCNA2 PSBW AT2G30620 FTSH2 ARASP DAL HMR AIR9 EDA3 GDCH AT2G35410 AT2G36350 DML1 GAMMA-TIP MAT3 AT2G37400 AtAUX1 PSRP4 PDE328 ATFER4 AT2G40660 AT2G42130 AT2G43090 BIO2 AT2G43560 AT2G44870 AT2G45700 PEX11D CPFTSY ATPMM ATHH2 SPA1 PSAP DEG2 AT3G02640 EMB2768 PDE324 TPR10 AT3G05470 ATYLMG1-1 AAC1 PTAC13 OMR1 GYRA PGK1 AT3G13120 WIP3 Cpn60beta2 ATHM4 MFP1 PSAH-1 AQP1 AT3G16780 POK1 AT3G18060 EMB1270 EMB1865 ATPREP1 ATTCP-1 ATTOP6B PSBTN NET1A ARLIM15 KINESIN-12B AT3G23700 ATSAHH2 ATTOPII HSP60 ATMSH1 HCF101 ATMSH7 PLSP1 AtCHUP1 LTA2 GAMMA-TIP2 GAPA CCB1 AT3G27360 AT3G43610 AT3G45850 AT3G45930 H2B HTB11 AT3G46320 MAR1 PTAC16 AT3G47070 ATNOA1 AT3G47650 EDD AT3G48200 AT3G48420 PDE312 OEC33 AT3G51280 AT3G51290 ATSSL4 AT3G51720 ATG4 AT3G52110 CP33 FTSZ2-2 AtPIP2;1 AT3G53730 ACT3 HCEF1 FLN1 HTA11 ATGR2 PPL1 ATTSC13 SBPASE PSRP5 ACSF AT3G58140 CUM2 AT3G60750 AT3G61870 ATDUF7 CSP41A AtcpRRF EMB3126 TROL AGY1 GLB1 AT4G02530 PSAD-1 EMB3129 BSM PETC ATPC1 ATK5 ATPD AT4G11175 PSAL AtENODL19 EDA38 AT4G14330 TUA6 AT4G15830 AT4G17390 LIL3:1 AT4G19410 PSBQ ATML1 PGR5-LIKE 3xHMG-box2 AtHsp90-7 cpHsc70-1 AT4G24750 ACP4 AT4G26370 MAP65-2 AR192 NARA5 TET7 PSAE-1 emb2726 AT4G29360 AT4G30020 AtENODL15 PGR3 PDE334 AT4G32530 SEP1 ATCAP1 SSR16 AT4G34730 MRL1 AT4G36390 pde191 AtFBA2 GYRB2 FD-GOGAT ATEGY2 2-Cys AT5G07020 ATRPA70B AT5G08050 PMDH2 AT5G10400 KAC1 PPD5 AT5G11480 TUB6 ATGSL12 EMB3136 AT5G13770 DHAR3 ENH1 ATOBGC ATCPN21 emb1211 H2B HCF136 TUB8 AtENODL13 AT5G25590 BIP1 ARRPS1 AMOS1 ATGSL1 ATPRFB AT5G37010 AT5G38520 AT5G39410 EMB139 ATPHB3 BIP ABIL4 NDH18 AGO10 ATTOM22-V AtCEST CLPP4 KAS1 AT5G47190 PME5 AT5G48360 LPA66 OVA2 DDM2 CPI1 CAA33 AT5G51110 DYAD ATMAP65-3 HCF106 AT5G52970 PDV1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 ATFTSZ1-1 AT5G55520 AT5G58330 AT5G59690 HTA6 HTB4 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. ATERS EMB3144 AT5G65220 AT5G65360 KAC2 ATLFNR1 AT5G66470 MSP-1 ATDDM1
GO:0044699
single-organism process		BP9.088e-86AT1G01080 CYP86A4 ATGPAT4 ATKEA1 AT1G02150 CER1 IMPA-6 ATCSLD5 emb2386 PSAD-2 FZL ATCPO-I POR ATHM1 AtTPX2 AtSDD1 AT1G04420 TOR2 atTIC20 ATPDI10 emb2394 ATCTL1 ADS1 ORA59 RHON1 AT1G06360 OE23 ATTIC110 EMB2784 AT1G07440 PSAO ALB-1V ABC1 AVDE1 ACHT4 CJD1 AT1G09130 AT1G09310 CRB ATATP-PRT2 ARR4 Z-ISO ATFD1 MORF9 CYP77B1 CLPP6 AT1G11860 AT1G12000 AT1G12230 AT1G12460 ATCCS AT1G12800 ICE2 GAPA-2 CYP71B2 MAP1B AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 AT1G14270 AT1G14345 ATWHY1 AT1G15140 CENP-C AtAVP1 CP24 NDF1 HCF173 ACR11 AtHBP1 AT1G17200 FUG1 ATARCA ATLP-1 ATNACK1 AT1G18660 LHCA2*1 BES1 ATCLH1 APS2 AT1G19960 TUB5 ATLFNR2 ATEXP11 DRT112 AT1G21350 AT1G21680 LYM1 ATCOX6B2 AT1G22630 FB ATCYTC-A ATPIN7 RPL27A AOAT1 AOR AT-EXP10 AT1G27120 APT1 AT1G28530 ATPEX7 AT1G29660 PSAK UGT78D1 AT1G30580 AT1G30690 ATIMD3 PSAF CXC750 ATROPGEF14 AT1G31690 ACBP PRK AtLrgB AT1G32160 AT1G32470 FdC2 PRPL11 PGY2 AT1G33811 OHP2 ATPS1 EMB3003 RPL21C expressed protein localized to the inner membrane of the chloroplast. GAPB ARP1 Aty2 AtcFBP CYCA1;1 CP22 AtBGAL5 Lhca5 mtLPD1 EMB3105 RKL1 GATB RACK1B AT1G49380 AT1G49750 AT1G49870 TUA2 ATHX UBC20 AUG4 GDC1 AT1G51110 AT1G52190 AT1G52220 PSAH-2 ABA2 mMDH1 ATMUM4 AtFAP3 AIN1 AT1G54500 ACP2 G-H2AX AtTLP18.3 AGP21 AT1G55360 CPN60B PSAG AT1G56050 AT1G56190 ATSAR1 SVB AT1G57770 AT1G60000 AT1G60890 ATFD2 LHCA3 ACO2 AT1G62500 ATSCO1 AT1G62770 AT1G62780 AT1G64510 AT1G64650 BDG1 RPOD1 AT1G65230 PTAC4 GLC AT1G66130 GDPDL1 ABA4 RBCS1A ATKCR1 PSBY AT1G67870 ATHPR1 ADO3 AT1G68260 BBX14 PSRP3/1 AT1G68780 FLN2 ARC12 AT-EXP1 HEMB1 CMT3 AT1G70200 ATGH9B1 PGM2 AT1G70820 AT1G71500 AT1G71695 AtCPB AT1G72250 AT1G72480 EDA17 ATHDG11 AT1G73655 AT1G74070 TRM4 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NRP1 GASA6 AT1G74730 AT1G74800 PDE343 emb2184 AT1G75460 AtGH9B7 LQY1 TUB1 ATCDSP32 TAPX ATGSTU20 SPS1 emb1473 AT1G78995 AT1G79010 PSBR RECA1 ATKS PGK EMB1047 CS17 APT2 AtRLP17 AT1G80440 ATIMD2 WIN1 ARR14 AHK4 ARPN AT2G03310 ATNRP1 SKU6 AtHsp90.5 ZIP7 XERICO AT2G04700 FLA7 AT2G05790 ENR1 AT2G10940 AT2G10970 AGT ABH1 AGP9 AtTic21 MEE14 ATCOR413-PM1 PFU2 AT2G17033 HBI1 SCY1 TXND9 ATPRMT1A PSAE-2 AT2G20270 ATXIG A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI ATSULA AT2G21300 AtFBA1 AT2G21385 AT2G21530 AT2G21960 IAA8 SCPL8 AT2G24020 AT2G24060 PRPL35 AtTic55 AtENODL14 AtGLDP2 ER ATHO1 CYCB1;4 BASS2 ABCG32 PGY1 AT2G27680 HDA13 CH-CPN60A CSD2 ACA2 AT2G28790 ATEXP6 TUB7 ATPCNA2 PY AtFAD3 EMB3147 ATFC-II KIS ATGSTF7 FTSH2 GUN1 PRORP1 BAM6 ATGLR3.7 ATCB5-B ATPDI9 ATCOP1 DAL PRPL28 AT2G33620 EMB3113 HMR AIR9 NF-YA4 EDA3 GTE01 ATNPSN11 GDCH AT2G35410 AT2G35840 AT2G36350 DML1 GAMMA-TIP MAT3 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37400 ATEXP3 AT2G37660 AKR4C10 CAC3 AtAUX1 PSRP4 ATLTP1 PDE328 PnsL1 RCA AteIF3f ELF4 ATFER4 AT2G40400 HEME2 ATKT2 ATEXP8 AT2G40660 ARR16 CYP98A3 AT2G41090 GPDHC1 AT2G41820 AT2G42130 AT2G42220 PDF1 AT2G43030 AT2G43090 BIO2 AT2G43560 COS1 MTHFR2 CHL-CPN10 CYCP4;1 AT2G44870 AT2G44920 AGP8 CYP76C1 AT2G45700 CPFTSY ATPMM ATHH2 CYP86A8 ATMPK12 SPA1 PSAP CER8 CP12 ATPDI11 PHR2 DEG2 PnsL3 ATBCA1 AT3G02640 EMB2768 ATF1 PDE326 PDE324 ATLTL1 emb2458 emb2171 TPR10 HEL AT3G04760 EMB3119 AT3G04840 ATNHX2 AT3G05470 RPL18 Encodes a defensin-like (DEFL) family protein. AT3G07310 ATYLMG1-1 AAC1 AT3G08740 LTP6 DEX1 PTAC13 AT3G09250 AT3G09440 AT3G09630 ADK1 AT3G09860 AT3G10020 OMR1 AtLCY LGO CYP77A6 GYRA LSF2 AT3G11560 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST DRT100 PGK1 AT3G12930 AT3G13120 WIP3 Cpn60beta2 ESM1 AT3G14220 ATPME3 PRPS20 ATMT3 ATHM4 AT3G15520 AT3G15570 ADS3 MFP1 AQP1 NDF4 EMB2083 AT3G16370 ATEBP AT3G16780 AAE7 AT3G17070 RFC3 POK1 RLK902 AT3G18050 AT3G18060 EMB1270 RACK1C MOS4 EMB1865 AtTic62 AT3G18940 POK2 ATPREP1 ATCAD4 CBB1 ATTCP-1 ATTOP6B AT3G21670 AT3G22210 ATWNK2 NET1A ARLIM15 PKP-ALPHA ATCFM3A AT3G23530 KINESIN-12B AT3G23700 ATSAHH2 ATTOPII AT3G23940 HSP60 ATMSH1 HCF101 ATMSH7 PLSP1 ERD2B ATFKBP62 ATL5 LAG1 AT3G25660 AtCHUP1 AT3G25805 LTA2 ATPRX CYP71B22 GAMMA-TIP2 ORF02 GAPA CCB1 CCL YSL6 ATTSO2 ATMDAR4 DAYSLEEPER AT3G43610 AT3G43670 LTPG2 RPL9 AT3G45850 H2B AT3G46630 MAR1 PTAC16 AT3G47070 ATNOA1 AT3G47650 EDD AT3G48200 ATBT2 AT3G48420 AT3G48460 PDE312 AHAS GSA2 ATPCA iqd21 RDR6 DIN11 ATBCAT-3 OEC33 AT3G51280 AT3G51290 ATSSL4 AT3G51720 ATEBP1 ATG4 AT3G52110 PSRP2 CP33 ACA1 FTSZ2-2 AtPIP2;1 AT3G53580 HCEF1 FLN1 AT3G54210 AT3G54400 HTA11 ATGR2 AMP1 LHCA1 PPL1 ATTSC13 ATDFD SBPASE UGP3 AT3G56160 AT3G56370 PSRP5 ACSF ATBZIP61 AT3G58140 AT3G58610 AT3G59780 MTHFR1 CUM2 AT3G60750 AT3G61870 CYP20-3 ATDUF7 CP12 ABCC14 CSP41A OEP6 AtcpRRF APG1 EMB3126 AT4G00165 ANTR2 AT4G00895 TROL AT4G01310 AGY1 GLB1 AT4G02530 PSAD-1 EMB3129 AT4G02850 BSM PETC ATHM2 ATPC1 ATMSRB6 PSBQ ATK5 SAPX APX4 ATPD ATSPS4F AT4G10300 LHCB5 AT4G11100 AT4G11175 CYP706A6 PSAL AtENODL19 NYC1 AT4G13840 SHM4 EDA38 AT4G14330 ATTCX2 FdC1 AO1 TUA6 CYP97B3 AT4G15545 IAGLU AtCLA1 AT4G15830 AT4G16155 AT4G16980 DELTA-TIP2 AT4G17390 AT4G17560 LIL3:1 AT4G17740 ATSS4 CH-42 RPL16B AT4G18970 AK-HSDH ATRAB8D AT4G20430 ATRP1 PSBQ ATML1 AKT2 PGR5-LIKE AT4G23740 3xHMG-box2 CRR31 AtHsp90-7 cpHsc70-1 AT4G24350 CER2 PGI AT4G24750 ATRBP31 AT4G24820 AT4G24830 AT4G24930 ACP4 CHLM ATFSD1 MSRA4 ACYB-2 B1 AT4G26370 AtFBA5 MAP65-2 AR192 ATPDI7 ATPHOS34 PORB NARA5 TET7 AT4G28080 PSB28 GrxC5 PSAE-1 AT4G28780 AT4G29020 emb2726 PFK1 AT4G29360 AT4G30020 AT4G30620 scpl29 FAD6 AtENODL15 PGR3 PDE334 AT4G32340 AT4G32530 AtGLDP1 AT4G33500 KUP5 ATBCA5 SEP1 ALDH3 ATCAP1 BLH6 SSR16 AT4G34730 MRL1 AT4G34950 CAT2 PIP2;7 HCF244 XCP1 LTO1 ALDH3F1 AT4G36390 AT4G36530 BEE2 MAP1D XTH7 NDH-M SHM1 pde191 ATROPGEF1 ATPRP4 AtFBA2 AT4G39040 ATCAD9 CYP96A12 PLAT1 AT4G39970 ATPDX1 LHCB4.1 AT5G01590 OHP AT5G02160 AT-HSC70-1 AT5G02870 ADK2 AT5G03850 54CP GYRB2 FD-GOGAT KCS19 AT5G05200 ATEIF2-A2 AtFAD8 ATEGY2 CYC1BAT 2-Cys WCRKC1 AT5G07020 EMS1 ATRPA70B AT5G08050 HEMC FTRA2 AtPPa6 PMDH2 AGP4 KAC1 PAS2 AT5G10920 OCP3 PPD5 AT5G11480 TUB6 DiT1 ATGSL12 AK EMB3136 ABAR CYL1 ATIMD1 EMB3137 BETA AT5G14910 GASA4 ATMIXTA BCCP2 AT5G16240 ATF2 DHAR3 ENH1 AT5G17630 AT5G17670 EMB1241 ATCBR ATCIMS CSD3 ATOBGC PCB2 EMB3013 TUA3 ATIPT9 ATGER3 ATCPN21 AT5G22340 AT5G22400 emb1211 EMB1030 H2B CDF1 HCF136 TUB8 DCR SQE5 ATSS1 APRR5 AtENODL13 CYP71B12 EBF2 AT5G25420 DGR2 AT5G25590 BGLU37 AtTGG1 ATIREG3 AT5G27290 BIP1 AT5G28750 ARRPS1 AT5G33370 AT5G35170 AMOS1 CAC2 ATGSL1 G6PD1 AT5G36160 ATPRFB AT5G37010 RBCS3B RBCS2B RBCS1B AT5G38520 APE1 CRR7 UDG4 AT5G39410 EMB2745 OLI7 EMB139 ATPHB3 RPS10B BIP ABIL4 FTSH5 AT5G42740 ARP9 NDH18 AGO10 ATTOM22-V AT5G44000 AT5G44520 CLPP4 AT5G45670 CHL AT5G45950 APE2 KAT1 KAS1 AT5G46420 BSK2 AT5G46580 TET1 LIL3:2 AT5G47190 AT5G47210 PME5 AT5G48360 AT5G48460 DIR1 FKBP15-2 AT5G48900 LPA66 EMB2812 OVA2 DDM2 ATFRO6 ATFRO7 cpHsc70-2 CPI1 CAA33 AT5G51110 DYAD AT5G51560 ATMAP65-3 At-NEET ATSBT1.3 ATPGMP HCF106 AT5G52780 AT5G52960 AT5G52970 FTSH11 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G54750 THI1 AT5G55220 ATFTSZ1-1 AT5G55520 FLA1 CRR21 AtHsp90.2 CSN6A GATA21 LUT2 AT5G57170 NdhN AT5G58330 AtcPT4 ATUCP2 HTA6 HTB4 RIP5 ATPDX2 AT5G60930 EMB2728 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. ALDH12A1 TUB3 AT5G62710 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. emb2746 ATFP3 GSA1 SHA1 CHR24 PSAN ATERS DCT JK218 AT5G64460 EMB3144 CLEL AT5G65220 KAC2 AT5G65840 ATLFNR1 AT5G66230 AT5G66470 GAMMA AT5G66530 MSP-1 ATDDM1 ABA1 RALFL34 RLK PSBA RPS16 ATPA ATPF ATPH ATPI PSBD PSBC RPS14 NDHJ PSBG NDHC ATPE ATPB RBCL ACCD PETA PSBE PETG PSAJ PSBB PETB PETD NDHF YCF5 NDHD PSAC NDHE NDHG NDHI NDHA NDHH YCF1.2"
GO:0019637
organophosphate metabolic process		BP1.612e-83AT1G01080 ATGPAT4 AT1G02150 POR ATHM1 AT1G04420 emb2394 EMB2784 AT1G07440 PSAO ALB-1V ABC1 AVDE1 AT1G09130 CRB ATFD1 CLPP6 AT1G12230 AT1G12800 AT1G13730 PnsL2 AT1G14270 AT1G14345 NDF1 FUG1 ATARCA AT1G18660 LHCA2*1 ATLFNR2 DRT112 AT1G22630 AOR AT1G28530 ACBP PRK AT1G32470 FdC2 PRPL11 GAPB AtcFBP RACK1B AT1G49380 GDC1 AT1G51110 ATMUM4 AtTLP18.3 PSAG AT1G60890 ATSCO1 AT1G62780 AT1G65230 AT1G66130 PSRP3/1 FLN2 HEMB1 PGM2 AT1G70820 AT1G74070 emb2184 LQY1 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21530 AT2G21960 SCPL8 AT2G24060 PRPL35 AT2G27680 HDA13 PY ATFC-II FTSH2 PRPL28 NF-YA4 EDA3 GDCH AT2G35410 AT2G37660 AT2G40660 GPDHC1 AT2G42130 AT2G43030 AT2G43560 AT2G44920 CPFTSY PSAP PHR2 DEG2 ATBCA1 EMB2768 ATF1 PDE326 EMB3119 AT3G04840 RPL18 ATYLMG1-1 PTAC13 AT3G09630 AT3G09860 GYRA Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 ATHM4 AT3G15520 ADS3 MFP1 NDF4 AT3G16780 RACK1C EMB1865 ATTCP-1 AT3G22210 AT3G23700 AT3G23940 HCF101 ATL5 AT3G25660 AT3G25805 LTA2 CCB1 ATTSO2 RPL9 PTAC16 ATNOA1 AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATEBP1 ATG4 PSRP2 CP33 FTSZ2-2 HCEF1 AT3G54210 PPL1 SBPASE ACSF AT3G58140 AT3G58610 AT3G59780 AT3G60750 AT3G61870 CYP20-3 CSP41A AtcpRRF APG1 EMB3126 ANTR2 AT4G00895 TROL AT4G01310 GLB1 AT4G02530 EMB3129 PETC ATPC1 APX4 ATPD AT4G10300 FdC1 CYP97B3 AtCLA1 AT4G17390 AT4G17560 LIL3:1 AT4G17740 CH-42 AK-HSDH AKT2 PGR5-LIKE PGI AT4G24750 AT4G24830 ACP4 CHLM AtFBA5 AR192 NARA5 AT4G28080 PSB28 emb2726 FAD6 PGR3 PDE334 AtGLDP1 SEP1 MRL1 HCF244 LTO1 AT4G36390 AtFBA2 AT4G39040 ATPDX1 AT5G02870 54CP ATEIF2-A2 ATEGY2 2-Cys AT5G08050 HEMC PMDH2 AT5G10920 PPD5 EMB3137 AT5G14910 ENH1 AT5G17670 PCB2 ATIPT9 ATCPN21 HCF136 ARRPS1 AT5G35170 ATGSL1 G6PD1 AT5G38520 UDG4 OLI7 GPDHp FTSH5 NDH18 AT5G44520 CLPP4 CHL AT5G47210 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 ATFTSZ1-1 CSN6A NdhN ATNDPK2 PSAN ATLFNR1 AT5G66470 GAMMA ABA1 ATPA ATPF ATPH ATPI ATPE ATPB NDHF NDHD NDHE
GO:0010207
photosystem II assembly		BP1.437e-80FZL PSB27 POR ATHM1 atTIC20 emb2394 OE23 PSAO CRB CLPP6 GAPA-2 AT1G14270 AT1G14345 NDF1 HCF173 AT1G19740 ATLFNR2 PRK AT1G32470 RPL21C GAPB CP22 Lhca5 AT1G52220 PSAH-2 AtTLP18.3 ATFD2 ATSCO1 AT1G63610 PSBY ATHPR1 PDE343 emb2184 AT1G75460 LQY1 PSBR PSB29 AtFBA1 AT2G21530 AT2G26500 PSBW FTSH2 ARASP DAL GDCH PnsL1 AT2G43030 AT2G43560 CPFTSY PSAP PSAH-1 PSBTN PLSP1 AtCHUP1 GAPA CCB1 AT3G47650 OEC33 HCEF1 PPL1 SBPASE ACSF AT3G61870 CSP41A TROL PSAD-1 PETC ATPC1 ATPD PSAL LIL3:1 PSBQ PGR5-LIKE ACP4 PSB28 PSAE-1 PDE334 SEP1 HCF244 LTO1 AtFBA2 OHP PMDH2 EMB3136 ENH1 CRR42 HCF136 AMOS1 ATPRFB AT5G38520 APE1 CRR7 CLPP4 AT5G51110 AT5G52780 AT5G52960 NdhN AT5G58330 ATLFNR1 MSP-1 PSBA PSBK PSBI ATPH PSBD PSBC NDHJ NDHC YCF4 PETA PSBL PETG RPS18 PSBB PSBH PETD NDHI NDHA
GO:1901564
organonitrogen compound metabolic proces...		BP4.350e-79FZL ATCPO-I POR ATHM1 emb2394 ATCTL1 OE23 EMB2784 AT1G07440 PSAO ALB-1V ABC1 AVDE1 AT1G09310 CRB ATATP-PRT2 ATFD1 MORF9 CLPP6 AT1G11860 AT1G12230 AT1G12800 PnsL2 AT1G14345 CP24 NDF1 ATARCA LHCA2*1 ATCLH1 ATLFNR2 DRT112 AT1G22630 AOAT1 AOR APT1 AT1G28530 PSAK ATIMD3 PSAF ATROPGEF14 AT1G31690 ACBP PRK AT1G32470 FdC2 PRPL11 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 GATB RACK1B GDC1 AT1G51110 PSAH-2 ABA2 AtTLP18.3 AGP21 AT1G55360 PSAG AT1G56050 AT1G56190 AT1G60000 LHCA3 ACO2 ATSCO1 AT1G62780 AT1G65230 ATKCR1 PSBY ATHPR1 AT1G68260 FLN2 HEMB1 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. emb2184 LQY1 ATGSTU20 PSBR RECA1 APT2 ATIMD2 WIN1 ABH1 AT2G17033 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PDTPI ATSULA AtFBA1 AT2G21530 AT2G21960 SCPL8 AT2G24060 PRPL35 AtGLDP2 ATHO1 AT2G27680 PY ATFC-II ATGSTF7 FTSH2 EDA3 GDCH AT2G35410 GAMMA-TIP MAT3 AT2G37660 PnsL1 AT2G40400 HEME2 ATKT2 AT2G40660 AT2G42220 AT2G43030 AT2G43090 BIO2 AT2G43560 COS1 MTHFR2 CHL-CPN10 AT2G44920 PSAP ATBCA1 EMB2768 ATF1 PDE326 EMB3119 AT3G04840 RPL18 ATYLMG1-1 AT3G08740 AT3G09630 ADK1 OMR1 GYRA Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 ATPME3 PRPS20 ATHM4 ADS3 MFP1 NDF4 AT3G16780 RACK1C CBB1 ATTCP-1 AT3G22210 AT3G23700 ATSAHH2 AT3G23940 HCF101 ATL5 LAG1 LTA2 ATPRX GAMMA-TIP2 AT3G43670 PTAC16 AT3G47650 EDD AT3G48200 AT3G48420 AHAS GSA2 ATBCAT-3 OEC33 ATSSL4 ATEBP1 ATG4 FTSZ2-2 AtPIP2;1 AT3G53580 HCEF1 AT3G54400 ATGR2 PPL1 ATTSC13 ATDFD SBPASE ACSF AT3G58140 AT3G58610 AT3G59780 MTHFR1 AT3G60750 AT3G61870 CYP20-3 CSP41A AtcpRRF EMB3126 ANTR2 AT4G00895 TROL AT4G01310 GLB1 AT4G02530 PSAD-1 PETC ATPC1 APX4 ATPD LHCB5 NYC1 SHM4 FdC1 AO1 IAGLU AtCLA1 AT4G17390 LIL3:1 CH-42 AK-HSDH PGR5-LIKE AT4G24350 CER2 ATRBP31 AT4G24830 CHLM MSRA4 ACYB-2 AT4G26370 AtFBA5 AR192 PORB PSAE-1 FAD6 PGR3 PDE334 AtGLDP1 KUP5 SEP1 LTO1 AT4G36390 SHM1 ATPRP4 AtFBA2 AT4G39040 ATPDX1 AT5G02870 ADK2 AT5G05200 ATEIF2-A2 2-Cys AT5G08050 HEMC AtPPa6 PMDH2 PAS2 AT5G10920 TUB6 DiT1 AK ABAR ATIMD1 AT5G14910 GASA4 ENH1 ATCIMS PCB2 ATIPT9 ATCPN21 AT5G22340 EMB1030 HCF136 ARRPS1 ATGSL1 G6PD1 AT5G36160 OLI7 FTSH5 AT5G44520 CHL APE2 AT5G46580 TET1 AT5G47210 OVA2 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52960 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. THI1 ATFTSZ1-1 GATA21 NdhN ATPDX2 ALDH12A1 ATNDPK2 GSA1 PSAN ATERS DCT ATLFNR1 GAMMA MSP-1 ATPA ATPF ATPH ATPI ATPE ATPB NDHF NDHD NDHE
GO:0042254
ribosome biogenesis		BP6.892e-76AT1G02150 emb2386 FZL ATCPO-I PSB27 POR ATHM1 emb2394 RHON1 OE23 PSAO ABC1 AVDE1 CRB MORF9 CLPP6 GAPA-2 ATARCA LHCA2*1 ATLFNR2 AT1G29070 PRK AT1G32470 PRPL11 RPL21C GAPB CP22 Lhca5 EMB3105 RACK1B AT1G52220 PSAH-2 AtTLP18.3 ATSCO1 AT1G64510 PSBY ATHPR1 FLN2 HEMB1 AT1G70200 PDE343 emb2184 LQY1 ATCAF1 PSB29 AtFBA1 AT2G21530 AT2G26500 PSBW FTSH2 DAL AT2G34480 GDCH AT2G35410 RPL24A AT2G37660 PDE328 LHCB4.3 AT2G43030 AT2G43560 CPFTSY PSAP AT3G06700 AT3G09200 AT3G13120 PRPS20 AT3G16080 PSAH-1 AT3G16780 RFC3 PSBTN AT3G22230 AT3G23700 HCF101 PLSP1 ATL5 AtCHUP1 ATPRX GAPA CCB1 GHS1 AT3G27180 RPL9 PTAC16 AT3G47070 ATNOA1 AT3G47650 GSA2 ATBBC1 OEC33 ATG4 AT3G53430 HCEF1 FLN1 LHCA1 PPL1 SBPASE ACSF AT3G60245 AT3G61870 AT3G62870 CSP41A TROL AT4G02530 PSAD-1 PETC ATPC1 APX4 ATPD LHCB5 PSAL FdC1 AT4G17560 LIL3:1 AT4G18100 CH-42 PSBQ PGR5-LIKE AT4G24750 ACP4 CHLM AT4G27090 PSAE-1 RPS6 PDE334 SEP1 SSR16 AT4G34730 HCF244 AtFBA2 LHCB4.1 AT5G03850 HEMC PMDH2 AT5G11480 EMB3136 EMB3137 AT5G16130 ENH1 ATOBGC PCB2 STT3A AT5G20290 AT5G22440 HCF136 ARRPS1 ATPRFB AT5G38520 OLI7 CLPP4 AT5G46420 AT5G47190 AT5G51110 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G56710 AT5G58330 EMB3144 AT5G65220 ATLFNR1 MSP-1
GO:0051186
cofactor metabolic process		BP3.519e-75ATCPO-I POR ATHM1 TOR2 emb2394 AT1G07440 PSAO ALB-1V ABC1 AVDE1 CRB ATFD1 AT1G12000 AT1G12230 AT1G12800 PnsL2 AT1G14345 NDF1 LHCA2*1 ATCLH1 ATLFNR2 DRT112 AT1G22630 AOR PRK AT1G32470 FdC2 PRPL11 EMB3003 GAPB AtBGAL5 GDC1 AT1G51110 AtTLP18.3 PSAG AT1G56050 ACLA-2 ATSCO1 AT1G62780 AT1G64650 AT1G65230 HEMB1 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. emb2184 AtGH9B7 LQY1 SPS1 ATIMD2 FLA7 ENR1 AGP9 ATSULA AtFBA1 AT2G21530 AT2G21960 SCPL8 PRPL35 ATHO1 AT2G27680 PY EMB3147 ATFC-II FTSH2 EDA3 GDCH AT2G35410 MAT3 AT2G37660 CAC3 AT2G40400 HEME2 AT2G43030 BIO2 AT2G43560 AT2G44920 PSAP ATBCA1 ATF1 PDE326 EMB3119 ATHST PGK1 AT3G13120 ESM1 PRPS20 ATHM4 ADS3 MFP1 NDF4 CBB1 AT3G22210 AT3G23700 HCF101 ERD2B LTA2 ATPRX PTAC16 AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 AT3G53580 HCEF1 PPL1 ATDFD SBPASE ACSF AT3G59780 AT3G61870 CYP20-3 CSP41A AtcpRRF APG1 EMB3126 ANTR2 TROL GLB1 AT4G02530 PETC ATPC1 ATK5 APX4 ATPD NYC1 FdC1 AtCLA1 LIL3:1 CH-42 PGR5-LIKE 3xHMG-box2 CHLM AtFBA5 PORB FAD6 AtENODL15 PGR3 PDE334 AtGLDP1 SEP1 LTO1 AtFBA2 ATPDX1 AT5G05200 2-Cys AT5G08050 HEMC FTRA2 PMDH2 TUB6 ABAR AT5G14910 ENH1 PCB2 HCF136 ARRPS1 CAC2 ATGSL1 G6PD1 FTSH5 AT5G44520 CHL CPI1 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. GATA21 NdhN AtcPT4 GSA1 PSAN ATLFNR1 GAMMA NDHE"
GO:0022613
ribonucleoprotein complex biogenesis		BP4.237e-75AT1G02150 emb2386 FZL ATCPO-I PSB27 POR ATHM1 emb2394 RHON1 OE23 PSAO ABC1 AVDE1 CRB MORF9 CLPP6 GAPA-2 ATARCA LHCA2*1 ATLFNR2 AT1G29070 PRK AT1G32470 PRPL11 RPL21C GAPB CP22 Lhca5 EMB3105 RACK1B AT1G52220 PSAH-2 AtTLP18.3 ATSCO1 AT1G64510 PSBY ATHPR1 FLN2 HEMB1 AT1G70200 PDE343 emb2184 LQY1 ATCAF1 PSB29 AtFBA1 AT2G21530 AT2G26500 PSBW FTSH2 DAL AT2G34480 GDCH AT2G35410 RPL24A AT2G37660 PDE328 LHCB4.3 AT2G43030 AT2G43560 CPFTSY PSAP AT3G06700 AT3G09200 AT3G13120 PRPS20 AT3G16080 PSAH-1 AT3G16780 RFC3 PSBTN AT3G22230 AT3G23700 HCF101 PLSP1 ATL5 AtCHUP1 ATPRX GAPA CCB1 GHS1 AT3G27180 RPL9 PTAC16 AT3G47070 ATNOA1 AT3G47650 GSA2 ATBBC1 OEC33 ATG4 AT3G53430 HCEF1 FLN1 LHCA1 PPL1 SBPASE ACSF AT3G60245 AT3G61870 AT3G62870 CSP41A TROL AT4G02530 PSAD-1 PETC ATPC1 APX4 ATPD LHCB5 PSAL FdC1 AT4G17560 LIL3:1 AT4G18100 CH-42 PSBQ PGR5-LIKE AT4G24750 ACP4 CHLM AT4G27090 PSAE-1 RPS6 PDE334 SEP1 SSR16 AT4G34730 HCF244 AtFBA2 LHCB4.1 AT5G03850 HEMC PMDH2 AT5G11480 EMB3136 EMB3137 AT5G16130 ENH1 ATOBGC PCB2 STT3A AT5G20290 AT5G22440 HCF136 ARRPS1 ATPRFB AT5G38520 OLI7 CLPP4 AT5G46420 AT5G47190 AT5G51110 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G56710 AT5G58330 EMB3144 AT5G65220 ATLFNR1 MSP-1
GO:0006733
oxidoreduction coenzyme metabolic proces...		BP4.193e-74POR ATHM1 emb2394 AT1G07440 PSAO ABC1 AVDE1 CRB ATFD1 AT1G12230 AT1G12800 PnsL2 AT1G14345 NDF1 LHCA2*1 ATLFNR2 DRT112 AT1G22630 AOR PRK AT1G32470 FdC2 GAPB GDC1 AT1G51110 PSAG ATSCO1 AT1G62780 AT1G65230 HEMB1 emb2184 LQY1 ATIMD2 ATSULA AtFBA1 AT2G21530 AT2G21960 SCPL8 PRPL35 AT2G27680 PY EMB3147 ATFC-II FTSH2 EDA3 GDCH CAC3 AT2G43560 AT2G44920 PSAP ATBCA1 ATF1 EMB3119 PGK1 ESM1 ATHM4 MFP1 NDF4 AT3G22210 AT3G23700 HCF101 LTA2 PTAC16 AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 AT3G53580 HCEF1 PPL1 SBPASE AT3G59780 AT3G61870 CYP20-3 CSP41A AtcpRRF EMB3126 ANTR2 TROL GLB1 AT4G02530 PETC ATPC1 APX4 ATPD FdC1 AtCLA1 LIL3:1 PGR5-LIKE AtFBA5 FAD6 PGR3 PDE334 AtGLDP1 SEP1 LTO1 AtFBA2 ATPDX1 2-Cys AT5G08050 HEMC PMDH2 AT5G14910 ENH1 PCB2 HCF136 ARRPS1 ATGSL1 G6PD1 FTSH5 AT5G44520 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 NdhN AtcPT4 PSAN ATLFNR1 GAMMA NDHE
GO:0008299
isoprenoid biosynthetic process		BP1.780e-73AT1G01080 AT1G02150 POR AT1G04420 emb2394 EMB2784 ALB-1V ABC1 AVDE1 AT1G09130 CRB Z-ISO ATFD1 CLPP6 AT1G11860 AT1G12800 AT1G14270 AT1G14345 NDF1 FUG1 AT1G18660 LHCA2*1 AOR FdC2 PRPL11 GAPB AT1G49380 GDC1 ABA2 AtTLP18.3 CPN60B AT1G57770 AT1G62780 BDG1 AT1G65230 ABA4 PSRP3/1 AT1G74070 emb2184 ATKS PSB29 PDTPI ATSULA AtFBA1 AT2G21385 SCPL8 AT2G24060 ATHO1 AT2G27680 PY ATFC-II ATCB5-B PRPL28 EDA3 AT2G35410 AT2G37660 AT2G42130 AT2G43030 AT2G43560 AT2G44920 CPFTSY PHR2 DEG2 ATF1 PDE326 EMB3119 PTAC13 AT3G09860 AtLCY Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST PGK1 AT3G12930 AT3G13120 ESM1 AT3G15520 ADS3 MFP1 NDF4 EMB1865 AT3G23700 HCF101 AT3G25805 LTA2 ATPRX ORF02 CCB1 RPL9 PTAC16 ATNOA1 AT3G47650 AT3G48420 ATG4 PSRP2 CP33 HCEF1 AT3G54210 SBPASE ACSF AT3G58140 AT3G59780 AT3G60750 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 TROL AT4G01310 GLB1 AT4G02530 EMB3129 ATPC1 APX4 ATPD AT4G10300 FdC1 CYP97B3 AtCLA1 AT4G17560 LIL3:1 CH-42 PGI AT4G24750 ACP4 CHLM B1 NARA5 AT4G28080 PSB28 emb2726 FAD6 PGR3 AtGLDP1 SEP1 MRL1 HCF244 LTO1 MAP1D AtFBA2 AT4G39040 54CP FD-GOGAT ATEGY2 AT5G07020 HEMC PMDH2 PPD5 EMB3137 AT5G14910 PCB2 ATCPN21 HCF136 SQE5 ARRPS1 G6PD1 NDH18 CLPP4 CHL OVA2 ATPGMP AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 LUT2 NdhN AtcPT4 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ATNDPK2 AT5G66470 ABA1 NDHE
GO:0022607
cellular component assembly		BP4.431e-73FZL PSB27 POR ATHM1 AtTPX2 TOR2 atTIC20 emb2394 RHON1 OE23 AT1G06760 HTB1 AT1G07820 PSAO CRB MORF9 CLPP6 GAPA-2 AT1G14270 AT1G14345 CENP-C NDF1 HCF173 AT1G19740 TUB5 ATLFNR2 PRK AT1G32470 RPL21C GAPB CP22 Lhca5 AT1G49380 TUA2 UBC20 GDC1 HTA10 AT1G52220 PSAH-2 AIN1 G-H2AX AtTLP18.3 ATFD2 ATSCO1 AT1G63610 PSBY ATHPR1 ARC12 AtCPB AT1G72480 NRP1 AT1G74800 PDE343 emb2184 AT1G75460 LQY1 TUB1 PSBR OTP51 AT2G17033 PSB29 AtFBA1 AT2G21530 IAA8 AT2G24060 AT2G26500 CH-CPN60A AT2G28720 HIS4 ATEXP6 TUB7 KIS PSBW AT2G30620 FTSH2 ARASP DAL AIR9 GDCH AtAUX1 PnsL1 ATFER4 ATOEP16-3 AT2G43030 BIO2 AT2G43560 CPFTSY PSAP EMB2768 AAC1 AT3G08740 DEX1 AT3G12930 PSAH-1 EMB1270 ATTOP6B ATNFU2 PSBTN ARLIM15 KINESIN-12B ATTOPII HSP60 HCF101 PLSP1 AtCHUP1 LTA2 GAPA CCB1 AT3G27360 AT3G43610 AT3G45850 AT3G45930 H2B HTB11 AT3G46320 ATNOA1 AT3G47650 OEC33 AT3G51290 CP33 FTSZ2-2 AT3G53730 HCEF1 FLN1 PPL1 SBPASE ACSF AT3G61870 ATDUF7 CSP41A AtcpRRF EMB3126 TROL PSAD-1 PETC ATPC1 ATK5 ATPD PSAL TUA6 AT4G15830 AT4G16450 LIL3:1 PSBQ ATML1 PGR5-LIKE ATRBP31 AT4G24820 ACP4 AT4G26370 MAP65-2 TET7 PSB28 GrxC5 PSAE-1 AT4G30020 AtENODL15 PDE334 SEP1 SSR16 AT4G34730 HCF244 LTO1 AT4G36390 NDH-M pde191 AtFBA2 AT4G39040 OHP 54CP ATEGY2 PMDH2 AT5G10400 KAC1 AT5G11480 TUB6 EMB3136 ENH1 EMB3013 TUA3 CRR42 AT5G22340 emb1211 H2B HCF136 TUB8 AMOS1 ATPRFB AT5G38520 APE1 CRR7 ABIL4 AtCEST CLPP4 AT5G46580 AT5G47190 LPA66 OVA2 CPI1 AT5G51110 ATMAP65-3 AT5G52780 AT5G52960 AT5G52970 ATFTSZ1-1 AT5G55520 CSN6A NdhN AT5G58330 AT5G59690 HTA6 HTB4 TUB3 AT5G65360 ATLFNR1 AT5G66470 GAMMA MSP-1 PSBA PSBK PSBI ATPH PSBD PSBC YCF3 NDHJ NDHC YCF4 PETA PSBL PETG RPS18 PSBB PSBH PETD YCF5 NDHI NDHA
GO:0008654
phospholipid biosynthetic process		BP6.810e-73AT1G01080 ATGPAT4 AT1G02150 POR AT1G04420 emb2394 EMB2784 ALB-1V ABC1 AVDE1 AT1G09130 CRB CLPP6 AT1G12800 AT1G14270 AT1G14345 FUG1 AT1G18660 LHCA2*1 AOR FdC2 PRPL11 GAPB AT1G49380 GDC1 AtTLP18.3 AT1G62780 AT1G65230 PSRP3/1 AT1G74070 emb2184 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 SCPL8 AT2G24060 AT2G27680 PY ATFC-II PRPL28 EDA3 AT2G35410 AT2G37660 AT2G42130 AT2G43030 AT2G43560 AT2G44920 CPFTSY PHR2 DEG2 EMB2768 ATF1 PDE326 EMB3119 PTAC13 AT3G09860 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 AT3G15520 ADS3 MFP1 NDF4 EMB1865 AT3G23700 HCF101 AT3G25660 AT3G25805 LTA2 CCB1 RPL9 ATNOA1 AT3G47650 ATG4 PSRP2 CP33 AT3G54210 SBPASE ACSF AT3G58140 AT3G59780 AT3G60750 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 TROL AT4G01310 GLB1 AT4G02530 EMB3129 ATPC1 APX4 ATPD AT4G10300 FdC1 CYP97B3 AtCLA1 AT4G17560 LIL3:1 AT4G17740 CH-42 PGI AT4G24750 ACP4 CHLM NARA5 AT4G28080 PSB28 emb2726 FAD6 PGR3 AtGLDP1 SEP1 MRL1 HCF244 LTO1 AT4G36390 AtFBA2 AT4G39040 54CP ATEGY2 HEMC PMDH2 PPD5 EMB3137 AT5G14910 PCB2 ATCPN21 ARRPS1 G6PD1 NDH18 CLPP4 CHL ATPGMP AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 ATNDPK2 AT5G66470 NDHE
GO:0034660
ncRNA metabolic process		BP2.726e-72AT1G02150 FZL ATCPO-I PSB27 POR ATHM1 emb2394 RHON1 OE23 PSAO ABC1 AVDE1 CRB MORF9 CLPP6 AT1G12800 GAPA-2 FUG1 LHCA2*1 ATLFNR2 PRK AT1G32470 PRPL11 RPL21C GAPB CP22 Lhca5 GATB AT1G52220 PSAH-2 AIN1 AtTLP18.3 ATSCO1 AT1G62780 AT1G65230 PSBY ATHPR1 FLN2 HEMB1 AT1G70200 PDE343 emb2184 LQY1 ABH1 ATCAF1 PSB29 AtFBA1 AT2G21530 AT2G26500 AT2G27680 PSBW FTSH2 PRORP1 DAL EDA3 GDCH AT2G35410 AT2G37660 PDE328 LHCB4.3 AT2G40660 AT2G43030 AT2G43560 CPFTSY PSAP EMB2768 PTAC13 AT3G13120 PRPS20 MFP1 PSAH-1 EMB1865 PSBTN AT3G23700 HCF101 PLSP1 AtCHUP1 ATPRX GAPA CCB1 AT3G27180 PTAC16 AT3G47070 ATNOA1 AT3G47650 EDD GSA2 OEC33 ATG4 HCEF1 FLN1 LHCA1 PPL1 SBPASE ACSF AT3G58140 AT3G61870 CSP41A EMB3126 TROL AT4G02530 PSAD-1 EMB3129 BSM PETC ATPC1 APX4 ATPD LHCB5 PSAL FdC1 LIL3:1 CH-42 PSBQ PGR5-LIKE AT4G24750 ACP4 CHLM NARA5 PSAE-1 emb2726 RPS6 PGR3 PDE334 SEP1 AT4G34730 MRL1 HCF244 AT4G36390 AtFBA2 LHCB4.1 AT5G07020 HEMC PMDH2 AT5G11480 EMB3136 AT5G16130 ENH1 ATOBGC PCB2 STT3A ATIPT9 AT5G20290 AT5G22440 EMB1030 HCF136 ARRPS1 ATPRFB AT5G38520 AGO10 CLPP4 AT5G46420 OVA2 AT5G51110 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G55220 AT5G58330 ATERS EMB3144 ATLFNR1 MSP-1
GO:0006720
isoprenoid metabolic process		BP6.108e-72AT1G01080 AT1G02150 POR AT1G04420 emb2394 EMB2784 ALB-1V ABC1 AVDE1 AT1G09130 CRB Z-ISO ATFD1 CLPP6 AT1G11860 AT1G12800 AT1G14270 AT1G14345 NDF1 FUG1 AT1G18660 LHCA2*1 AOR FdC2 PRPL11 GAPB AT1G49380 GDC1 ABA2 AtTLP18.3 CPN60B AT1G57770 AT1G62780 BDG1 AT1G65230 ABA4 PSRP3/1 AT1G74070 emb2184 ATKS XERICO PSB29 PDTPI ATSULA AtFBA1 AT2G21385 SCPL8 AT2G24060 ATHO1 AT2G27680 PY ATFC-II ATCB5-B PRPL28 EDA3 AT2G35410 AT2G37660 AT2G42130 AT2G43030 AT2G43560 AT2G44920 CPFTSY PHR2 DEG2 ATF1 PDE326 EMB3119 PTAC13 AT3G09860 AtLCY Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST PGK1 AT3G12930 AT3G13120 ESM1 AT3G15520 ADS3 MFP1 NDF4 EMB1865 AT3G23700 HCF101 AT3G25805 LTA2 ATPRX ORF02 CCB1 RPL9 PTAC16 ATNOA1 AT3G47650 AT3G48420 ATG4 PSRP2 CP33 HCEF1 AT3G54210 SBPASE ACSF AT3G58140 AT3G59780 AT3G60750 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 TROL AT4G01310 GLB1 AT4G02530 EMB3129 ATPC1 APX4 ATPD AT4G10300 FdC1 CYP97B3 AtCLA1 AT4G17560 LIL3:1 CH-42 PGI AT4G24750 ACP4 CHLM B1 NARA5 AT4G28080 PSB28 emb2726 FAD6 PGR3 AtGLDP1 SEP1 MRL1 HCF244 LTO1 MAP1D AtFBA2 AT4G39040 54CP FD-GOGAT ATEGY2 AT5G07020 HEMC PMDH2 PPD5 EMB3137 AT5G14910 PCB2 ATCPN21 HCF136 SQE5 ARRPS1 G6PD1 NDH18 CLPP4 CHL OVA2 ATPGMP AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 LUT2 NdhN AtcPT4 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ATNDPK2 AT5G66470 ABA1 NDHE
GO:0006807
nitrogen compound metabolic process		BP1.368e-71AT1G01320 AT1G02150 IMPA-6 ATCSLD5 emb2386 FZL ATCPO-I PSB27 POR ATHM1 AtTPX2 emb2394 ATCTL1 ORA59 RHON1 OE23 EMB2784 AT1G07440 PSAO ALB-1V ABC1 AVDE1 AT1G09310 CRB ATATP-PRT2 ARR4 ATFD1 MORF9 CLPP6 AT1G11860 AT1G12000 AT1G12230 AT1G12800 ICE2 GAPA-2 AT1G13730 PnsL2 RPL10 AT1G14345 ATWHY1 CENP-C CP24 NDF1 FUG1 ATARCA AT1G18540 LHCA2*1 BES1 ATCLH1 ATLFNR2 DRT112 AT1G22630 FB AOAT1 ATCAF2 AOR MLP423 BBX15 APT1 AT1G28530 PSAK ATIMD3 PSAF ATROPGEF14 AT1G31690 ACBP PRK AT1G32470 FdC2 PRPL11 ATPS1 ARF20 RPL21C expressed protein localized to the inner membrane of the chloroplast. GAPB ARP1 CYCA1;1 CP22 Lhca5 GATB RACK1B AT1G49010 AT1G49380 UBC20 GDC1 AT1G51110 AT1G52220 PSAH-2 ABA2 AT1G52510 ATMUM4 AIN1 AT1G54500 G-H2AX AtTLP18.3 AT1G55140 AGP21 AT1G55360 PSAG AT1G56050 AT1G56190 AT1G60000 AT1G60590 LHCA3 ACO2 ATSCO1 AT1G62780 RPOD1 AT1G65230 ATKCR1 PSBY ATHPR1 ADO3 AT1G68260 BBX14 FLN2 HEMB1 CMT3 AT1G70200 AT1G70820 AT1G72250 ATHDG11 BEE3 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PDE343 emb2184 AT1G75460 LQY1 ATGSTU20 AT1G78995 PSBR RECA1 APT2 ATIMD2 WIN1 ARR14 WRKY3 ABH1 OTP51 AT2G16365 PFU2 AT2G17033 AT2G17972 HBI1 SCY1 AT2G19870 ATCAF1 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI ATSULA AtFBA1 AT2G21530 AT2G21960 IAA8 SCPL8 AT2G24060 PRPL35 AtGLDP2 AT2G26500 ATHO1 AT2G27680 HDA13 ATPCNA2 PY AT2G30320 ATFC-II PSBW ATGSTF7 FTSH2 AT2G32060 PRORP1 ATCOP1 AT2G33370 DAL HMR NF-YA4 EDA3 GTE01 GDCH AT2G35410 AT2G36350 DML1 RPL24A GAMMA-TIP MAT3 AT2G37660 PDE328 PnsL1 LHCB4.3 AT2G40400 HEME2 ATKT2 AT2G40660 ARR16 AT2G42220 AT2G43030 AT2G43090 BIO2 AT2G43560 COS1 AT2G44120 MTHFR2 CHL-CPN10 AT2G44920 AT2G45700 CPFTSY SPA1 PSAP PHR2 ATBCA1 EMB2768 ATF1 PDE326 PDE324 EMB3119 AT3G04840 RPL18 AT3G06700 AT3G07110 ATYLMG1-1 AT3G08740 AT3G09200 PTAC13 AT3G09250 AT3G09630 ADK1 OMR1 LGO GYRA AT3G11510 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 ATPME3 PRPS20 ATHM4 AT3G15520 ADS3 MFP1 AT3G16080 PSAH-1 NDF4 ATEBP AT3G16780 POK1 RACK1C MOS4 EMB1865 AtTic62 CBB1 ATTCP-1 ATTOP6B PSBTN AT3G22150 AT3G22210 ARLIM15 ATCFM3A AT3G23700 ATSAHH2 ATTOPII AT3G23940 ATMSH1 HCF101 ATMSH7 PLSP1 ATL5 LAG1 AtCHUP1 LTA2 RPL15 ATPRX GAMMA-TIP2 GAPA CCB1 ATTSO2 AT3G27180 AT3G43670 PTAC16 AT3G47070 AT3G47370 ATNOA1 AT3G47650 EDD AT3G48200 ATBT2 AT3G48420 PDE312 AHAS GSA2 ATBBC1 RDR6 ATBCAT-3 OEC33 AT3G51280 AT3G51290 ATSSL4 ATEBP1 ATG4 FTSZ2-2 AtPIP2;1 AT3G53430 CP29 AT3G53580 HCEF1 FLN1 AT3G54400 HTA11 ATGR2 LHCA1 PPL1 ATTSC13 ATDFD SBPASE ACSF ATBZIP61 AT3G58140 AT3G58610 AT3G59780 MTHFR1 CUM2 AT3G60750 AT3G61870 CYP20-3 ATDUF7 AT3G62870 CSP41A OEP6 AtcpRRF EMB3126 ANTR2 AT4G00895 TROL AT4G01310 GLB1 AT4G02530 PSAD-1 EMB3129 AT4G02840 BSM PETC ATPC1 ATK5 APX4 ATPD LHCB5 AT4G11100 AT4G11175 PSAL AT4G12830 NYC1 SHM4 AT4G14330 ATTCX2 FdC1 AO1 AT4G15000 IAGLU AtCLA1 AT4G17390 AT4G17560 LIL3:1 CH-42 AK-HSDH MORF1 PSBQ ATML1 PGR5-LIKE AT4G24350 CER2 AT4G24750 ATRBP31 AT4G24820 AT4G24830 ACP4 CHLM MSRA4 ACYB-2 AT4G26370 AtFBA5 MAP65-2 AR192 AT4G27090 PORB NARA5 AT4G28080 PSAE-1 AT4G28780 emb2726 AT4G29360 AT4G30825 FAD6 RPS6 PGR3 PDE334 AT4G32340 AtGLDP1 KUP5 SEP1 BLH6 SSR16 AT4G34730 MRL1 HCF244 LTO1 AT4G36390 BEE2 SHM1 pde191 ATPRP4 AtFBA2 AT4G39040 ATPDX1 LHCB4.1 AT5G02160 AT5G02870 ADK2 54CP GYRB2 BTR1 AT5G05200 ATEIF2-A2 2-Cys AT5G07020 ATRPA70B AT5G08050 HEMC FTRA2 AT5G09510 AtPPa6 PMDH2 PAS2 AT5G10920 OCP3 PPD5 AT5G11480 TUB6 DiT1 ATGSL12 AK EMB3136 ABAR SVR3 ATIMD1 EMB3137 AT5G14910 GASA4 ATMIXTA AT5G16130 ENH1 ATCIMS ATOBGC PCB2 STT3A ATIPT9 AT5G20290 ATCPN21 CRR42 AT5G22340 AT5G22440 EMB1030 HCF136 AT5G23650 APRR5 AT5G25590 ARRPS1 AT5G35170 ATGSL1 G6PD1 AT5G36160 ATPRFB AT5G37010 AT5G38520 CRR7 UDG4 OLI7 ATPHB3 FTSH5 AGO10 AT5G44520 CLPP4 CHL APE2 AT5G46420 AT5G46580 TET1 AT5G47190 AT5G47210 NF-YB2 AT5G48360 LPA66 EMB2812 OVA2 DDM2 AT5G51110 DYAD ATMAP65-3 At-NEET ATPGMP AT5G52780 AT5G52960 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. THI1 AT5G55220 ATFTSZ1-1 CRR21 CSN6A AT5G56670 AT5G56850 GATA21 NdhN AT5G58330 AT5G59850 ATPDX2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ALDH12A1 ATNDPK2 GSA1 SHA1 CHR24 PSAN ATERS DCT EMB3144 AT5G65220 KAC2 ATLFNR1 AT5G66470 GAMMA MSP-1 ATDDM1 PSBA MATK RPS16 RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBE ORF31 PETG PSAJ RPL33 RPS18 RPL20 CLPP1 PSBB PSBT PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 NDHF RPL32 YCF5 NDHD PSAC NDHE NDHG NDHI NDHA RPS15
GO:0006793
phosphorus metabolic process		BP4.036e-71AT1G01080 ATGPAT4 AT1G02150 PSAD-2 FZL PSB27 POR ATHM1 AtTPX2 AT1G04420 TOR2 emb2394 OE23 EMB2784 AT1G07440 PSAO ALB-1V ABC1 AVDE1 AT1G09130 CRB ARR4 ATFD1 CLPP6 AT1G12000 AT1G12230 AT1G12460 AT1G12800 GAPA-2 AT1G13730 PnsL2 AT1G14270 AT1G14345 CENP-C CP24 NDF1 HCF173 FUG1 ATARCA ATNACK1 AT1G18660 LHCA2*1 ATCLH1 ATLFNR2 DRT112 AT1G22630 AOR AT1G28530 ACBP PRK AT1G32160 AT1G32470 FdC2 PRPL11 EMB3003 RPL21C GAPB AtcFBP CYCA1;1 AtBGAL5 RKL1 RACK1B AT1G49380 GDC1 AT1G51110 AT1G52220 PSAH-2 ATMUM4 AtTLP18.3 AT1G54820 PSAG ACLA-2 AT1G60890 ATSCO1 AT1G62780 AT1G64650 AT1G65230 AT1G66130 PSBY ATHPR1 BBX14 PSRP3/1 FLN2 HEMB1 CMT3 PGM2 AT1G70820 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PDE343 emb2184 AT1G75460 AtGH9B7 LQY1 AHK4 FLA7 ENR1 AGP9 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21530 AT2G21960 SCPL8 AT2G24060 PRPL35 AtENODL14 ER CYCB1;4 AT2G27680 HDA13 PY ATFC-II FTSH2 DAL PRPL28 NF-YA4 EDA3 GDCH AT2G35410 AT2G36350 AT2G37660 RCA AT2G40660 ATCBK3 GPDHC1 AT2G41820 AT2G42130 AT2G43030 BIO2 AT2G43560 AT2G44920 CPFTSY ATMPK12 SPA1 PSAP PHR2 DEG2 ATBCA1 AT3G02640 EMB2768 ATF1 PDE326 EMB3119 AT3G04840 RPL18 ATYLMG1-1 PTAC13 AT3G09630 AT3G09860 GYRA LSF2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 SPA3 ATHM4 AT3G15520 ADS3 MFP1 NDF4 AT3G16780 RLK902 RACK1C EMB1865 CBB1 ATTCP-1 PSBTN AT3G22210 ATWNK2 AT3G23700 ATTOPII AT3G23940 ATMSH1 HCF101 PLSP1 ERD2B ATL5 AT3G25660 AtCHUP1 AT3G25805 LTA2 CCB1 ATTSO2 RPL9 PTAC16 ATNOA1 AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATSSL4 ATEBP1 ATG4 PSRP2 CP33 FTSZ2-2 HCEF1 AT3G54210 PPL1 SBPASE AT3G56370 ACSF AT3G58140 AT3G58610 AT3G59780 AT3G60750 AT3G61870 CYP20-3 CSP41A AtcpRRF APG1 EMB3126 ANTR2 AT4G00895 TROL AT4G01310 GLB1 AT4G02530 PSAD-1 EMB3129 PETC ATPC1 ATK5 APX4 ATPD AT4G10300 AT4G14480 FdC1 CYP97B3 AT4G15545 AtCLA1 AT4G17390 AT4G17560 LIL3:1 AT4G17740 CH-42 AK-HSDH PSBQ AKT2 PGR5-LIKE AT4G23740 3xHMG-box2 CRR31 PGI AT4G24750 AT4G24830 ACP4 CHLM AtFBA5 MAP65-2 AR192 NARA5 AT4G28080 PSB28 emb2726 FAD6 AtENODL15 PGR3 PDE334 AtGLDP1 AT4G33500 SEP1 MRL1 HCF244 LTO1 AT4G36390 AtFBA2 AT4G39040 ATPDX1 STN8 AT5G02870 54CP ATEIF2-A2 ATEGY2 CYC1BAT 2-Cys EMS1 AT5G08050 HEMC AtPPa6 PMDH2 PAS2 AT5G10920 PPD5 SSP5 TUB6 EMB3136 EMB3137 BETA AT5G14910 ENH1 AT5G17670 PCB2 EMB3013 ATIPT9 ATCPN21 HCF136 ARRPS1 AT5G35170 CAC2 ATGSL1 G6PD1 ATPRFB AT5G37010 AT5G38520 UDG4 OLI7 GPDHp FTSH5 NDH18 AT5G44520 CLPP4 CHL APE2 BSK2 AT5G47210 PME5 CPI1 AT5G51110 AT5G51560 ATMAP65-3 At-NEET ATPGMP AT5G52780 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 THI1 AT5G55220 ATFTSZ1-1 AT5G55520 CSN6A AT5G56890 NdhN AT5G62710 ATNDPK2 SHA1 PSAN JK218 ATLFNR1 AT5G66470 GAMMA MSP-1 ATDDM1 ABA1 RLK ATPA ATPF ATPH ATPI ATPE ATPB NDHF NDHD NDHE"
GO:0006739
NADP metabolic process		BP2.720e-70POR ATHM1 emb2394 AT1G07440 PSAO ABC1 AVDE1 CRB ATFD1 AT1G12230 AT1G12800 PnsL2 AT1G14345 NDF1 LHCA2*1 ATLFNR2 DRT112 AT1G22630 PRK AT1G32470 FdC2 GAPB GDC1 AT1G51110 PSAG ATSCO1 AT1G62780 AT1G65230 HEMB1 emb2184 LQY1 ATSULA AtFBA1 AT2G21530 AT2G21960 PRPL35 AT2G27680 PY ATFC-II FTSH2 EDA3 GDCH AT2G43560 AT2G44920 PSAP ATBCA1 ATF1 EMB3119 PGK1 ESM1 ATHM4 MFP1 NDF4 AT3G22210 AT3G23700 HCF101 PTAC16 AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G59780 AT3G61870 CSP41A AtcpRRF EMB3126 ANTR2 AT4G02530 PETC APX4 ATPD FdC1 LIL3:1 PGR5-LIKE AtFBA5 PGR3 PDE334 AtGLDP1 SEP1 LTO1 AtFBA2 ATPDX1 2-Cys AT5G08050 HEMC PMDH2 AT5G14910 ENH1 PCB2 HCF136 ARRPS1 ATGSL1 G6PD1 FTSH5 AT5G44520 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 NdhN PSAN ATLFNR1 GAMMA
GO:0006098
pentose-phosphate shunt		BP6.864e-70POR ATHM1 emb2394 AT1G07440 PSAO ABC1 AVDE1 CRB ATFD1 AT1G12230 AT1G12800 PnsL2 AT1G14345 NDF1 LHCA2*1 ATLFNR2 DRT112 AT1G22630 PRK AT1G32470 FdC2 GAPB GDC1 AT1G51110 ATSCO1 AT1G62780 AT1G65230 HEMB1 emb2184 LQY1 ATSULA AtFBA1 AT2G21530 AT2G21960 PRPL35 AT2G27680 PY ATFC-II FTSH2 EDA3 GDCH AT2G43560 AT2G44920 PSAP ATBCA1 ATF1 EMB3119 PGK1 ESM1 ATHM4 MFP1 NDF4 AT3G22210 AT3G23700 HCF101 PTAC16 AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G59780 AT3G61870 CSP41A AtcpRRF EMB3126 ANTR2 AT4G02530 PETC APX4 ATPD FdC1 LIL3:1 PGR5-LIKE AtFBA5 PGR3 PDE334 AtGLDP1 SEP1 LTO1 AtFBA2 ATPDX1 2-Cys AT5G08050 HEMC PMDH2 AT5G14910 ENH1 PCB2 HCF136 ARRPS1 ATGSL1 G6PD1 FTSH5 AT5G44520 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 NdhN PSAN ATLFNR1 GAMMA
GO:0051156
glucose 6-phosphate metabolic process		BP6.864e-70POR ATHM1 emb2394 AT1G07440 PSAO ABC1 AVDE1 CRB ATFD1 AT1G12230 AT1G12800 PnsL2 AT1G14345 NDF1 LHCA2*1 ATLFNR2 DRT112 AT1G22630 PRK AT1G32470 FdC2 GAPB GDC1 AT1G51110 ATSCO1 AT1G62780 AT1G65230 HEMB1 emb2184 LQY1 ATSULA AtFBA1 AT2G21530 AT2G21960 PRPL35 AT2G27680 PY ATFC-II FTSH2 EDA3 GDCH AT2G43560 AT2G44920 PSAP ATBCA1 ATF1 EMB3119 PGK1 ESM1 ATHM4 MFP1 NDF4 AT3G22210 AT3G23700 HCF101 PTAC16 AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G59780 AT3G61870 CSP41A AtcpRRF EMB3126 ANTR2 AT4G02530 PETC APX4 ATPD FdC1 LIL3:1 PGR5-LIKE AtFBA5 PGR3 PDE334 AtGLDP1 SEP1 LTO1 AtFBA2 ATPDX1 2-Cys AT5G08050 HEMC PMDH2 AT5G14910 ENH1 PCB2 HCF136 ARRPS1 ATGSL1 G6PD1 FTSH5 AT5G44520 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 NdhN PSAN ATLFNR1 GAMMA
GO:0046496
nicotinamide nucleotide metabolic proces...		BP2.080e-69POR ATHM1 emb2394 AT1G07440 PSAO ABC1 AVDE1 CRB ATFD1 AT1G12230 AT1G12800 PnsL2 AT1G14345 NDF1 LHCA2*1 ATLFNR2 DRT112 AT1G22630 PRK AT1G32470 FdC2 GAPB GDC1 AT1G51110 PSAG ATSCO1 AT1G62780 AT1G65230 HEMB1 emb2184 LQY1 ATSULA AtFBA1 AT2G21530 AT2G21960 PRPL35 AT2G27680 PY ATFC-II FTSH2 EDA3 GDCH AT2G43560 AT2G44920 PSAP ATBCA1 ATF1 EMB3119 PGK1 ESM1 ATHM4 MFP1 NDF4 AT3G22210 AT3G23700 HCF101 PTAC16 AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G59780 AT3G61870 CSP41A AtcpRRF EMB3126 ANTR2 AT4G02530 PETC APX4 ATPD FdC1 LIL3:1 PGR5-LIKE AtFBA5 PGR3 PDE334 AtGLDP1 SEP1 LTO1 AtFBA2 ATPDX1 2-Cys AT5G08050 HEMC PMDH2 AT5G14910 ENH1 PCB2 HCF136 ARRPS1 ATGSL1 G6PD1 FTSH5 AT5G44520 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 NdhN PSAN ATLFNR1 GAMMA
GO:0070271
protein complex biogenesis		BP2.223e-69FZL PSB27 POR ATHM1 AtTPX2 TOR2 atTIC20 emb2394 OE23 AT1G06760 HTB1 AT1G07820 PSAO CRB CLPP6 GAPA-2 AT1G14270 AT1G14345 CENP-C NDF1 HCF173 AT1G19740 TUB5 ATLFNR2 PRK AT1G32470 RPL21C GAPB CP22 Lhca5 AT1G49380 TUA2 UBC20 HTA10 AT1G52220 PSAH-2 AIN1 G-H2AX AtTLP18.3 ATFD2 ATSCO1 AT1G63610 RBCS1A PSBY ATHPR1 AtCPB AT1G72480 NRP1 AT1G74800 PDE343 emb2184 AT1G75460 LQY1 TUB1 PSBR OTP51 PSB29 AtFBA1 AT2G21530 IAA8 AT2G26500 AT2G28720 HIS4 ATEXP6 TUB7 KIS PSBW AT2G30620 FTSH2 ARASP DAL AIR9 GDCH AtAUX1 PnsL1 ATOEP16-3 AT2G43030 BIO2 AT2G43560 CPFTSY PSAP AAC1 PSAH-1 EMB1270 ATTOP6B PSBTN ATTOPII HSP60 PLSP1 AtCHUP1 LTA2 GAPA CCB1 AT3G27360 AT3G43610 AT3G45850 AT3G45930 H2B HTB11 AT3G46320 AT3G47650 OEC33 AT3G51290 FTSZ2-2 AT3G53730 HCEF1 PPL1 SBPASE ACSF AT3G61870 ATDUF7 CSP41A TROL PSAD-1 PETC ATPC1 ATK5 ATPD PSAL TUA6 AT4G15830 AT4G16450 LIL3:1 PSBQ PGR5-LIKE AT4G24820 ACP4 MAP65-2 TET7 PSB28 PSAE-1 AT4G30020 AtENODL15 PDE334 SEP1 HCF244 LTO1 NDH-M AtFBA2 OHP 54CP PMDH2 AT5G10400 TUB6 EMB3136 ENH1 TUA3 CRR42 H2B HCF136 TUB8 AMOS1 ATPRFB RBCS3B AT5G38520 APE1 CRR7 ABIL4 AtCEST CLPP4 LPA66 CPI1 AT5G51110 ATMAP65-3 AT5G52780 AT5G52960 ATFTSZ1-1 AT5G55520 CSN6A NdhN AT5G58330 AT5G59690 HTA6 HTB4 TUB3 AT5G65360 ATLFNR1 GAMMA MSP-1 PSBA PSBK PSBI ATPH PSBD PSBC YCF3 NDHJ NDHC YCF4 PETA PSBL PETG RPS18 PSBB PSBH PETD YCF5 NDHI NDHA
GO:0006364
rRNA processing		BP2.809e-69AT1G02150 FZL ATCPO-I PSB27 POR ATHM1 emb2394 RHON1 OE23 PSAO ABC1 AVDE1 CRB MORF9 CLPP6 GAPA-2 LHCA2*1 ATLFNR2 PRK AT1G32470 PRPL11 RPL21C GAPB CP22 Lhca5 AT1G52220 PSAH-2 AtTLP18.3 ATSCO1 PSBY ATHPR1 FLN2 HEMB1 AT1G70200 PDE343 emb2184 LQY1 ATCAF1 PSB29 AtFBA1 AT2G21530 AT2G26500 PSBW FTSH2 DAL GDCH AT2G35410 AT2G37660 PDE328 LHCB4.3 AT2G43030 AT2G43560 CPFTSY PSAP AT3G13120 PRPS20 PSAH-1 PSBTN AT3G23700 HCF101 PLSP1 AtCHUP1 ATPRX GAPA CCB1 AT3G27180 PTAC16 AT3G47070 ATNOA1 AT3G47650 GSA2 OEC33 ATG4 HCEF1 FLN1 LHCA1 PPL1 SBPASE ACSF AT3G61870 CSP41A TROL AT4G02530 PSAD-1 PETC ATPC1 APX4 ATPD LHCB5 PSAL FdC1 LIL3:1 CH-42 PSBQ PGR5-LIKE AT4G24750 ACP4 CHLM PSAE-1 RPS6 PDE334 SEP1 AT4G34730 HCF244 AtFBA2 LHCB4.1 HEMC PMDH2 AT5G11480 EMB3136 AT5G16130 ENH1 ATOBGC PCB2 STT3A AT5G20290 AT5G22440 HCF136 ARRPS1 ATPRFB AT5G38520 CLPP4 AT5G46420 AT5G51110 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G58330 EMB3144 ATLFNR1 MSP-1
GO:0016072
rRNA metabolic process		BP2.809e-69AT1G02150 FZL ATCPO-I PSB27 POR ATHM1 emb2394 RHON1 OE23 PSAO ABC1 AVDE1 CRB MORF9 CLPP6 GAPA-2 LHCA2*1 ATLFNR2 PRK AT1G32470 PRPL11 RPL21C GAPB CP22 Lhca5 AT1G52220 PSAH-2 AtTLP18.3 ATSCO1 PSBY ATHPR1 FLN2 HEMB1 AT1G70200 PDE343 emb2184 LQY1 ATCAF1 PSB29 AtFBA1 AT2G21530 AT2G26500 PSBW FTSH2 DAL GDCH AT2G35410 AT2G37660 PDE328 LHCB4.3 AT2G43030 AT2G43560 CPFTSY PSAP AT3G13120 PRPS20 PSAH-1 PSBTN AT3G23700 HCF101 PLSP1 AtCHUP1 ATPRX GAPA CCB1 AT3G27180 PTAC16 AT3G47070 ATNOA1 AT3G47650 GSA2 OEC33 ATG4 HCEF1 FLN1 LHCA1 PPL1 SBPASE ACSF AT3G61870 CSP41A TROL AT4G02530 PSAD-1 PETC ATPC1 APX4 ATPD LHCB5 PSAL FdC1 LIL3:1 CH-42 PSBQ PGR5-LIKE AT4G24750 ACP4 CHLM PSAE-1 RPS6 PDE334 SEP1 AT4G34730 HCF244 AtFBA2 LHCB4.1 HEMC PMDH2 AT5G11480 EMB3136 AT5G16130 ENH1 ATOBGC PCB2 STT3A AT5G20290 AT5G22440 HCF136 ARRPS1 ATPRFB AT5G38520 CLPP4 AT5G46420 AT5G51110 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G58330 EMB3144 ATLFNR1 MSP-1
GO:0019362
pyridine nucleotide metabolic process		BP5.647e-69POR ATHM1 emb2394 AT1G07440 PSAO ABC1 AVDE1 CRB ATFD1 AT1G12230 AT1G12800 PnsL2 AT1G14345 NDF1 LHCA2*1 ATLFNR2 DRT112 AT1G22630 PRK AT1G32470 FdC2 GAPB GDC1 AT1G51110 PSAG ATSCO1 AT1G62780 AT1G65230 HEMB1 emb2184 LQY1 ATSULA AtFBA1 AT2G21530 AT2G21960 PRPL35 AT2G27680 PY ATFC-II FTSH2 EDA3 GDCH AT2G43560 AT2G44920 PSAP ATBCA1 ATF1 EMB3119 PGK1 ESM1 ATHM4 MFP1 NDF4 AT3G22210 AT3G23700 HCF101 PTAC16 AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G59780 AT3G61870 CSP41A AtcpRRF EMB3126 ANTR2 AT4G02530 PETC APX4 ATPD FdC1 LIL3:1 PGR5-LIKE AtFBA5 PGR3 PDE334 AtGLDP1 SEP1 LTO1 AtFBA2 ATPDX1 2-Cys AT5G08050 HEMC PMDH2 AT5G14910 ENH1 PCB2 HCF136 ARRPS1 ATGSL1 G6PD1 FTSH5 AT5G44520 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 NdhN PSAN ATLFNR1 GAMMA
GO:0072524
pyridine-containing compound metabolic p...		BP1.539e-68POR ATHM1 emb2394 AT1G07440 PSAO ABC1 AVDE1 CRB ATFD1 AT1G12230 AT1G12800 PnsL2 AT1G14345 NDF1 LHCA2*1 ATLFNR2 DRT112 AT1G22630 PRK AT1G32470 FdC2 GAPB GDC1 AT1G51110 PSAG ATSCO1 AT1G62780 AT1G65230 HEMB1 emb2184 LQY1 ATSULA AtFBA1 AT2G21530 AT2G21960 PRPL35 AT2G27680 PY ATFC-II FTSH2 EDA3 GDCH AT2G43560 AT2G44920 PSAP ATBCA1 ATF1 EMB3119 PGK1 ESM1 ATHM4 MFP1 NDF4 AT3G22210 AT3G23700 HCF101 PTAC16 AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G59780 AT3G61870 CSP41A AtcpRRF EMB3126 ANTR2 AT4G02530 PETC APX4 ATPD FdC1 LIL3:1 PGR5-LIKE AtFBA5 PGR3 PDE334 AtGLDP1 SEP1 LTO1 AtFBA2 ATPDX1 2-Cys AT5G08050 HEMC PMDH2 AT5G14910 ENH1 PCB2 HCF136 ARRPS1 ATGSL1 G6PD1 FTSH5 AT5G44520 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 NdhN ATPDX2 PSAN ATLFNR1 GAMMA
GO:0006461
protein complex assembly		BP2.716e-68FZL PSB27 POR ATHM1 AtTPX2 TOR2 atTIC20 emb2394 OE23 AT1G06760 HTB1 AT1G07820 PSAO CRB CLPP6 GAPA-2 AT1G14270 AT1G14345 CENP-C NDF1 HCF173 AT1G19740 TUB5 ATLFNR2 PRK AT1G32470 RPL21C GAPB CP22 Lhca5 AT1G49380 TUA2 UBC20 HTA10 AT1G52220 PSAH-2 AIN1 G-H2AX AtTLP18.3 ATFD2 ATSCO1 AT1G63610 PSBY ATHPR1 AtCPB AT1G72480 NRP1 AT1G74800 PDE343 emb2184 AT1G75460 LQY1 TUB1 PSBR OTP51 PSB29 AtFBA1 AT2G21530 IAA8 AT2G26500 AT2G28720 HIS4 ATEXP6 TUB7 KIS PSBW AT2G30620 FTSH2 ARASP DAL AIR9 GDCH AtAUX1 PnsL1 ATOEP16-3 AT2G43030 BIO2 AT2G43560 CPFTSY PSAP AAC1 PSAH-1 EMB1270 ATTOP6B PSBTN ATTOPII HSP60 PLSP1 AtCHUP1 LTA2 GAPA CCB1 AT3G27360 AT3G43610 AT3G45850 AT3G45930 H2B HTB11 AT3G46320 AT3G47650 OEC33 AT3G51290 FTSZ2-2 AT3G53730 HCEF1 PPL1 SBPASE ACSF AT3G61870 ATDUF7 CSP41A TROL PSAD-1 PETC ATPC1 ATK5 ATPD PSAL TUA6 AT4G15830 AT4G16450 LIL3:1 PSBQ PGR5-LIKE AT4G24820 ACP4 MAP65-2 TET7 PSB28 PSAE-1 AT4G30020 AtENODL15 PDE334 SEP1 HCF244 LTO1 NDH-M AtFBA2 OHP 54CP PMDH2 AT5G10400 TUB6 EMB3136 ENH1 TUA3 CRR42 H2B HCF136 TUB8 AMOS1 ATPRFB AT5G38520 APE1 CRR7 ABIL4 AtCEST CLPP4 LPA66 CPI1 AT5G51110 ATMAP65-3 AT5G52780 AT5G52960 ATFTSZ1-1 AT5G55520 CSN6A NdhN AT5G58330 AT5G59690 HTA6 HTB4 TUB3 AT5G65360 ATLFNR1 GAMMA MSP-1 PSBA PSBK PSBI ATPH PSBD PSBC YCF3 NDHJ NDHC YCF4 PETA PSBL PETG RPS18 PSBB PSBH PETD YCF5 NDHI NDHA
GO:0006732
coenzyme metabolic process		BP1.229e-67POR ATHM1 TOR2 emb2394 AT1G07440 PSAO ABC1 AVDE1 CRB ATFD1 AT1G12000 AT1G12230 AT1G12800 PnsL2 AT1G14345 NDF1 LHCA2*1 ATLFNR2 DRT112 AT1G22630 AOR PRK AT1G32470 FdC2 EMB3003 GAPB AtBGAL5 GDC1 AT1G51110 PSAG ACLA-2 ATSCO1 AT1G62780 AT1G64650 AT1G65230 HEMB1 emb2184 AtGH9B7 LQY1 SPS1 ATIMD2 FLA7 ENR1 AGP9 ATSULA AtFBA1 AT2G21530 AT2G21960 SCPL8 PRPL35 AT2G27680 PY EMB3147 ATFC-II FTSH2 EDA3 GDCH MAT3 CAC3 BIO2 AT2G43560 AT2G44920 PSAP ATBCA1 ATF1 EMB3119 ATHST PGK1 ESM1 ATHM4 MFP1 NDF4 CBB1 AT3G22210 AT3G23700 HCF101 ERD2B LTA2 PTAC16 AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 AT3G53580 HCEF1 PPL1 ATDFD SBPASE AT3G59780 AT3G61870 CYP20-3 CSP41A AtcpRRF APG1 EMB3126 ANTR2 TROL GLB1 AT4G02530 PETC ATPC1 ATK5 APX4 ATPD FdC1 AtCLA1 LIL3:1 PGR5-LIKE 3xHMG-box2 AtFBA5 FAD6 AtENODL15 PGR3 PDE334 AtGLDP1 SEP1 LTO1 AtFBA2 ATPDX1 2-Cys AT5G08050 HEMC FTRA2 PMDH2 TUB6 AT5G14910 ENH1 PCB2 HCF136 ARRPS1 CAC2 ATGSL1 G6PD1 FTSH5 AT5G44520 CPI1 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 NdhN AtcPT4 PSAN ATLFNR1 GAMMA NDHE
GO:0006644
phospholipid metabolic process		BP2.039e-67AT1G01080 ATGPAT4 AT1G02150 POR AT1G04420 emb2394 EMB2784 ALB-1V ABC1 AVDE1 AT1G09130 CRB CLPP6 AT1G12800 AT1G14270 AT1G14345 FUG1 AT1G18660 LHCA2*1 AOR FdC2 PRPL11 GAPB AT1G49380 GDC1 AtTLP18.3 AT1G60890 AT1G62780 AT1G65230 PSRP3/1 AT1G74070 emb2184 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 SCPL8 AT2G24060 AT2G27680 PY ATFC-II PRPL28 EDA3 AT2G35410 AT2G37660 AT2G42130 AT2G43030 AT2G43560 AT2G44920 CPFTSY PHR2 DEG2 EMB2768 ATF1 PDE326 EMB3119 PTAC13 AT3G09860 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 AT3G15520 ADS3 MFP1 NDF4 EMB1865 AT3G23700 HCF101 AT3G25660 AT3G25805 LTA2 CCB1 RPL9 ATNOA1 AT3G47650 ATG4 PSRP2 CP33 AT3G54210 SBPASE ACSF AT3G58140 AT3G59780 AT3G60750 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 TROL AT4G01310 GLB1 AT4G02530 EMB3129 ATPC1 APX4 ATPD AT4G10300 FdC1 CYP97B3 AtCLA1 AT4G17560 LIL3:1 AT4G17740 CH-42 PGI AT4G24750 ACP4 CHLM NARA5 AT4G28080 PSB28 emb2726 FAD6 PGR3 AtGLDP1 SEP1 MRL1 HCF244 LTO1 AT4G36390 AtFBA2 AT4G39040 54CP ATEGY2 HEMC PMDH2 PPD5 EMB3137 AT5G14910 AT5G17670 PCB2 ATCPN21 ARRPS1 G6PD1 NDH18 CLPP4 CHL ATPGMP AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 ATNDPK2 AT5G66470 NDHE
GO:0006796
phosphate-containing compound metabolic ...		BP1.718e-66AT1G01080 ATGPAT4 AT1G02150 PSAD-2 FZL PSB27 POR ATHM1 AtTPX2 AT1G04420 emb2394 OE23 EMB2784 AT1G07440 PSAO ALB-1V ABC1 AVDE1 AT1G09130 CRB ARR4 ATFD1 CLPP6 AT1G12230 AT1G12460 AT1G12800 GAPA-2 AT1G13730 PnsL2 AT1G14270 AT1G14345 CENP-C CP24 NDF1 HCF173 FUG1 ATARCA ATNACK1 AT1G18660 LHCA2*1 ATCLH1 ATLFNR2 DRT112 AT1G22630 AOR AT1G28530 ACBP PRK AT1G32160 AT1G32470 FdC2 PRPL11 RPL21C GAPB AtcFBP CYCA1;1 RKL1 RACK1B AT1G49380 GDC1 AT1G51110 AT1G52220 PSAH-2 ATMUM4 AtTLP18.3 AT1G54820 PSAG AT1G60890 ATSCO1 AT1G62780 AT1G65230 AT1G66130 PSBY ATHPR1 BBX14 PSRP3/1 FLN2 HEMB1 CMT3 PGM2 AT1G70820 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PDE343 emb2184 AT1G75460 LQY1 AHK4 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21530 AT2G21960 SCPL8 AT2G24060 PRPL35 AtENODL14 ER CYCB1;4 AT2G27680 HDA13 PY ATFC-II FTSH2 DAL PRPL28 NF-YA4 EDA3 GDCH AT2G35410 AT2G36350 AT2G37660 RCA AT2G40660 ATCBK3 GPDHC1 AT2G41820 AT2G42130 AT2G43030 AT2G43560 AT2G44920 CPFTSY ATMPK12 SPA1 PSAP PHR2 DEG2 ATBCA1 AT3G02640 EMB2768 ATF1 PDE326 EMB3119 AT3G04840 RPL18 ATYLMG1-1 PTAC13 AT3G09630 AT3G09860 GYRA LSF2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 SPA3 ATHM4 AT3G15520 ADS3 MFP1 NDF4 AT3G16780 RLK902 RACK1C EMB1865 ATTCP-1 PSBTN AT3G22210 ATWNK2 AT3G23700 ATTOPII AT3G23940 ATMSH1 HCF101 PLSP1 ATL5 AT3G25660 AtCHUP1 AT3G25805 LTA2 CCB1 ATTSO2 RPL9 PTAC16 ATNOA1 AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATSSL4 ATEBP1 ATG4 PSRP2 CP33 FTSZ2-2 HCEF1 AT3G54210 PPL1 SBPASE AT3G56370 ACSF AT3G58140 AT3G58610 AT3G59780 AT3G60750 AT3G61870 CYP20-3 CSP41A AtcpRRF APG1 EMB3126 ANTR2 AT4G00895 TROL AT4G01310 GLB1 AT4G02530 PSAD-1 EMB3129 PETC ATPC1 ATK5 APX4 ATPD AT4G10300 AT4G14480 FdC1 CYP97B3 AT4G15545 AtCLA1 AT4G17390 AT4G17560 LIL3:1 AT4G17740 CH-42 AK-HSDH PSBQ AKT2 PGR5-LIKE AT4G23740 3xHMG-box2 CRR31 PGI AT4G24750 AT4G24830 ACP4 CHLM AtFBA5 MAP65-2 AR192 NARA5 AT4G28080 PSB28 emb2726 FAD6 PGR3 PDE334 AtGLDP1 AT4G33500 SEP1 MRL1 HCF244 LTO1 AT4G36390 AtFBA2 AT4G39040 ATPDX1 STN8 AT5G02870 54CP ATEIF2-A2 ATEGY2 CYC1BAT 2-Cys EMS1 AT5G08050 HEMC AtPPa6 PMDH2 PAS2 AT5G10920 PPD5 SSP5 EMB3136 EMB3137 BETA AT5G14910 ENH1 AT5G17670 PCB2 EMB3013 ATIPT9 ATCPN21 HCF136 ARRPS1 AT5G35170 ATGSL1 G6PD1 ATPRFB AT5G37010 AT5G38520 UDG4 OLI7 GPDHp FTSH5 NDH18 AT5G44520 CLPP4 CHL APE2 BSK2 AT5G47210 PME5 AT5G51110 AT5G51560 ATMAP65-3 At-NEET ATPGMP AT5G52780 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 THI1 AT5G55220 ATFTSZ1-1 AT5G55520 CSN6A AT5G56890 NdhN AT5G62710 ATNDPK2 SHA1 PSAN JK218 ATLFNR1 AT5G66470 GAMMA MSP-1 ATDDM1 ABA1 RLK ATPA ATPF ATPH ATPI ATPE ATPB NDHF NDHD NDHE
GO:0034622
cellular macromolecular complex assembly		BP2.563e-66FZL PSB27 POR ATHM1 AtTPX2 TOR2 atTIC20 emb2394 OE23 AT1G06760 HTB1 AT1G07820 PSAO CRB CLPP6 GAPA-2 AT1G14270 AT1G14345 NDF1 HCF173 AT1G19740 TUB5 ATLFNR2 PRK AT1G32470 RPL21C GAPB CP22 Lhca5 AT1G49380 TUA2 UBC20 HTA10 AT1G52220 PSAH-2 AIN1 G-H2AX AtTLP18.3 ATFD2 ATSCO1 AT1G63610 PSBY ATHPR1 AtCPB AT1G72480 NRP1 AT1G74800 PDE343 emb2184 AT1G75460 LQY1 TUB1 PSBR OTP51 PSB29 AtFBA1 AT2G21530 IAA8 AT2G26500 AT2G28720 HIS4 ATEXP6 TUB7 KIS PSBW AT2G30620 FTSH2 ARASP DAL AIR9 GDCH AtAUX1 PnsL1 ATOEP16-3 AT2G43030 BIO2 AT2G43560 CPFTSY PSAP AAC1 PSAH-1 EMB1270 ATTOP6B PSBTN HSP60 PLSP1 AtCHUP1 LTA2 GAPA CCB1 AT3G27360 AT3G43610 AT3G45850 AT3G45930 H2B HTB11 AT3G46320 AT3G47650 OEC33 FTSZ2-2 AT3G53730 HCEF1 PPL1 SBPASE ACSF AT3G61870 CSP41A TROL PSAD-1 PETC ATPC1 ATK5 ATPD PSAL TUA6 AT4G16450 LIL3:1 PSBQ PGR5-LIKE AT4G24820 ACP4 MAP65-2 TET7 PSB28 PSAE-1 AT4G30020 PDE334 SEP1 HCF244 LTO1 NDH-M AtFBA2 OHP 54CP PMDH2 AT5G10400 TUB6 EMB3136 ENH1 TUA3 CRR42 H2B HCF136 TUB8 AMOS1 ATPRFB AT5G38520 APE1 CRR7 ABIL4 AtCEST CLPP4 LPA66 CPI1 AT5G51110 ATMAP65-3 AT5G52780 AT5G52960 ATFTSZ1-1 CSN6A NdhN AT5G58330 AT5G59690 HTA6 HTB4 TUB3 AT5G65360 ATLFNR1 GAMMA MSP-1 PSBA PSBK PSBI ATPH PSBD PSBC YCF3 NDHJ NDHC YCF4 PETA PSBL PETG RPS18 PSBB PSBH PETD YCF5 NDHI NDHA
GO:0065003
macromolecular complex assembly		BP1.975e-65FZL PSB27 POR ATHM1 AtTPX2 TOR2 atTIC20 emb2394 OE23 AT1G06760 HTB1 AT1G07820 PSAO CRB CLPP6 GAPA-2 AT1G14270 AT1G14345 CENP-C NDF1 HCF173 AT1G19740 TUB5 ATLFNR2 PRK AT1G32470 RPL21C GAPB CP22 Lhca5 AT1G49380 TUA2 UBC20 HTA10 AT1G52220 PSAH-2 AIN1 G-H2AX AtTLP18.3 ATFD2 ATSCO1 AT1G63610 PSBY ATHPR1 AtCPB AT1G72480 NRP1 AT1G74800 PDE343 emb2184 AT1G75460 LQY1 TUB1 PSBR OTP51 PSB29 AtFBA1 AT2G21530 IAA8 AT2G26500 AT2G28720 HIS4 ATEXP6 TUB7 KIS PSBW AT2G30620 FTSH2 ARASP DAL AIR9 GDCH AtAUX1 PnsL1 ATOEP16-3 AT2G43030 BIO2 AT2G43560 CPFTSY PSAP AAC1 PSAH-1 EMB1270 ATTOP6B PSBTN ATTOPII HSP60 PLSP1 AtCHUP1 LTA2 GAPA CCB1 AT3G27360 AT3G43610 AT3G45850 AT3G45930 H2B HTB11 AT3G46320 AT3G47650 OEC33 AT3G51290 FTSZ2-2 AT3G53730 HCEF1 PPL1 SBPASE ACSF AT3G61870 ATDUF7 CSP41A TROL PSAD-1 PETC ATPC1 ATK5 ATPD PSAL TUA6 AT4G15830 AT4G16450 LIL3:1 PSBQ PGR5-LIKE AT4G24820 ACP4 MAP65-2 TET7 PSB28 PSAE-1 AT4G30020 AtENODL15 PDE334 SEP1 HCF244 LTO1 NDH-M AtFBA2 OHP 54CP PMDH2 AT5G10400 TUB6 EMB3136 ENH1 TUA3 CRR42 H2B HCF136 TUB8 AMOS1 ATPRFB AT5G38520 APE1 CRR7 ABIL4 AtCEST CLPP4 LPA66 CPI1 AT5G51110 ATMAP65-3 AT5G52780 AT5G52960 ATFTSZ1-1 AT5G55520 CSN6A NdhN AT5G58330 AT5G59690 HTA6 HTB4 TUB3 AT5G65360 ATLFNR1 GAMMA MSP-1 PSBA PSBK PSBI ATPH PSBD PSBC YCF3 NDHJ NDHC YCF4 PETA PSBL PETG RPS18 PSBB PSBH PETD YCF5 NDHI NDHA
GO:0034470
ncRNA processing		BP2.487e-65AT1G02150 FZL ATCPO-I PSB27 POR ATHM1 emb2394 RHON1 OE23 PSAO ABC1 AVDE1 CRB MORF9 CLPP6 GAPA-2 LHCA2*1 ATLFNR2 PRK AT1G32470 PRPL11 RPL21C GAPB CP22 Lhca5 AT1G52220 PSAH-2 AtTLP18.3 ATSCO1 PSBY ATHPR1 FLN2 HEMB1 AT1G70200 PDE343 emb2184 LQY1 ABH1 ATCAF1 PSB29 AtFBA1 AT2G21530 AT2G26500 PSBW FTSH2 PRORP1 DAL GDCH AT2G35410 AT2G37660 PDE328 LHCB4.3 AT2G43030 AT2G43560 CPFTSY PSAP AT3G13120 PRPS20 PSAH-1 PSBTN AT3G23700 HCF101 PLSP1 AtCHUP1 ATPRX GAPA CCB1 AT3G27180 PTAC16 AT3G47070 ATNOA1 AT3G47650 GSA2 OEC33 ATG4 HCEF1 FLN1 LHCA1 PPL1 SBPASE ACSF AT3G58140 AT3G61870 CSP41A TROL AT4G02530 PSAD-1 PETC ATPC1 APX4 ATPD LHCB5 PSAL FdC1 LIL3:1 CH-42 PSBQ PGR5-LIKE AT4G24750 ACP4 CHLM PSAE-1 RPS6 PDE334 SEP1 AT4G34730 HCF244 AT4G36390 AtFBA2 LHCB4.1 HEMC PMDH2 AT5G11480 EMB3136 AT5G16130 ENH1 ATOBGC PCB2 STT3A ATIPT9 AT5G20290 AT5G22440 HCF136 ARRPS1 ATPRFB AT5G38520 CLPP4 AT5G46420 AT5G51110 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G58330 EMB3144 ATLFNR1 MSP-1
GO:0071822
protein complex subunit organization		BP4.186e-64FZL PSB27 POR ATHM1 AtTPX2 TOR2 atTIC20 emb2394 OE23 AT1G06760 HTB1 AT1G07820 PSAO CRB CLPP6 GAPA-2 AT1G14270 AT1G14345 CENP-C NDF1 HCF173 AT1G19740 TUB5 ATLFNR2 PRK AT1G32470 RPL21C GAPB CP22 Lhca5 AT1G49380 TUA2 UBC20 HTA10 AT1G52220 PSAH-2 AIN1 G-H2AX AtTLP18.3 ATFD2 ATSCO1 AT1G63610 PSBY ATHPR1 AtCPB AT1G72480 NRP1 AT1G74800 PDE343 emb2184 AT1G75460 LQY1 TUB1 PSBR SKU6 OTP51 PSB29 AtFBA1 AT2G21530 IAA8 AT2G26500 AT2G28720 HIS4 ATEXP6 TUB7 KIS PSBW AT2G30620 FTSH2 ARASP DAL AIR9 GDCH AtAUX1 PnsL1 ATOEP16-3 AT2G43030 BIO2 AT2G43560 CPFTSY PSAP AAC1 PSAH-1 EMB1270 ATTOP6B PSBTN ATTOPII HSP60 PLSP1 AtCHUP1 LTA2 GAPA CCB1 AT3G27360 AT3G43610 AT3G45850 AT3G45930 H2B HTB11 AT3G46320 AT3G47650 OEC33 AT3G51290 FTSZ2-2 AT3G53730 HCEF1 PPL1 SBPASE ACSF AT3G61870 ATDUF7 CSP41A TROL PSAD-1 PETC ATPC1 ATK5 ATPD PSAL TUA6 AT4G15830 AT4G16450 LIL3:1 PSBQ PGR5-LIKE AT4G24820 ACP4 MAP65-2 TET7 PSB28 PSAE-1 AT4G30020 AtENODL15 PDE334 SEP1 HCF244 LTO1 NDH-M AtFBA2 OHP 54CP PMDH2 AT5G10400 TUB6 EMB3136 ENH1 TUA3 CRR42 H2B HCF136 TUB8 AMOS1 ATPRFB AT5G38520 APE1 CRR7 ABIL4 AtCEST CLPP4 LPA66 CPI1 AT5G51110 ATMAP65-3 AT5G52780 AT5G52960 ATFTSZ1-1 AT5G55520 CSN6A NdhN AT5G58330 AT5G59690 HTA6 HTB4 TUB3 AT5G65360 ATLFNR1 GAMMA MSP-1 PSBA PSBK PSBI ATPH PSBD PSBC YCF3 NDHJ NDHC YCF4 PETA PSBL PETG RPS18 PSBB PSBH PETD YCF5 NDHI NDHA
GO:0090407
organophosphate biosynthetic process		BP6.805e-64AT1G01080 ATGPAT4 AT1G02150 POR AT1G04420 emb2394 EMB2784 ALB-1V ABC1 AVDE1 AT1G09130 CRB CLPP6 AT1G12230 AT1G12800 AT1G13730 AT1G14270 AT1G14345 FUG1 ATARCA AT1G18660 LHCA2*1 AOR AT1G28530 ACBP FdC2 PRPL11 GAPB RACK1B AT1G49380 GDC1 ATMUM4 AtTLP18.3 AT1G62780 AT1G65230 AT1G66130 PSRP3/1 FLN2 AT1G70820 AT1G74070 emb2184 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 SCPL8 AT2G24060 AT2G27680 HDA13 PY ATFC-II PRPL28 NF-YA4 EDA3 AT2G35410 AT2G37660 AT2G40660 AT2G42130 AT2G43030 AT2G43560 AT2G44920 CPFTSY PHR2 DEG2 EMB2768 ATF1 PDE326 EMB3119 AT3G04840 RPL18 ATYLMG1-1 PTAC13 AT3G09630 AT3G09860 GYRA Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 AT3G15520 ADS3 MFP1 NDF4 AT3G16780 RACK1C EMB1865 ATTCP-1 AT3G23700 AT3G23940 HCF101 ATL5 AT3G25660 AT3G25805 LTA2 CCB1 ATTSO2 RPL9 ATNOA1 AT3G47650 ATEBP1 ATG4 PSRP2 CP33 AT3G54210 SBPASE ACSF AT3G58140 AT3G58610 AT3G59780 AT3G60750 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 AT4G00895 TROL AT4G01310 GLB1 AT4G02530 EMB3129 ATPC1 APX4 ATPD AT4G10300 FdC1 CYP97B3 AtCLA1 AT4G17390 AT4G17560 LIL3:1 AT4G17740 CH-42 AK-HSDH AKT2 PGI AT4G24750 AT4G24830 ACP4 CHLM AR192 NARA5 AT4G28080 PSB28 emb2726 FAD6 PGR3 PDE334 AtGLDP1 SEP1 MRL1 HCF244 LTO1 AT4G36390 AtFBA2 AT4G39040 ATPDX1 AT5G02870 54CP ATEIF2-A2 ATEGY2 HEMC PMDH2 AT5G10920 PPD5 EMB3137 AT5G14910 PCB2 ATIPT9 ATCPN21 ARRPS1 G6PD1 AT5G38520 UDG4 OLI7 GPDHp NDH18 AT5G44520 CLPP4 CHL AT5G47210 ATPGMP AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 ATFTSZ1-1 CSN6A ATNDPK2 AT5G66470 ABA1 ATPA ATPF ATPH ATPI ATPE ATPB NDHE
GO:0043170
macromolecule metabolic process		BP3.114e-63AT1G01100 AT1G01320 ATGPAT4 ATSBT1.1 AT1G02150 IMPA-6 ATCSLD5 emb2386 PSAD-2 FZL ATCPO-I PSB27 POR ATHM1 AtTPX2 AtSDD1 RPS15 PDLP2 AT1G04800 TOR2 ATPDI10 emb2394 ATCTL1 ORA59 RHON1 OE23 EMB2784 AT1G07440 RPS15A AT1G08360 PSAO ABC1 AVDE1 AT1G09130 AtCRT1b CRB AT1G09590 AT1G09690 AT1G09750 ATATP-PRT2 ARR4 MORF9 CLPP6 AT1G12000 AT1G12460 AT1G12800 ICE2 GAPA-2 MAP1B AT1G14270 RPL10 ATWHY1 CPN10 ATDEF1 CENP-C CP24 HCF173 FUG1 ATARCA ATNACK1 AT1G18540 AT1G18660 LHCA2*1 BES1 ATCLH1 AT1G19740 TUB5 ATLFNR2 DRT112 AT1G21740 LYM1 AT1G22630 FB ATPIN7 RPL27A ATCAF2 MLP423 BBX15 AT1G27120 AT1G29070 AT1G30600 AT1G30690 PRK AT1G32160 AT1G32470 PRPL11 PGY2 ATPS1 ARF20 RPL21C GAPB ARP1 Aty2 AtcFBP CYCA1;1 CP22 Lhca5 EMB3105 RKL1 GATB RACK1B AT1G49010 AT1G49380 ATPREP2 UBC20 AT1G52220 PSAH-2 AT1G52510 mMDH1 ATMUM4 AIN1 AT1G54500 G-H2AX AtTLP18.3 AT1G54820 AT1G55140 CPN60B PSAG AT1G56190 ATSAR1 AtCRT1a AT1G60590 ATSCO1 AT1G62780 AT1G64510 BDG1 RPOD1 AT1G65230 PSBY ATHPR1 ADO3 BBX14 ATXYL1 PSRP3/1 FLN2 HEMB1 CMT3 AMY3 AT1G70200 AT1G70600 PGM2 AT1G70820 AT1G72250 ATHDG11 AT1G73655 BEE3 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G74800 PDE343 RPS9 emb2184 AT1G75460 AtGH9B7 LQY1 TUB1 ATGSTU20 emb1473 AT1G78995 RECA1 EMB1047 CS17 ARR14 AHK4 ARPN WRKY3 SKU6 AtHsp90.5 AT2G04700 ABH1 OTP51 AT2G16365 PFU2 AT2G17972 HBI1 SCY1 SLP3 ATPRMT1A AT2G19870 ATCAF1 PSB29 AtFBA1 AT2G21530 IAA8 SCPL13 SCPL8 AT2G24060 PRPL35 AtENODL14 ER AT2G26500 CYCB1;4 BASS2 PGY1 AT2G27680 HDA13 CH-CPN60A CSD2 TUB7 ATPCNA2 PY AT2G30320 ATFC-II PSBW FTSH2 AT2G32060 PRORP1 BAM6 ARASP ATPDI9 ATCOP1 AT2G33370 DAL PRPL28 EMB3113 AT2G34480 HMR NF-YA4 EDA3 GTE01 GDCH AT2G35410 scpl26 AT2G36350 DML1 RPL24A ATRPS5B AT2G37660 AtAUX1 PSRP4 PDE328 PnsL1 AT2G39850 AteIF3f LHCB4.3 ATKT2 AT2G40660 ARR16 ATCBK3 AT2G41820 ATOEP16-3 AT2G42650 AT2G43030 AT2G43560 AT2G44120 CHL-CPN10 AT2G45700 CPFTSY ATPMM ATMPK12 SPA1 PSAP CER8 PHR2 DEG2 PnsL3 AT3G02640 EMB2768 ATF1 PDE326 PDE324 emb2458 emb2171 TPR10 HEL AT3G04840 RPL18 AT3G06700 AT3G07110 AAC1 AT3G08740 AT3G09200 PTAC13 AT3G09250 AT3G09440 AT3G09630 OMR1 LGO CYP77A6 GYRA LSF2 AT3G11120 AT3G11510 AML1 PGK1 AT3G13120 Cpn60beta2 ESM1 PRPS20 SPA3 ATHM4 AT3G15520 AT3G15570 MFP1 AT3G16080 PSAH-1 NDF4 EMB2083 AT3G16370 ATEBP AT3G16780 RFC3 POK1 RLK902 AT3G18060 EMB1270 RACK1C MOS4 EMB1865 AtTic62 ATPREP1 CBB1 ATTCP-1 ATTOP6B PSBTN AT3G22150 AT3G22210 AT3G22230 ATWNK2 NET1A ARLIM15 PKP-ALPHA ATCFM3A AT3G23700 ATTOPII HSP60 ATMSH1 HCF101 ATMSH7 PLSP1 ERD2B ATFKBP62 ATL5 LAG1 AtCHUP1 RPL15 ATPRX GAMMA-TIP2 GAPA CCB1 ATTSO2 GHS1 AT3G27180 RPL12 RPL12-C ATMES11 RPL9 AtXTH31 AT3G45030 PTAC16 AT3G47070 AT3G47370 ATNOA1 AT3G47650 EDD AT3G48200 ATBT2 AT3G48420 PDE312 GSA2 ATBBC1 RDR6 OEC33 AT3G51280 AT3G51290 ATSSL4 ATEBP1 ATG4 FTSZ2-2 AT3G52960 AT3G53430 CP29 AT3G53740 AT3G53870 HCEF1 FLN1 AT3G54210 AT3G54400 HTA11 AMP1 LHCA1 PPL1 SBPASE AT3G56370 PSRP5 ACSF ATBZIP61 AT3G58140 AT3G59780 CUM2 AT3G60245 AT3G60750 AT3G61870 CYP20-3 UBQ5 ATDUF7 CP12 AT3G62870 CSP41A OEP6 AtcpRRF EMB3126 AT4G00165 AT4G00810 TROL AT4G01310 AtGH9B13 AT4G02530 PSAD-1 EMB3129 AT4G02840 BSM PETC ATPC1 PSBQ ATK5 APX4 ATPD AT4G10300 LHCB5 AT4G11100 AT4G11175 RHA1B PSAL AT4G12830 AT4G13170 NYC1 AT4G14330 AT4G14480 ATTCX2 FdC1 TUA6 AT4G15000 AT4G15545 AtCLA1 AT4G16450 AT4G17390 AT4G17560 LIL3:1 AT4G17740 AT4G18100 ATSS4 CH-42 RPL16B MORF1 ATRAB8D AT4G20430 ATRP1 PSBQ ATML1 PGR5-LIKE AT4G23740 3xHMG-box2 CRR31 AtHsp90-7 cpHsc70-1 PGI AT4G24750 ATRBP31 AT4G24820 ACP4 CHLM MSRA4 ACYB-2 AT4G26370 AtFBA5 MAP65-2 AR192 AT4G27090 PORB NARA5 AT4G28080 AT4G28360 PSAE-1 AT4G28780 emb2726 AT4G29360 AT4G29520 AT4G30020 AT4G30330 scpl29 AT4G30825 FAD6 RPS6 PGR3 AT4G31985 PDE334 AT4G32340 AtGLDP1 AT4G33500 SEP1 ATCAP1 BLH6 SSR16 AT4G34730 MRL1 CAT2 HCF244 XCP1 LTO1 AT4G35880 AT4G36390 AT4G36530 BEE2 MAP1D XTH7 pde191 ATROPGEF1 AtFBA2 AT4G39040 ATPDX1 LHCB4.1 AT5G01590 STN8 AT5G02160 AT5G02450 AT-HSC70-1 AT5G02870 AT5G02960 ATP58IPK AT5G03850 54CP GYRB2 BTR1 AT5G05200 ATEIF2-A2 ATEGY2 CYC1BAT AT5G07020 AT5G07030 EMS1 ATRPA70B AT5G08050 scpl35 HEMC FTRA2 AT5G09510 PMDH2 AGP4 PAS2 EMP1 OCP3 PPD5 AT5G11480 SSP5 TUB6 DiT1 ATGSL12 EMB3136 SVR3 EMB3137 ATMIXTA AT5G16130 DHAR3 ENH1 EMB1241 ATCBR PSRP6 ATOBGC PCB2 EMB3013 STT3A AtRbcX2 ATIPT9 AT5G20290 ATGER3 CRR42 AT5G22440 EMB1030 HCF136 AT5G23650 TUB8 DCR ATSS1 APRR5 AT5G24490 AT5G25100 EBF2 AT5G25590 BIP1 ARRPS1 AT5G35170 AMOS1 CAC2 G6PD1 ATPRFB AT5G37010 AT5G38510 AT5G38520 APE1 CRR7 OLI7 ATPHB3 RPL27 RPS10B BIP FTSH5 RD21B AGO10 AT5G44520 CLPP4 APE2 AT5G46420 BSK2 AT5G47190 PME5 NF-YB2 AT5G48360 FKBP15-2 LPA66 EMB2812 OVA2 DDM2 cpHsc70-2 CAA33 AT5G51110 DYAD AT5G51560 ATMAP65-3 At-NEET ATSBT1.3 ATPGMP AT5G52650 AT5G52780 AT5G52960 AT5G52970 AT5G53150 FTSH11 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G54750 THI1 AT5G55220 AT5G55520 CRR21 AtHsp90-3 AtHsp90.2 CSN6A AT5G56670 AT5G56710 AT5G56850 GATA21 AT5G56890 NdhN AT5G58330 ftsh9 AT5G59850 AT5G60390 AT5G61170 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ATCNX1 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. AT5G62710 GSA1 SHA1 CHR24 PSAN ATERS JK218 EMB3144 AT5G65220 KAC2 ATLFNR1 AT5G66470 GAMMA MSP-1 ATDDM1 RLK PSBA MATK RPS16 RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 RPS14 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBE ORF31 PETG PSAJ RPL33 RPS18 RPL20 CLPP1 PSBB PSBT PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 RPL32 YCF5 NDHD PSAC NDHE NDHG NDHI NDHA RPS15 ribosomal protein S3
GO:0006790
sulfur compound metabolic process		BP1.181e-62FZL ATCPO-I POR TOR2 ATCTL1 OE23 EMB2784 PSAO AVDE1 AT1G09310 AT1G11860 AT1G12000 AT1G12230 AT1G12800 CP24 AtHBP1 LHCA2*1 APS2 ATLFNR2 DRT112 AOAT1 AOR PSAK PSAF ATROPGEF14 ACBP PRK AT1G32470 EMB3003 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 AtBGAL5 PSAH-2 AtTLP18.3 AGP21 AT1G55360 PSAG AT1G56190 AT1G60000 ACLA-2 LHCA3 ACO2 AT1G64650 AT1G65230 PSBY ATHPR1 AT1G68260 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AtGH9B7 PSBR FLA7 ENR1 ABH1 AGP9 PDTPI AtFBA1 SCPL8 BASS2 AT2G27680 PY ATFC-II GDCH MAT3 PnsL1 ATKT2 AT2G42220 BIO2 MTHFR2 ATF1 EMB3119 Encodes a defensin-like (DEFL) family protein. ADK1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 ESM1 MFP1 NDF4 CBB1 ATSAHH2 PLSP1 ERD2B LTA2 ATPRX GAMMA-TIP2 ATMDAR4 PTAC16 GSA2 OEC33 ATG4 FTSZ2-2 AtPIP2;1 AT3G54400 ATGR2 SBPASE ACSF MTHFR1 AT3G60750 CYP20-3 APG1 TROL AT4G01310 GLB1 PSAD-1 ATPC1 ATK5 APX4 ATPD LHCB5 AT4G13840 AtCLA1 CH-42 ATRP1 3xHMG-box2 CER2 AT4G24930 ACYB-2 PORB PSAE-1 AT4G30020 FAD6 AtENODL15 PDE334 AtGLDP1 KUP5 AT4G34950 LTO1 XTH7 ATPRP4 AtFBA2 AT4G39970 2-Cys HEMC FTRA2 AtPPa6 PMDH2 PAS2 TUB6 ATIMD1 GASA4 ATCIMS PCB2 ATCPN21 BGLU37 AtTGG1 CAC2 ATGSL1 AT5G38520 FTSH5 CHL APE2 TET1 CPI1 ATPGMP FTSH11 THI1 AT5G58330 GSA1 PSAN ATLFNR1 MSP-1 NDHD NDHE
GO:0044802
single-organism membrane organization		BP1.516e-62FZL POR ATHM1 OE23 ABC1 CRB ARR4 MORF9 CLPP6 AT1G12800 FUG1 ATCLH1 ATLFNR2 AT1G21350 PRK AtLrgB PRPL11 RPL21C Aty2 CP22 Lhca5 AT1G49380 AT1G51110 ATSCO1 AT1G62780 AT1G64510 AT1G65230 PTAC4 AT1G67870 BBX14 AT1G70200 PDE343 emb2184 AT1G75460 TAPX SCY1 PSB29 ATSULA AtFBA1 AT2G27680 FTSH2 DAL EDA3 AT2G35410 RCA ATFER4 AT2G42130 AT2G43560 AT2G44870 CPFTSY PSAP ATBCA1 EMB2768 EMB3119 PTAC13 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G13120 ATMT3 ATHM4 MFP1 EMB1270 EMB1865 AT3G23700 HCF101 PLSP1 AtCHUP1 CCB1 PTAC16 AT3G47070 ATNOA1 AT3G48420 OEC33 ATG4 CP33 HCEF1 FLN1 SBPASE ACSF AT3G61870 AtcpRRF EMB3126 TROL AGY1 AT4G02530 EMB3129 PETC ATPD AT4G11175 LIL3:1 ATML1 PGR5-LIKE NARA5 emb2726 PGR3 PDE334 SSR16 AT4G34730 MRL1 pde191 54CP ATEGY2 2-Cys AT5G07020 AtPPa6 PMDH2 PPD5 EMB3136 BETA DHAR3 ATOBGC emb1211 HCF136 ARRPS1 AMOS1 ATPRFB EMB139 NDH18 CLPP4 AT5G47190 OVA2 AT5G51110 HCF106 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G55220 SHA1 ATLFNR1 MSP-1
GO:0009628
response to abiotic stimulus		BP3.199e-62ATGPAT4 CER1 ATCSLD5 emb2386 POR ATHM1 TOR2 ATPDI10 ATCTL1 OE23 AT1G07440 ABC1 AVDE1 AtCRT1b CRB ARR4 ATFD1 ICE2 CYP71B2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. RPL10 CPN10 AtAVP1 CP24 ACR11 AT1G17200 ATARCA LHCA2*1 ATLFNR2 DRT112 ATCOX6B2 FB ATPIN7 AOAT1 AOR KDR APT1 AT1G29660 UGT78D1 AT1G30580 ATIMD3 CXC750 ACBP PRK OHP2 RPL21C GAPB Aty2 CP22 mtLPD1 AT1G49010 TUA2 ATHX GDC1 AT1G51400 ABA2 AT1G52770 mMDH1 AT1G54410 AIN1 AtTLP18.3 CPN60B AtCRT1a ATFD2 ACO2 BDG1 RPOD1 ABA4 RBCS1A ATHPR1 ADO3 AT-EXP1 PGM2 AT1G70820 AtCPB AT1G73230 NRP1 GASA6 AtGH9B7 TUB1 ATCDSP32 TAPX ATGSTU20 PSBR AHK4 ARPN ATNRP1 SKU6 AtHsp90.5 ZIP7 XERICO ENR1 AGT ABH1 ATCOR413-PM1 AT2G16365 AT2G20270 PDTPI AtFBA1 SEP2 AT2G23840 ATHO1 CSD2 HIS4 ATEXP6 TUB7 AtFAD3 ATGSTF7 FTSH2 ATGLR3.7 ATPDI9 ATCOP1 EMB3113 NF-YA4 GDCH GAMMA-TIP MAT3 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ATEXP3 AT2G37660 AtAUX1 RCA ELF4 LHCB4.3 AT2G40660 AT2G41090 ATCBK3 GPDHC1 AT2G43090 AT2G44920 AT2G45700 ATPMM ATHH2 SPA1 ATPDI11 ATBCA1 ATLTL1 TPR10 HEL EMB3119 LTP6 AT3G09200 AT3G09440 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DRT100 PGK1 ESM1 ATMT3 AT3G15570 ADS3 AQP1 AT3G16370 ATEBP AT3G18060 ATCAD4 CBB1 ATTCP-1 ATWNK2 ARLIM15 AT3G23700 ATSAHH2 HSP60 ATMSH1 ATMSH7 ATFKBP62 GAMMA-TIP2 GAPA AT3G46630 PTAC16 AT3G47070 ATNOA1 ATBT2 ATPCA DIN11 OEC33 ATEBP1 AtPIP2;1 CP29 AT3G53870 HCEF1 HTA11 AMP1 LHCA1 ATTSC13 SBPASE ACSF AT3G58610 CUM2 AT3G60750 CYP20-3 CP12 CSP41A TROL AGY1 GLB1 AT4G02530 PETC APX4 ATPD ATSPS4F LHCB5 AtENODL19 TUA6 AT4G15545 AtCLA1 AT4G16260 AT4G16980 DELTA-TIP2 LIL3:1 ATSS4 ERD3 PSBQ PGR5-LIKE CRR31 AtHsp90-7 cpHsc70-1 ATRBP31 AT4G24820 ACP4 ATFSD1 MSRA4 ACYB-2 AR192 AT4G29520 FAD6 PDE334 AT4G32530 AT4G33500 SEP1 ALDH3 ATCAP1 CAT2 PIP2;7 HCF244 ALDH3F1 SHM1 ATROPGEF1 ATPDX1 LHCB4.1 OHP AT-HSC70-1 ATP58IPK FD-GOGAT KCS19 ATEIF2-A2 AtFAD8 CYC1BAT 2-Cys ATRPA70B AT5G08050 HEMC AtPPa6 PMDH2 AT5G10010 PAS2 OCP3 TUB6 DiT1 ATIMD1 BETA ATMIXTA ENH1 ATCIMS CSD3 ATOBGC STT3A TUA3 ATGER3 ATCPN21 HCF136 TUB8 ATSS1 APRR5 DGR2 BIP1 AMOS1 CAC2 ATGSL1 G6PD1 RBCS3B RBCS2B RBCS1B OLI7 ATPHB3 BIP FTSH5 AT5G42740 RD21B AtCEST APE2 KAS1 ATFRO6 cpHsc70-2 CPI1 ATPGMP FTSH11 THI1 ATFTSZ1-1 AtHsp90-3 AtHsp90.2 CSN6A GATA21 EMB2728 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ATCNX1 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. ALDH12A1 TUB3 ATNDPK2 GSA1 AtBGAL10 JK218 CLEL ATLFNR1 GAMMA MSP-1 ABA1 ATPA ATPB
GO:1901566
organonitrogen compound biosynthetic pro...		BP4.174e-62FZL ATCPO-I POR ATCTL1 OE23 EMB2784 PSAO ALB-1V AVDE1 AT1G09310 CRB ATATP-PRT2 MORF9 CLPP6 AT1G11860 AT1G12230 AT1G12800 CP24 ATARCA DRT112 AOAT1 AOR APT1 AT1G28530 PSAK ATIMD3 PSAF ATROPGEF14 ACBP PRK AT1G32470 PRPL11 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 RACK1B AT1G51110 PSAH-2 ABA2 AtTLP18.3 AGP21 AT1G55360 PSAG AT1G56050 AT1G56190 AT1G60000 LHCA3 ACO2 ATKCR1 PSBY ATHPR1 AT1G68260 FLN2 HEMB1 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. emb2184 ATGSTU20 PSBR APT2 ATIMD2 WIN1 ABH1 AT2G17033 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PDTPI AtFBA1 SCPL8 AT2G24060 ATHO1 AT2G27680 PY ATFC-II ATGSTF7 EDA3 GDCH AT2G35410 MAT3 AT2G37660 PnsL1 AT2G40400 HEME2 ATKT2 AT2G40660 AT2G42220 AT2G43030 AT2G43090 BIO2 COS1 CHL-CPN10 AT2G44920 PDE326 EMB3119 AT3G04840 RPL18 ATYLMG1-1 AT3G08740 AT3G09630 ADK1 OMR1 GYRA Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ATPME3 PRPS20 ATHM4 ADS3 AT3G16780 RACK1C CBB1 ATTCP-1 AT3G23700 ATSAHH2 AT3G23940 HCF101 ATL5 LAG1 LTA2 ATPRX GAMMA-TIP2 PTAC16 AHAS GSA2 ATSSL4 ATEBP1 ATG4 FTSZ2-2 AtPIP2;1 AT3G53580 HCEF1 AT3G54400 ATTSC13 ATDFD SBPASE ACSF AT3G58610 AT3G60750 AT3G61870 CYP20-3 CSP41A AtcpRRF EMB3126 AT4G00895 TROL AT4G01310 GLB1 AT4G02530 PSAD-1 ATPC1 APX4 ATPD LHCB5 FdC1 AtCLA1 AT4G17390 LIL3:1 CH-42 AK-HSDH CER2 ATRBP31 AT4G24830 CHLM ACYB-2 AT4G26370 AR192 PORB PSAE-1 FAD6 PDE334 AtGLDP1 KUP5 SEP1 AT4G36390 ATPRP4 AtFBA2 AT4G39040 ATPDX1 AT5G02870 ADK2 ATEIF2-A2 AT5G08050 HEMC AtPPa6 PMDH2 PAS2 AT5G10920 TUB6 AK ABAR ATIMD1 GASA4 ATCIMS PCB2 ATIPT9 ATCPN21 AT5G22340 HCF136 ARRPS1 ATGSL1 AT5G36160 OLI7 CHL APE2 AT5G46580 TET1 AT5G47210 AT5G51110 AT5G52960 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. THI1 ATFTSZ1-1 GATA21 ATPDX2 ATNDPK2 GSA1 PSAN MSP-1 ATPA ATPF ATPH ATPI ATPE ATPB NDHE
GO:0043623
cellular protein complex assembly		BP3.989e-61FZL PSB27 POR ATHM1 AtTPX2 TOR2 atTIC20 emb2394 OE23 PSAO CRB CLPP6 GAPA-2 AT1G14270 AT1G14345 NDF1 HCF173 AT1G19740 TUB5 ATLFNR2 PRK AT1G32470 RPL21C GAPB CP22 Lhca5 AT1G49380 TUA2 UBC20 AT1G52220 PSAH-2 AIN1 AtTLP18.3 ATFD2 ATSCO1 AT1G63610 PSBY ATHPR1 AtCPB AT1G72480 AT1G74800 PDE343 emb2184 AT1G75460 LQY1 TUB1 PSBR OTP51 PSB29 AtFBA1 AT2G21530 IAA8 AT2G26500 ATEXP6 TUB7 KIS PSBW FTSH2 ARASP DAL AIR9 GDCH AtAUX1 PnsL1 ATOEP16-3 AT2G43030 BIO2 AT2G43560 CPFTSY PSAP AAC1 PSAH-1 EMB1270 ATTOP6B PSBTN HSP60 PLSP1 AtCHUP1 LTA2 GAPA CCB1 AT3G43610 AT3G45850 H2B AT3G47650 OEC33 FTSZ2-2 HCEF1 PPL1 SBPASE ACSF AT3G61870 CSP41A TROL PSAD-1 PETC ATPC1 ATK5 ATPD PSAL TUA6 AT4G16450 LIL3:1 PSBQ PGR5-LIKE AT4G24820 ACP4 MAP65-2 TET7 PSB28 PSAE-1 AT4G30020 PDE334 SEP1 HCF244 LTO1 NDH-M AtFBA2 OHP 54CP PMDH2 TUB6 EMB3136 ENH1 TUA3 CRR42 HCF136 TUB8 AMOS1 ATPRFB AT5G38520 APE1 CRR7 ABIL4 AtCEST CLPP4 LPA66 CPI1 AT5G51110 ATMAP65-3 AT5G52780 AT5G52960 ATFTSZ1-1 CSN6A NdhN AT5G58330 TUB3 ATLFNR1 GAMMA MSP-1 PSBA PSBK PSBI ATPH PSBD PSBC YCF3 NDHJ NDHC YCF4 PETA PSBL PETG RPS18 PSBB PSBH PETD YCF5 NDHI NDHA
GO:0008610
lipid biosynthetic process		BP4.522e-61AT1G01080 ATGPAT4 AT1G02150 POR AT1G04420 emb2394 ADS1 EMB2784 ALB-1V ABC1 AVDE1 AT1G09130 CRB Z-ISO ATFD1 CLPP6 AT1G11860 AT1G12230 AT1G12800 AT1G14270 AT1G14345 NDF1 FUG1 AT1G18660 LHCA2*1 AOR AT1G30690 FdC2 PRPL11 EMB3003 GAPB AtBGAL5 AT1G49380 GDC1 ABA2 ACP2 AtTLP18.3 CPN60B AT1G57770 AT1G62780 AT1G64650 BDG1 AT1G65230 ABA4 ATKCR1 PSRP3/1 AT1G74070 emb2184 AtGH9B7 ATKS FLA7 ENR1 AGP9 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 SCPL8 AT2G24060 ATHO1 AT2G27680 PY AtFAD3 ATFC-II ATCB5-B PRPL28 EDA3 AT2G35410 AT2G37660 CAC3 AT2G42130 AT2G43030 BIO2 AT2G43560 AT2G44920 CPFTSY CER8 PHR2 DEG2 EMB2768 ATF1 PDE326 EMB3119 PTAC13 AT3G09860 AtLCY Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST PGK1 AT3G12930 AT3G13120 ESM1 AT3G15520 ADS3 MFP1 NDF4 EMB1865 CBB1 PKP-ALPHA AT3G23530 AT3G23700 HCF101 ERD2B LAG1 AT3G25660 AT3G25805 LTA2 ATPRX ORF02 CCB1 RPL9 PTAC16 ATNOA1 AT3G47650 AT3G48420 ATG4 PSRP2 CP33 HCEF1 AT3G54210 ATTSC13 SBPASE UGP3 ACSF AT3G58140 AT3G59780 AT3G60750 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 TROL AT4G01310 GLB1 AT4G02530 EMB3129 ATPC1 APX4 ATPD ATSPS4F AT4G10300 FdC1 CYP97B3 AtCLA1 AT4G17560 LIL3:1 AT4G17740 ATSS4 CH-42 CER2 PGI AT4G24750 ACP4 CHLM B1 NARA5 AT4G28080 PSB28 emb2726 FAD6 PGR3 AtGLDP1 SEP1 MRL1 HCF244 LTO1 AT4G36390 MAP1D AtFBA2 AT4G39040 54CP FD-GOGAT KCS19 AtFAD8 ATEGY2 AT5G07020 HEMC FTRA2 PMDH2 AGP4 PAS2 PPD5 TUB6 DiT1 EMB3137 AT5G14910 BCCP2 AT5G16240 PCB2 ATCPN21 HCF136 SQE5 ATSS1 ARRPS1 CAC2 G6PD1 NDH18 CLPP4 CHL KAS1 OVA2 CPI1 ATPGMP AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 LUT2 NdhN AtcPT4 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ATNDPK2 AT5G66470 ABA1 ACCD NDHE
GO:0061024
membrane organization		BP6.423e-61FZL POR ATHM1 OE23 ABC1 CRB ARR4 MORF9 CLPP6 AT1G12800 FUG1 ATCLH1 ATLFNR2 AT1G21350 PRK AtLrgB PRPL11 RPL21C Aty2 CP22 Lhca5 AT1G49380 AT1G51110 ATSCO1 AT1G62780 AT1G64510 AT1G65230 PTAC4 AT1G67870 BBX14 AT1G70200 PDE343 emb2184 AT1G75460 TAPX SCY1 PSB29 ATSULA AtFBA1 AT2G27680 FTSH2 DAL EDA3 AT2G35410 RCA ATFER4 AT2G42130 AT2G43560 AT2G44870 CPFTSY PSAP ATBCA1 EMB2768 EMB3119 PTAC13 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G13120 ATMT3 ATHM4 MFP1 EMB1270 EMB1865 AT3G23700 HCF101 PLSP1 AtCHUP1 CCB1 PTAC16 AT3G47070 ATNOA1 AT3G48420 OEC33 ATG4 CP33 HCEF1 FLN1 SBPASE ACSF AT3G61870 AtcpRRF EMB3126 TROL AGY1 AT4G02530 EMB3129 PETC ATPD AT4G11175 LIL3:1 ATML1 PGR5-LIKE NARA5 emb2726 PGR3 PDE334 SSR16 AT4G34730 MRL1 pde191 54CP ATEGY2 2-Cys AT5G07020 AtPPa6 PMDH2 PPD5 EMB3136 BETA DHAR3 ATOBGC emb1211 HCF136 ARRPS1 AMOS1 ATPRFB EMB139 NDH18 CLPP4 AT5G47190 OVA2 AT5G51110 HCF106 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G55220 SHA1 ATLFNR1 MSP-1
GO:0009668
plastid membrane organization		BP1.253e-60FZL POR ATHM1 ABC1 CRB MORF9 CLPP6 AT1G12800 FUG1 AT1G21350 AtLrgB PRPL11 RPL21C Aty2 CP22 Lhca5 AT1G49380 AT1G51110 ATSCO1 AT1G62780 AT1G64510 AT1G65230 PTAC4 AT1G70200 PDE343 emb2184 TAPX SCY1 PSB29 ATSULA AtFBA1 AT2G27680 FTSH2 DAL EDA3 AT2G35410 ATFER4 AT2G42130 AT2G43560 AT2G44870 CPFTSY PSAP EMB2768 PTAC13 PGK1 AT3G13120 ATHM4 MFP1 EMB1270 EMB1865 AT3G23700 HCF101 PLSP1 AtCHUP1 CCB1 PTAC16 AT3G47070 ATNOA1 AT3G48420 OEC33 ATG4 CP33 HCEF1 FLN1 ACSF AT3G61870 AtcpRRF EMB3126 TROL AGY1 AT4G02530 EMB3129 ATPD AT4G11175 LIL3:1 ATML1 PGR5-LIKE NARA5 emb2726 PGR3 SSR16 AT4G34730 MRL1 pde191 ATEGY2 2-Cys AT5G07020 PPD5 EMB3136 DHAR3 ATOBGC emb1211 HCF136 ARRPS1 AMOS1 ATPRFB EMB139 NDH18 CLPP4 AT5G47190 OVA2 AT5G51110 HCF106 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G55220 MSP-1
GO:0010027
thylakoid membrane organization		BP1.253e-60FZL POR ATHM1 ABC1 CRB MORF9 CLPP6 AT1G12800 FUG1 AT1G21350 AtLrgB PRPL11 RPL21C Aty2 CP22 Lhca5 AT1G49380 AT1G51110 ATSCO1 AT1G62780 AT1G64510 AT1G65230 PTAC4 AT1G70200 PDE343 emb2184 TAPX SCY1 PSB29 ATSULA AtFBA1 AT2G27680 FTSH2 DAL EDA3 AT2G35410 ATFER4 AT2G42130 AT2G43560 AT2G44870 CPFTSY PSAP EMB2768 PTAC13 PGK1 AT3G13120 ATHM4 MFP1 EMB1270 EMB1865 AT3G23700 HCF101 PLSP1 AtCHUP1 CCB1 PTAC16 AT3G47070 ATNOA1 AT3G48420 OEC33 ATG4 CP33 HCEF1 FLN1 ACSF AT3G61870 AtcpRRF EMB3126 TROL AGY1 AT4G02530 EMB3129 ATPD AT4G11175 LIL3:1 ATML1 PGR5-LIKE NARA5 emb2726 PGR3 SSR16 AT4G34730 MRL1 pde191 ATEGY2 2-Cys AT5G07020 PPD5 EMB3136 DHAR3 ATOBGC emb1211 HCF136 ARRPS1 AMOS1 ATPRFB EMB139 NDH18 CLPP4 AT5G47190 OVA2 AT5G51110 HCF106 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G55220 MSP-1
GO:1901360
organic cyclic compound metabolic proces...		BP2.622e-60AT1G01320 AT1G02150 IMPA-6 ATCSLD5 emb2386 FZL ATCPO-I PSB27 POR ATHM1 AtTPX2 emb2394 ATCTL1 ORA59 RHON1 OE23 AT1G07440 PSAO ALB-1V ABC1 AVDE1 CRB ATATP-PRT2 ARR4 ATFD1 MORF9 CLPP6 AT1G12000 AT1G12230 AT1G12800 ICE2 GAPA-2 AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 RPL10 AT1G14345 ATWHY1 CENP-C NDF1 FUG1 ATARCA AT1G18540 LHCA2*1 BES1 ATCLH1 ATLFNR2 DRT112 AT1G22630 FB ATCAF2 AOR MLP423 BBX15 APT1 AT1G28530 AT1G30690 CXC750 PRK AT1G32470 FdC2 PRPL11 ATPS1 EMB3003 ARF20 RPL21C GAPB ARP1 CYCA1;1 CP22 AtBGAL5 Lhca5 GATB RACK1B AT1G49010 AT1G49380 UBC20 GDC1 AT1G51110 AT1G52220 PSAH-2 ABA2 AT1G52510 ATMUM4 AIN1 AT1G54500 G-H2AX AtTLP18.3 AT1G55140 PSAG AT1G56050 AT1G60590 ACO2 ATSCO1 AT1G62780 AT1G64650 RPOD1 AT1G65230 ATKCR1 PSBY ATHPR1 ADO3 BBX14 FLN2 HEMB1 CMT3 AT1G70200 AT1G70820 AT1G72250 ATHDG11 BEE3 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PDE343 emb2184 AT1G75460 AtGH9B7 LQY1 ATGSTU20 AT1G78995 RECA1 APT2 ARR14 WRKY3 FLA7 ENR1 ABH1 AGP9 OTP51 AT2G16365 PFU2 AT2G17033 AT2G17972 HBI1 SCY1 AT2G19870 ATCAF1 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI ATSULA AtFBA1 AT2G21530 AT2G21960 IAA8 SCPL8 AT2G24060 PRPL35 AT2G26500 ATHO1 AT2G27680 HDA13 ATPCNA2 PY AT2G30320 ATFC-II PSBW ATGSTF7 FTSH2 AT2G32060 PRORP1 ATCB5-B ATCOP1 AT2G33370 DAL HMR NF-YA4 EDA3 GTE01 GDCH AT2G35410 AT2G36350 DML1 RPL24A GAMMA-TIP MAT3 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 PDE328 PnsL1 RCA LHCB4.3 AT2G40400 HEME2 ATKT2 AT2G40660 ARR16 CYP98A3 AT2G43030 BIO2 AT2G43560 COS1 AT2G44120 CHL-CPN10 AT2G44920 AT2G45700 CPFTSY SPA1 PSAP PHR2 ATBCA1 EMB2768 ATF1 PDE326 PDE324 EMB3119 AT3G04840 RPL18 AT3G06700 AT3G07110 ATYLMG1-1 AT3G09200 PTAC13 AT3G09250 AT3G09630 ADK1 LGO GYRA AT3G11510 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 ATPME3 PRPS20 ATHM4 AT3G15520 ADS3 MFP1 AT3G16080 PSAH-1 NDF4 ATEBP AT3G16780 POK1 RACK1C MOS4 EMB1865 AtTic62 ATCAD4 CBB1 ATTCP-1 ATTOP6B PSBTN AT3G22150 AT3G22210 ARLIM15 PKP-ALPHA ATCFM3A AT3G23700 ATTOPII AT3G23940 ATMSH1 HCF101 ATMSH7 PLSP1 ERD2B ATL5 LAG1 AtCHUP1 LTA2 RPL15 ATPRX GAPA CCB1 ATTSO2 AT3G27180 PTAC16 AT3G47070 AT3G47370 ATNOA1 AT3G47650 EDD AT3G48200 ATBT2 AT3G48420 PDE312 GSA2 ATBBC1 RDR6 OEC33 AT3G51280 AT3G51290 ATSSL4 ATEBP1 ATG4 FTSZ2-2 AT3G53430 CP29 HCEF1 FLN1 HTA11 LHCA1 PPL1 ATTSC13 ATDFD SBPASE ACSF ATBZIP61 AT3G58140 AT3G58610 AT3G59780 CUM2 AT3G61870 CYP20-3 ATDUF7 AT3G62870 CSP41A OEP6 AtcpRRF APG1 EMB3126 ANTR2 AT4G00895 TROL GLB1 AT4G02530 PSAD-1 EMB3129 AT4G02840 BSM PETC ATPC1 ATK5 APX4 ATPD LHCB5 AT4G11100 AT4G11175 PSAL AT4G12830 NYC1 AT4G14330 ATTCX2 FdC1 AT4G15000 IAGLU AtCLA1 AT4G17390 AT4G17560 LIL3:1 CH-42 AK-HSDH MORF1 PSBQ ATML1 PGR5-LIKE AT4G24350 AT4G24750 ATRBP31 AT4G24820 AT4G24830 ACP4 CHLM AT4G26370 AtFBA5 MAP65-2 AR192 AT4G27090 PORB NARA5 AT4G28080 PSAE-1 AT4G28780 emb2726 AT4G29360 AT4G30825 FAD6 RPS6 PGR3 PDE334 AT4G32340 AtGLDP1 SEP1 BLH6 SSR16 AT4G34730 MRL1 HCF244 LTO1 AT4G36390 BEE2 SHM1 pde191 AtFBA2 AT4G39040 ATCAD9 ATPDX1 LHCB4.1 AT5G02160 AT5G02870 ADK2 54CP GYRB2 FD-GOGAT BTR1 AT5G05200 ATEIF2-A2 2-Cys AT5G07020 ATRPA70B AT5G08050 HEMC FTRA2 AT5G09510 AtPPa6 PMDH2 AGP4 AT5G10920 OCP3 PPD5 AT5G11480 TUB6 DiT1 ATGSL12 EMB3136 ABAR SVR3 EMB3137 BETA AT5G14910 ATMIXTA AT5G16130 ENH1 ATOBGC PCB2 STT3A ATIPT9 AT5G20290 CRR42 AT5G22340 AT5G22440 EMB1030 HCF136 AT5G23650 SQE5 APRR5 AT5G25590 ARRPS1 AT5G35170 CAC2 ATGSL1 G6PD1 AT5G36160 ATPRFB AT5G37010 AT5G38520 CRR7 UDG4 OLI7 ATPHB3 FTSH5 AGO10 AT5G44520 CLPP4 CHL AT5G46420 AT5G46580 AT5G47190 AT5G47210 NF-YB2 AT5G48360 LPA66 EMB2812 OVA2 DDM2 CPI1 AT5G51110 DYAD ATMAP65-3 At-NEET ATPGMP AT5G52780 AT5G52960 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. THI1 AT5G55220 ATFTSZ1-1 CRR21 CSN6A AT5G56670 AT5G56850 GATA21 NdhN AT5G58330 AT5G59850 ATPDX2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ALDH12A1 ATNDPK2 GSA1 SHA1 CHR24 PSAN ATERS EMB3144 AT5G65220 KAC2 ATLFNR1 AT5G66470 GAMMA MSP-1 ATDDM1 PSBA MATK RPS16 RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBE ORF31 PETG PSAJ RPL33 RPS18 RPL20 CLPP1 PSBB PSBT PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 NDHF RPL32 YCF5 NDHD PSAC NDHE NDHG NDHI NDHA RPS15
GO:0009658
chloroplast organization		BP2.342e-59AT1G02150 FZL POR ATTIC110 ABC1 CRB MORF9 CLPP6 AT1G11860 AT1G12800 FUG1 PRK AtLrgB RPL21C GAPB AT1G44000 GDC1 ATSCO1 AT1G62780 AT1G65230 FLN2 ARC12 AT1G70200 PDE343 emb2184 EMB1047 AtHsp90.5 AT2G16365 ATCAF1 PSB29 PDTPI ATSULA AtFBA1 AT2G27680 CH-CPN60A FTSH2 ARASP DAL EDA3 AT2G35410 CPFTSY SPA1 DEG2 EMB2768 ATYLMG1-1 PTAC13 PGK1 AT3G13120 Cpn60beta2 MFP1 EMB1865 ATPREP1 AT3G23700 HCF101 PLSP1 AtCHUP1 MAR1 PTAC16 AT3G47070 ATNOA1 EDD AT3G48200 OEC33 ATSSL4 ATG4 FTSZ2-2 HCEF1 FLN1 ATGR2 ACSF AT3G58140 AtcpRRF EMB3126 TROL AGY1 EMB3129 LIL3:1 PGR5-LIKE cpHsc70-1 AT4G24750 NARA5 emb2726 PGR3 MRL1 FD-GOGAT AT5G07020 AT5G08050 PMDH2 KAC1 AT5G11480 EMB3136 AT5G13770 ATOBGC ATCPN21 emb1211 HCF136 ARRPS1 AMOS1 ATPRFB AtCEST CLPP4 KAS1 CAA33 AT5G51110 PDV1 AT5G55220 ATFTSZ1-1 ATERS EMB3144 KAC2 MSP-1
GO:0044260
cellular macromolecule metabolic process		BP1.013e-58AT1G01100 AT1G01320 AT1G02150 IMPA-6 ATCSLD5 emb2386 PSAD-2 FZL ATCPO-I PSB27 POR ATHM1 AtTPX2 RPS15 PDLP2 AT1G04800 TOR2 ATPDI10 emb2394 ATCTL1 ORA59 RHON1 OE23 EMB2784 AT1G07440 RPS15A AT1G08360 PSAO ABC1 AVDE1 AtCRT1b CRB AT1G09590 AT1G09690 ATATP-PRT2 ARR4 MORF9 CLPP6 AT1G12000 AT1G12460 AT1G12800 ICE2 GAPA-2 MAP1B RPL10 ATWHY1 CPN10 ATDEF1 CENP-C CP24 HCF173 FUG1 ATARCA ATNACK1 AT1G18540 LHCA2*1 BES1 ATCLH1 TUB5 ATLFNR2 DRT112 AT1G21740 LYM1 AT1G22630 FB RPL27A ATCAF2 MLP423 BBX15 AT1G27120 AT1G29070 AT1G30690 PRK AT1G32160 AT1G32470 PRPL11 PGY2 ATPS1 ARF20 RPL21C GAPB ARP1 Aty2 AtcFBP CYCA1;1 CP22 Lhca5 EMB3105 RKL1 GATB RACK1B AT1G49010 AT1G49380 UBC20 AT1G52220 PSAH-2 AT1G52510 mMDH1 ATMUM4 AIN1 AT1G54500 G-H2AX AtTLP18.3 AT1G54820 AT1G55140 CPN60B AT1G56190 ATSAR1 AtCRT1a AT1G60590 ATSCO1 AT1G62780 AT1G64510 RPOD1 AT1G65230 PSBY ATHPR1 ADO3 BBX14 ATXYL1 PSRP3/1 FLN2 HEMB1 CMT3 AMY3 AT1G70200 AT1G70600 PGM2 AT1G70820 AT1G72250 ATHDG11 AT1G73655 BEE3 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G74800 PDE343 RPS9 emb2184 AT1G75460 AtGH9B7 LQY1 TUB1 ATGSTU20 emb1473 AT1G78995 RECA1 EMB1047 CS17 ARR14 AHK4 ARPN WRKY3 AtHsp90.5 AT2G04700 ABH1 OTP51 AT2G16365 PFU2 AT2G17972 HBI1 SCY1 ATPRMT1A AT2G19870 ATCAF1 PSB29 AtFBA1 AT2G21530 IAA8 AT2G24060 PRPL35 AtENODL14 ER AT2G26500 CYCB1;4 BASS2 PGY1 AT2G27680 HDA13 CH-CPN60A TUB7 ATPCNA2 PY AT2G30320 ATFC-II PSBW FTSH2 AT2G32060 PRORP1 BAM6 ATPDI9 ATCOP1 AT2G33370 DAL PRPL28 EMB3113 AT2G34480 HMR NF-YA4 EDA3 GTE01 GDCH AT2G35410 AT2G36350 DML1 RPL24A ATRPS5B AT2G37660 PSRP4 PDE328 PnsL1 AteIF3f LHCB4.3 ATKT2 AT2G40660 ARR16 ATCBK3 AT2G41820 ATOEP16-3 AT2G42650 AT2G43030 AT2G43560 AT2G44120 CHL-CPN10 AT2G45700 CPFTSY ATPMM ATMPK12 SPA1 PSAP PHR2 DEG2 PnsL3 AT3G02640 EMB2768 ATF1 PDE326 PDE324 emb2171 TPR10 HEL AT3G04840 RPL18 AT3G06700 AT3G07110 AAC1 AT3G08740 AT3G09200 PTAC13 AT3G09250 AT3G09440 AT3G09630 OMR1 LGO GYRA LSF2 AT3G11120 AT3G11510 AML1 PGK1 AT3G13120 Cpn60beta2 ESM1 PRPS20 SPA3 ATHM4 AT3G15520 AT3G15570 MFP1 AT3G16080 PSAH-1 NDF4 EMB2083 ATEBP AT3G16780 RFC3 POK1 RLK902 AT3G18060 EMB1270 RACK1C MOS4 EMB1865 AtTic62 CBB1 ATTCP-1 ATTOP6B PSBTN AT3G22150 AT3G22210 AT3G22230 ATWNK2 NET1A ARLIM15 PKP-ALPHA ATCFM3A AT3G23700 ATTOPII HSP60 ATMSH1 HCF101 ATMSH7 PLSP1 ERD2B ATFKBP62 ATL5 LAG1 AtCHUP1 RPL15 ATPRX GAPA CCB1 ATTSO2 GHS1 AT3G27180 RPL12 RPL12-C ATMES11 RPL9 AtXTH31 AT3G45030 PTAC16 AT3G47070 AT3G47370 ATNOA1 AT3G47650 EDD AT3G48200 ATBT2 AT3G48420 PDE312 GSA2 ATBBC1 RDR6 OEC33 AT3G51280 AT3G51290 ATSSL4 ATEBP1 ATG4 FTSZ2-2 AT3G52960 AT3G53430 CP29 AT3G53740 AT3G53870 HCEF1 FLN1 AT3G54210 HTA11 LHCA1 PPL1 SBPASE AT3G56370 PSRP5 ACSF ATBZIP61 AT3G58140 AT3G59780 CUM2 AT3G60245 AT3G60750 AT3G61870 CYP20-3 UBQ5 ATDUF7 CP12 AT3G62870 CSP41A OEP6 AtcpRRF EMB3126 AT4G00165 AT4G00810 TROL AT4G01310 AtGH9B13 AT4G02530 PSAD-1 EMB3129 AT4G02840 BSM PETC ATPC1 PSBQ ATK5 APX4 ATPD AT4G10300 LHCB5 AT4G11100 AT4G11175 RHA1B PSAL AT4G12830 AT4G13170 NYC1 AT4G14330 AT4G14480 ATTCX2 FdC1 TUA6 AT4G15000 AT4G15545 AtCLA1 AT4G16450 AT4G17390 AT4G17560 LIL3:1 AT4G18100 ATSS4 CH-42 RPL16B MORF1 ATRAB8D ATRP1 PSBQ ATML1 PGR5-LIKE AT4G23740 3xHMG-box2 CRR31 AtHsp90-7 cpHsc70-1 PGI AT4G24750 ATRBP31 AT4G24820 ACP4 CHLM MSRA4 AT4G26370 AtFBA5 MAP65-2 AR192 AT4G27090 PORB NARA5 AT4G28080 AT4G28360 PSAE-1 AT4G28780 emb2726 AT4G29360 AT4G29520 AT4G30020 AT4G30330 AT4G30825 FAD6 RPS6 PGR3 AT4G31985 PDE334 AT4G32340 AtGLDP1 AT4G33500 SEP1 BLH6 SSR16 AT4G34730 MRL1 CAT2 HCF244 XCP1 LTO1 AT4G36390 AT4G36530 BEE2 MAP1D XTH7 pde191 AtFBA2 AT4G39040 ATPDX1 LHCB4.1 AT5G01590 STN8 AT5G02160 AT5G02450 AT-HSC70-1 AT5G02870 AT5G02960 ATP58IPK AT5G03850 54CP GYRB2 BTR1 AT5G05200 ATEIF2-A2 CYC1BAT AT5G07020 EMS1 ATRPA70B AT5G08050 HEMC FTRA2 AT5G09510 PMDH2 AGP4 PAS2 EMP1 OCP3 PPD5 AT5G11480 SSP5 TUB6 DiT1 ATGSL12 EMB3136 SVR3 EMB3137 ATMIXTA AT5G16130 DHAR3 ENH1 EMB1241 ATCBR PSRP6 ATOBGC PCB2 EMB3013 STT3A AtRbcX2 ATIPT9 AT5G20290 ATGER3 CRR42 AT5G22440 EMB1030 HCF136 AT5G23650 TUB8 ATSS1 APRR5 AT5G24490 AT5G25100 EBF2 AT5G25590 BIP1 ARRPS1 AT5G35170 AMOS1 G6PD1 ATPRFB AT5G37010 AT5G38520 APE1 CRR7 OLI7 ATPHB3 RPL27 RPS10B BIP FTSH5 RD21B AGO10 AT5G44520 CLPP4 APE2 AT5G46420 BSK2 AT5G47190 PME5 NF-YB2 AT5G48360 FKBP15-2 LPA66 EMB2812 OVA2 DDM2 cpHsc70-2 CAA33 AT5G51110 DYAD AT5G51560 ATMAP65-3 At-NEET ATPGMP AT5G52650 AT5G52780 AT5G52960 AT5G52970 AT5G53150 FTSH11 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G54750 THI1 AT5G55220 AT5G55520 CRR21 AtHsp90-3 AtHsp90.2 CSN6A AT5G56670 AT5G56710 AT5G56850 GATA21 AT5G56890 NdhN AT5G58330 ftsh9 AT5G59850 AT5G60390 AT5G61170 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ATCNX1 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. AT5G62710 GSA1 SHA1 CHR24 PSAN ATERS JK218 EMB3144 AT5G65220 KAC2 ATLFNR1 AT5G66470 GAMMA MSP-1 ATDDM1 RLK PSBA MATK RPS16 RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 RPS14 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBE ORF31 PETG PSAJ RPL33 RPS18 RPL20 CLPP1 PSBB PSBT PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 RPL32 YCF5 NDHD PSAC NDHE NDHG NDHI NDHA RPS15 ribosomal protein S3
GO:0044272
sulfur compound biosynthetic process		BP4.908e-58FZL ATCPO-I POR ATCTL1 OE23 EMB2784 PSAO AVDE1 AT1G09310 AT1G11860 AT1G12000 AT1G12230 AT1G12800 CP24 AtHBP1 LHCA2*1 ATLFNR2 DRT112 AOAT1 AOR PSAK PSAF ATROPGEF14 ACBP PRK AT1G32470 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 PSAH-2 AtTLP18.3 AGP21 AT1G55360 PSAG AT1G56190 AT1G60000 ACLA-2 LHCA3 ACO2 AT1G65230 PSBY ATHPR1 AT1G68260 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PSBR ABH1 PDTPI AtFBA1 SCPL8 BASS2 AT2G27680 PY GDCH MAT3 PnsL1 ATKT2 AT2G42220 BIO2 EMB3119 Encodes a defensin-like (DEFL) family protein. ADK1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 ESM1 NDF4 CBB1 ATSAHH2 PLSP1 LTA2 ATPRX GAMMA-TIP2 ATMDAR4 PTAC16 GSA2 OEC33 ATG4 FTSZ2-2 AtPIP2;1 AT3G54400 SBPASE ACSF AT3G60750 CYP20-3 APG1 TROL AT4G01310 GLB1 PSAD-1 ATPC1 LHCB5 AT4G13840 AtCLA1 CH-42 ATRP1 CER2 AT4G24930 ACYB-2 PORB PSAE-1 AT4G30020 FAD6 PDE334 AtGLDP1 KUP5 AT4G34950 LTO1 XTH7 ATPRP4 AtFBA2 AT4G39970 2-Cys HEMC FTRA2 AtPPa6 PMDH2 PAS2 TUB6 ATIMD1 GASA4 ATCIMS PCB2 ATCPN21 ATGSL1 AT5G38520 FTSH5 CHL APE2 TET1 ATPGMP FTSH11 THI1 AT5G58330 GSA1 PSAN ATLFNR1 MSP-1 NDHD NDHE
GO:0006725
cellular aromatic compound metabolic pro...		BP1.556e-56AT1G01320 AT1G02150 IMPA-6 ATCSLD5 emb2386 FZL ATCPO-I PSB27 POR ATHM1 AtTPX2 emb2394 ATCTL1 ORA59 RHON1 OE23 AT1G07440 PSAO ALB-1V ABC1 AVDE1 CRB ATATP-PRT2 ARR4 ATFD1 MORF9 CLPP6 AT1G12000 AT1G12230 AT1G12800 ICE2 GAPA-2 AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 RPL10 AT1G14345 ATWHY1 CENP-C NDF1 FUG1 ATARCA AT1G18540 LHCA2*1 BES1 ATCLH1 ATLFNR2 DRT112 AT1G22630 FB ATCAF2 AOR MLP423 BBX15 APT1 AT1G28530 CXC750 PRK AT1G32470 FdC2 PRPL11 ATPS1 ARF20 RPL21C GAPB ARP1 CYCA1;1 CP22 Lhca5 GATB RACK1B AT1G49010 AT1G49380 UBC20 GDC1 AT1G51110 AT1G52220 PSAH-2 AT1G52510 ATMUM4 AIN1 AT1G54500 G-H2AX AtTLP18.3 AT1G55140 PSAG AT1G56050 AT1G60590 ACO2 ATSCO1 AT1G62780 RPOD1 AT1G65230 PSBY ATHPR1 ADO3 BBX14 FLN2 HEMB1 CMT3 AT1G70200 AT1G70820 AT1G72250 ATHDG11 BEE3 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PDE343 emb2184 AT1G75460 LQY1 ATGSTU20 AT1G78995 RECA1 APT2 ARR14 WRKY3 ABH1 OTP51 AT2G16365 PFU2 AT2G17033 AT2G17972 HBI1 SCY1 AT2G19870 ATCAF1 PSB29 PDTPI ATSULA AtFBA1 AT2G21530 AT2G21960 IAA8 SCPL8 AT2G24060 PRPL35 AT2G26500 ATHO1 AT2G27680 HDA13 ATPCNA2 PY AT2G30320 ATFC-II PSBW ATGSTF7 FTSH2 AT2G32060 PRORP1 ATCOP1 AT2G33370 DAL HMR NF-YA4 EDA3 GTE01 GDCH AT2G35410 AT2G36350 DML1 RPL24A GAMMA-TIP MAT3 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 PDE328 PnsL1 RCA LHCB4.3 AT2G40400 HEME2 ATKT2 AT2G40660 ARR16 CYP98A3 AT2G43030 AT2G43560 AT2G44120 CHL-CPN10 AT2G44920 AT2G45700 CPFTSY SPA1 PSAP PHR2 ATBCA1 EMB2768 ATF1 PDE326 PDE324 EMB3119 AT3G04840 RPL18 AT3G06700 AT3G07110 ATYLMG1-1 AT3G09200 PTAC13 AT3G09250 AT3G09630 ADK1 LGO GYRA AT3G11510 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 ATPME3 PRPS20 ATHM4 AT3G15520 ADS3 MFP1 AT3G16080 PSAH-1 NDF4 ATEBP AT3G16780 POK1 RACK1C MOS4 EMB1865 AtTic62 ATCAD4 CBB1 ATTCP-1 ATTOP6B PSBTN AT3G22150 AT3G22210 ARLIM15 ATCFM3A AT3G23700 ATTOPII AT3G23940 ATMSH1 HCF101 ATMSH7 PLSP1 ATL5 AtCHUP1 LTA2 RPL15 ATPRX GAPA CCB1 ATTSO2 AT3G27180 PTAC16 AT3G47070 AT3G47370 ATNOA1 AT3G47650 EDD AT3G48200 ATBT2 AT3G48420 PDE312 GSA2 ATBBC1 RDR6 OEC33 AT3G51280 AT3G51290 ATSSL4 ATEBP1 ATG4 FTSZ2-2 AT3G53430 CP29 HCEF1 FLN1 HTA11 LHCA1 PPL1 ATDFD SBPASE ACSF ATBZIP61 AT3G58140 AT3G58610 AT3G59780 CUM2 AT3G61870 CYP20-3 ATDUF7 AT3G62870 CSP41A OEP6 AtcpRRF EMB3126 ANTR2 AT4G00895 TROL GLB1 AT4G02530 PSAD-1 EMB3129 AT4G02840 BSM PETC ATPC1 ATK5 APX4 ATPD LHCB5 AT4G11100 AT4G11175 PSAL AT4G12830 NYC1 AT4G14330 ATTCX2 FdC1 AT4G15000 IAGLU AtCLA1 AT4G17390 AT4G17560 LIL3:1 CH-42 AK-HSDH MORF1 PSBQ ATML1 PGR5-LIKE AT4G24350 AT4G24750 ATRBP31 AT4G24820 AT4G24830 ACP4 CHLM AT4G26370 AtFBA5 MAP65-2 AR192 AT4G27090 PORB NARA5 AT4G28080 PSAE-1 AT4G28780 emb2726 AT4G29360 AT4G30825 FAD6 RPS6 PGR3 PDE334 AT4G32340 AtGLDP1 SEP1 BLH6 SSR16 AT4G34730 MRL1 HCF244 LTO1 AT4G36390 BEE2 SHM1 pde191 AtFBA2 AT4G39040 ATCAD9 ATPDX1 LHCB4.1 AT5G02160 AT5G02870 ADK2 54CP GYRB2 FD-GOGAT BTR1 AT5G05200 ATEIF2-A2 2-Cys AT5G07020 ATRPA70B AT5G08050 HEMC FTRA2 AT5G09510 AtPPa6 PMDH2 AT5G10920 OCP3 PPD5 AT5G11480 ATGSL12 EMB3136 ABAR SVR3 EMB3137 BETA AT5G14910 ATMIXTA AT5G16130 ENH1 ATOBGC PCB2 STT3A ATIPT9 AT5G20290 CRR42 AT5G22340 AT5G22440 EMB1030 HCF136 AT5G23650 APRR5 AT5G25590 ARRPS1 AT5G35170 CAC2 ATGSL1 G6PD1 AT5G36160 ATPRFB AT5G37010 AT5G38520 CRR7 UDG4 OLI7 ATPHB3 FTSH5 AGO10 AT5G44520 CLPP4 CHL AT5G46420 AT5G46580 AT5G47190 AT5G47210 NF-YB2 AT5G48360 LPA66 EMB2812 OVA2 DDM2 AT5G51110 DYAD ATMAP65-3 At-NEET ATPGMP AT5G52780 AT5G52960 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. THI1 AT5G55220 ATFTSZ1-1 CRR21 CSN6A AT5G56670 AT5G56850 GATA21 NdhN AT5G58330 AT5G59850 ATPDX2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ATNDPK2 GSA1 SHA1 CHR24 PSAN ATERS EMB3144 AT5G65220 KAC2 ATLFNR1 AT5G66470 GAMMA MSP-1 ATDDM1 PSBA MATK RPS16 RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBE ORF31 PETG PSAJ RPL33 RPS18 RPL20 CLPP1 PSBB PSBT PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 NDHF RPL32 YCF5 NDHD PSAC NDHE NDHG NDHI NDHA RPS15
GO:0044255
cellular lipid metabolic process		BP6.036e-56AT1G01080 CYP86A4 ATGPAT4 AT1G02150 POR AT1G04420 emb2394 ADS1 EMB2784 ALB-1V ABC1 AVDE1 CJD1 AT1G09130 CRB Z-ISO ATFD1 CLPP6 AT1G11860 AT1G12800 AT1G14270 AT1G14345 NDF1 FUG1 AT1G18660 LHCA2*1 AOAT1 AOR ATPEX7 FdC2 PRPL11 GAPB AT1G49380 GDC1 ABA2 AtFAP3 ACP2 AtTLP18.3 CPN60B AT1G57770 AT1G60890 AT1G62780 BDG1 AT1G65230 ABA4 ATKCR1 PSRP3/1 EDA17 AT1G74070 emb2184 ATKS XERICO ENR1 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 SCPL8 AT2G24060 ATHO1 AT2G27680 PY AtFAD3 ATFC-II ATCB5-B PRPL28 EDA3 AT2G35410 AT2G37660 CAC3 AT2G42130 AT2G43030 AT2G43560 AT2G44920 CPFTSY CYP86A8 CER8 PHR2 DEG2 EMB2768 ATF1 PDE326 EMB3119 PTAC13 AT3G09860 AtLCY Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST PGK1 AT3G12930 AT3G13120 ESM1 AT3G15520 ADS3 MFP1 NDF4 AT3G16370 AAE7 EMB1865 AT3G18940 AT3G23700 HCF101 LAG1 AT3G25660 AT3G25805 LTA2 ATPRX ORF02 CCB1 LTPG2 RPL9 PTAC16 ATNOA1 AT3G47650 AT3G48420 ATG4 PSRP2 CP33 HCEF1 AT3G54210 ATTSC13 SBPASE UGP3 ACSF AT3G58140 AT3G59780 AT3G60750 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 TROL AT4G01310 GLB1 AT4G02530 EMB3129 ATPC1 APX4 ATPD ATSPS4F AT4G10300 FdC1 CYP97B3 AtCLA1 AT4G17560 LIL3:1 AT4G17740 ATSS4 CH-42 ATRAB8D CER2 PGI AT4G24750 AT4G24820 ACP4 CHLM B1 NARA5 AT4G28080 PSB28 emb2726 FAD6 PGR3 AtGLDP1 SEP1 MRL1 HCF244 LTO1 AT4G36390 MAP1D AtFBA2 AT4G39040 54CP FD-GOGAT KCS19 AtFAD8 ATEGY2 AT5G07020 HEMC FTRA2 PMDH2 PAS2 PPD5 EMB3137 AT5G14910 BCCP2 AT5G16240 AT5G17670 PCB2 ATCPN21 HCF136 SQE5 ATSS1 ARRPS1 CAC2 G6PD1 NDH18 CLPP4 CHL AT5G45950 KAS1 LIL3:2 OVA2 ATPGMP AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 LUT2 NdhN AtcPT4 HTB4 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ATNDPK2 AT5G66470 ABA1 ACCD NDHE
GO:0046483
heterocycle metabolic process		BP1.525e-55AT1G01320 AT1G02150 IMPA-6 ATCSLD5 emb2386 FZL ATCPO-I PSB27 POR ATHM1 AtTPX2 emb2394 ATCTL1 ORA59 RHON1 OE23 AT1G07440 PSAO ALB-1V ABC1 AVDE1 CRB ATATP-PRT2 ARR4 ATFD1 MORF9 CLPP6 AT1G12000 AT1G12230 AT1G12800 ICE2 GAPA-2 AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 RPL10 AT1G14345 ATWHY1 CENP-C NDF1 FUG1 ATARCA AT1G18540 LHCA2*1 BES1 ATCLH1 ATLFNR2 DRT112 AT1G22630 FB ATCAF2 AOR MLP423 BBX15 APT1 AT1G28530 PRK AT1G32470 FdC2 PRPL11 ATPS1 ARF20 RPL21C GAPB ARP1 CYCA1;1 CP22 Lhca5 GATB RACK1B AT1G49010 AT1G49380 UBC20 GDC1 AT1G51110 AT1G52220 PSAH-2 ABA2 AT1G52510 ATMUM4 AIN1 AT1G54500 G-H2AX AtTLP18.3 AT1G55140 PSAG AT1G56050 AT1G60590 ACO2 ATSCO1 AT1G62780 RPOD1 AT1G65230 PSBY ATHPR1 ADO3 BBX14 FLN2 HEMB1 CMT3 AT1G70200 AT1G70820 AT1G72250 ATHDG11 BEE3 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PDE343 emb2184 AT1G75460 LQY1 ATGSTU20 AT1G78995 RECA1 APT2 ARR14 WRKY3 ABH1 OTP51 AT2G16365 PFU2 AT2G17972 HBI1 SCY1 AT2G19870 ATCAF1 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI ATSULA AtFBA1 AT2G21530 AT2G21960 IAA8 SCPL8 AT2G24060 PRPL35 AT2G26500 ATHO1 AT2G27680 HDA13 ATPCNA2 PY AT2G30320 ATFC-II PSBW ATGSTF7 FTSH2 AT2G32060 PRORP1 ATCOP1 AT2G33370 DAL HMR NF-YA4 EDA3 GTE01 GDCH AT2G35410 AT2G36350 DML1 RPL24A MAT3 AT2G37660 PDE328 PnsL1 LHCB4.3 AT2G40400 HEME2 ATKT2 AT2G40660 ARR16 CYP98A3 AT2G43030 BIO2 AT2G43560 COS1 AT2G44120 CHL-CPN10 AT2G44920 AT2G45700 CPFTSY SPA1 PSAP PHR2 ATBCA1 EMB2768 ATF1 PDE326 PDE324 EMB3119 AT3G04840 RPL18 AT3G06700 AT3G07110 ATYLMG1-1 AT3G09200 PTAC13 AT3G09250 AT3G09630 ADK1 LGO GYRA AT3G11510 PGK1 AT3G13120 ESM1 ATPME3 PRPS20 ATHM4 AT3G15520 ADS3 MFP1 AT3G16080 PSAH-1 NDF4 ATEBP AT3G16780 POK1 RACK1C MOS4 EMB1865 AtTic62 ATTCP-1 ATTOP6B PSBTN AT3G22150 AT3G22210 ARLIM15 ATCFM3A AT3G23700 ATTOPII AT3G23940 ATMSH1 HCF101 ATMSH7 PLSP1 ATL5 AtCHUP1 LTA2 RPL15 ATPRX GAPA CCB1 ATTSO2 AT3G27180 PTAC16 AT3G47070 AT3G47370 ATNOA1 AT3G47650 EDD AT3G48200 ATBT2 AT3G48420 PDE312 GSA2 ATBBC1 RDR6 OEC33 AT3G51280 AT3G51290 ATSSL4 ATEBP1 ATG4 FTSZ2-2 AT3G53430 CP29 HCEF1 FLN1 HTA11 LHCA1 PPL1 ATDFD SBPASE ACSF ATBZIP61 AT3G58140 AT3G58610 AT3G59780 CUM2 AT3G61870 CYP20-3 ATDUF7 AT3G62870 CSP41A OEP6 AtcpRRF APG1 EMB3126 ANTR2 AT4G00895 TROL GLB1 AT4G02530 PSAD-1 EMB3129 AT4G02840 BSM PETC ATPC1 ATK5 APX4 ATPD LHCB5 AT4G11100 AT4G11175 PSAL AT4G12830 NYC1 AT4G14330 ATTCX2 FdC1 AT4G15000 AtCLA1 AT4G17390 AT4G17560 LIL3:1 CH-42 AK-HSDH MORF1 PSBQ ATML1 PGR5-LIKE AT4G24350 AT4G24750 ATRBP31 AT4G24820 AT4G24830 ACP4 CHLM AT4G26370 AtFBA5 MAP65-2 AR192 AT4G27090 PORB NARA5 AT4G28080 PSAE-1 AT4G28780 emb2726 AT4G29360 AT4G30825 FAD6 RPS6 PGR3 PDE334 AT4G32340 AtGLDP1 SEP1 BLH6 SSR16 AT4G34730 MRL1 HCF244 LTO1 AT4G36390 BEE2 pde191 AtFBA2 AT4G39040 ATPDX1 LHCB4.1 AT5G02160 AT5G02870 ADK2 54CP GYRB2 BTR1 AT5G05200 ATEIF2-A2 2-Cys AT5G07020 ATRPA70B AT5G08050 HEMC FTRA2 AT5G09510 AtPPa6 PMDH2 AT5G10920 OCP3 PPD5 AT5G11480 ATGSL12 EMB3136 ABAR SVR3 EMB3137 AT5G14910 ATMIXTA AT5G16130 ENH1 ATOBGC PCB2 STT3A ATIPT9 AT5G20290 CRR42 AT5G22440 EMB1030 HCF136 AT5G23650 APRR5 AT5G25590 ARRPS1 AT5G35170 CAC2 ATGSL1 G6PD1 ATPRFB AT5G37010 AT5G38520 CRR7 UDG4 OLI7 ATPHB3 FTSH5 AGO10 AT5G44520 CLPP4 CHL AT5G46420 AT5G47190 AT5G47210 NF-YB2 AT5G48360 LPA66 EMB2812 OVA2 DDM2 AT5G51110 DYAD ATMAP65-3 At-NEET ATPGMP AT5G52780 AT5G52960 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. THI1 AT5G55220 ATFTSZ1-1 CRR21 CSN6A AT5G56670 AT5G56850 GATA21 NdhN AT5G58330 AT5G59850 ATPDX2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ALDH12A1 ATNDPK2 GSA1 SHA1 CHR24 PSAN ATERS EMB3144 AT5G65220 KAC2 ATLFNR1 AT5G66470 GAMMA MSP-1 ATDDM1 PSBA MATK RPS16 RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBE ORF31 PETG PSAJ RPL33 RPS18 RPL20 CLPP1 PSBB PSBT PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 NDHF RPL32 YCF5 NDHD PSAC NDHE NDHG NDHI NDHA RPS15
GO:0055086
nucleobase-containing small molecule met...		BP5.051e-54POR ATHM1 emb2394 AT1G07440 PSAO ABC1 AVDE1 CRB ATFD1 AT1G12230 AT1G12800 AT1G13730 PnsL2 AT1G14345 NDF1 ATARCA LHCA2*1 ATLFNR2 DRT112 AT1G22630 AOR APT1 AT1G28530 PRK AT1G32470 FdC2 GAPB RACK1B GDC1 AT1G51110 ATMUM4 PSAG ATSCO1 AT1G62780 AT1G65230 FLN2 HEMB1 AT1G70820 emb2184 LQY1 APT2 ATSULA AtFBA1 AT2G21530 AT2G21960 SCPL8 PRPL35 AT2G27680 HDA13 PY ATFC-II FTSH2 EDA3 GDCH MAT3 AT2G40660 AT2G43560 AT2G44920 PSAP ATBCA1 ATF1 EMB3119 AT3G04840 RPL18 ATYLMG1-1 AT3G09630 ADK1 GYRA PGK1 ESM1 ATHM4 MFP1 NDF4 AT3G16780 RACK1C ATTCP-1 AT3G22210 AT3G23700 AT3G23940 HCF101 ATL5 LTA2 ATTSO2 PTAC16 AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATEBP1 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G58610 AT3G59780 AT3G61870 CYP20-3 CSP41A AtcpRRF EMB3126 ANTR2 AT4G00895 TROL GLB1 AT4G02530 PETC ATPC1 APX4 ATPD FdC1 AtCLA1 AT4G17390 LIL3:1 AK-HSDH PGR5-LIKE AT4G24350 AT4G24830 AtFBA5 AR192 FAD6 PGR3 PDE334 AtGLDP1 SEP1 LTO1 AtFBA2 ATPDX1 AT5G02870 ADK2 ATEIF2-A2 2-Cys AT5G08050 HEMC PMDH2 AT5G10920 AT5G14910 ENH1 PCB2 ATIPT9 HCF136 ARRPS1 AT5G35170 ATGSL1 G6PD1 UDG4 OLI7 FTSH5 AT5G44520 AT5G47210 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 ATFTSZ1-1 CSN6A NdhN ATNDPK2 PSAN ATLFNR1 GAMMA ATPA ATPF ATPH ATPI ATPE ATPB NDHF NDHD NDHE
GO:0019693
ribose phosphate metabolic process		BP5.773e-54POR ATHM1 emb2394 AT1G07440 PSAO ABC1 AVDE1 CRB ATFD1 AT1G12230 AT1G12800 PnsL2 AT1G14345 NDF1 ATARCA LHCA2*1 ATLFNR2 DRT112 AT1G22630 AT1G28530 PRK AT1G32470 FdC2 GAPB RACK1B GDC1 AT1G51110 ATSCO1 AT1G62780 AT1G65230 FLN2 HEMB1 emb2184 LQY1 ATSULA AtFBA1 AT2G21530 AT2G21960 PRPL35 AT2G27680 PY ATFC-II FTSH2 EDA3 GDCH AT2G40660 AT2G43560 AT2G44920 PSAP ATBCA1 ATF1 EMB3119 AT3G04840 RPL18 ATYLMG1-1 AT3G09630 GYRA PGK1 ESM1 ATHM4 MFP1 NDF4 AT3G16780 RACK1C ATTCP-1 AT3G22210 AT3G23700 AT3G23940 HCF101 ATL5 PTAC16 AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATEBP1 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G59780 AT3G61870 CSP41A AtcpRRF EMB3126 ANTR2 AT4G00895 AT4G02530 PETC ATPC1 APX4 ATPD FdC1 AT4G17390 LIL3:1 PGR5-LIKE AtFBA5 AR192 PGR3 PDE334 AtGLDP1 SEP1 LTO1 AtFBA2 ATPDX1 AT5G02870 ATEIF2-A2 2-Cys AT5G08050 HEMC PMDH2 AT5G14910 ENH1 PCB2 HCF136 ARRPS1 ATGSL1 G6PD1 OLI7 FTSH5 AT5G44520 AT5G47210 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 ATFTSZ1-1 NdhN ATNDPK2 PSAN ATLFNR1 GAMMA ATPA ATPF ATPH ATPI ATPE ATPB NDHF NDHD NDHE
GO:0009117
nucleotide metabolic process		BP9.856e-54POR ATHM1 emb2394 AT1G07440 PSAO ABC1 AVDE1 CRB ATFD1 AT1G12230 AT1G12800 AT1G13730 PnsL2 AT1G14345 NDF1 ATARCA LHCA2*1 ATLFNR2 DRT112 AT1G22630 AOR AT1G28530 PRK AT1G32470 FdC2 GAPB RACK1B GDC1 AT1G51110 ATMUM4 PSAG ATSCO1 AT1G62780 AT1G65230 FLN2 HEMB1 AT1G70820 emb2184 LQY1 ATSULA AtFBA1 AT2G21530 AT2G21960 SCPL8 PRPL35 AT2G27680 HDA13 PY ATFC-II FTSH2 EDA3 GDCH AT2G40660 AT2G43560 AT2G44920 PSAP ATBCA1 ATF1 EMB3119 AT3G04840 RPL18 ATYLMG1-1 AT3G09630 GYRA PGK1 ESM1 ATHM4 MFP1 NDF4 AT3G16780 RACK1C ATTCP-1 AT3G22210 AT3G23700 AT3G23940 HCF101 ATL5 LTA2 ATTSO2 PTAC16 AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATEBP1 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G58610 AT3G59780 AT3G61870 CYP20-3 CSP41A AtcpRRF EMB3126 ANTR2 AT4G00895 TROL GLB1 AT4G02530 PETC ATPC1 APX4 ATPD FdC1 AtCLA1 AT4G17390 LIL3:1 AK-HSDH PGR5-LIKE AT4G24830 AtFBA5 AR192 FAD6 PGR3 PDE334 AtGLDP1 SEP1 LTO1 AtFBA2 ATPDX1 AT5G02870 ATEIF2-A2 2-Cys AT5G08050 HEMC PMDH2 AT5G10920 AT5G14910 ENH1 PCB2 ATIPT9 HCF136 ARRPS1 AT5G35170 ATGSL1 G6PD1 UDG4 OLI7 FTSH5 AT5G44520 AT5G47210 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 ATFTSZ1-1 CSN6A NdhN ATNDPK2 PSAN ATLFNR1 GAMMA ATPA ATPF ATPH ATPI ATPE ATPB NDHF NDHD NDHE
GO:0006753
nucleoside phosphate metabolic process		BP1.420e-53POR ATHM1 emb2394 AT1G07440 PSAO ABC1 AVDE1 CRB ATFD1 AT1G12230 AT1G12800 AT1G13730 PnsL2 AT1G14345 NDF1 ATARCA LHCA2*1 ATLFNR2 DRT112 AT1G22630 AOR AT1G28530 PRK AT1G32470 FdC2 GAPB RACK1B GDC1 AT1G51110 ATMUM4 PSAG ATSCO1 AT1G62780 AT1G65230 FLN2 HEMB1 AT1G70820 emb2184 LQY1 ATSULA AtFBA1 AT2G21530 AT2G21960 SCPL8 PRPL35 AT2G27680 HDA13 PY ATFC-II FTSH2 EDA3 GDCH AT2G40660 AT2G43560 AT2G44920 PSAP ATBCA1 ATF1 EMB3119 AT3G04840 RPL18 ATYLMG1-1 AT3G09630 GYRA PGK1 ESM1 ATHM4 MFP1 NDF4 AT3G16780 RACK1C ATTCP-1 AT3G22210 AT3G23700 AT3G23940 HCF101 ATL5 LTA2 ATTSO2 PTAC16 AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATEBP1 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G58610 AT3G59780 AT3G61870 CYP20-3 CSP41A AtcpRRF EMB3126 ANTR2 AT4G00895 TROL GLB1 AT4G02530 PETC ATPC1 APX4 ATPD FdC1 AtCLA1 AT4G17390 LIL3:1 AK-HSDH PGR5-LIKE AT4G24830 AtFBA5 AR192 FAD6 PGR3 PDE334 AtGLDP1 SEP1 LTO1 AtFBA2 ATPDX1 AT5G02870 ATEIF2-A2 2-Cys AT5G08050 HEMC PMDH2 AT5G10920 AT5G14910 ENH1 PCB2 ATIPT9 HCF136 ARRPS1 AT5G35170 ATGSL1 G6PD1 UDG4 OLI7 FTSH5 AT5G44520 AT5G47210 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 ATFTSZ1-1 CSN6A NdhN ATNDPK2 PSAN ATLFNR1 GAMMA ATPA ATPF ATPH ATPI ATPE ATPB NDHF NDHD NDHE
GO:0034641
cellular nitrogen compound metabolic pro...		BP5.080e-53AT1G01320 AT1G02150 IMPA-6 ATCSLD5 emb2386 FZL ATCPO-I PSB27 POR ATHM1 AtTPX2 emb2394 ORA59 RHON1 OE23 AT1G07440 PSAO ALB-1V ABC1 AVDE1 CRB ATATP-PRT2 ARR4 ATFD1 MORF9 CLPP6 AT1G12000 AT1G12230 AT1G12800 ICE2 GAPA-2 AT1G13730 PnsL2 RPL10 AT1G14345 ATWHY1 CENP-C NDF1 FUG1 ATARCA AT1G18540 LHCA2*1 BES1 ATCLH1 ATLFNR2 DRT112 AT1G22630 FB ATCAF2 AOR MLP423 BBX15 APT1 AT1G28530 PRK AT1G32470 FdC2 PRPL11 ATPS1 ARF20 RPL21C GAPB ARP1 CYCA1;1 CP22 Lhca5 GATB RACK1B AT1G49010 AT1G49380 UBC20 GDC1 AT1G51110 AT1G52220 PSAH-2 AT1G52510 ATMUM4 AIN1 AT1G54500 G-H2AX AtTLP18.3 AT1G55140 PSAG AT1G56050 AT1G60590 ATSCO1 AT1G62780 RPOD1 AT1G65230 PSBY ATHPR1 ADO3 BBX14 FLN2 HEMB1 CMT3 AT1G70200 AT1G70820 AT1G72250 ATHDG11 BEE3 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PDE343 emb2184 AT1G75460 LQY1 ATGSTU20 AT1G78995 RECA1 APT2 ARR14 WRKY3 ABH1 OTP51 AT2G16365 PFU2 AT2G17972 HBI1 SCY1 AT2G19870 ATCAF1 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI ATSULA AtFBA1 AT2G21530 AT2G21960 IAA8 SCPL8 AT2G24060 PRPL35 AT2G26500 ATHO1 AT2G27680 HDA13 ATPCNA2 PY AT2G30320 ATFC-II PSBW ATGSTF7 FTSH2 AT2G32060 PRORP1 ATCOP1 AT2G33370 DAL HMR NF-YA4 EDA3 GTE01 GDCH AT2G35410 AT2G36350 DML1 RPL24A GAMMA-TIP MAT3 AT2G37660 PDE328 PnsL1 LHCB4.3 AT2G40400 HEME2 ATKT2 AT2G40660 ARR16 AT2G43030 BIO2 AT2G43560 COS1 AT2G44120 CHL-CPN10 AT2G44920 AT2G45700 CPFTSY SPA1 PSAP PHR2 ATBCA1 EMB2768 ATF1 PDE326 PDE324 EMB3119 AT3G04840 RPL18 AT3G06700 AT3G07110 ATYLMG1-1 AT3G08740 AT3G09200 PTAC13 AT3G09250 AT3G09630 ADK1 LGO GYRA AT3G11510 PGK1 AT3G13120 ESM1 ATPME3 PRPS20 ATHM4 AT3G15520 ADS3 MFP1 AT3G16080 PSAH-1 NDF4 ATEBP AT3G16780 POK1 RACK1C MOS4 EMB1865 AtTic62 ATTCP-1 ATTOP6B PSBTN AT3G22150 AT3G22210 ARLIM15 ATCFM3A AT3G23700 ATTOPII AT3G23940 ATMSH1 HCF101 ATMSH7 PLSP1 ATL5 AtCHUP1 LTA2 RPL15 ATPRX GAPA CCB1 ATTSO2 AT3G27180 PTAC16 AT3G47070 AT3G47370 ATNOA1 AT3G47650 EDD AT3G48200 ATBT2 AT3G48420 PDE312 GSA2 ATBBC1 RDR6 OEC33 AT3G51280 AT3G51290 ATSSL4 ATEBP1 ATG4 FTSZ2-2 AT3G53430 CP29 HCEF1 FLN1 HTA11 ATGR2 LHCA1 PPL1 ATDFD SBPASE ACSF ATBZIP61 AT3G58140 AT3G58610 AT3G59780 CUM2 AT3G61870 CYP20-3 ATDUF7 AT3G62870 CSP41A OEP6 AtcpRRF EMB3126 ANTR2 AT4G00895 TROL GLB1 AT4G02530 PSAD-1 EMB3129 AT4G02840 BSM PETC ATPC1 ATK5 APX4 ATPD LHCB5 AT4G11100 AT4G11175 PSAL AT4G12830 NYC1 AT4G14330 ATTCX2 FdC1 AT4G15000 AtCLA1 AT4G17390 AT4G17560 LIL3:1 CH-42 AK-HSDH MORF1 PSBQ ATML1 PGR5-LIKE AT4G24350 AT4G24750 ATRBP31 AT4G24820 AT4G24830 ACP4 CHLM AT4G26370 AtFBA5 MAP65-2 AR192 AT4G27090 PORB NARA5 AT4G28080 PSAE-1 AT4G28780 emb2726 AT4G29360 AT4G30825 FAD6 RPS6 PGR3 PDE334 AT4G32340 AtGLDP1 SEP1 BLH6 SSR16 AT4G34730 MRL1 HCF244 LTO1 AT4G36390 BEE2 pde191 AtFBA2 AT4G39040 ATPDX1 LHCB4.1 AT5G02160 AT5G02870 ADK2 54CP GYRB2 BTR1 AT5G05200 ATEIF2-A2 2-Cys AT5G07020 ATRPA70B AT5G08050 HEMC FTRA2 AT5G09510 AtPPa6 PMDH2 AT5G10920 OCP3 PPD5 AT5G11480 ATGSL12 EMB3136 ABAR SVR3 EMB3137 AT5G14910 ATMIXTA AT5G16130 ENH1 ATOBGC PCB2 STT3A ATIPT9 AT5G20290 CRR42 AT5G22440 EMB1030 HCF136 AT5G23650 APRR5 AT5G25590 ARRPS1 AT5G35170 ATGSL1 G6PD1 ATPRFB AT5G37010 AT5G38520 CRR7 UDG4 OLI7 ATPHB3 FTSH5 AGO10 AT5G44520 CLPP4 CHL AT5G46420 AT5G47190 AT5G47210 NF-YB2 AT5G48360 LPA66 EMB2812 OVA2 DDM2 AT5G51110 DYAD ATMAP65-3 At-NEET ATPGMP AT5G52780 AT5G52960 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. THI1 AT5G55220 ATFTSZ1-1 CRR21 CSN6A AT5G56670 AT5G56850 GATA21 NdhN AT5G58330 AT5G59850 ATPDX2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ATNDPK2 GSA1 SHA1 CHR24 PSAN ATERS EMB3144 AT5G65220 KAC2 ATLFNR1 AT5G66470 GAMMA MSP-1 ATDDM1 PSBA MATK RPS16 RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBE ORF31 PETG PSAJ RPL33 RPS18 RPL20 CLPP1 PSBB PSBT PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 NDHF RPL32 YCF5 NDHD PSAC NDHE NDHG NDHI NDHA RPS15
GO:0006139
nucleobase-containing compound metabolic...		BP2.387e-52AT1G01320 AT1G02150 IMPA-6 ATCSLD5 emb2386 FZL ATCPO-I PSB27 POR ATHM1 AtTPX2 emb2394 ORA59 RHON1 OE23 AT1G07440 PSAO ABC1 AVDE1 CRB ARR4 ATFD1 MORF9 CLPP6 AT1G12000 AT1G12230 AT1G12800 ICE2 GAPA-2 AT1G13730 PnsL2 RPL10 AT1G14345 ATWHY1 CENP-C NDF1 FUG1 ATARCA AT1G18540 LHCA2*1 BES1 ATCLH1 ATLFNR2 DRT112 AT1G22630 FB ATCAF2 AOR MLP423 BBX15 APT1 AT1G28530 PRK AT1G32470 FdC2 PRPL11 ATPS1 ARF20 RPL21C GAPB ARP1 CYCA1;1 CP22 Lhca5 GATB RACK1B AT1G49010 AT1G49380 UBC20 GDC1 AT1G51110 AT1G52220 PSAH-2 AT1G52510 ATMUM4 AIN1 AT1G54500 G-H2AX AtTLP18.3 AT1G55140 PSAG AT1G60590 ATSCO1 AT1G62780 RPOD1 AT1G65230 PSBY ATHPR1 ADO3 BBX14 FLN2 HEMB1 CMT3 AT1G70200 AT1G70820 AT1G72250 ATHDG11 BEE3 AT1G74070 PDE343 emb2184 AT1G75460 LQY1 AT1G78995 RECA1 APT2 ARR14 WRKY3 ABH1 OTP51 AT2G16365 PFU2 AT2G17972 HBI1 SCY1 AT2G19870 ATCAF1 PSB29 ATSULA AtFBA1 AT2G21530 AT2G21960 IAA8 SCPL8 AT2G24060 PRPL35 AT2G26500 AT2G27680 HDA13 ATPCNA2 PY AT2G30320 ATFC-II PSBW FTSH2 AT2G32060 PRORP1 ATCOP1 AT2G33370 DAL HMR NF-YA4 EDA3 GTE01 GDCH AT2G35410 AT2G36350 DML1 RPL24A MAT3 AT2G37660 PDE328 PnsL1 LHCB4.3 ATKT2 AT2G40660 ARR16 AT2G43030 AT2G43560 AT2G44120 AT2G44920 AT2G45700 CPFTSY SPA1 PSAP PHR2 ATBCA1 EMB2768 ATF1 PDE326 PDE324 EMB3119 AT3G04840 RPL18 AT3G06700 AT3G07110 ATYLMG1-1 AT3G09200 PTAC13 AT3G09250 AT3G09630 ADK1 LGO GYRA AT3G11510 PGK1 AT3G13120 ESM1 PRPS20 ATHM4 AT3G15520 MFP1 AT3G16080 PSAH-1 NDF4 ATEBP AT3G16780 POK1 RACK1C MOS4 EMB1865 AtTic62 ATTCP-1 ATTOP6B PSBTN AT3G22150 AT3G22210 ARLIM15 ATCFM3A AT3G23700 ATTOPII AT3G23940 ATMSH1 HCF101 ATMSH7 PLSP1 ATL5 AtCHUP1 LTA2 RPL15 ATPRX GAPA CCB1 ATTSO2 AT3G27180 PTAC16 AT3G47070 AT3G47370 ATNOA1 AT3G47650 EDD AT3G48200 ATBT2 AT3G48420 PDE312 GSA2 ATBBC1 RDR6 OEC33 AT3G51280 AT3G51290 ATSSL4 ATEBP1 ATG4 FTSZ2-2 AT3G53430 CP29 HCEF1 FLN1 HTA11 LHCA1 PPL1 SBPASE ACSF ATBZIP61 AT3G58140 AT3G58610 AT3G59780 CUM2 AT3G61870 CYP20-3 ATDUF7 AT3G62870 CSP41A OEP6 AtcpRRF EMB3126 ANTR2 AT4G00895 TROL GLB1 AT4G02530 PSAD-1 EMB3129 AT4G02840 BSM PETC ATPC1 ATK5 APX4 ATPD LHCB5 AT4G11100 AT4G11175 PSAL AT4G12830 AT4G14330 ATTCX2 FdC1 AT4G15000 AtCLA1 AT4G17390 AT4G17560 LIL3:1 CH-42 AK-HSDH MORF1 PSBQ ATML1 PGR5-LIKE AT4G24350 AT4G24750 ATRBP31 AT4G24820 AT4G24830 ACP4 CHLM AT4G26370 AtFBA5 MAP65-2 AR192 AT4G27090 PORB NARA5 AT4G28080 PSAE-1 AT4G28780 emb2726 AT4G29360 AT4G30825 FAD6 RPS6 PGR3 PDE334 AT4G32340 AtGLDP1 SEP1 BLH6 SSR16 AT4G34730 MRL1 HCF244 LTO1 AT4G36390 BEE2 pde191 AtFBA2 AT4G39040 ATPDX1 LHCB4.1 AT5G02160 AT5G02870 ADK2 54CP GYRB2 BTR1 ATEIF2-A2 2-Cys AT5G07020 ATRPA70B AT5G08050 HEMC FTRA2 AT5G09510 PMDH2 AT5G10920 OCP3 PPD5 AT5G11480 ATGSL12 EMB3136 SVR3 EMB3137 AT5G14910 ATMIXTA AT5G16130 ENH1 ATOBGC PCB2 STT3A ATIPT9 AT5G20290 CRR42 AT5G22440 EMB1030 HCF136 AT5G23650 APRR5 AT5G25590 ARRPS1 AT5G35170 ATGSL1 G6PD1 ATPRFB AT5G37010 AT5G38520 CRR7 UDG4 OLI7 ATPHB3 FTSH5 AGO10 AT5G44520 CLPP4 AT5G46420 AT5G47190 AT5G47210 NF-YB2 AT5G48360 LPA66 EMB2812 OVA2 DDM2 AT5G51110 DYAD ATMAP65-3 At-NEET ATPGMP AT5G52780 AT5G52960 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G55220 ATFTSZ1-1 CRR21 CSN6A AT5G56670 AT5G56850 GATA21 NdhN AT5G58330 AT5G59850 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ATNDPK2 GSA1 SHA1 CHR24 PSAN ATERS EMB3144 AT5G65220 KAC2 ATLFNR1 AT5G66470 GAMMA MSP-1 ATDDM1 PSBA MATK RPS16 RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBE ORF31 PETG PSAJ RPL33 RPS18 RPL20 CLPP1 PSBB PSBT PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 NDHF RPL32 YCF5 NDHD PSAC NDHE NDHG NDHI NDHA RPS15
GO:0009069
serine family amino acid metabolic proce...		BP3.621e-52ATCPO-I POR ATCTL1 OE23 EMB2784 PSAO AVDE1 AT1G09310 AT1G11860 AT1G12230 AT1G12800 CP24 DRT112 AOAT1 AOR PSAK PSAF ATROPGEF14 ACBP PRK AT1G32470 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 PSAH-2 AtTLP18.3 AGP21 AT1G55360 PSAG AT1G56190 AT1G60000 LHCA3 ACO2 PSBY ATHPR1 AT1G68260 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PSBR PDTPI AtFBA1 SCPL8 AtGLDP2 AT2G27680 ATGSTF7 GDCH PnsL1 AT2G42220 EMB3119 ADK1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 ATPME3 CBB1 ATSAHH2 LTA2 ATPRX GAMMA-TIP2 GSA2 ATG4 FTSZ2-2 AtPIP2;1 AT3G54400 SBPASE ACSF AT3G60750 CYP20-3 TROL AT4G01310 GLB1 PSAD-1 ATPC1 LHCB5 SHM4 AtCLA1 CER2 MSRA4 ACYB-2 PORB PSAE-1 FAD6 AtGLDP1 KUP5 SHM1 ATPRP4 AtFBA2 HEMC AtPPa6 PMDH2 PAS2 TUB6 GASA4 PCB2 ATCPN21 ATGSL1 APE2 TET1 GSA1 PSAN MSP-1 NDHE
GO:0016053
organic acid biosynthetic process		BP3.978e-52ATCPO-I POR ATCTL1 ADS1 OE23 EMB2784 PSAO AVDE1 AT1G09310 CRB ATATP-PRT2 ATFD1 MORF9 CLPP6 AT1G11860 AT1G12230 AT1G12800 CP24 ATLFNR2 DRT112 AOAT1 AOR PSAK ATIMD3 PSAF CXC750 ATROPGEF14 ACBP PRK AT1G32470 FdC2 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 AT1G51110 PSAH-2 ABA2 ACP2 AtTLP18.3 AGP21 AT1G55360 PSAG AT1G56190 AT1G60000 LHCA3 ACO2 BDG1 ABA4 ATKCR1 PSBY ATHPR1 AT1G68260 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATGSTU20 PSBR ATKS ATIMD2 WIN1 ENR1 ABH1 AT2G17033 PDTPI AtFBA1 SCPL8 AT2G24060 AT2G27680 AtFAD3 ATGSTF7 GDCH Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 CAC3 PnsL1 RCA ATKT2 AT2G42220 AT2G43090 BIO2 CHL-CPN10 AT2G44920 ATPMM CER8 ATBCA1 EMB3119 ADK1 OMR1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 ATPME3 ATHM4 ADS3 CBB1 ATSAHH2 AT3G23940 LTA2 ATPRX GAMMA-TIP2 AHAS GSA2 ATG4 FTSZ2-2 AtPIP2;1 AT3G53580 AT3G54400 ATDFD SBPASE ACSF AT3G58610 AT3G60750 CYP20-3 AtcpRRF EMB3126 TROL AT4G01310 GLB1 AT4G02530 PSAD-1 PETC ATPC1 ATPD LHCB5 AtCLA1 CH-42 AK-HSDH CER2 ATRBP31 AT4G24830 ACP4 ACYB-2 B1 AT4G26370 PORB PSAE-1 FAD6 PDE334 AtGLDP1 KUP5 AT4G36390 SHM1 ATPRP4 AtFBA2 AT4G39040 PLAT1 FD-GOGAT KCS19 AtFAD8 2-Cys HEMC FTRA2 AtPPa6 PMDH2 PAS2 AT5G10920 TUB6 AK ATIMD1 BETA GASA4 BCCP2 AT5G16240 ATCIMS PCB2 ATCPN21 AT5G22340 CAC2 ATGSL1 AT5G36160 UDG4 APE2 KAS1 AT5G46580 TET1 AT5G51110 AT5G52960 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. GSA1 PSAN ATLFNR1 MSP-1 ABA1 ACCD NDHE
GO:0046394
carboxylic acid biosynthetic process		BP3.978e-52ATCPO-I POR ATCTL1 ADS1 OE23 EMB2784 PSAO AVDE1 AT1G09310 CRB ATATP-PRT2 ATFD1 MORF9 CLPP6 AT1G11860 AT1G12230 AT1G12800 CP24 ATLFNR2 DRT112 AOAT1 AOR PSAK ATIMD3 PSAF CXC750 ATROPGEF14 ACBP PRK AT1G32470 FdC2 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 AT1G51110 PSAH-2 ABA2 ACP2 AtTLP18.3 AGP21 AT1G55360 PSAG AT1G56190 AT1G60000 LHCA3 ACO2 BDG1 ABA4 ATKCR1 PSBY ATHPR1 AT1G68260 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATGSTU20 PSBR ATKS ATIMD2 WIN1 ENR1 ABH1 AT2G17033 PDTPI AtFBA1 SCPL8 AT2G24060 AT2G27680 AtFAD3 ATGSTF7 GDCH Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 CAC3 PnsL1 RCA ATKT2 AT2G42220 AT2G43090 BIO2 CHL-CPN10 AT2G44920 ATPMM CER8 ATBCA1 EMB3119 ADK1 OMR1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 ATPME3 ATHM4 ADS3 CBB1 ATSAHH2 AT3G23940 LTA2 ATPRX GAMMA-TIP2 AHAS GSA2 ATG4 FTSZ2-2 AtPIP2;1 AT3G53580 AT3G54400 ATDFD SBPASE ACSF AT3G58610 AT3G60750 CYP20-3 AtcpRRF EMB3126 TROL AT4G01310 GLB1 AT4G02530 PSAD-1 PETC ATPC1 ATPD LHCB5 AtCLA1 CH-42 AK-HSDH CER2 ATRBP31 AT4G24830 ACP4 ACYB-2 B1 AT4G26370 PORB PSAE-1 FAD6 PDE334 AtGLDP1 KUP5 AT4G36390 SHM1 ATPRP4 AtFBA2 AT4G39040 PLAT1 FD-GOGAT KCS19 AtFAD8 2-Cys HEMC FTRA2 AtPPa6 PMDH2 PAS2 AT5G10920 TUB6 AK ATIMD1 BETA GASA4 BCCP2 AT5G16240 ATCIMS PCB2 ATCPN21 AT5G22340 CAC2 ATGSL1 AT5G36160 UDG4 APE2 KAS1 AT5G46580 TET1 AT5G51110 AT5G52960 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. GSA1 PSAN ATLFNR1 MSP-1 ABA1 ACCD NDHE
GO:0044283
small molecule biosynthetic process		BP3.269e-51FZL ATCPO-I POR ATCTL1 ADS1 OE23 EMB2784 PSAO AVDE1 AT1G09310 CRB ATATP-PRT2 ATFD1 MORF9 CLPP6 AT1G11860 AT1G12230 AT1G12800 CP24 ATLFNR2 DRT112 AOAT1 AOR PSAK AT1G30690 ATIMD3 PSAF CXC750 ATROPGEF14 ACBP PRK AT1G32470 FdC2 EMB3003 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 AtBGAL5 AT1G51110 PSAH-2 ABA2 ACP2 AtTLP18.3 AGP21 AT1G55360 PSAG AT1G56190 AT1G60000 LHCA3 ACO2 AT1G64650 BDG1 AT1G66130 ABA4 ATKCR1 PSBY ATHPR1 AT1G68260 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AtGH9B7 ATGSTU20 SPS1 PSBR ATKS ATIMD2 WIN1 FLA7 ENR1 ABH1 AGP9 AT2G17033 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PDTPI AtFBA1 SCPL8 AT2G24060 AT2G27680 PY AtFAD3 EMB3147 ATGSTF7 ATCB5-B NF-YA4 GDCH Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 CAC3 PnsL1 RCA ATKT2 AT2G42220 AT2G43090 BIO2 COS1 CHL-CPN10 AT2G44920 ATPMM CER8 ATBCA1 EMB3119 ADK1 OMR1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST PGK1 AT3G12930 ATPME3 ATHM4 ADS3 CBB1 PKP-ALPHA ATSAHH2 AT3G23940 ERD2B LAG1 LTA2 ATPRX GAMMA-TIP2 AT3G48460 AHAS GSA2 ATG4 FTSZ2-2 AtPIP2;1 AT3G53580 AT3G54400 ATTSC13 ATDFD SBPASE ACSF AT3G58610 AT3G60750 CYP20-3 AtcpRRF APG1 EMB3126 TROL AT4G01310 GLB1 AT4G02530 PSAD-1 PETC ATPC1 ATPD LHCB5 AtCLA1 CH-42 AK-HSDH AKT2 CER2 ATRBP31 AT4G24830 ACP4 ACYB-2 B1 AT4G26370 PORB PSAE-1 FAD6 PDE334 AtGLDP1 KUP5 AT4G36390 MAP1D SHM1 ATPRP4 AtFBA2 AT4G39040 PLAT1 ATPDX1 FD-GOGAT KCS19 AtFAD8 2-Cys HEMC FTRA2 AtPPa6 PMDH2 AGP4 PAS2 AT5G10920 TUB6 DiT1 AK ATIMD1 BETA GASA4 BCCP2 AT5G16240 ATCIMS PCB2 ATCPN21 AT5G22340 SQE5 CAC2 ATGSL1 AT5G36160 AT5G38520 UDG4 APE2 KAS1 AT5G46580 TET1 CPI1 AT5G51110 AT5G52960 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. THI1 AtcPT4 ATPDX2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. GSA1 PSAN ATLFNR1 MSP-1 ABA1 ACCD NDHE
GO:0043933
macromolecular complex subunit organizat...		BP1.575e-50IMPA-6 FZL PSB27 POR ATHM1 AtTPX2 TOR2 atTIC20 emb2394 OE23 AT1G06760 HTB1 AT1G07820 PSAO CRB CLPP6 AT1G12000 GAPA-2 AT1G14270 AT1G14345 CENP-C NDF1 HCF173 ATNACK1 AT1G19740 TUB5 ATLFNR2 LYM1 PRK AT1G32470 ATPS1 RPL21C GAPB CYCA1;1 CP22 Lhca5 AT1G49380 TUA2 UBC20 HTA10 AT1G52220 PSAH-2 AIN1 G-H2AX AtTLP18.3 ATFD2 ATSCO1 AT1G63610 PSBY ATHPR1 CMT3 AtCPB AT1G72250 AT1G72480 NRP1 AT1G74800 PDE343 emb2184 AT1G75460 LQY1 TUB1 PSBR SKU6 ABH1 OTP51 ATPRMT1A PSB29 AtFBA1 AT2G21530 IAA8 AtENODL14 AT2G26500 AT2G28720 HIS4 ATEXP6 TUB7 ATPCNA2 KIS PSBW AT2G30620 FTSH2 ARASP DAL AIR9 GDCH AT2G36350 DML1 AtAUX1 PnsL1 AT2G40660 ATOEP16-3 AT2G43030 BIO2 AT2G43560 CPFTSY PSAP AT3G02640 AAC1 PSAH-1 AT3G16780 EMB1270 ATTCP-1 ATTOP6B PSBTN ATTOPII HSP60 ATMSH1 ATMSH7 PLSP1 AtCHUP1 LTA2 GAPA CCB1 AT3G27360 AT3G43610 AT3G45850 AT3G45930 H2B HTB11 AT3G46320 AT3G47650 OEC33 AT3G51280 AT3G51290 FTSZ2-2 AT3G53730 HCEF1 HTA11 PPL1 SBPASE ACSF AT3G61870 ATDUF7 CSP41A TROL PSAD-1 PETC ATPC1 ATK5 ATPD PSAL AT4G14330 TUA6 AT4G15830 AT4G16450 AT4G17390 LIL3:1 PSBQ PGR5-LIKE 3xHMG-box2 AT4G24820 ACP4 MAP65-2 TET7 PSB28 PSAE-1 AT4G29360 AT4G30020 AtENODL15 PDE334 SEP1 HCF244 LTO1 NDH-M AtFBA2 OHP 54CP ATRPA70B PMDH2 AT5G10400 TUB6 ATGSL12 EMB3136 ENH1 TUA3 CRR42 H2B HCF136 TUB8 AT5G25590 AMOS1 ATPRFB AT5G37010 AT5G38520 APE1 CRR7 AT5G39410 ABIL4 AGO10 AtCEST CLPP4 PME5 LPA66 DDM2 CPI1 AT5G51110 ATMAP65-3 AT5G52780 AT5G52960 ATFTSZ1-1 AT5G55520 CSN6A NdhN AT5G58330 AT5G59690 HTA6 HTB4 TUB3 AT5G65360 ATLFNR1 GAMMA MSP-1 ATDDM1 PSBA PSBK PSBI ATPH PSBD PSBC YCF3 NDHJ NDHC YCF4 PETA PSBL PETG RPS18 PSBB PSBH PETD YCF5 NDHI NDHA
GO:0006629
lipid metabolic process		BP6.897e-50AT1G01080 CYP86A4 ATGPAT4 AT1G02150 POR AT1G04420 emb2394 ADS1 AT1G06360 EMB2784 ALB-1V ABC1 AVDE1 CJD1 AT1G09130 CRB Z-ISO ATFD1 CLPP6 AT1G11860 AT1G12230 AT1G12800 AT1G14270 AT1G14345 NDF1 FUG1 AT1G18660 LHCA2*1 AOAT1 AOR ATPEX7 AT1G29660 AT1G30690 FdC2 PRPL11 AT1G33811 EMB3003 GAPB AtBGAL5 AT1G49380 GDC1 ABA2 AtFAP3 ACP2 AtTLP18.3 CPN60B AT1G57770 AT1G60890 AT1G62780 AT1G64650 BDG1 AT1G65230 GDPDL1 ABA4 ATKCR1 PSRP3/1 EDA17 AT1G74070 emb2184 AtGH9B7 ATKS XERICO FLA7 ENR1 AGP9 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 SCPL8 AT2G24060 ATHO1 AT2G27680 PY AtFAD3 ATFC-II ATCB5-B PRPL28 EDA3 AT2G35410 AT2G37660 CAC3 AT2G42130 AT2G43030 BIO2 AT2G43560 AT2G44920 CPFTSY CYP86A8 CER8 PHR2 DEG2 EMB2768 ATF1 PDE326 ATLTL1 EMB3119 PTAC13 AT3G09860 AtLCY Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST PGK1 AT3G12930 AT3G13120 ESM1 AT3G14220 AT3G15520 ADS3 MFP1 NDF4 AT3G16370 AAE7 EMB1865 AT3G18940 CBB1 PKP-ALPHA AT3G23530 AT3G23700 HCF101 ERD2B LAG1 AT3G25660 AT3G25805 LTA2 ATPRX ORF02 CCB1 LTPG2 RPL9 PTAC16 ATNOA1 AT3G47650 AT3G48420 AT3G48460 ATG4 PSRP2 CP33 HCEF1 AT3G54210 ATTSC13 SBPASE UGP3 ACSF AT3G58140 AT3G59780 AT3G60750 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 TROL AT4G01310 GLB1 AT4G02530 EMB3129 ATPC1 APX4 ATPD ATSPS4F AT4G10300 FdC1 CYP97B3 AtCLA1 AT4G17560 LIL3:1 AT4G17740 ATSS4 CH-42 AT4G18970 ATRAB8D CER2 PGI AT4G24750 AT4G24820 ACP4 CHLM B1 NARA5 AT4G28080 PSB28 AT4G28780 emb2726 FAD6 PGR3 AtGLDP1 SEP1 MRL1 HCF244 LTO1 AT4G36390 MAP1D AtFBA2 AT4G39040 54CP FD-GOGAT KCS19 AtFAD8 ATEGY2 AT5G07020 HEMC FTRA2 PMDH2 AGP4 PAS2 PPD5 TUB6 DiT1 EMB3137 AT5G14910 BCCP2 AT5G16240 AT5G17670 PCB2 ATCPN21 HCF136 SQE5 ATSS1 ARRPS1 AT5G33370 CAC2 G6PD1 NDH18 CLPP4 AT5G45670 CHL AT5G45950 KAS1 LIL3:2 OVA2 CPI1 DYAD ATPGMP AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 LUT2 NdhN AtcPT4 HTB4 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ATNDPK2 AT5G66470 ABA1 ACCD NDHE
GO:0046148
pigment biosynthetic process		BP5.105e-49ATCPO-I POR ALB-1V ABC1 AVDE1 CRB AT1G11860 AT1G12800 NDF1 AT1G19960 AOR APT1 UGT78D1 PRPL11 GAPB AT1G49380 AtTLP18.3 CPN60B AT1G56050 AT1G57770 AT1G65230 HEMB1 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. emb2184 APT2 AT2G03310 ATSULA AtFBA1 AT2G21385 ER ATHO1 AT2G27680 ATFC-II EDA3 AT2G35410 AT2G37660 AT2G40400 HEME2 AT2G43030 AT2G44920 PHR2 PDE326 AtLCY ATHST AT3G13120 PRPS20 ADS3 EMB1865 AT3G23700 HCF101 ATPRX ORF02 PTAC16 AT3G48420 GSA2 ATG4 HCEF1 ACSF AT3G59780 AT3G61870 CYP20-3 CSP41A TROL GLB1 AT4G02530 ATPC1 APX4 ATPD FdC1 AtCLA1 LIL3:1 CH-42 CHLM B1 AtFBA5 PORB emb2726 FAD6 AtGLDP1 SEP1 HCF244 AtFBA2 AT4G39040 FD-GOGAT AT5G07020 AT5G08050 HEMC PMDH2 ABAR PCB2 HCF136 ARRPS1 CHL OVA2 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G55220 GATA21 LUT2 NdhN GSA1 ABA1
GO:0019344
cysteine biosynthetic process		BP1.453e-48ATCPO-I POR ATCTL1 OE23 EMB2784 PSAO AT1G09310 AT1G11860 AT1G12230 AT1G12800 CP24 DRT112 AOAT1 PSAK PSAF ATROPGEF14 ACBP PRK AT1G32470 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 PSAH-2 AtTLP18.3 AGP21 AT1G55360 PSAG AT1G56190 AT1G60000 LHCA3 ACO2 PSBY ATHPR1 AT1G68260 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PSBR PDTPI AtFBA1 SCPL8 GDCH PnsL1 AT2G42220 EMB3119 ADK1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 CBB1 ATSAHH2 ATPRX GAMMA-TIP2 GSA2 ATG4 FTSZ2-2 AtPIP2;1 AT3G54400 SBPASE ACSF AT3G60750 CYP20-3 TROL AT4G01310 PSAD-1 ATPC1 LHCB5 AtCLA1 CER2 ACYB-2 PORB PSAE-1 AtGLDP1 KUP5 ATPRP4 AtFBA2 HEMC AtPPa6 PAS2 TUB6 GASA4 PCB2 ATCPN21 ATGSL1 APE2 TET1 GSA1 PSAN MSP-1
GO:0006534
cysteine metabolic process		BP7.236e-48ATCPO-I POR ATCTL1 OE23 EMB2784 PSAO AT1G09310 AT1G11860 AT1G12230 AT1G12800 CP24 DRT112 AOAT1 PSAK PSAF ATROPGEF14 ACBP PRK AT1G32470 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 PSAH-2 AtTLP18.3 AGP21 AT1G55360 PSAG AT1G56190 AT1G60000 LHCA3 ACO2 PSBY ATHPR1 AT1G68260 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PSBR PDTPI AtFBA1 SCPL8 GDCH PnsL1 AT2G42220 EMB3119 ADK1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 CBB1 ATSAHH2 ATPRX GAMMA-TIP2 GSA2 ATG4 FTSZ2-2 AtPIP2;1 AT3G54400 SBPASE ACSF AT3G60750 CYP20-3 TROL AT4G01310 PSAD-1 ATPC1 LHCB5 AtCLA1 CER2 ACYB-2 PORB PSAE-1 AtGLDP1 KUP5 ATPRP4 AtFBA2 HEMC AtPPa6 PAS2 TUB6 GASA4 PCB2 ATCPN21 ATGSL1 APE2 TET1 GSA1 PSAN MSP-1
GO:0042440
pigment metabolic process		BP3.236e-47ATCPO-I POR ALB-1V ABC1 AVDE1 CRB AT1G11860 AT1G12800 NDF1 ATCLH1 AT1G19960 AOR APT1 UGT78D1 PRPL11 GAPB AT1G49380 AtTLP18.3 CPN60B AT1G56050 AT1G57770 AT1G65230 HEMB1 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. emb2184 APT2 ARR14 AHK4 AT2G03310 ATSULA AtFBA1 AT2G21385 ER ATHO1 AT2G27680 ATFC-II ATCOP1 EDA3 AT2G35410 AT2G37660 AT2G40400 HEME2 AT2G43030 AT2G44920 PHR2 PDE326 AtLCY ATHST AT3G13120 PRPS20 ADS3 EMB1865 AT3G23700 HCF101 ATPRX ORF02 PTAC16 AT3G48420 GSA2 ATG4 HCEF1 ACSF AT3G59780 AT3G61870 CYP20-3 CSP41A TROL GLB1 AT4G02530 ATPC1 APX4 ATPD NYC1 FdC1 AtCLA1 LIL3:1 CH-42 CHLM B1 AtFBA5 PORB emb2726 FAD6 AtGLDP1 SEP1 HCF244 AtFBA2 AT4G39040 FD-GOGAT AT5G05200 AT5G07020 AT5G08050 HEMC PMDH2 ABAR PCB2 HCF136 ARRPS1 CHL OVA2 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G55220 GATA21 LUT2 NdhN GSA1 ABA1"
GO:0006354
DNA-templated transcription, elongation		BP5.165e-47emb2394 ATSCO1 SCY1 PTAC13 RPL15 EMB3126 AT4G11175 EMB3136 EMB3137 AT5G35170 AT5G65220 PSBA MATK RPS16 RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBE ORF31 PETG PSAJ RPL33 RPS18 RPL20 CLPP1 PSBB PSBT PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 RPL32 YCF5 NDHD PSAC NDHE NDHG NDHI NDHA RPS15
GO:0009070
serine family amino acid biosynthetic pr...		BP1.596e-46ATCPO-I POR ATCTL1 OE23 EMB2784 PSAO AT1G09310 AT1G11860 AT1G12230 AT1G12800 CP24 DRT112 AOAT1 PSAK PSAF ATROPGEF14 ACBP PRK AT1G32470 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 PSAH-2 AtTLP18.3 AGP21 AT1G55360 PSAG AT1G56190 AT1G60000 LHCA3 ACO2 PSBY ATHPR1 AT1G68260 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PSBR PDTPI AtFBA1 SCPL8 GDCH PnsL1 AT2G42220 EMB3119 ADK1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 CBB1 ATSAHH2 ATPRX GAMMA-TIP2 GSA2 ATG4 FTSZ2-2 AtPIP2;1 AT3G54400 SBPASE ACSF AT3G60750 CYP20-3 TROL AT4G01310 PSAD-1 ATPC1 LHCB5 AtCLA1 CER2 ACYB-2 PORB PSAE-1 AtGLDP1 KUP5 ATPRP4 AtFBA2 HEMC AtPPa6 PAS2 TUB6 GASA4 PCB2 ATCPN21 ATGSL1 APE2 TET1 GSA1 PSAN MSP-1
GO:0008652
cellular amino acid biosynthetic process		BP2.061e-45ATCPO-I POR ATCTL1 OE23 EMB2784 PSAO AVDE1 AT1G09310 ATATP-PRT2 MORF9 CLPP6 AT1G11860 AT1G12230 AT1G12800 CP24 DRT112 AOAT1 AOR PSAK ATIMD3 PSAF ATROPGEF14 ACBP PRK AT1G32470 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 AT1G51110 PSAH-2 ABA2 AtTLP18.3 AGP21 AT1G55360 PSAG AT1G56190 AT1G60000 LHCA3 ACO2 PSBY ATHPR1 AT1G68260 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PSBR ATIMD2 WIN1 ABH1 AT2G17033 PDTPI AtFBA1 SCPL8 AT2G24060 AT2G27680 GDCH PnsL1 ATKT2 AT2G42220 AT2G43090 EMB3119 ADK1 OMR1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 CBB1 ATSAHH2 AT3G23940 LTA2 ATPRX GAMMA-TIP2 AHAS GSA2 ATG4 FTSZ2-2 AtPIP2;1 AT3G53580 AT3G54400 ATDFD SBPASE ACSF AT3G58610 AT3G60750 CYP20-3 AtcpRRF EMB3126 TROL AT4G01310 GLB1 PSAD-1 ATPC1 LHCB5 AtCLA1 AK-HSDH CER2 ATRBP31 AT4G24830 ACYB-2 AT4G26370 PORB PSAE-1 FAD6 AtGLDP1 KUP5 AT4G36390 ATPRP4 AtFBA2 AT4G39040 HEMC AtPPa6 PMDH2 PAS2 AT5G10920 TUB6 AK ATIMD1 GASA4 ATCIMS PCB2 ATCPN21 AT5G22340 ATGSL1 AT5G36160 APE2 AT5G46580 TET1 AT5G51110 AT5G52960 GSA1 PSAN MSP-1 NDHE