4.0:Analysis result:Information of module

    Top 100 most enriched GO terms

GOID/Term	Ontology	p-value	Genes
GO:0015979 photosynthesis	BP	1.122e-52	PSAD-2 PSB27 OE23 PSAO CRB GAPA-2 PnsL2 CP24 NDF1 HCF173 NDF6 LHCA2*1 AT1G19740 ATLFNR2 AT1G29700 AB180 AB165 AB140 PSAK PSAF PRK GAPB AtcFBP Lhca5 FTSH1 AT1G52220 PSAH-2 AT1G54500 AtTLP18.3 PSAG AT1G56500 ATFD2 LHCA3 RPOD1 AT1G65230 AT1G67700 CSK ATHPR1 STN7 CRR23 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G75460 AT1G76450 AT1G76570 AT1G77090 TAPX PSBR APG2 CRR3 AT2G04039 LHCB2 LHCB2 PGR5 PSBX PSAE-2 ATGLK1 AT2G21530 AT2G26500 ALB3 AT2G29360 PSBW LHB1B2 LHB1B1 PnsL1 RCA ATFER4 AT2G42220 AT2G43560 AT2G44920 PSAP ATCYP38 ATBCA1 LHCB4.2 HCF243 ADS3 NDF4 HCF107 DAC PSBTN AT3G23700 AtCHUP1 GAPA LHCB2 DEG1 PTAC16 AT3G47070 CAB4 AT3G48420 SIG3 LHCA1 PPL1 SBPASE PPD6 LHCA2 CP12 CSP41A AGY1 PETC ATPC1 PSBQ APX4 LHCB5 PSAL PGR5-LIKE CHLM PORB PPH1 PSAE-1 HCF244 SHM1 LHCB4.1 ATFER1 AT5G03880 FD-GOGAT AT5G08050 FTRA2 PMDH2 ABAR BETA ENH1 ADG2 AT5G19940 ATGER3 ATHMA8 ATSIG5 AT5G35170 G6PD1 AT5G38520 APE1 ATGLK2 AT5G44520 APE2 AT5G48790 ATFRO7 CRR1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. LHCB3 ABI2 NdhN AT5G59250 PSAN ATLFNR1 MSP-1 RBCL RPL32
GO:0008152 metabolic process	BP	1.913e-51	AT1G01240 AT1G01260 PIP1;3 AT1G02300 FBI1 AtD27 MCCA PSAD-2 A single copy gene that encodes a protein with sequence similarity to tomato E8 (ACC oxidase, the last step in ethylene biosynthesis) involved in ethylene synthesis and fruit ripening in tomato. This gene is not induced by ethylene in siliques. The transcript is found in siliques, etiolated seedlings, leaves, stems and flowers. AT1G03520 AT1G03590 PSB27 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT-PHH1 ATKAO1 HDG2 BT3 AT1G05805 ARI5 ATNTH2 BBX24 ATMYB13 FTSH8 ACD31.2 HPD AT1G06645 OE23 ATF2KP MAPKKK13 UGT71C4 AT1G07280 ATSMO1 PSAO AVDE1 ACHT4 THA1 ATPPCK1 AtMYB60 AMI1 CRB FHY2 ATBCAT-1 ATBCAT-2 ATMPK1 ATGSTU18 AT1G10585 AMSH2 AT1G10610 AT1G10640 GWD ATCXXS1 ATBETAFRUCT4 ATCCS PEPKR2 AT1G12730 ATUGE1 ICE2 GAPA-2 AT1G13350 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. WRKY4 PnsL2 PKS2 SBH2 RHA2A GLYI4 CP24 AT1G15970 NDF1 ABA3 HCF173 AT1G16840 AT1G16960 AT1G18270 EPR1 AtMYB47 NDF6 AT1G19000 LHCA2*1 ATRL5 AT1G19660 ATCLH1 AT1G19680 BEL10 AT1G19740 ATLFNR2 AtCOR47 ASG5 HMG HMGB3 AT1G20810 AT1G21010 AT1G21060 AT1G21400 AT1G21540 AT1G21590 AT1G21670 AT1G21680 BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B. UREF AT1G22430 AT1G22630 ATMYB3 ATRABG3B FB AOAT1 MENG BBX15 AT1G26580 AT1G26665 AHK3 SPL11 SPL10 AT1G27520 CYCT1;3 AT1G28310 ATVOZ1 AML5 AT1G29700 AT1G29720 AB180 AB165 AB140 PSAK AAE14 ATSRX PSAF AtTRM9 ACBP AT1G31920 PRK AT1G32160 LOL1 ATMYC2 AT1G33050 AT1G33110 AT1G33270 AT1G33700 AT1G33811 AT5P1 AT1G35420 GAPB AtcFBP ATCAO Lhca5 DYW1 AT1G48100 AT1G49010 BBX17 AT1G49210 AT1G49500 ABF1 AT1G49730 FTSH1 NTMC2T5.1 ATERF3 AT1G51110 ABCG12 LYK3 AT1G52220 PSAH-2 ANAC019 AT1G53400 ATMPK18 MAP3KA ATMSRB1 AT1G53780 GLIP5 ESP ALDH7B4 AT-RSH3 ABCD2 AT1G54500 AtTLP18.3 AT1G54820 AT1G55000 BCDH PSAG UKL3 AT1G55960 AT1G56210 ATDI19 AT1G56300 AT1G56500 AT1G56720 AT1G57770 CAT2 MSL3 AtHEMA1 RXW8 AT1G60010 AT1G60590 AtNIK3 ATFD2 LHCA3 ATG8C AT1G62250 AT1G62310 HT1 AT1G62660 UGE3 ATSPPL2 UBC5 UBC28 AT1G64370 AT1G64500 AT1G64680 TUA1 RPOD1 AT1G65190 AT1G65230 ATHEX1 AtMYB20 BGLU21 AT1G66330 AT1G66540 AT1G66760 GDPDL2 ABA4 AT1G67700 CSK AT1G67870 ATHPR1 ATTPS6 ADO3 BBX27 BBX14 AT1G68660 STN7 ACR4 ANAC029 ATCYCD1;1 ATTPS8 AOAT2 ABCB26 JAZ9 CRR23 AT1G70820 AT1G71020 ATMYBL2 AtGDPD4 AT1G71480 AT1G71500 AT1G71710 AT1G72030 PATL1 TRFL6 AT1G73655 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. AT1G73750 BBX16 AT1G73920 AT1G73980 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATCPK30 AT1G74910 JAZ2 ATRL6 ATBBD1 BLH3 AT1G75460 encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. GASA1 ATCLV1 AT1G76110 AT1G76450 AtHMGR1 AT1G76570 AT1G76580 AT1G76720 ATSKP2;2 AGL27 AT1G77090 AT1G77280 TAPX GNR1 AT1G77930 RAP2.4 AT1G78140 BBX22 AT1G78995 PSBR ECT8 ALDH5F1 AT1G79600 WRI4 AtLa2 encodes a glycerate kinase which catalyzes the last step of photorespiration C2 cycle. ATXRCC1 AT1G80780 AtJ8 APG2 At17.1 AT2G01460 CRR3 ATBPC1 AT2G02570 PLP PKS1 AT2G03310 WRKY3 AT2G03390 ACR5 AT2G04039 XERICO AT2G04690 AT2G04700 LHCB2 LHCB2 PGR5 AT2G06025 PSBX AGT ALDH6B2 AT2G14910 AT2G15020 AtRLP19 AT2G16365 ATSERAT3;1 AT2G17650 AT2G17880 ATMPK7 AtTLP2 HBI1 ATTPS11 ADO2 ABX45 AT2G19650 MIOX2 AtOZF1 PSAE-2 ATGLK1 AT2G21130 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AT2G21530 ATGRP7 ATCAD3 AT2G21960 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. ATUBP4 AtRIBA2 AGL22 SDG23 SQE2 SCPL13 SCPL8 AT2G24280 AHA5 ATGPX1 EBF1 ATCTH AtGLDP2 AT2G26500 PLA AT2G26800 CIPK3 AT2G27290 AT2G27500 ALB3 AT2G28810 CYP707A2 AT2G29170 AT2G29290 AT2G29300 AT2G29310 AT2G29320 AT2G29360 AT103-1A PY ANTR1 MAPKKK14 ETC2 TCL2 PSBW AT2G31010 AT2G31040 ATERF15 GLX2-5 BBX25 ATGPX2 AT2G31800 AT2G31810 CVL1 AT2G32090 ATOFP16 AT2G32150 BAM6 ATKAO2 ACK2 BGLU33 AtCLO3 ATCPL3 atnudt22 AT2G34060 AT2G34140 AT2G34310 LHB1B2 LHB1B1 AT2G35050 AT2G35260 CTF2A AT2G36220 BE3 AT2G36630 AT2G37130 UMAMIT13 AT2G37585 FHY1 AT2G37840 CAC3 ATLMCO4 AtAUX1 PDX1L4 ATPDX1.1 AT2G38240 AT2G38300 AT2G38800 AT2G39000 SNZ ATMTP11 PnsL1 ACR9 DVL11 RCA ATP5CS AT2G40260 ATFER4 Encodes a putative amino acid transporter. AT2G40620 AT2G40860 AT2G41040 AT2G41060 ACA4 AT2G41705 AtSPL9 AT2G42220 FBH4 COR15 TTL3 ATPPC2 MAX2 HLH1 AtPIF4 AT2G43280 ETFQO AT2G43540 AT2G43560 AT2G43760 ATSAGT1 ATHOL2 AT2G44730 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHAM1 ATATG8E AFO CYP76C1 AGL20 ATHH2 ATI1 ATMPK12 ATBAG6 AT2G46250 ARF11 APRR9 AT2G46810 PSAP AtGolS1 UPB1 AT2G47890 AT3G01060 AT3G01310 ATCYP38 AT3G01490 ATBCA1 AT3G01520 ATPPT2 AT3G01690 RAD23-3 ATF1 AT3G03870 AT3G03990 AT3G04000 ATNEK2 ATWNK1 ATGID1A AIF1 RCI2A AT3G06440 ATPDHK A/N-InvC ATSFR2 MAP3KE2 ATPLC2 ATPK1 LHCB4.2 ATRAB8E PIP5K9 AT3G10020 AT3G10060 AtLCY PAL4 CPY ARAF DREB2 FAD2 AT3G12320 AT3G12710 AT3G13000 AT3G13040 SRF4 BGAL1 AtGRF5 GOX2 GOX1 ATNCED3 AT3G14595 CYP72A13 CYP72A15 HEME1 HCF243 ATMT3 SPA3 ATHM4 ANAC055 AT3G15570 UVR3 AT3G15780 ROD1 PIFI ADS3 MFP1 AT3G16220 NDF4 ATEBP ARR1 HCF107 ATCRSH CIPK1 JAI3 DAC AT3G18500 AT3G19030 ABF4 ATPEN2 AT3G19480 PUT5 AT3G19850 bHLH121 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. JMJ30 PSBTN ABCG15 AT3G21360 CYCP2;1 BBX31 ATWNK2 AT3G22440 XBAT35 AT3G23480 AT3G23700 AT3G24715 AtCHUP1 AT3G26085 CYP71B20 CYP71B3 AT3G26240 CYP71B4 CYP71B26 CYP71B35 AT3G26580 GAPA DRB3 AT3G27110 LHCB2 DEG1 AT3G28220 CYP81D11 AT3G29410 AFP3 AT-POX AT3G43220 ACD1 ATIVD JK224 AT3G45900 ATMYB48 AT3G46370 LUX PTAC16 ATPHS2 AT3G47070 ASN1 PEX11B CAB4 CDF3 AT3G47800 AT3G48200 CYP71A24 CEP3 ATBT2 AT3G48420 ATHAP5A AT3G48900 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. ARLA1C SNRK2-2 AT3G50560 AtIDD2 BEH1 AT3G51370 ATSSL4 AT3G51510 AT3G51730 ACX4 ATOFP18 AT3G52740 BGAL2 AFC1 SIG3 ATPTR1 LHCA1 PPL1 P5CS2 ATDFD AT3G55710 SBPASE ATJRG21 AT3G56300 PPD6 AT3G57020 ARR9 AT3G57170 ATVLN3 AT3G57470 AtSIP2 AT3G57680 AT3G57800 AT3G58020 AtSPP1 AT3G58640 AT3G59350 AT3G59780 AT3G60290 AT3G60340 HAT3 GATA4 (AT)VAP ATHAM2 AT3G61010 AtPP2-A13 AT3G61080 AT3G61160 AT3G61210 ATPIP1 LHCA2 AT3G61490 AtSLD1 ATHB-12 AT3G62190 AT3G62220 ARFA1E CP12 AT3G62650 BGLU8 AtTIR1 CSP41A OEP6 AT3G63240 UNE10 AHDP AT4G01130 AT4G01330 AT4G01460 AGY1 GATL6 UBQ14 AT4G03250 PETC ATRMA1 AtRbcX1 AT4G04340 AtWRKY42 ATPC1 ABC1 ATMSRB6 ATKEA3 AT4G05070 AT4G05090 AT4G05150 PSBQ UBI10 ATCRY1 APX4 CRRJ AT4G09500 LHCB5 RHA1B AT4G11570 ATGPX6 PLDGAMMA2 PLDGAMMA3 AT4G11900 CYP706A5 CYP706A6 PSAL AT4G12830 scpl20 MHK AT4G13040 NYC1 AT4G13550 J20 AT4G14480 AT4G15260 CYP74B2 AT4G15545 AtCLA1 AT4G15610 AT4G16190 FCA ATG8F encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AtBAM3 AT4G17150 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17810 ATWRKY28 ATSS4 AT4G18740 AT4G18810 CCD4 ATPP2-A1 AT4G19860 ATPCAP1 ATM4 AT4G21650 DER2.1 APG8A ORP2A PGR5-LIKE ATNYE1 AGL19 AT4G23050 CRK21 PIP1;5 AT4G23730 AT4G23820 CRR31 NLP7 ATTRE1 AT4G24050 AT4G24480 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) CHLM ATCBF2 ATCBF3 ACD1-LIKE ATCNFU3 PSD3 ABI1 BGAL12 CGA1 AtFBA7 AtFBA5 AT4G26555 AT4G26860 BBX28 PORB AT4G27450 AT4G27700 PPH1 BGLU9 CRF4 AT4G28080 AtPHR1 PSAE-1 ckl4 AtC3H49 AtVPS15 AT4G29990 MERI-5 AT4G30690 AT4G30790 AT4G31050 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. AT4G31860 AT4G32340 ATSDX1 GAMMA-VPE ATH1 ATCBL10 AtGLDP1 AT4G33080 LKR FAB1A ATHDA14 ABF3 KCS16 CLB6 AT4G34920 AT4G34950 AtMYB32 HCF244 AT4G35270 AT4G35810 atbzip14 J11 AT4G36190 AT4G36210 UBC17 AT4G36530 BEE2 AtPLT6 AtGBF1 ATMES9 CYP81D4 KAI2 AT4G37550 AT4G37560 COP3 BT5 NDH-M SHM1 ATCAD8 STY46 AT4G38650 AT4G38690 RD19 SHL1 AT4G39270 FKBP16-2 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT4G39970 AT5G01020 AT5G01260 AIRP2 LHCB4.1 ATFER1 AT5G01750 ATCIPK14 AT5G02160 CDL1 APRR7 LCL1 UPL4 AT5G02940 CPUORF47 UBQ3 AT5G03880 FD-GOGAT ATSYTC ATLDA AT5G05200 DREB2 AT5G05600 CBB3 AT5G05890 WCRKC1 HAT14 ATPGIP2 AT5G08050 TCP17 FTRA2 AT5G08415 AT5G08430 NDC1 PMDH2 14-3-3lambda CYP81K2 AT5G10650 CBSX3 CIPK5 KNAT4 AT5G11410 AT5G11840 AT-HSP17.6A AT5G12270 ANAC083 ABAR ATPDAT CCS52B CARAB-AK-LYS ROXY2 AT5G14120 MPL1 AT5G14210 AT5G14410 AT5G14720 BETA FDH AT5G14920 AT5G14970 GASA4 ATMIXTA AT5G16240 ATF2 AtMYB43 AT5G16650 AT5G16940 ENH1 RVE1 AT5G17670 AT5G18140 AT5G18525 AT5G18600 AT5G18640 AtTLP11 NSH3 MPK16 ATIPT5 AT5G19120 ADG2 ACL5 AtRbcX2 AT5G19940 CHR42 WAV2 ATGER3 AKINBETA1 ATHMA8 AT5G22050 A/N-InvE AT5G22850 AT5G22860 ATSIG5 AT5G24155 PGL5 APRR5 AT5G24490 ATTTG1 ATBZIP9 ATCOL4 EBF2 AT5G25770 BGLU37 AtTGG1 AT5G26622 ATGID1C AT5G27730 AT5G27920 AT5G27950 GME AT5G35170 G6PD1 AT5G35970 PP2C74 CAT3 RBCS2B AT5G38510 AT5G38520 APE1 AT5G39590 AT5G40060 AtRLP54 AT5G40450 AT5G40500 ATCLC-A BEL1 ATUBC8 AT5G42250 encodes a protein whose sequence is similar to ACC oxidase TZP ATAUX2-11 NDH18 AT5G44020 ATGLK2 AT5G44260 AT5G44410 AT5G44520 AT5G44530 AT5G45650 ATFKBP13 CIPK20 APE2 LON2 AT5G47330 AMK2 HINT3 AT5G48790 ATBXL1 ATFRO6 ATFRO7 ATFRO8 CAA33 At-NEET Encodes a putative sorbitol dehydrogenase that can be thiolated in vitro. CRR1 EFO1 AT5G52660 UBC10 CLPX AT5G53360 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO PORA LHCB3 BBX29 PDC2 BAM4 ATCBL2 AT5G56850 GATA21 BGAL4 AT5G57040 ABI2 ACA8 ORP4C AHA3 ADO1 AT5G57565 CIPK21 AT5G57655 ATCOL5 XBAT32 AT5G57785 APO2 NdhN AT5G58280 WNK4 AT5G58800 ftsh9 AT5G58950 AT5G59250 ATMYB59 APRR3 ATPDX2 OBP4 ATMYB34 PIF7 APRR1 EMB2728 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AT5G62350 CDF1 AT5G62900 AT5G63080 BT1 CYP94B1 NF-YC4 AT5G63620 SHA1 BGAL6 AtBGAL10 PSAN AT5G64110 AtMC3 AT5G64250 AT5G64380 AT5G64500 ATBXL4 AGL31 AGL70 XTH6 AT5G65840 ACR1 STR16 ATLFNR1 MSP-1 ATHB53 ABA1 DEAR2 ASL39 ATBT4 RBCL RPL32
GO:1901700 response to oxygen-containing compound	BP	9.849e-50	AT1G01260 PIP1;3 FBI1 MCCA AT-PHH1 ATGLR3.4 AT1G05340 BT3 BBX24 ATMYB13 OE23 THA1 AtMYB60 CRB ATBCAT-2 ATMPK1 GWD AT1G11210 ATBETAFRUCT4 ATCCS RHA2A GLYI4 ABA3 TRM3 AtMYB47 LHCA2*1 ATCLH1 ATLFNR2 AtCOR47 ASG5 AT1G21400 ATMYB3 FB AOAT1 AHK3 DRM1 COR413-TM1 AB165 PRK LOL1 ATMYC2 OHP2 ATGLR3.3 GAPB AtcFBP AT1G49010 ABF1 ATERF3 ABCG12 ANAC019 ESP ALDH7B4 AT1G56220 ATDI19 MSL3 AtHEMA1 AT1G60010 ATFD2 AT1G62660 RPOD1 AT1G66760 ATHPR1 BBX14 AT-EXP1 ABCB26 AtCLO4 JAZ9 AT1G70820 ATMYBL2 AT1G73480 AT1G73980 ATCPK30 JAZ2 AT1G75460 encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. GASA1 AT1G76110 ATL8 RAP2.4 AUF1 BBX22 PSBR ATNRP1 XERICO PGR5 AGT AtRLP19 ATCOR413-PM1 AT2G17650 AT2G17880 HIS1-3 ATMPK7 ABX45 ATGLK1 AT2G21130 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATGRP7 AGL22 AtGRF1 AT2G23840 ELF3 AR781 PLA CIPK3 AT2G27140 AT2G27500 ATOEP16-1 AT103-1A ANTR1 MAPKKK14 ATERF15 BBX25 AT2G32090 AtCLO3 ATCPL3 AT2G36220 PIP2;2 AT2G37950 ACR9 RCA ATP5CS ATHSPRO2 ATFER4 Encodes a putative amino acid transporter. COR15B COR15 TTL3 MAX2 AtPIF4 ATSAGT1 AFO AGL20 ATHH2 ATMPK12 ATBAG6 PSAP AtGolS1 ATCYP38 ATBCA1 ATGID1A AT3G05640 AIF1 RCI2A AT3G07310 LHCB4.2 AT3G10060 DREB2 AT3G11110 AT3G12320 DIN4 AtGRF5 ATNCED3 ATMT3 AT3G15450 ANAC055 AT3G15630 TCTP ATEBP CIPK1 JAI3 AT3G18050 ABF4 BBX31 GAPA LHCB2 AFP3 AT-POX ATIVD JK224 ATMYB48 ATPHS2 ASN1 ATBT2 ARLA1C SNRK2-2 AtIDD2 AT3G52480 AT3G52740 LHCA1 P5CS2 SBPASE AT3G57020 ARR9 AtSPP1 ATPIRIN1 AT3G59350 AT3G60690 AtPP2-A13 ATPIP1 ATHB-12 CP12 AT4G01330 PETC DFL2 AtRbcX1 ABC1 UBI10 ATCRY1 LHCB5 RHA1B ACD6 AT4G15545 AT4G15610 DELTA-TIP2 ATPP2-A1 ATPCAP1 ATM4 IQD22 PIP1;5 NLP7 ATCBF3 ABI1 CGA1 AT4G27450 AT4G28080 AT4G29110 AtVPS15 MERI-5 AT4G31860 AT4G32440 LKR EX1 ABF3 ADF9 AtMYB32 ATSEN1 UBC17 BEE2 AT4G37220 KAI2 BT5 RD19 LHCB4.1 ATFER1 CDL1 LCL1 FD-GOGAT DREB2 AT5G05600 ABCG22 ATPGIP2 PMDH2 14-3-3lambda AT-HSP17.6A ANAC083 AT5G14120 BETA AT5G14920 GASA4 ATMIXTA AtCor6.6 AtMYB43 RVE1 NSH3 AT5G19970 DIN10 AKINBETA1 ATBZIP9 ATCOL4 BGLU37 AtTGG1 ATGID1C BHLH136 AtRLP54 ATCLC-A BEL1 ATGLK2 LCR77 CIPK20 ATDOG1 DIR1 CAA33 EFO1 AT5G52660 PYL8 AtHGO AT5G55620 ATCBL2 GATA21 ABI2 AT5G57340 ATCOL5 AT5G57785 WNK4 LTP3 ATMYB59 ATMYB34 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. BT1 AT5G63190 CYP94B1 NF-YC4 SHA1 XTH6 ATLFNR1 ATDI8 MSP-1 ABA1 ATBT4 RBCL
GO:0044237 cellular metabolic process	BP	1.438e-49	AT1G01240 AT1G01260 PIP1;3 FBI1 AtD27 MCCA PSAD-2 AT1G03590 PSB27 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT-PHH1 ATKAO1 HDG2 BT3 AT1G05805 ARI5 ATNTH2 BBX24 ATMYB13 FTSH8 ACD31.2 HPD OE23 ATF2KP MAPKKK13 AT1G07280 ATSMO1 PSAO AVDE1 THA1 ATPPCK1 AtMYB60 AMI1 CRB FHY2 ATBCAT-1 ATBCAT-2 ATMPK1 ATGSTU18 AT1G10585 AMSH2 AT1G10610 GWD ATCXXS1 ATCCS PEPKR2 AT1G12730 ATUGE1 ICE2 GAPA-2 AT1G13350 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. WRKY4 PnsL2 PKS2 SBH2 RHA2A CP24 AT1G15970 NDF1 ABA3 HCF173 AT1G16840 AT1G16960 AT1G18270 EPR1 AtMYB47 NDF6 AT1G19000 LHCA2*1 ATRL5 AT1G19660 ATCLH1 AT1G19680 BEL10 AT1G19740 ATLFNR2 AtCOR47 ASG5 HMG AT1G20810 AT1G21010 AT1G21060 AT1G21590 AT1G21670 AT1G21680 BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B. UREF AT1G22630 ATMYB3 ATRABG3B FB AOAT1 MENG BBX15 AT1G26580 AT1G26665 AHK3 SPL11 SPL10 AT1G27520 CYCT1;3 AT1G28310 ATVOZ1 AML5 AT1G29700 AT1G29720 AB180 AB165 AB140 PSAK AAE14 PSAF AtTRM9 ACBP AT1G31920 PRK AT1G32160 LOL1 ATMYC2 AT1G33050 AT1G33110 AT1G33700 AT5P1 AT1G35420 GAPB AtcFBP ATCAO Lhca5 DYW1 AT1G49010 BBX17 AT1G49210 AT1G49500 ABF1 AT1G49730 FTSH1 NTMC2T5.1 ATERF3 AT1G51110 LYK3 AT1G52220 PSAH-2 ANAC019 AT1G53400 ATMPK18 MAP3KA ATMSRB1 AT1G53780 ESP ALDH7B4 AT-RSH3 ABCD2 AT1G54500 AtTLP18.3 AT1G54820 AT1G55000 PSAG UKL3 AT1G55960 AT1G56210 ATDI19 AT1G56300 AT1G56500 AT1G56720 AT1G57770 CAT2 MSL3 AtHEMA1 AT1G60010 AT1G60590 AtNIK3 ATFD2 LHCA3 ATG8C AT1G62250 AT1G62310 HT1 AT1G62660 UGE3 UBC5 UBC28 AT1G64500 AT1G64680 TUA1 RPOD1 AT1G65190 AT1G65230 AtMYB20 BGLU21 AT1G66330 AT1G66760 GDPDL2 ABA4 AT1G67700 CSK ATHPR1 ATTPS6 ADO3 BBX27 BBX14 STN7 ACR4 ANAC029 ATCYCD1;1 ATTPS8 AOAT2 ABCB26 JAZ9 CRR23 AT1G70820 AT1G71020 ATMYBL2 AtGDPD4 AT1G71480 AT1G71710 PATL1 TRFL6 AT1G73655 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. AT1G73750 BBX16 AT1G73920 AT1G73980 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATCPK30 JAZ2 ATRL6 ATBBD1 BLH3 AT1G75460 encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. GASA1 ATCLV1 AT1G76110 AT1G76450 AtHMGR1 AT1G76570 AT1G76580 AT1G76720 ATSKP2;2 AGL27 AT1G77090 AT1G77280 TAPX GNR1 AT1G77930 RAP2.4 BBX22 AT1G78995 PSBR ECT8 ALDH5F1 WRI4 AtLa2 encodes a glycerate kinase which catalyzes the last step of photorespiration C2 cycle. ATXRCC1 AT1G80780 AtJ8 APG2 At17.1 AT2G01460 CRR3 ATBPC1 AT2G02570 PLP PKS1 WRKY3 AT2G03390 AT2G04039 XERICO AT2G04690 AT2G04700 LHCB2 LHCB2 PGR5 PSBX AGT ALDH6B2 AT2G14910 AT2G15020 AtRLP19 AT2G16365 ATSERAT3;1 AT2G17650 AT2G17880 ATMPK7 AtTLP2 HBI1 ATTPS11 ADO2 ABX45 MIOX2 AtOZF1 PSAE-2 ATGLK1 AT2G21130 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AT2G21530 ATGRP7 ATCAD3 AT2G21960 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. ATUBP4 AtRIBA2 AGL22 SDG23 SQE2 SCPL8 AT2G24280 AHA5 ATGPX1 EBF1 ATCTH AtGLDP2 AT2G26500 PLA AT2G26800 CIPK3 AT2G27290 ALB3 AT2G28810 CYP707A2 AT2G29300 AT2G29360 AT103-1A PY ANTR1 MAPKKK14 ETC2 TCL2 PSBW AT2G31010 AT2G31040 ATERF15 GLX2-5 BBX25 ATGPX2 AT2G31800 AT2G31810 CVL1 AT2G32090 ATOFP16 BAM6 ATKAO2 ACK2 AtCLO3 ATCPL3 atnudt22 AT2G34140 AT2G34310 LHB1B2 LHB1B1 AT2G35050 AT2G35260 AT2G36220 BE3 AT2G36630 UMAMIT13 FHY1 AT2G37840 CAC3 ATLMCO4 PDX1L4 ATPDX1.1 AT2G38240 AT2G38300 AT2G38800 SNZ ATMTP11 PnsL1 DVL11 RCA ATP5CS AT2G40260 ATFER4 Encodes a putative amino acid transporter. AT2G40620 AT2G40860 AT2G41060 ACA4 AT2G41705 AtSPL9 AT2G42220 FBH4 COR15 TTL3 ATPPC2 MAX2 HLH1 AtPIF4 AT2G43280 ETFQO AT2G43540 AT2G43560 AT2G43760 ATSAGT1 AT2G44730 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHAM1 ATATG8E AGL20 ATHH2 ATI1 ATMPK12 ATBAG6 AT2G46250 ARF11 APRR9 AT2G46810 PSAP UPB1 AT2G47890 AT3G01060 ATCYP38 AT3G01490 ATBCA1 AT3G01520 AT3G01690 RAD23-3 ATF1 AT3G03870 AT3G03990 AT3G04000 ATNEK2 ATWNK1 AIF1 RCI2A AT3G06440 ATPDHK A/N-InvC ATSFR2 MAP3KE2 ATPK1 LHCB4.2 ATRAB8E PIP5K9 AT3G10020 AT3G10060 AtLCY PAL4 ARAF DREB2 AT3G12320 AT3G12710 AT3G13000 AT3G13040 SRF4 BGAL1 AtGRF5 GOX2 GOX1 ATNCED3 AT3G14595 HEME1 HCF243 SPA3 ATHM4 ANAC055 AT3G15570 UVR3 AT3G15780 ROD1 PIFI ADS3 MFP1 AT3G16220 NDF4 ATEBP ARR1 HCF107 ATCRSH CIPK1 JAI3 DAC AT3G18500 AT3G19030 ABF4 ATPEN2 AT3G19480 PUT5 AT3G19850 bHLH121 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. JMJ30 PSBTN ABCG15 CYCP2;1 BBX31 ATWNK2 AT3G22440 XBAT35 AT3G23700 AT3G24715 AtCHUP1 AT3G26580 GAPA DRB3 LHCB2 DEG1 CYP81D11 AFP3 AT-POX AT3G43220 ACD1 ATIVD JK224 AT3G45900 ATMYB48 AT3G46370 LUX PTAC16 ATPHS2 AT3G47070 ASN1 PEX11B CAB4 CDF3 AT3G48200 ATBT2 AT3G48420 ATHAP5A AT3G48900 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. ARLA1C SNRK2-2 AtIDD2 BEH1 AT3G51370 ATSSL4 AT3G51510 AT3G51730 ACX4 ATOFP18 BGAL2 AFC1 SIG3 ATPTR1 LHCA1 PPL1 P5CS2 ATDFD SBPASE AT3G56300 PPD6 AT3G57020 ARR9 AT3G57170 ATVLN3 AT3G57680 AT3G57800 AT3G58020 AtSPP1 AT3G58640 AT3G59350 AT3G59780 AT3G60340 HAT3 GATA4 (AT)VAP ATHAM2 AtPP2-A13 AT3G61080 AT3G61160 ATPIP1 LHCA2 AtSLD1 ATHB-12 AT3G62190 AT3G62220 ARFA1E CP12 AT3G62650 AtTIR1 CSP41A OEP6 AT3G63240 UNE10 AHDP AT4G01330 AT4G01460 AGY1 UBQ14 AT4G03250 PETC ATRMA1 AtRbcX1 AT4G04340 AtWRKY42 ATPC1 ATKEA3 AT4G05070 AT4G05090 AT4G05150 PSBQ UBI10 ATCRY1 APX4 CRRJ LHCB5 RHA1B AT4G11570 ATGPX6 PLDGAMMA2 PLDGAMMA3 AT4G11900 PSAL AT4G12830 MHK AT4G13040 NYC1 J20 AT4G14480 AT4G15260 CYP74B2 AT4G15545 AtCLA1 AT4G15610 AT4G16190 FCA ATG8F encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AtBAM3 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17810 ATWRKY28 ATSS4 AT4G18740 AT4G18810 AT4G19860 ATPCAP1 ATM4 APG8A PGR5-LIKE ATNYE1 AGL19 AT4G23050 CRK21 PIP1;5 CRR31 NLP7 ATTRE1 AT4G24480 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) CHLM ATCBF2 ATCBF3 PSD3 ABI1 BGAL12 CGA1 AtFBA7 AtFBA5 AT4G26555 AT4G26860 BBX28 PORB AT4G27450 AT4G27700 PPH1 CRF4 AT4G28080 AtPHR1 PSAE-1 ckl4 AtC3H49 AtVPS15 AT4G29990 MERI-5 AT4G30690 AT4G30790 AT4G31050 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. AT4G31860 AT4G32340 ATSDX1 GAMMA-VPE ATH1 AtGLDP1 AT4G33080 LKR FAB1A ATHDA14 ABF3 KCS16 CLB6 AT4G34920 AT4G34950 AtMYB32 HCF244 AT4G35270 AT4G35810 atbzip14 J11 AT4G36210 UBC17 AT4G36530 BEE2 AtPLT6 AtGBF1 ATMES9 BT5 SHM1 ATCAD8 STY46 AT4G38690 RD19 SHL1 AT4G39270 FKBP16-2 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT4G39970 AT5G01020 AT5G01260 AIRP2 LHCB4.1 ATFER1 AT5G01750 ATCIPK14 AT5G02160 CDL1 APRR7 LCL1 UPL4 AT5G02940 UBQ3 AT5G03880 FD-GOGAT ATSYTC ATLDA AT5G05200 DREB2 AT5G05600 HAT14 ATPGIP2 AT5G08050 TCP17 FTRA2 AT5G08415 AT5G08430 NDC1 PMDH2 14-3-3lambda AT5G10650 CBSX3 CIPK5 KNAT4 AT5G11410 AT5G11840 AT-HSP17.6A ANAC083 ABAR CCS52B CARAB-AK-LYS ROXY2 AT5G14120 MPL1 AT5G14210 AT5G14410 AT5G14720 BETA AT5G14920 AT5G14970 GASA4 ATMIXTA AT5G16240 AtMYB43 AT5G16650 ENH1 RVE1 AT5G17670 AT5G18140 AT5G18525 AT5G18600 AtTLP11 NSH3 MPK16 ATIPT5 ADG2 AtRbcX2 AT5G19940 CHR42 ATGER3 AKINBETA1 ATHMA8 AT5G22050 A/N-InvE ATSIG5 PGL5 APRR5 AT5G24490 ATBZIP9 ATCOL4 EBF2 AT5G25770 BGLU37 AtTGG1 AT5G27730 AT5G27920 GME AT5G35170 G6PD1 AT5G35970 PP2C74 CAT3 AT5G38520 APE1 AT5G39590 AT5G40060 AtRLP54 AT5G40500 ATCLC-A BEL1 ATUBC8 TZP ATAUX2-11 NDH18 AT5G44020 ATGLK2 AT5G44260 AT5G44520 ATFKBP13 CIPK20 APE2 LON2 AT5G47330 AMK2 HINT3 AT5G48790 ATFRO7 ATFRO8 CAA33 At-NEET CRR1 AT5G52660 UBC10 CLPX AT5G53360 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO PORA LHCB3 BBX29 PDC2 BAM4 ATCBL2 AT5G56850 GATA21 BGAL4 ABI2 ACA8 AHA3 ADO1 AT5G57565 CIPK21 ATCOL5 XBAT32 APO2 NdhN AT5G58280 WNK4 AT5G58800 ftsh9 AT5G58950 AT5G59250 ATMYB59 APRR3 ATPDX2 OBP4 ATMYB34 PIF7 APRR1 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AT5G62350 CDF1 AT5G62900 AT5G63080 BT1 CYP94B1 NF-YC4 SHA1 BGAL6 PSAN AT5G64250 AT5G64380 AT5G64500 ATBXL4 AGL31 AGL70 XTH6 STR16 ATLFNR1 MSP-1 ATHB53 ABA1 DEAR2 ATBT4 RBCL RPL32
GO:0050896 response to stimulus	BP	2.049e-47	AT1G01260 PIP1;3 FBI1 MCCA ATATG18G AT-PHH1 ATGLR3.4 AT1G05340 BT3 ARI5 ATNTH2 BBX24 ATMYB13 ACD31.2 OE23 AVDE1 THA1 AtMYB60 CRB FHY2 ATBCAT-2 ATMPK1 ATGSTU18 GWD AT1G11210 ATSTP1 ATBETAFRUCT4 ATCCS ICE2 Encodes protein phosphatase 2A (PP2A) B'theta subunit. Targeted to peroxisomes. Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PKS2 SBH2 RHA2A GLYI4 CP24 AT1G15970 ABA3 EPR1 TRM3 AtMYB47 LHCA2*1 LCR78 AT1G19660 ATCLH1 ATLFNR2 AT1G20030 AtCOR47 AT1G20470 ASG5 HMG AT1G21400 AT1G21590 ATMYB3 ATRABG3B FB AT1G23130 AOAT1 AT1G25275 AT1G25480 KDR AHK3 ABCB14 DRM1 AtRLP4 ATVOZ1 COR413-TM1 AT1G29460 AB165 ATSRX ACBP PRK LOL1 ATMYC2 AT1G33050 AT1G33110 OHP2 ATGLR3.3 GAPB AtcFBP ATH5 AT1G49010 ABF1 ATERF3 ABCG12 AT1G52770 ANAC019 ATMPK18 ATMSRB1 ESP ALDH7B4 AtTLP18.3 AT1G56220 ATDI19 AT1G56500 CAT2 MSL3 AtHEMA1 AT1G60010 ATFD2 ATG8C AT1G62660 UBC28 AT1G64370 RPOD1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. BGLU21 AT1G66330 AT1G66760 GDPDL2 ABA4 CSK AT1G67865 AT1G67870 ATHPR1 ADO3 BBX14 ACR4 ANAC029 AT-EXP1 AIT1 AT1G70420 ABCB26 AtCLO4 JAZ9 AT1G70820 ATMYBL2 PATL1 TRFL6 AT1G73480 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. BBX16 AT1G73980 AtRLP14 ATCPK30 AT1G74910 JAZ2 JAC1 ATBBD1 AT1G75460 encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. AT1G75580 GASA1 AT1G75800 ATCLV1 AT1G76110 ATL8 AT1G76450 AtHMGR1 AT1G76570 ATSKP2;2 AGL27 AT1G77280 TAPX GNR1 RAP2.4 AUF1 BBX22 PSBR ECT8 ALDH5F1 AtLa2 ATXRCC1 AT1G80780 AtJ8 At17.1 ATBPC1 LCR69 PLP PKS1 AT2G03390 ATNRP1 XERICO LHCB2 PGR5 AGT ALDH6B2 AtRLP19 MEE14 ATCOR413-PM1 AT2G16365 AT2G16660 AT2G17650 AT2G17880 HIS1-3 ATMPK7 ATSYP112 AtTLP2 HBI1 ADO2 ABX45 AT2G19650 AtOZF1 AT2G20230 ATGLK1 AT2G21130 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATGRP7 AGL22 AtGRF1 AT2G23840 ATGPX1 EBF1 ELF3 PDF1.3 PDF1.2b AR781 PLA CIPK3 AT2G27140 AT2G27500 ATOEP16-1 CXIP4 CYP707A2 AT103-1A PY ANTR1 ABCG31 MAPKKK14 ATERF15 BBX25 ATGPX2 AT2G31800 AT2G32090 ATGLR3.5 AtCLO3 ATCPL3 AT2G34060 AT2G36220 AtGRF3 AT2G37030 AT2G37130 PIP2;2 FHY1 AT2G37950 AtAUX1 PDX1L4 ATPDX1.1 AT2G38240 AT2G38330 ATMTP11 ACR9 RCA ATP5CS AT2G39920 ATHSPRO2 ELF4 ATFER4 Encodes a putative amino acid transporter. AT2G41040 AT2G41060 ACA4 FBH4 COR15B COR15 TTL3 ATPPC2 MAX2 HLH1 AtPIF4 AT2G43280 ETFQO ATTI2 ATSAGT1 AT2G44920 ATATG8E AFO AGL20 ATHH2 ATMPK12 ATBAG6 ARF11 AT2G46690 ROPGAP3 APRR9 PSAP AtGolS1 AT2G47890 ATCYP38 ATBCA1 AT3G01520 RAD23-3 AT3G03990 AT3G04000 ATGID1A AT3G05640 AIF1 RCI2A AT3G05990 ATSFR2 AT3G07310 ATPLC2 ATPK1 LHCB4.2 ATRAB8E AT3G10020 AT3G10060 DREB2 AT3G11110 ANT1 AT3G11930 AT3G12320 AT3G12710 SRF4 DIN4 AtGRF5 GOX2 GOX1 ATNCED3 HEME1 ATMT3 ATHM4 AT3G15450 ANAC055 AT3G15570 UVR3 AT3G15630 AT3G15760 ADS3 AQP1 TCTP ATEBP ARR1 CIPK1 AT3G17640 JAI3 AT3G18050 AT3G19030 ABF4 ATPEN2 AT3G19850 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. ABCG15 ATSGP2 BBX31 AT3G22104 ATWNK2 AT3G23700 AT3G23910 ATB' AT3G26240 GAPA DRB3 LHCB2 CYP81D11 AT3G29410 AFP3 AT-POX AT3G44450 ACD1 ATIVD JK224 ATMYB48 AT3G46370 PTAC16 ATPHS2 AT3G47070 ASN1 CAB4 CHL ATBT2 AT3G48900 ARLA1C SNRK2-2 AtIDD2 AT3G51730 AT3G52360 AT3G52480 AT3G52740 SIG3 AT3G53990 LHCA1 ABCG19 P5CS2 SBPASE AT3G57020 ARR9 AtSIP2 AT3G57680 AtSPP1 ATPIRIN1 AT3G59350 AT3G59940 AT3G60290 AT3G60300 GATA4 AT3G60690 AtPP2-A13 ATPIP1 ATPOB1 ATHB-12 AT3G62190 ARFA1E CP12 AT3G62550 AtTIR1 CSP41A AHDP AT4G01330 AGY1 PETC DFL2 AtRbcX1 ABC1 UBI10 ATCRY1 APX4 LHCB5 RHA1B ATGPX6 PLDGAMMA2 AtRLP47 ACD6 CYP74B2 AT4G15545 AtCLA1 AT4G15610 ATVAMP724 AT4G16490 AT4G16670 AtBAM3 DELTA-TIP2 ATWRKY28 ATPUP10 ATSS4 ATPP2-A1 ATPCAP1 ATM4 APG8A ORP2A PGR5-LIKE AGL19 AT4G23050 IQD22 PIP1;5 CRR31 NLP7 ECIP1 ATCBF2 ATCBF3 ABI1 CGA1 AtFBA7 PORB AT4G27450 AT4G28080 AtPHR1 AT4G29110 AtVPS15 MERI-5 ENP AT4G31860 AT4G32440 ATSDX1 ATH1 ATCBL10 AtGLDP1 LKR EX1 AT4G33980 ABF3 KCS16 CLB6 AT4G34920 ADF9 AtMYB32 HCF244 ATSEN1 atbzip14 UBC17 BEE2 ATMES9 AT4G37220 KAI2 AT4G37560 COP3 BT5 SHM1 ATCAD8 AT4G38690 AT4G38840 AT4G38860 RD19 SHL1 AT4G39270 LHCB4.1 ATFER1 AT5G01750 ATCIPK14 CDL1 APRR7 LCL1 UBQ3 FD-GOGAT PKS4 DREB2 AT5G05600 CBB3 AT5G05800 ABCG22 ATPGIP2 AT5G08050 AT5G08430 NDC1 PMDH2 14-3-3lambda AT5G10650 CBSX3 CIPK5 KNAT4 ATVAMP713 AT-HSP17.6A ANAC083 CCS52B AT5G14120 MPL1 AT5G14210 BETA FDH AT5G14920 GASA4 ATMIXTA ATCNGC2 AtCor6.6 AtMYB43 ENH1 RVE1 SAUR20 AT5G18030 AT5G18130 NSH3 MPK16 AILP1 ADG2 ACL5 AT5G19970 DIN10 WAV2 ATGER3 AT5G20810 AKINBETA1 ATSIG5 APRR5 ATTTG1 ATBZIP9 ATCOL4 EBF2 BGLU37 AtTGG1 ATGID1C AT5G27950 G6PD1 THI2.2 RBCS2B BHLH136 AT5G40060 AtRLP54 AT5G40450 ATCLC-A BEL1 ATUBC8 COR27 ATAUX2-11 AT5G43740 NDH18 AT5G43870 ATGLK2 LCR77 TAO1 AT5G44580 SUV2 CIPK20 ATDOG1 APE2 LON2 atnudt8 DIR1 AT5G48620 ATFRO6 CAA33 CRR1 EFO1 AT5G52660 PYL8 AT5G53500 AT5G53900 AtHGO PORA BBX29 ATHTA1 PDC2 AT5G55620 ATCBL2 ATOXS3 GATA21 ABI2 ACA8 AT5G57340 ADO1 CIPK21 ATCOL5 XBAT32 AT5G57785 SKIP1 APO2 NdhN WNK4 AT5G59080 LTP3 ATMYB59 APRR3 ATMYB34 PIF7 APRR1 EMB2728 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. AT5G62350 BT1 AT5G63190 CYP94B1 NF-YC4 SHA1 AtBGAL10 AT5G64110 AT5G64250 ATOPT4 AT5G64460 CLEL ABCF5 AGL31 AGL70 XTH6 ATRLP57 ATLFNR1 ATDI8 MSP-1 ATHB53 ABA1 AT5G67385 ATBT4 RBCL
GO:0009628 response to abiotic stimulus	BP	2.304e-47	PIP1;3 FBI1 AT-PHH1 ATGLR3.4 BT3 ARI5 BBX24 ATMYB13 ACD31.2 OE23 AVDE1 AtMYB60 CRB FHY2 ATMPK1 GWD AT1G11210 ATBETAFRUCT4 ICE2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PKS2 SBH2 RHA2A CP24 ABA3 EPR1 AtMYB47 LHCA2*1 ATLFNR2 AtCOR47 HMG AT1G21400 ATMYB3 FB AOAT1 AT1G25275 KDR AHK3 ABCB14 ATVOZ1 COR413-TM1 AB165 ACBP PRK ATMYC2 OHP2 ATGLR3.3 GAPB AT1G49010 ATERF3 ABCG12 AT1G52770 ANAC019 ALDH7B4 AtTLP18.3 ATDI19 AT1G56500 CAT2 MSL3 AtHEMA1 AT1G60010 ATFD2 AT1G62660 RPOD1 BGLU21 ABA4 CSK ATHPR1 ADO3 AT-EXP1 AT1G70420 AtCLO4 AT1G70820 ATMYBL2 PATL1 TRFL6 AT1G73480 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. BBX16 ATCPK30 JAZ2 JAC1 GASA1 AT1G76450 AtHMGR1 AT1G76570 ATSKP2;2 AGL27 TAPX GNR1 RAP2.4 BBX22 PSBR ALDH5F1 AT1G80780 AtJ8 PKS1 ATNRP1 XERICO LHCB2 PGR5 AGT ATCOR413-PM1 AT2G16365 AT2G16660 HIS1-3 ATSYP112 ADO2 ABX45 AT2G21130 ATGRP7 AGL22 AT2G23840 ELF3 AR781 PLA AT2G27140 ATOEP16-1 CXIP4 CYP707A2 ANTR1 BBX25 ATGLR3.5 AtCLO3 ATCPL3 AT2G36220 PIP2;2 FHY1 AtAUX1 ATPDX1.1 RCA ATP5CS ATHSPRO2 ELF4 AT2G41040 ACA4 FBH4 COR15B COR15 TTL3 MAX2 HLH1 AtPIF4 AT2G43280 ETFQO AT2G44920 AGL20 ATHH2 ATBAG6 ROPGAP3 APRR9 AtGolS1 ATCYP38 ATBCA1 ATGID1A AT3G05640 RCI2A ATSFR2 ATPK1 LHCB4.2 AT3G10060 DREB2 AT3G12320 DIN4 ATNCED3 ATMT3 ANAC055 AT3G15570 UVR3 AT3G15760 ADS3 AQP1 TCTP ATEBP CIPK1 ABF4 AT3G19850 ABCG15 BBX31 AT3G22104 ATWNK2 AT3G23700 GAPA LHCB2 AT-POX AT3G44450 JK224 PTAC16 ATPHS2 AT3G47070 ASN1 CAB4 ATBT2 SNRK2-2 AT3G51730 AT3G52360 AT3G52740 SIG3 AT3G53990 LHCA1 P5CS2 SBPASE AT3G57020 AtSIP2 ATPIRIN1 AT3G60290 AT3G60300 GATA4 ATPIP1 ATPOB1 ATHB-12 AT3G62190 CP12 CSP41A AHDP AGY1 PETC DFL2 AtRbcX1 ABC1 ATCRY1 APX4 LHCB5 ATGPX6 AT4G15545 AtCLA1 ATVAMP724 AT4G16490 AtBAM3 DELTA-TIP2 ATSS4 ATPP2-A1 ATPCAP1 ATM4 APG8A PGR5-LIKE AGL19 PIP1;5 CRR31 NLP7 ECIP1 ATCBF2 ATCBF3 ABI1 CGA1 AtFBA7 AT4G27450 AtPHR1 AtVPS15 ENP AT4G31860 ATSDX1 ATH1 ATCBL10 LKR AT4G33980 ABF3 KCS16 AtMYB32 HCF244 ATSEN1 atbzip14 KAI2 COP3 BT5 SHM1 AT4G38840 RD19 SHL1 LHCB4.1 ATFER1 APRR7 LCL1 UBQ3 FD-GOGAT PKS4 DREB2 AT5G05600 CBB3 AT5G05800 ABCG22 AT5G08050 AT5G08430 NDC1 PMDH2 14-3-3lambda CBSX3 KNAT4 ATVAMP713 AT-HSP17.6A ANAC083 BETA AT5G14920 ATMIXTA AtCor6.6 ENH1 RVE1 ADG2 ACL5 DIN10 WAV2 ATGER3 ATSIG5 APRR5 ATGID1C G6PD1 RBCS2B BHLH136 COR27 ATGLK2 APE2 ATFRO6 EFO1 AT5G52660 BBX29 PDC2 GATA21 ABI2 ADO1 ATCOL5 AT5G57785 APO2 WNK4 LTP3 ATMYB59 PIF7 APRR1 EMB2728 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. AT5G62350 AtBGAL10 ATOPT4 CLEL AGL31 AGL70 XTH6 ATLFNR1 ATDI8 MSP-1 ABA1 AT5G67385 ATBT4
GO:0019684 photosynthesis, light reaction	BP	4.526e-46	PSAD-2 PSB27 OE23 PSAO CRB GAPA-2 PnsL2 CP24 NDF1 HCF173 NDF6 LHCA2*1 AT1G19740 ATLFNR2 AT1G29700 AB180 AB165 AB140 PRK GAPB Lhca5 FTSH1 AT1G52220 PSAH-2 AT1G54500 AtTLP18.3 PSAG AT1G56500 ATFD2 LHCA3 AT1G67700 ATHPR1 STN7 CRR23 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G75460 AT1G76570 PSBR APG2 CRR3 LHCB2 LHCB2 PGR5 PSAE-2 ATGLK1 AT2G21530 AT2G26500 ALB3 PSBW LHB1B2 LHB1B1 PnsL1 RCA AT2G42220 AT2G43560 PSAP ATCYP38 ATBCA1 LHCB4.2 HCF243 ADS3 NDF4 HCF107 DAC PSBTN AT3G23700 AtCHUP1 GAPA LHCB2 DEG1 PTAC16 CAB4 AT3G48420 LHCA1 PPL1 SBPASE LHCA2 CSP41A PETC ATPC1 APX4 LHCB5 PSAL PGR5-LIKE PORB PPH1 PSAE-1 HCF244 SHM1 LHCB4.1 AT5G03880 FD-GOGAT AT5G08050 FTRA2 PMDH2 ABAR BETA ENH1 ADG2 AT5G19940 ATGER3 ATHMA8 ATSIG5 AT5G38520 APE1 ATGLK2 APE2 AT5G48790 ATFRO7 CRR1 LHCB3 ABI2 NdhN AT5G59250 PSAN ATLFNR1 MSP-1
GO:0009987 cellular process	BP	2.227e-44	AT1G01240 AT1G01260 PIP1;3 ATKEA1 SEC1A FBI1 AtD27 MCCA PSAD-2 AT1G03590 PSB27 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT-PHH1 ATKAO1 ATGLR3.4 HDG2 BT3 AT1G05805 ARI5 ATNTH2 BBX24 ATMYB13 FTSH8 ACD31.2 HPD OE23 ATF2KP MAPKKK13 AT1G07280 ATSMO1 PSAO AVDE1 ACHT4 THA1 ATPPCK1 AtMYB60 AMI1 CRB FHY2 ATBCAT-1 ATBCAT-2 ATMPK1 ATGSTU18 AT1G10585 AMSH2 AT1G10610 GWD Encodes a putative pectin methylesterase/invertase inhibitor. Anti-sense reduction of this gene's transcript results in pollen tube growth retardation and then partial male sterility and reduced seed set. ATCXXS1 ATBETAFRUCT4 ATCCS PEPKR2 AT1G12730 ATUGE1 ICE2 GAPA-2 AT1G13350 Encodes protein phosphatase 2A (PP2A) B'theta subunit. Targeted to peroxisomes. Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. WRKY4 PnsL2 PKS2 SBH2 RHA2A CP24 AT1G15970 NDF1 ATSYP51 ABA3 HCF173 AT1G16840 AT1G16960 AT1G18270 EPR1 AT1G18360 TRM3 AtMYB47 NDF6 AT1G19000 LHCA2*1 ATRL5 AT1G19660 ATCLH1 AT1G19680 BEL10 AT1G19740 ATLFNR2 ATEXP11 AtCOR47 ASG5 HMG HMGB3 AT1G20810 AT1G21010 AT1G21060 AT1G21400 AT1G21590 AT1G21670 AT1G21680 AT1G21730 BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B. UREF AT1G22630 ATMYB3 ATRABG3B FB AOAT1 MENG BBX15 AT1G26580 AT1G26665 ATVTI12 AHK3 SPL11 SPL10 AT1G27520 CYCT1;3 ABCB14 AT1G28310 AtRLP4 ATVOZ1 COR413-TM1 AML5 AT1G29700 AT1G29720 AB180 AB165 AB140 PSAK AAE14 PSAF AtTRM9 ACBP AT1G31920 PRK AtLrgB AT1G32160 TOM2A LOL1 ATMYC2 AT1G33050 AT1G33110 AT1G33700 AT5P1 APRL4 AT1G35420 ATGLR3.3 GAPB AtcFBP TED6 AT1G44000 ATCAO AT1G44770 Lhca5 DYW1 AT1G49010 BBX17 AT1G49210 AT1G49500 ABF1 AT1G49730 FTSH1 NTMC2T5.1 ATERF3 AT1G51110 LYK3 AT1G52220 PSAH-2 ATROPGEF11 ANAC019 AT1G53400 MSL4 ATMPK18 MAP3KA ATMSRB1 AT1G53780 ESP ALDH7B4 AT-RSH3 AT1G54260 ABCD2 AT1G54500 AtTLP18.3 AT1G54820 AT1G55000 PSAG UKL3 AT1G55960 AT1G56210 ATDI19 AT1G56300 AT1G56500 AT1G56720 AT1G57770 CAT2 MSL3 AtHEMA1 AT1G60010 AT1G60590 AtNIK3 ATFD2 LHCA3 ATG8C AT1G62250 AT1G62310 HT1 AT1G62660 UGE3 UBC5 DAA1 UBC28 AT1G64370 AT1G64500 AT1G64680 TUA1 RPOD1 AT1G65190 AT1G65230 PTAC4 AtMYB20 BGLU21 AT1G66330 AT1G66760 GDPDL2 ABA4 AT1G67700 CSK AT1G67870 ATHPR1 ATTPS6 ADO3 BBX27 BBX14 STN7 ACR4 ARC12 ANAC029 AT-EXP1 AIT1 ATCYCD1;1 ATTPS8 KUP6 AOAT2 ABCB26 AT1G70630 JAZ9 CRR23 AT1G70820 AT1G71020 ATMYBL2 AtGDPD4 AT1G71480 AT1G71710 PATL1 TRFL6 AT1G73655 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. AT1G73750 BBX16 AT1G73920 AT1G73980 AtRLP14 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G74730 ATCPK30 JAZ2 JAC1 ATRL6 ATBBD1 BLH3 AT1G75460 encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. GASA1 ATCLV1 AT1G76110 AT1G76450 AtHMGR1 AT1G76530 AT1G76570 AT1G76580 AT1G76720 ATSKP2;2 AGL27 AT1G77090 AtSTP14 AT1G77280 TAPX GNR1 AT1G77930 RAP2.4 AUF1 AT1G78560 BBX22 AT1G78995 PSBR ECT8 ALDH5F1 WRI4 AtLa2 encodes a glycerate kinase which catalyzes the last step of photorespiration C2 cycle. ATXRCC1 AT1G80780 AtJ8 APG2 AtGABP At17.1 AT2G01460 CRR3 ATMAP65-6 ATBPC1 AT2G02570 PLP PKS1 WRKY3 AT2G03390 ATNRP1 AT2G04039 XERICO AT2G04690 AT2G04700 LHCB2 LHCB2 PGR5 PSBX AGT ALDH6B2 AT2G14910 AT2G15020 AtRLP19 ATCOR413-PM1 AT2G16365 ATSERAT3;1 AT2G17650 AT2G17880 HIS1-3 ATMPK7 AtTLP2 HBI1 ATTPS11 ADO2 ABX45 AT2G19650 MIOX2 AtOZF1 PSAE-2 ATGLK1 AT2G21130 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AT2G21530 ATGRP7 ATCAD3 AT2G21960 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. ATUBP4 AtRIBA2 AGL22 SDG23 SQE2 ATPSK2 SCPL8 AT2G24280 AHA5 ATGPX1 EBF1 ATCTH ELF3 PDF1.2b AtGLDP2 AT2G26500 AR781 PLA AT2G26800 CIPK3 AT2G27290 AT2G27500 AT2G28720 ALB3 AT2G28810 ATOEP16-1 CXIP4 CYP707A2 AT2G29300 AT2G29360 AT103-1A PY ANTR1 ABCG31 MAPKKK14 ETC2 TCL2 PSBW AT2G31010 AT2G31040 ATERF15 GLX2-5 BBX25 ATGPX2 AT2G31800 AT2G31810 CVL1 AT2G32090 ATOFP16 BAM6 ATGLR3.5 ATKAO2 ACK2 AtCLO3 ATCPL3 atnudt22 AT2G34140 AT2G34310 LHB1B2 LHB1B1 AT2G35050 KUP11 AT2G35260 SAMTL AT2G36220 BE3 AT2G36410 AT2G36630 PIP2;2 UMAMIT13 FHY1 AT2G37840 CAC3 ATLMCO4 AtAUX1 PDX1L4 ATPDX1.1 AT2G38240 AT2G38300 AT2G38330 ATIREG1 AT2G38800 SNZ ATMTP11 PnsL1 DVL11 RCA ATP5CS ELF4 AT2G40260 ATFER4 Encodes a putative amino acid transporter. ATEXP8 AT2G40620 AT2G40860 AT2G41060 ACA4 AT2G41705 AtSPL9 AT2G42220 FBH4 COR15B COR15 TTL3 ATPPC2 MAX2 HLH1 AML2 AtPIF4 AT2G43280 ATINT1 ETFQO AT2G43540 AT2G43560 AT2G43760 ATSAGT1 AT2G44730 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHAM1 ATATG8E AFO AGL20 PEX11D ATHH2 ATI1 ATMPK12 ATBAG6 AT2G46250 AT2G46320 ARF11 ROPGAP3 APRR9 AT2G46810 PSAP UPB1 AT2G47880 AT2G47890 AT2G48020 AT3G01060 ATCYP38 AT3G01490 ATBCA1 AT3G01520 AT3G01690 ATCOL2 RAD23-3 ATF1 AT3G03870 AT3G03990 AT3G04000 ATNEK2 ATWNK1 ATGID1A AT3G05160 AIF1 RCI2A AT3G05990 AT3G06440 ATPDHK A/N-InvC ATSFR2 AT3G07310 MAP3KE2 ATPLC2 ATPK1 LHCB4.2 ATMT-1 ATRAB8E PIP5K9 AT3G10020 AT3G10060 AtLCY PAL4 ARAF DREB2 AT3G12320 AT3G12710 AT3G13000 AT3G13040 SRF4 DIN4 BGAL1 AtGRF5 GOX2 GOX1 ATNCED3 AT3G14595 HEME1 HCF243 ATMT3 SPA3 ATHM4 ANAC055 AT3G15570 UVR3 AT3G15780 ROD1 PIFI ADS3 MFP1 AT3G16120 AT3G16220 AQP1 NDF4 TCTP ATEBP ARR1 HCF107 ATCRSH CIPK1 AT3G17640 JAI3 DAC AT3G18050 AT3G18500 AT3G19030 ABF4 ATPEN2 AT3G19480 PUT5 AT3G19850 bHLH121 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. JMJ30 PSBTN ABCG15 ATSGP2 PEX22 CYCP2;1 BBX31 ATWNK2 AT3G22440 XBAT35 AT3G23700 AT3G24715 AtCHUP1 ATB' AT3G26240 AT3G26580 GAPA CCL DRB3 LHCB2 DEG1 CYP81D11 AT3G28770 AT3G29410 AFP3 AT-POX AT3G43220 ACD1 ATIVD JK224 AT3G45900 H2B ADF2 ATMYB48 AT3G46370 LUX PTAC16 ATPHS2 AT3G47070 ASN1 PEX11B CAB4 CDF3 AT3G48200 ATBT2 AT3G48420 ATHAP5A AT3G48900 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. ARLA1C KICP-02 SNRK2-2 AtIDD2 BEH1 AT3G51150 AT3G51370 ATSSL4 AT3G51510 AT3G51730 ACX4 ATOFP18 BGAL2 AFC1 SIG3 ATPTR1 LHCA1 PPL1 P5CS2 ATDFD SBPASE AT3G56300 PPD6 AT3G57020 ARR9 AT3G57170 ATVLN3 AT3G57680 AT3G57800 AT3G58020 AtSPP1 AT3G58640 MGT6 ATPIRIN1 AT3G59350 AT3G59780 AT3G59940 AT3G60340 HAT3 GATA4 (AT)VAP ATHAM2 AT3G60690 AT3G61010 AtPP2-A13 AT3G61080 AT3G61160 ATPIP1 LHCA2 AtSLD1 ATHB-12 AT3G62190 AT3G62220 ARFA1E CP12 AT3G62650 AT3G62930 AT3G62950 AtTIR1 CSP41A OEP6 AT3G63240 UNE10 AHDP AT4G01330 AT4G01460 AGY1 UBQ14 AT4G03250 PETC ATRMA1 AtRbcX1 AT4G04340 AtWRKY42 ATPC1 ABC1 ATKEA3 AT4G05070 AT4G05090 AT4G05150 PSBQ UBI10 ATCRY1 APX4 CRRJ LHCB5 RHA1B AT4G11570 ATGPX6 PLDGAMMA2 PLDGAMMA3 AT4G11900 PSAL AT4G12830 MHK AT4G13040 NYC1 ATHAK5 HTA4 AtRLP47 J20 ACD6 AT4G14480 AT4G15260 CYP74B2 AT4G15545 AtCLA1 AT4G15610 AT4G16190 FCA ATINT4 AT4G16490 ATG8F AT4G16670 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AtBAM3 DELTA-TIP2 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. ATSYP23 AT4G17810 ATWRKY28 ATSS4 AT4G18740 AT4G18810 ATPP2-A1 AT4G19860 ATPCAP1 ATM4 APG8A ORP2A PGR5-LIKE ATNYE1 AGL19 AT4G22990 AT4G23050 CRK21 PIP1;5 CRR31 NLP7 ATTRE1 AT4G24480 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) TPD1 CHLM ATCBF2 ATCBF3 ATCNFU3 PSD3 ABI1 BGAL12 CGA1 AtFBA7 AtFBA5 AT4G26555 ATFIM1 AT4G26860 BBX28 PORB AT4G27450 AT4G27700 PPH1 CRF4 AT4G28080 AtPHR1 PSAE-1 ckl4 AtC3H49 AtVPS15 AT4G29990 MERI-5 AT4G30690 AT4G30790 AT4G31050 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. AT4G31860 AT4G32340 ATSDX1 GAMMA-VPE ATH1 ATCBL10 AtGLDP1 AT4G33080 LKR FAB1A ATHDA14 EX1 ABF3 KCS16 CLB6 AT4G34920 AT4G34950 ADF9 AtMYB32 HCF244 AT4G35270 AT4G35810 atbzip14 J11 AT4G36210 UBC17 AT4G36530 BEE2 AtPLT6 AtGBF1 ATMES9 COP3 BT5 SHM1 ATCAD8 STY46 AT4G38690 RD19 SHL1 AT4G39270 FKBP16-2 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT4G39970 AT5G01020 AT5G01260 AIRP2 LHCB4.1 ATFER1 AT5G01750 ATCIPK14 AT5G01990 AT5G02160 CDL1 APRR7 LCL1 UPL4 AT5G02940 UBQ3 AT5G03880 FD-GOGAT PKS4 ATSYTC ATLDA AT5G05200 DREB2 AT5G05600 CBB3 WCRKC1 HAT14 ATPGIP2 AML4 AT5G08050 TCP17 FTRA2 AT5G08415 AT5G08430 NDC1 PMDH2 14-3-3lambda AT5G10650 CBSX3 CIPK5 KNAT4 AT5G11410 AT5G11840 AT-HSP17.6A ANAC083 ABAR AT5G13770 CCS52B CARAB-AK-LYS ROXY2 AT5G14120 MPL1 AT5G14210 AT5G14390 AT5G14410 AT5G14720 BETA AT5G14880 AT5G14920 AT5G14970 GASA4 ATMIXTA ATCNGC2 AT5G16240 ATF2 AtMYB43 AT5G16650 ENH1 RVE1 ER-ANT1 AT5G17670 AT5G18140 AT5G18525 AT5G18600 AtTLP11 NSH3 MPK16 ATIPT5 ADG2 ACL5 AtRbcX2 AT5G19940 AT5G19970 PHT4;5 CHR42 ATGER3 AT5G20810 AKINBETA1 ATHMA8 AT5G22050 A/N-InvE ATSIG5 PGL5 APRR5 AT5G24490 ATTTG1 ATBZIP9 ATCOL4 EBF2 AT5G25770 BGLU37 AtTGG1 AT5G26200 ATIREG3 AT5G27290 ATGID1C SFP2 AT5G27730 AT5G27920 AT5G27950 GME AT5G35170 G6PD1 AT5G35970 PP2C74 CAT3 AT5G38520 APE1 AT5G39590 BHLH136 AT5G40060 AtRLP54 AT5G40450 AT5G40500 ATCLC-A BEL1 ATUBC8 TZP ATAUX2-11 NDH18 AT5G43870 AT5G44020 ATGLK2 AT5G44260 TAO1 AT5G44520 SUV2 ATFKBP13 CIPK20 ATDOG1 APE2 LON2 AT5G47330 AMK2 DIR1 HINT3 AT5G48790 ATFRO7 ATFRO8 CAA33 At-NEET CRR1 AT5G52660 PYL8 UBC10 CLPX AT5G53360 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G53500 AT5G53900 AtHGO PORA LHCB3 ATM2 BBX29 ATHTA1 PDC2 AT5G55620 BAM4 ATCBL2 WIP2 AT5G56850 GATA21 BGAL4 ABI2 ACA8 AHA3 ADO1 AT5G57565 CIPK21 ATCOL5 XBAT32 SKIP1 APO2 NdhN AT5G58280 WNK4 AT5G58800 ftsh9 AT5G58950 COPT1 AT5G59250 ATEXO70H7 ATMYB59 APRR3 ATPDX2 OBP4 ATMYB34 PIF7 APRR1 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. APC1 AT5G62350 CDF1 AT5G62900 AT5G63080 BT1 AT5G63190 CYP94B1 NF-YC4 SHA1 BGAL6 PSAN AT5G64250 AT5G64380 ATOPT4 AT5G64460 AT5G64500 ATBXL4 CLEL AGL31 AGL70 XTH6 ATRLP57 STR16 ATLFNR1 MSP-1 ATHB53 ABA1 DEAR2 CYCD3;2 ATBT4 RBCL RPL32
GO:0006091 generation of precursor metabolites and ...	BP	2.601e-43	PSAD-2 PSB27 BBX24 OE23 PSAO CRB GAPA-2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 CP24 NDF1 HCF173 AT1G18270 NDF6 LHCA2*1 AT1G19740 ATLFNR2 AtCOR47 HMG AT1G29700 AB180 AB165 AB140 PRK GAPB Lhca5 FTSH1 AT1G52220 PSAH-2 AT1G54500 AtTLP18.3 PSAG AT1G56500 ATFD2 LHCA3 AT1G67700 ATHPR1 STN7 CRR23 PATL1 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G75460 AT1G76570 PSBR APG2 CRR3 LHCB2 LHCB2 PGR5 PSAE-2 ATGLK1 AT2G21530 ATGRP7 AT2G26500 ALB3 PSBW LHB1B2 LHB1B1 AT2G36220 PnsL1 RCA AT2G42220 ATPPC2 AT2G43560 ATHH2 PSAP ATCYP38 ATBCA1 RCI2A LHCB4.2 AT3G10020 HCF243 PIFI ADS3 NDF4 HCF107 DAC PSBTN AT3G23700 AtCHUP1 GAPA LHCB2 DEG1 PTAC16 CAB4 AT3G48420 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. SNRK2-2 LHCA1 PPL1 SBPASE ATPIP1 LHCA2 CSP41A PETC ATPC1 APX4 LHCB5 PSAL PGR5-LIKE PIP1;5 AtFBA7 AtFBA5 PORB PPH1 PSAE-1 HCF244 SHM1 RD19 SHL1 LHCB4.1 AT5G03880 FD-GOGAT AT5G08050 FTRA2 PMDH2 14-3-3lambda CBSX3 ABAR BETA ENH1 ADG2 AT5G19940 ATGER3 ATHMA8 ATSIG5 AT5G35170 AT5G38520 APE1 ATGLK2 AT5G44520 APE2 AMK2 AT5G48790 ATFRO7 CRR1 LHCB3 ABI2 NdhN AT5G59250 AT5G62350 PSAN ATLFNR1 MSP-1 RBCL RPL32
GO:0044763 single-organism cellular process	BP	9.663e-42	AT1G01260 PIP1;3 ATKEA1 SEC1A FBI1 AtD27 MCCA PSAD-2 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT-PHH1 ATKAO1 ATGLR3.4 HDG2 ARI5 ATNTH2 BBX24 ACD31.2 HPD OE23 AT1G07280 ATSMO1 PSAO AVDE1 ACHT4 THA1 AtMYB60 AMI1 CRB FHY2 ATBCAT-1 ATBCAT-2 ATMPK1 ATGSTU18 GWD Encodes a putative pectin methylesterase/invertase inhibitor. Anti-sense reduction of this gene's transcript results in pollen tube growth retardation and then partial male sterility and reduced seed set. ATCXXS1 ATCCS AT1G12730 ICE2 GAPA-2 Encodes protein phosphatase 2A (PP2A) B'theta subunit. Targeted to peroxisomes. Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 SBH2 RHA2A CP24 AT1G15970 NDF1 ATSYP51 ABA3 AT1G16840 AT1G18270 TRM3 NDF6 LHCA2*1 AT1G19660 ATCLH1 ATLFNR2 ATEXP11 AtCOR47 ASG5 HMG AT1G21400 AT1G21670 AT1G21680 AT1G21730 BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B. UREF AT1G22630 ATMYB3 ATRABG3B AOAT1 MENG ATVTI12 AHK3 AT1G27520 CYCT1;3 ABCB14 AtRLP4 COR413-TM1 AML5 AT1G29700 PSAK AAE14 PSAF ACBP PRK AtLrgB AT1G32160 LOL1 ATMYC2 AT1G33050 AT1G33110 AT1G33700 AT5P1 APRL4 AT1G35420 ATGLR3.3 GAPB AtcFBP ATCAO Lhca5 AT1G49500 ABF1 FTSH1 NTMC2T5.1 ATERF3 AT1G51110 LYK3 PSAH-2 ATROPGEF11 ANAC019 MSL4 ATMPK18 MAP3KA ESP ALDH7B4 AT-RSH3 ABCD2 AT1G54500 AtTLP18.3 PSAG AT1G55960 AT1G56210 AT1G56500 AT1G57770 CAT2 MSL3 AtHEMA1 AtNIK3 ATFD2 LHCA3 ATG8C AT1G62250 HT1 AT1G62660 DAA1 UBC28 AT1G64370 AT1G64500 TUA1 AT1G65230 PTAC4 BGLU21 AT1G66330 AT1G66760 GDPDL2 ABA4 AT1G67700 CSK AT1G67870 ATHPR1 ATTPS6 BBX14 STN7 ACR4 ARC12 ANAC029 AT-EXP1 AIT1 ATCYCD1;1 ATTPS8 KUP6 AOAT2 ABCB26 JAZ9 CRR23 AT1G70820 ATMYBL2 AtGDPD4 AT1G71480 AT1G71710 PATL1 AT1G73655 AT1G73750 AT1G73920 AtRLP14 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G74730 ATCPK30 JAZ2 JAC1 ATBBD1 AT1G75460 GASA1 ATCLV1 AT1G76110 AT1G76450 AtHMGR1 AT1G76530 AT1G76570 AT1G77090 AtSTP14 TAPX GNR1 RAP2.4 AUF1 AT1G78560 BBX22 AT1G78995 PSBR ECT8 ALDH5F1 WRI4 AtLa2 ATXRCC1 APG2 AtGABP AT2G01460 CRR3 ATMAP65-6 AT2G02570 PLP PKS1 AT2G03390 ATNRP1 XERICO AT2G04690 AT2G04700 PGR5 AGT ALDH6B2 AT2G14910 AT2G15020 AtRLP19 ATCOR413-PM1 ATSERAT3;1 AT2G17650 ATMPK7 HBI1 ATTPS11 ADO2 ABX45 AT2G19650 MIOX2 AtOZF1 PSAE-2 ATGLK1 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AT2G21530 ATGRP7 ATCAD3 AT2G21960 AtRIBA2 AGL22 SDG23 SQE2 ATPSK2 SCPL8 AT2G24280 AHA5 ATGPX1 EBF1 ELF3 PDF1.2b AtGLDP2 AR781 PLA AT2G26800 CIPK3 AT2G27290 AT2G27500 ALB3 ATOEP16-1 CXIP4 CYP707A2 AT2G29300 AT103-1A PY ANTR1 ABCG31 MAPKKK14 ETC2 TCL2 AT2G31040 ATERF15 GLX2-5 BBX25 ATGPX2 AT2G31800 AT2G31810 CVL1 AT2G32090 BAM6 ATGLR3.5 ATKAO2 ACK2 AtCLO3 ATCPL3 atnudt22 AT2G34310 AT2G35050 KUP11 AT2G35260 SAMTL AT2G36220 BE3 AT2G36410 PIP2;2 FHY1 AT2G37840 CAC3 ATLMCO4 AtAUX1 PDX1L4 ATPDX1.1 AT2G38240 AT2G38330 ATIREG1 AT2G38800 ATMTP11 PnsL1 DVL11 RCA ATP5CS ELF4 ATFER4 Encodes a putative amino acid transporter. ATEXP8 AT2G41060 ACA4 AT2G41705 AT2G42220 COR15B COR15 TTL3 ATPPC2 AML2 AtPIF4 AT2G43280 ATINT1 ETFQO AT2G43560 ATSAGT1 AT2G44920 ATHAM1 ATATG8E AFO AGL20 ATHH2 ATI1 ATMPK12 ATBAG6 AT2G46320 ROPGAP3 APRR9 PSAP AT2G47880 AT2G47890 AT2G48020 AT3G01060 ATCYP38 ATBCA1 AT3G01690 RAD23-3 ATF1 AT3G03870 AT3G03990 AT3G04000 ATGID1A AT3G05160 AIF1 RCI2A AT3G05990 AT3G06440 ATPDHK ATSFR2 AT3G07310 MAP3KE2 ATPLC2 LHCB4.2 ATMT-1 ATRAB8E PIP5K9 AT3G10020 AT3G10060 AtLCY PAL4 ARAF AT3G12320 AT3G12710 AT3G13040 SRF4 DIN4 BGAL1 AtGRF5 ATNCED3 HEME1 ATMT3 ATHM4 ANAC055 AT3G15570 UVR3 ROD1 PIFI ADS3 MFP1 AT3G16120 AQP1 NDF4 TCTP ATEBP ARR1 HCF107 ATCRSH CIPK1 AT3G17640 JAI3 DAC AT3G18050 AT3G18500 AT3G19030 ABF4 ATPEN2 AT3G19480 PUT5 bHLH121 ABCG15 ATSGP2 CYCP2;1 AT3G22440 AT3G23700 AtCHUP1 ATB' AT3G26240 AT3G26580 GAPA CCL DRB3 LHCB2 DEG1 CYP81D11 AT3G28770 AT3G29410 AFP3 AT-POX AT3G43220 ACD1 ATIVD JK224 AT3G45900 H2B ADF2 AT3G46370 PTAC16 ATPHS2 AT3G47070 ASN1 PEX11B CAB4 AT3G48200 ATBT2 AT3G48420 AT3G48900 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. ARLA1C KICP-02 SNRK2-2 AtIDD2 AT3G51150 ATSSL4 AT3G51510 AT3G51730 ACX4 BGAL2 ATPTR1 PPL1 P5CS2 ATDFD SBPASE AT3G56300 PPD6 ARR9 AT3G57170 ATVLN3 AT3G57680 AtSPP1 AT3G58640 MGT6 ATPIRIN1 AT3G59780 AT3G59940 (AT)VAP ATHAM2 AT3G60690 AT3G61010 AT3G61080 ATPIP1 AtSLD1 ARFA1E AT3G62930 AT3G62950 AtTIR1 CSP41A OEP6 AT3G63240 AHDP AGY1 PETC ATRMA1 AT4G04340 ATPC1 ABC1 ATKEA3 AT4G05070 AT4G05090 AT4G05150 PSBQ ATCRY1 APX4 LHCB5 AT4G11570 ATGPX6 PLDGAMMA2 PLDGAMMA3 AT4G11900 PSAL NYC1 ATHAK5 AtRLP47 J20 ACD6 AT4G15260 CYP74B2 AT4G15545 AtCLA1 AT4G15610 AT4G16190 FCA ATINT4 AT4G16670 AtBAM3 DELTA-TIP2 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. ATSYP23 AT4G17810 ATWRKY28 ATSS4 ATPP2-A1 AT4G19860 ATPCAP1 ATM4 ORP2A PGR5-LIKE ATNYE1 AT4G22990 AT4G23050 PIP1;5 CRR31 NLP7 ATTRE1 TPD1 CHLM PSD3 ABI1 BGAL12 CGA1 AtFBA7 AtFBA5 AT4G26555 ATFIM1 AT4G26860 PORB AT4G27450 AT4G27700 PPH1 AT4G28080 AtPHR1 PSAE-1 AtVPS15 MERI-5 AT4G31050 AT4G31860 AT4G32340 ATSDX1 ATH1 ATCBL10 AtGLDP1 LKR FAB1A ATHDA14 EX1 ABF3 KCS16 CLB6 AT4G34920 AT4G34950 ADF9 AtMYB32 HCF244 AT4G35810 atbzip14 AT4G36530 BEE2 AtPLT6 AtGBF1 ATMES9 COP3 SHM1 ATCAD8 STY46 AT4G38690 RD19 SHL1 AT4G39270 AT4G39970 AT5G01020 AT5G01260 AIRP2 ATFER1 AT5G01750 ATCIPK14 AT5G01990 AT5G02160 CDL1 APRR7 AT5G02940 AT5G03880 FD-GOGAT PKS4 ATSYTC ATLDA AT5G05200 AT5G05600 CBB3 WCRKC1 ATPGIP2 AML4 AT5G08050 TCP17 FTRA2 AT5G08415 AT5G08430 NDC1 PMDH2 14-3-3lambda AT5G10650 CBSX3 CIPK5 AT5G11840 ANAC083 ABAR CCS52B CARAB-AK-LYS ROXY2 AT5G14120 MPL1 AT5G14210 AT5G14410 BETA AT5G14880 AT5G14970 GASA4 ATMIXTA ATCNGC2 AT5G16240 ATF2 AtMYB43 ENH1 RVE1 ER-ANT1 AT5G17670 AT5G18525 AT5G18600 NSH3 MPK16 ATIPT5 ADG2 ACL5 AT5G19940 AT5G19970 PHT4;5 CHR42 ATGER3 AT5G20810 AKINBETA1 ATHMA8 A/N-InvE ATSIG5 PGL5 APRR5 ATTTG1 ATBZIP9 ATCOL4 EBF2 AT5G25770 BGLU37 AtTGG1 AT5G26200 ATIREG3 AT5G27290 ATGID1C SFP2 AT5G27920 AT5G27950 GME AT5G35170 G6PD1 AT5G35970 CAT3 AT5G38520 APE1 AT5G39590 BHLH136 AtRLP54 AT5G40450 AT5G40500 ATCLC-A BEL1 ATUBC8 TZP ATAUX2-11 NDH18 AT5G43870 AT5G44020 ATGLK2 TAO1 AT5G44520 SUV2 ATFKBP13 CIPK20 ATDOG1 APE2 LON2 AMK2 DIR1 HINT3 ATFRO7 ATFRO8 CAA33 At-NEET CRR1 PYL8 CLPX thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G53500 AT5G53900 AtHGO PORA ATM2 ATCBL2 GATA21 BGAL4 ABI2 ACA8 AHA3 ADO1 CIPK21 ATCOL5 XBAT32 SKIP1 APO2 NdhN WNK4 COPT1 AT5G59250 ATEXO70H7 APRR3 ATPDX2 ATMYB34 APRR1 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. APC1 AT5G62350 AT5G63080 AT5G63190 CYP94B1 NF-YC4 SHA1 PSAN AT5G64250 ATOPT4 AT5G64460 AT5G64500 CLEL ATRLP57 STR16 ATLFNR1 MSP-1 ABA1 CYCD3;2
GO:0071704 organic substance metabolic process	BP	9.785e-42	AT1G01240 AT1G01260 PIP1;3 AT1G02300 FBI1 AtD27 MCCA PSAD-2 AT1G03520 AT1G03590 PSB27 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT-PHH1 ATKAO1 HDG2 BT3 AT1G05805 ARI5 ATNTH2 BBX24 ATMYB13 FTSH8 ACD31.2 HPD OE23 ATF2KP MAPKKK13 AT1G07280 ATSMO1 PSAO AVDE1 ACHT4 THA1 ATPPCK1 AtMYB60 AMI1 CRB FHY2 ATBCAT-1 ATBCAT-2 ATMPK1 ATGSTU18 AT1G10585 AMSH2 AT1G10610 AT1G10640 GWD ATCXXS1 ATBETAFRUCT4 PEPKR2 AT1G12730 ATUGE1 ICE2 GAPA-2 AT1G13350 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. WRKY4 PnsL2 PKS2 SBH2 RHA2A GLYI4 CP24 AT1G15970 NDF1 ABA3 HCF173 AT1G16840 AT1G16960 AT1G18270 EPR1 AtMYB47 NDF6 AT1G19000 LHCA2*1 ATRL5 AT1G19660 ATCLH1 AT1G19680 BEL10 AT1G19740 ATLFNR2 AtCOR47 ASG5 HMG HMGB3 AT1G20810 AT1G21010 AT1G21060 AT1G21590 AT1G21670 AT1G21680 BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B. UREF AT1G22630 ATMYB3 FB AOAT1 MENG BBX15 AT1G26580 AT1G26665 AHK3 SPL11 SPL10 AT1G27520 CYCT1;3 AT1G28310 ATVOZ1 AML5 AT1G29700 AT1G29720 PSAK AAE14 PSAF AtTRM9 ACBP AT1G31920 PRK AT1G32160 ATMYC2 AT1G33050 AT1G33110 AT1G33270 AT1G33700 AT1G33811 AT5P1 AT1G35420 GAPB AtcFBP ATCAO Lhca5 DYW1 AT1G48100 AT1G49010 BBX17 AT1G49210 AT1G49500 ABF1 AT1G49730 FTSH1 NTMC2T5.1 ATERF3 AT1G51110 LYK3 AT1G52220 PSAH-2 ANAC019 AT1G53400 ATMPK18 MAP3KA ATMSRB1 AT1G53780 GLIP5 ESP ALDH7B4 AT-RSH3 ABCD2 AT1G54500 AtTLP18.3 AT1G54820 AT1G55000 PSAG UKL3 AT1G55960 AT1G56210 ATDI19 AT1G56300 AT1G56500 AT1G56720 AT1G57770 CAT2 MSL3 AtHEMA1 RXW8 AT1G60010 AT1G60590 AtNIK3 LHCA3 ATG8C AT1G62250 AT1G62310 HT1 AT1G62660 UGE3 ATSPPL2 UBC5 UBC28 AT1G64370 AT1G64500 AT1G64680 TUA1 RPOD1 AT1G65190 AT1G65230 ATHEX1 AtMYB20 BGLU21 AT1G66330 AT1G66760 GDPDL2 ABA4 AT1G67700 CSK AT1G67870 ATHPR1 ATTPS6 ADO3 BBX27 BBX14 AT1G68660 STN7 ACR4 ANAC029 ATCYCD1;1 ATTPS8 AOAT2 ABCB26 JAZ9 CRR23 AT1G70820 AT1G71020 ATMYBL2 AtGDPD4 AT1G71480 AT1G71710 PATL1 TRFL6 AT1G73655 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. AT1G73750 BBX16 AT1G73920 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATCPK30 JAZ2 ATRL6 ATBBD1 BLH3 AT1G75460 encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. GASA1 ATCLV1 AT1G76110 AT1G76450 AtHMGR1 AT1G76570 AT1G76580 AT1G76720 ATSKP2;2 AGL27 AT1G77090 AT1G77280 GNR1 AT1G77930 RAP2.4 BBX22 AT1G78995 PSBR ECT8 ALDH5F1 AT1G79600 WRI4 AtLa2 ATXRCC1 AT1G80780 AtJ8 APG2 At17.1 AT2G01460 ATBPC1 AT2G02570 PLP PKS1 AT2G03310 WRKY3 AT2G03390 XERICO AT2G04690 AT2G04700 ALDH6B2 AT2G14910 AT2G15020 AtRLP19 AT2G16365 ATSERAT3;1 AT2G17650 AT2G17880 ATMPK7 AtTLP2 HBI1 ATTPS11 ADO2 ABX45 MIOX2 AtOZF1 ATGLK1 AT2G21130 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AT2G21530 ATGRP7 ATCAD3 AT2G21960 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. ATUBP4 AtRIBA2 AGL22 SDG23 SQE2 SCPL13 SCPL8 AT2G24280 AHA5 EBF1 ATCTH AtGLDP2 AT2G26500 PLA AT2G26800 CIPK3 AT2G27290 AT2G27500 ALB3 AT2G28810 CYP707A2 AT2G29300 AT2G29360 AT103-1A PY ANTR1 MAPKKK14 ETC2 TCL2 PSBW AT2G31010 AT2G31040 ATERF15 GLX2-5 BBX25 AT2G31800 AT2G31810 CVL1 AT2G32090 ATOFP16 BAM6 ATKAO2 ACK2 BGLU33 AtCLO3 ATCPL3 atnudt22 AT2G34140 AT2G34310 AT2G35050 AT2G35260 BE3 AT2G36630 UMAMIT13 AT2G37585 FHY1 AT2G37840 CAC3 ATLMCO4 AtAUX1 PDX1L4 ATPDX1.1 AT2G38300 AT2G38800 SNZ ATMTP11 PnsL1 DVL11 RCA ATP5CS AT2G40260 Encodes a putative amino acid transporter. AT2G40620 AT2G40860 AT2G41060 ACA4 AT2G41705 AtSPL9 AT2G42220 FBH4 COR15 TTL3 ATPPC2 MAX2 HLH1 AtPIF4 AT2G43280 ETFQO AT2G43540 AT2G43560 AT2G43760 ATSAGT1 AT2G44730 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHAM1 AGL20 ATHH2 ATMPK12 ATBAG6 AT2G46250 ARF11 APRR9 AT2G46810 PSAP AtGolS1 UPB1 AT2G47890 AT3G01060 ATCYP38 AT3G01490 ATBCA1 AT3G01520 ATPPT2 AT3G01690 RAD23-3 ATF1 AT3G03870 AT3G03990 AT3G04000 ATNEK2 ATWNK1 ATGID1A AIF1 RCI2A AT3G06440 ATPDHK A/N-InvC ATSFR2 MAP3KE2 ATPLC2 ATPK1 LHCB4.2 ATRAB8E PIP5K9 AT3G10060 AtLCY PAL4 CPY ARAF DREB2 FAD2 AT3G12320 AT3G12710 AT3G13000 AT3G13040 SRF4 BGAL1 AtGRF5 ATNCED3 AT3G14595 HEME1 ATMT3 SPA3 ATHM4 ANAC055 AT3G15570 UVR3 AT3G15780 ROD1 ADS3 MFP1 AT3G16220 NDF4 ATEBP ARR1 HCF107 ATCRSH CIPK1 JAI3 DAC AT3G18500 AT3G19030 ABF4 ATPEN2 AT3G19480 PUT5 AT3G19850 bHLH121 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. JMJ30 PSBTN ABCG15 CYCP2;1 BBX31 ATWNK2 AT3G22440 XBAT35 AT3G23480 AT3G23700 AT3G24715 AtCHUP1 AT3G26085 AT3G26580 GAPA DRB3 AT3G27110 LHCB2 DEG1 AT3G28220 AFP3 AT-POX AT3G43220 ACD1 ATIVD JK224 AT3G45900 ATMYB48 AT3G46370 LUX PTAC16 ATPHS2 AT3G47070 ASN1 PEX11B CAB4 CDF3 AT3G47800 AT3G48200 CEP3 ATBT2 AT3G48420 ATHAP5A AT3G48900 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. ARLA1C SNRK2-2 AtIDD2 BEH1 AT3G51370 ATSSL4 AT3G51510 AT3G51730 ACX4 ATOFP18 AT3G52740 BGAL2 AFC1 SIG3 ATPTR1 LHCA1 PPL1 P5CS2 ATDFD SBPASE AT3G56300 AT3G57020 ARR9 AT3G57170 ATVLN3 AT3G57470 AtSIP2 AT3G57680 AT3G57800 AT3G58020 AtSPP1 AT3G58640 AT3G59350 AT3G59780 AT3G60340 HAT3 GATA4 (AT)VAP ATHAM2 AtPP2-A13 AT3G61080 AT3G61160 ATPIP1 AT3G61490 AtSLD1 ATHB-12 AT3G62190 AT3G62220 ARFA1E CP12 AT3G62650 BGLU8 AtTIR1 CSP41A OEP6 AT3G63240 UNE10 AHDP AT4G01130 AT4G01330 AT4G01460 GATL6 UBQ14 AT4G03250 PETC ATRMA1 AtRbcX1 AT4G04340 AtWRKY42 ATPC1 ATKEA3 AT4G05070 AT4G05090 AT4G05150 PSBQ UBI10 ATCRY1 APX4 CRRJ LHCB5 RHA1B AT4G11570 PLDGAMMA2 PLDGAMMA3 AT4G11900 PSAL AT4G12830 scpl20 MHK AT4G13040 NYC1 AT4G13550 J20 AT4G14480 AT4G15260 CYP74B2 AT4G15545 AtCLA1 AT4G16190 FCA encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AtBAM3 AT4G17150 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17810 ATWRKY28 ATSS4 AT4G18740 AT4G18810 CCD4 ATPP2-A1 AT4G19860 ATPCAP1 ATM4 AT4G21650 DER2.1 ORP2A PGR5-LIKE ATNYE1 AGL19 AT4G23050 CRK21 PIP1;5 AT4G23730 AT4G23820 CRR31 NLP7 ATTRE1 AT4G24480 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) CHLM ATCBF2 ATCBF3 PSD3 ABI1 BGAL12 CGA1 AtFBA7 AtFBA5 AT4G26555 AT4G26860 BBX28 PORB AT4G27700 PPH1 BGLU9 CRF4 AT4G28080 AtPHR1 PSAE-1 ckl4 AtC3H49 AtVPS15 AT4G29990 MERI-5 AT4G30690 AT4G31050 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. AT4G31860 AT4G32340 ATSDX1 GAMMA-VPE ATH1 ATCBL10 AtGLDP1 AT4G33080 LKR FAB1A ATHDA14 ABF3 KCS16 CLB6 AT4G34920 AT4G34950 AtMYB32 HCF244 AT4G35270 AT4G35810 atbzip14 J11 AT4G36190 AT4G36210 UBC17 AT4G36530 BEE2 AtPLT6 AtGBF1 ATMES9 KAI2 BT5 SHM1 ATCAD8 STY46 AT4G38650 AT4G38690 RD19 SHL1 AT4G39270 FKBP16-2 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT4G39970 AT5G01020 AT5G01260 AIRP2 LHCB4.1 AT5G01750 ATCIPK14 AT5G02160 CDL1 APRR7 LCL1 UPL4 AT5G02940 UBQ3 AT5G03880 FD-GOGAT ATSYTC ATLDA AT5G05200 DREB2 AT5G05600 CBB3 WCRKC1 HAT14 ATPGIP2 AT5G08050 TCP17 FTRA2 AT5G08415 AT5G08430 PMDH2 14-3-3lambda CBSX3 CIPK5 KNAT4 AT5G11410 AT5G11840 AT-HSP17.6A ANAC083 ABAR ATPDAT CCS52B CARAB-AK-LYS ROXY2 AT5G14120 MPL1 AT5G14210 AT5G14410 AT5G14720 BETA AT5G14970 GASA4 ATMIXTA AT5G16240 ATF2 AtMYB43 AT5G16650 ENH1 RVE1 AT5G17670 AT5G18140 AT5G18525 AT5G18600 AT5G18640 AtTLP11 NSH3 MPK16 ATIPT5 AT5G19120 ADG2 ACL5 AtRbcX2 AT5G19940 CHR42 WAV2 ATGER3 AKINBETA1 ATHMA8 AT5G22050 A/N-InvE AT5G22850 AT5G22860 ATSIG5 AT5G24155 PGL5 APRR5 AT5G24490 ATTTG1 ATBZIP9 ATCOL4 EBF2 AT5G25770 BGLU37 AtTGG1 AT5G26622 ATGID1C AT5G27730 AT5G27950 GME AT5G35170 G6PD1 AT5G35970 PP2C74 CAT3 RBCS2B AT5G38510 AT5G38520 APE1 AT5G39590 AT5G40060 AtRLP54 AT5G40450 AT5G40500 ATCLC-A BEL1 ATUBC8 TZP ATAUX2-11 NDH18 AT5G44020 ATGLK2 AT5G44260 AT5G44520 AT5G44530 AT5G45650 ATFKBP13 CIPK20 APE2 LON2 AT5G47330 AMK2 HINT3 AT5G48790 ATBXL1 ATFRO8 CAA33 At-NEET CRR1 EFO1 AT5G52660 UBC10 CLPX AT5G53360 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO PORA BBX29 PDC2 BAM4 ATCBL2 AT5G56850 GATA21 BGAL4 ABI2 ACA8 ORP4C AHA3 ADO1 AT5G57565 CIPK21 AT5G57655 ATCOL5 XBAT32 AT5G57785 APO2 NdhN AT5G58280 WNK4 AT5G58800 ftsh9 AT5G58950 ATMYB59 APRR3 ATPDX2 OBP4 ATMYB34 PIF7 APRR1 EMB2728 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AT5G62350 CDF1 AT5G62900 AT5G63080 BT1 CYP94B1 NF-YC4 SHA1 BGAL6 AtBGAL10 PSAN AtMC3 AT5G64250 AT5G64380 AT5G64500 ATBXL4 AGL31 AGL70 XTH6 STR16 ATLFNR1 MSP-1 ATHB53 ABA1 DEAR2 ATBT4 RBCL RPL32
GO:0042221 response to chemical	BP	2.913e-41	AT1G01260 PIP1;3 FBI1 MCCA AT-PHH1 ATGLR3.4 AT1G05340 BT3 BBX24 ATMYB13 OE23 THA1 AtMYB60 CRB FHY2 ATBCAT-2 ATMPK1 ATGSTU18 GWD AT1G11210 ATBETAFRUCT4 ATCCS Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. RHA2A GLYI4 ABA3 EPR1 TRM3 AtMYB47 LHCA2*1 ATCLH1 ATLFNR2 AtCOR47 AT1G20470 ASG5 HMG AT1G21400 AT1G21590 ATMYB3 FB AOAT1 AT1G25480 AHK3 ABCB14 DRM1 COR413-TM1 AT1G29460 AB165 PRK LOL1 ATMYC2 AT1G33050 AT1G33110 OHP2 ATGLR3.3 GAPB AtcFBP ATH5 AT1G49010 ABF1 ATERF3 ABCG12 ANAC019 ESP ALDH7B4 AT1G56220 ATDI19 MSL3 AtHEMA1 AT1G60010 ATFD2 AT1G62660 UBC28 RPOD1 AT1G66330 AT1G66760 ATHPR1 BBX14 ACR4 AT-EXP1 ABCB26 AtCLO4 JAZ9 AT1G70820 ATMYBL2 PATL1 TRFL6 AT1G73480 AT1G73980 ATCPK30 AT1G74910 JAZ2 AT1G75460 encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. AT1G75580 GASA1 AT1G76110 ATL8 AT1G77280 RAP2.4 AUF1 BBX22 PSBR AtLa2 ATBPC1 ATNRP1 XERICO PGR5 AGT AtRLP19 ATCOR413-PM1 AT2G17650 AT2G17880 HIS1-3 ATMPK7 HBI1 ABX45 ATGLK1 AT2G21130 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATGRP7 AGL22 AtGRF1 AT2G23840 EBF1 ELF3 PDF1.2b AR781 PLA CIPK3 AT2G27140 AT2G27500 ATOEP16-1 CXIP4 AT103-1A PY ANTR1 ABCG31 MAPKKK14 ATERF15 BBX25 AT2G32090 AtCLO3 ATCPL3 AT2G36220 AT2G37030 PIP2;2 AT2G37950 AtAUX1 PDX1L4 AT2G38240 AT2G38330 ATMTP11 ACR9 RCA ATP5CS AT2G39920 ATHSPRO2 ATFER4 Encodes a putative amino acid transporter. FBH4 COR15B COR15 TTL3 MAX2 AtPIF4 ATSAGT1 AFO AGL20 ATHH2 ATMPK12 ATBAG6 ARF11 AT2G46690 PSAP AtGolS1 ATCYP38 ATBCA1 AT3G01520 AT3G04000 ATGID1A AT3G05640 AIF1 RCI2A AT3G07310 LHCB4.2 AT3G10060 DREB2 AT3G11110 AT3G11930 AT3G12320 DIN4 AtGRF5 ATNCED3 HEME1 ATMT3 AT3G15450 ANAC055 AT3G15630 TCTP ATEBP ARR1 CIPK1 JAI3 AT3G18050 ABF4 BBX31 GAPA DRB3 LHCB2 CYP81D11 AT3G29410 AFP3 AT-POX ATIVD JK224 ATMYB48 ATPHS2 ASN1 ATBT2 ARLA1C SNRK2-2 AtIDD2 AT3G52480 AT3G52740 LHCA1 ABCG19 P5CS2 SBPASE AT3G57020 ARR9 AtSPP1 ATPIRIN1 AT3G59350 AT3G59940 AT3G60690 AtPP2-A13 ATPIP1 ATHB-12 CP12 AT3G62550 AtTIR1 AT4G01330 PETC DFL2 AtRbcX1 ABC1 UBI10 ATCRY1 LHCB5 RHA1B ATGPX6 ACD6 AT4G15545 AT4G15610 DELTA-TIP2 ATWRKY28 ATPP2-A1 ATPCAP1 ATM4 IQD22 PIP1;5 NLP7 ECIP1 ATCBF3 ABI1 CGA1 PORB AT4G27450 AT4G28080 AT4G29110 AtVPS15 MERI-5 AT4G31860 AT4G32440 AtGLDP1 LKR EX1 ABF3 CLB6 ADF9 AtMYB32 ATSEN1 atbzip14 UBC17 BEE2 AT4G37220 KAI2 COP3 BT5 SHM1 ATCAD8 AT4G38840 AT4G38860 RD19 SHL1 AT4G39270 LHCB4.1 ATFER1 CDL1 LCL1 FD-GOGAT DREB2 AT5G05600 ABCG22 ATPGIP2 PMDH2 14-3-3lambda AT5G10650 CBSX3 AT-HSP17.6A ANAC083 CCS52B AT5G14120 BETA FDH AT5G14920 GASA4 ATMIXTA AtCor6.6 AtMYB43 RVE1 SAUR20 AT5G18030 NSH3 AILP1 AT5G19970 DIN10 AT5G20810 AKINBETA1 ATTTG1 ATBZIP9 ATCOL4 EBF2 BGLU37 AtTGG1 ATGID1C BHLH136 AtRLP54 ATCLC-A BEL1 ATUBC8 ATAUX2-11 ATGLK2 LCR77 CIPK20 ATDOG1 DIR1 CAA33 EFO1 AT5G52660 PYL8 AT5G53900 AtHGO PORA AT5G55620 ATCBL2 ATOXS3 GATA21 ABI2 AT5G57340 ATCOL5 XBAT32 AT5G57785 SKIP1 WNK4 LTP3 ATMYB59 ATMYB34 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. AT5G62350 BT1 AT5G63190 CYP94B1 NF-YC4 SHA1 AT5G64250 AT5G64460 XTH6 ATLFNR1 ATDI8 MSP-1 ATHB53 ABA1 ATBT4 RBCL
GO:0010033 response to organic substance	BP	5.322e-41	AT1G01260 FBI1 MCCA ATGLR3.4 AT1G05340 BT3 BBX24 ATMYB13 OE23 THA1 AtMYB60 CRB ATBCAT-2 ATMPK1 ATGSTU18 GWD AT1G11210 ATBETAFRUCT4 RHA2A GLYI4 ABA3 EPR1 TRM3 AtMYB47 LHCA2*1 ATCLH1 ATLFNR2 AtCOR47 AT1G20470 ASG5 AT1G21400 AT1G21590 ATMYB3 AOAT1 AHK3 ABCB14 DRM1 COR413-TM1 AT1G29460 AB165 PRK ATMYC2 AT1G33050 OHP2 ATGLR3.3 GAPB AtcFBP AT1G49010 ABF1 ATERF3 ABCG12 ANAC019 ESP ALDH7B4 AT1G56220 MSL3 AT1G60010 ATFD2 AT1G62660 UBC28 RPOD1 AT1G66760 BBX14 ACR4 AT-EXP1 AtCLO4 JAZ9 ATMYBL2 AT1G73480 AT1G73980 ATCPK30 JAZ2 AT1G75460 encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. AT1G75580 GASA1 AT1G76110 ATL8 AT1G77280 RAP2.4 AUF1 BBX22 PSBR ATBPC1 ATNRP1 XERICO PGR5 AGT AtRLP19 ATCOR413-PM1 AT2G17650 AT2G17880 HBI1 ABX45 ATGLK1 AT2G21130 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AGL22 AtGRF1 AT2G23840 EBF1 ELF3 PDF1.2b AR781 PLA CIPK3 AT2G27500 ATOEP16-1 AT103-1A PY ANTR1 MAPKKK14 ATERF15 BBX25 AT2G32090 AtCLO3 ATCPL3 AT2G36220 AT2G37030 PIP2;2 AT2G37950 AtAUX1 PDX1L4 AT2G38240 ACR9 RCA ATP5CS ATHSPRO2 Encodes a putative amino acid transporter. COR15 TTL3 AtPIF4 AFO AGL20 ATMPK12 ARF11 AT2G46690 PSAP AtGolS1 ATCYP38 ATBCA1 AT3G01520 AT3G04000 ATGID1A AT3G05640 AIF1 RCI2A AT3G07310 LHCB4.2 AT3G11110 AT3G11930 AT3G12320 DIN4 AtGRF5 ATNCED3 ATMT3 AT3G15450 ANAC055 AT3G15630 TCTP ATEBP ARR1 CIPK1 JAI3 AT3G18050 ABF4 BBX31 GAPA DRB3 LHCB2 CYP81D11 AT3G29410 AFP3 ATIVD JK224 ATMYB48 ASN1 ATBT2 ARLA1C SNRK2-2 AtIDD2 AT3G52480 AT3G52740 LHCA1 P5CS2 SBPASE AT3G57020 ARR9 AtSPP1 ATPIRIN1 AT3G59350 AT3G59940 AT3G60690 AtPP2-A13 ATPIP1 ATHB-12 CP12 AT3G62550 AtTIR1 AT4G01330 PETC DFL2 UBI10 LHCB5 RHA1B ACD6 AT4G15545 AT4G15610 ATWRKY28 ATPP2-A1 ATPCAP1 ATM4 IQD22 PIP1;5 ECIP1 ATCBF3 ABI1 CGA1 PORB AT4G27450 AT4G28080 AT4G29110 AtVPS15 MERI-5 AT4G32440 LKR ABF3 ADF9 AtMYB32 ATSEN1 atbzip14 UBC17 BEE2 AT4G37220 KAI2 COP3 BT5 ATCAD8 AT4G38840 AT4G38860 AT4G39270 LHCB4.1 CDL1 LCL1 FD-GOGAT DREB2 AT5G05600 ATPGIP2 PMDH2 14-3-3lambda AT5G10650 ANAC083 CCS52B BETA AT5G14920 GASA4 ATMIXTA AtCor6.6 AtMYB43 RVE1 SAUR20 AT5G18030 NSH3 AILP1 DIN10 AT5G20810 AKINBETA1 ATTTG1 ATBZIP9 ATCOL4 EBF2 BGLU37 AtTGG1 ATGID1C BHLH136 AtRLP54 BEL1 ATUBC8 ATAUX2-11 ATGLK2 LCR77 CIPK20 ATDOG1 DIR1 EFO1 AT5G52660 PYL8 AT5G53900 AtHGO PORA AT5G55620 ATCBL2 GATA21 ABI2 AT5G57340 XBAT32 AT5G57785 SKIP1 LTP3 ATMYB59 ATMYB34 BT1 AT5G63190 CYP94B1 NF-YC4 SHA1 AT5G64460 XTH6 ATLFNR1 ATDI8 MSP-1 ATHB53 ABA1 ATBT4 RBCL
GO:0044699 single-organism process	BP	5.370e-41	AT1G01260 PIP1;3 ATKEA1 SEC1A FBI1 AtLEA3 AtD27 MCCA PSAD-2 A single copy gene that encodes a protein with sequence similarity to tomato E8 (ACC oxidase, the last step in ethylene biosynthesis) involved in ethylene synthesis and fruit ripening in tomato. This gene is not induced by ethylene in siliques. The transcript is found in siliques, etiolated seedlings, leaves, stems and flowers. AT1G03520 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT-PHH1 ATKAO1 ATGLR3.4 HDG2 BT3 ARI5 ATNTH2 BBX24 ACD31.2 HPD AT1G06645 OE23 ATF2KP AT1G07280 ATSMO1 PSAO AVDE1 ACHT4 THA1 AtMYB60 AMI1 CRB FHY2 ATBCAT-1 ATBCAT-2 ATMPK1 ATGSTU18 AT1G10585 GWD Encodes a putative pectin methylesterase/invertase inhibitor. Anti-sense reduction of this gene's transcript results in pollen tube growth retardation and then partial male sterility and reduced seed set. ATSTP1 ATCXXS1 ATBETAFRUCT4 ATCCS AT1G12730 ATUGE1 ICE2 GAPA-2 DVL4 Encodes protein phosphatase 2A (PP2A) B'theta subunit. Targeted to peroxisomes. Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 PKS2 SBH2 RHA2A CP24 AT1G15970 NDF1 ATSYP51 ABA3 HCF173 AT1G16840 ICR1 AT1G18270 TRM3 NDF6 LHCA2*1 AT1G19660 ATCLH1 BEL10 ATLFNR2 ATEXP11 AtCOR47 ASG5 HMG HMGB3 AT1G21010 GLTP2 AT1G21400 AT1G21670 AT1G21680 AT1G21730 BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B. UREF AT1G22430 AT1G22570 AT1G22630 ATMYB3 ATRABG3B FB AOAT1 MENG ATVTI12 AT1G26930 AHK3 SPL11 SPL10 AT1G27520 CYCT1;3 ABCB14 AtRLP4 ATVOZ1 COR413-TM1 AML5 AT1G29700 PSAK AAE14 ATPUP4 ATSRX PSAF ACBP AT1G31920 PRK AtLrgB AT1G32160 LOL1 ATMYC2 AT1G33050 AT1G33110 AT1G33270 AT1G33700 AT1G33811 OHP2 AT5P1 APRL4 AT1G35420 ATGLR3.3 GAPB AtcFBP ATCAO Lhca5 ATUSPL1 AT1G49500 ABF1 FTSH1 NTMC2T5.1 ATERF3 AT1G51110 LYK3 AT1G52220 PSAH-2 ATROPGEF11 ANAC019 AT1G53400 MSL4 ATMPK18 MAP3KA ATMSRB1 GLIP5 ESP ALDH7B4 AT-RSH3 ABCD2 AT1G54500 AtTLP18.3 PSAG UKL3 AT1G55960 AT1G56210 ATDI19 AT1G56500 AT1G57770 CAT2 ATBCA6 MSL3 AtHEMA1 RXW8 AT1G60010 AtNIK3 ATFD2 LHCA3 ATG8C AT1G62250 HT1 AT1G62510 AT1G62660 UGE3 DAA1 UBC28 AT1G64370 AT1G64500 TUA1 RPOD1 AT1G65230 PTAC4 BGLU21 AT1G66330 AT1G66540 AT1G66760 GDPDL2 ABA4 AT1G67700 CSK AT1G67870 ATHPR1 ATTPS6 ADO3 BBX14 AT1G68570 STN7 ACR4 ARC12 ANAC029 AT-EXP1 AIT1 ATCYCD1;1 ATTPS8 KUP6 AOAT2 ABCB26 JAZ9 CRR23 AT1G70820 ATMYBL2 AtGDPD4 AT1G71480 AT1G71500 AT1G71710 PATL1 AT1G73655 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. AT1G73750 BBX16 AT1G73920 AtRLP14 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G74730 ATCPK30 JAZ2 JAC1 ATBBD1 BLH3 AT1G75460 GASA1 ATCLV1 AT1G76110 ATL8 AT1G76450 AtHMGR1 AT1G76530 AT1G76570 ATSKP2;2 AGL27 AT1G77090 AtSTP14 TAPX GNR1 RAP2.4 AUF1 AT1G78560 BBX22 AT1G78995 PSBR ECT8 ALDH5F1 WRI4 AtLa2 AT1G80180 ATXRCC1 AT1G80780 APG2 AtGABP AT2G01460 CRR3 ATMAP65-6 AT2G02570 PLP PKS1 AT2G03310 AT2G03390 ATNRP1 XERICO AT2G04690 AT2G04700 PGR5 AGT ALDH6B2 AT2G14910 AT2G15020 LTP AtRLP19 MEE14 ATCOR413-PM1 ATSERAT3;1 AT2G17650 MCA2 ATMPK7 HBI1 ATTPS11 ADO2 ABX45 AT2G19650 MIOX2 AtOZF1 PSAE-2 ATGLK1 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AT2G21530 ATGRP7 ATCAD3 AT2G21960 AtRIBA2 AGL22 SDG23 SQE2 AtGRF1 ATPSK2 SCPL8 AT2G24240 AT2G24280 AHA5 ATGPX1 EBF1 ELF3 PDF1.2b AtGLDP2 AR781 PLA AT2G26800 CIPK3 AT2G27290 AT2G27500 ALB3 ATOEP16-1 CXIP4 CYP707A2 AT2G29300 AT103-1A PY ANTR1 ABCG31 MAPKKK14 ETC2 TCL2 AT2G30600 AT2G31040 ATERF15 GLX2-5 BBX25 ATGPX2 AT2G31800 AT2G31810 CVL1 AT2G32090 BAM6 ATGLR3.5 ATKAO2 ACK2 AtCLO3 ATCPL3 atnudt22 AT2G34060 AT2G34310 AT2G35050 KUP11 AT2G35260 SAMTL EDA12 AT2G36220 BE3 AtGRF3 AT2G36410 ATPROT3 AT2G37130 PIP2;2 AT2G37585 FHY1 AT2G37840 AT2G37950 CAC3 ATLMCO4 AtAUX1 PDX1L4 ATPDX1.1 AT2G38240 AT2G38330 ATIREG1 AT2G38800 SNZ ATMTP11 PnsL1 DVL11 RCA ATP5CS ELF4 ATFER4 Encodes a putative amino acid transporter. ATEXP8 AT2G41060 ACA4 AT2G41705 AtSPL9 AT2G42220 FBH4 COR15B COR15 TTL3 ATPPC2 MAX2 AML2 AtPIF4 AT2G43280 ATINT1 ETFQO AT2G43560 ATSAGT1 AT2G44920 ATHAM1 ATATG8E AFO CYP76C1 AGL20 AT2G45850 ATHH2 ATI1 ATMPK12 ATBAG6 AT2G46320 AT2G46690 ROPGAP3 APRR9 PSAP AtGolS1 UPB1 AT2G47880 AT2G47890 AT2G48020 AT3G01060 AT3G01310 ATCYP38 ATBCA1 ATPPT2 AT3G01690 ATCOL2 RAD23-3 ATF1 AT3G03870 AT3G03990 AT3G04000 ATGID1A AT3G05160 AIF1 RCI2A AT3G05990 AT3G06130 AT3G06440 ATPDHK A/N-InvC ATSFR2 AT3G07310 MAP3KE2 ATPLC2 LHCB4.2 AT3G09160 ATMT-1 ATRAB8E PIP5K9 AT3G10020 AT3G10060 AtLCY PAL4 AT3G10405 ARAF DREB2 ANT1 FAD2 AT3G12320 AT3G12710 AT3G13040 SRF4 DIN4 BGAL1 AtGRF5 ATNCED3 CYP72A13 CYP72A15 HEME1 ATMT3 ATHM4 ANAC055 AT3G15570 UVR3 ROD1 PIFI ADS3 MFP1 AT3G16120 AQP1 NDF4 TCTP ATEBP ARR1 HCF107 ATCRSH CIPK1 AT3G17640 JAI3 DAC AT3G18050 AT3G18500 AT3G19030 ABF4 ATPEN2 AT3G19480 PUT5 AT3G19850 bHLH121 TTN9 ABCG15 AT3G21360 AT3G21390 AT3G21670 ATSGP2 CYCP2;1 ATWNK2 AT3G22440 AT3G23480 AT3G23700 AtCHUP1 ATB' CYP71B20 CYP71B3 AT3G26240 CYP71B4 CYP71B26 CYP71B35 AT3G26580 GAPA CCL DRB3 LHCB2 DEG1 AT3G28220 CYP81D11 AT3G28770 AT3G29410 AFP3 AT-POX AT3G43220 ACD1 ATIVD TET3 JK224 AT3G45900 H2B ADF2 AT3G46370 PTAC16 ATPHS2 AT3G47070 ASN1 PEX11B CAB4 AT3G47800 AT3G48200 CYP71A24 ATBT2 AT3G48420 AT3G48900 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. iqd21 ARLA1C KICP-02 SNRK2-2 AtIDD2 AT3G50790 AT3G51150 ATSSL4 AT3G51510 AT3G51730 AT3G51760 ACX4 BGAL2 NAKR3 SIG3 ATPTR1 LHCA1 ABCG19 PPL1 P5CS2 ATDFD SBPASE ATJRG21 AT3G56300 PPD6 ARR9 AT3G57170 ATVLN3 AtSIP2 AT3G57680 AtSPP1 AT3G58640 MGT6 ATPIRIN1 AT3G59780 AT3G59940 AT3G60290 AT3G60300 (AT)VAP ATHAM2 AT3G60690 AT3G61010 AT3G61080 ATPIP1 AtSLD1 ATPOB1 AT3G62190 ARFA1E CP12 AT3G62930 AT3G62950 AtTIR1 CSP41A OEP6 AT3G63240 UNE10 AHDP AT4G01130 AGY1 GATL6 PETC ATRMA1 AtRbcX1 AT4G04340 ATPC1 ABC1 ATMSRB6 ATKEA3 AT4G05070 AT4G05090 AT4G05150 PSBQ UBI10 ATPUP13 ATCRY1 APX4 LHCB5 AT4G11570 ATGPX6 PLDGAMMA2 PLDGAMMA3 AT4G11900 CYP706A5 CYP706A6 PSAL AT4G12980 NYC1 ATHAK5 AT4G13550 AtRLP47 J20 ACD6 AT4G15260 CYP74B2 AT4G15545 AtCLA1 AT4G15610 ATVAMP724 AT4G16190 FCA ATINT4 AT4G16490 AT4G16670 AT4G16680 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AtBAM3 DELTA-TIP2 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. ATSYP23 AT4G17810 ATWRKY28 ATPUP10 ATSS4 AT4G18810 CCD4 ATPP2-A1 AT4G19860 ATPCAP1 ATM4 Encodes a Protease inhibitor/seed storage/LTP family protein ORP2A PGR5-LIKE ATNYE1 AGL19 AT4G22990 AT4G23050 PIP1;5 AT4G23730 CRR31 NLP7 ATTRE1 TPD1 CHLM ACD1-LIKE PSD3 ABI1 BGAL12 CGA1 AtFBA7 AtFBA5 AT4G26555 ATFIM1 AT4G26860 PORB AT4G27450 AT4G27700 PPH1 CRF4 AT4G28080 AtPHR1 PSAE-1 AtVPS15 MERI-5 AT4G31050 ENP AT4G31860 AT4G32340 ATSDX1 GAMMA-VPE ATH1 ATCBL10 AtGLDP1 LKR FAB1A ATHDA14 AT4G33550 EX1 ABF3 KCS16 CLB6 AT4G34920 AT4G34950 ADF9 AtMYB32 HCF244 ATSEN1 AT4G35810 atbzip14 AT4G36530 BEE2 AtPLT6 AtGBF1 ATMES9 MEE59 CYP81D4 KAI2 COP3 BT5 NDH-M SHM1 ATCAD8 STY46 AT4G38690 RD19 SHL1 AT4G39270 AT4G39970 AT5G01020 LAX1 AT5G01260 AIRP2 LHCB4.1 ATFER1 AT5G01750 ATCIPK14 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. AT5G01990 AT5G02160 AT5G02180 CDL1 APRR7 LCL1 AT5G02940 UBQ3 AT5G03880 FD-GOGAT PKS4 ATSYTC ATLDA AT5G05200 AT5G05600 CBB3 AT5G05800 ABCG22 WCRKC1 ATPGIP2 AML4 AT5G08050 TCP17 FTRA2 AT5G08415 AT5G08430 NDC1 PMDH2 14-3-3lambda CYP81K2 AT5G10650 CBSX3 CIPK5 KNAT4 AT5G11840 AT5G12270 ANAC083 ABAR ATPDAT CCS52B CARAB-AK-LYS ROXY2 AT5G14120 MPL1 AT5G14210 AT5G14390 AT5G14410 BETA FDH AT5G14880 AT5G14970 GASA4 ATMIXTA ATCNGC2 AT5G16240 ATF2 AtMYB43 ENH1 RVE1 ER-ANT1 AT5G17670 AT5G18525 AT5G18590 AT5G18600 AT5G18640 NSH3 MPK16 ATIPT5 ADG2 ACL5 AT5G19940 AT5G19970 DIN10 PHT4;5 CHR42 WAV2 ATGER3 AT5G20810 AKINBETA1 ATHMA8 A/N-InvE ATSIG5 AT5G24155 PGL5 APRR5 ATTTG1 ATBZIP9 ATCOL4 EBF2 AT5G25770 BGLU37 AtTGG1 AT5G26200 ATIREG3 AT5G27290 ATGID1C SFP2 AT5G27920 AT5G27950 GME AT5G35170 G6PD1 AT5G35970 CAT3 RBCS2B AT5G38520 APE1 AT5G39590 BHLH136 AtRLP54 AT5G40450 AT5G40500 ATCLC-A BEL1 ATUBC8 AT5G42250 encodes a protein whose sequence is similar to ACC oxidase TZP ATAUX2-11 NDH18 AT5G43870 AT5G44020 ATGLK2 AT5G44410 TAO1 AT5G44520 SUV2 ATFKBP13 CIPK20 ATDOG1 APE2 LON2 AT5G47330 AMK2 DIR1 HINT3 ATBXL1 ATFRO6 ATFRO7 RUS6 ATFRO8 CAA33 At-NEET Encodes a putative sorbitol dehydrogenase that can be thiolated in vitro. CRR1 PYL8 CLPX AT5G53360 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G53500 AT5G53900 AtHGO PORA ATM2 BBX29 PDC2 FIP2 ATCBL2 GATA21 BGAL4 ABI2 ACA8 ORP4C AHA3 ADO1 CIPK21 ATCOL5 XBAT32 SKIP1 APO2 NdhN WNK4 COPT1 AT5G59250 LTP3 ATEXO70H7 APRR3 ATPDX2 ATMYB34 PIF7 APRR1 EMB2728 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. APC1 AT5G62350 CDF1 AT5G63080 BT1 AT5G63190 CYP94B1 NF-YC4 AT5G63620 SHA1 BGAL6 PSAN AT5G64110 AT5G64250 ATOPT4 AT5G64460 AT5G64500 CLEL AGL31 AGL70 ATRLP57 AT5G65840 STR16 ATLFNR1 MSP-1 ATHB53 ABA1 CYCD3;2 ASL39 ATBT4 RBCL
GO:0051186 cofactor metabolic process	BP	4.755e-40	PIP1;3 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase HPD PSAO AVDE1 CRB ATGSTU18 PnsL2 NDF1 AT1G16840 AT1G18270 NDF6 LHCA2*1 ATCLH1 ATLFNR2 AT1G22630 MENG AHK3 AAE14 PRK GAPB ATCAO FTSH1 AT1G51110 ALDH7B4 AtTLP18.3 PSAG AtHEMA1 AT1G62250 AT1G65230 AT1G67700 STN7 ABCB26 CRR23 AT1G71480 AT1G73750 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G76450 AtHMGR1 AT1G76570 AT1G77090 BBX22 ALDH6B2 AT2G14910 AtOZF1 ATGLK1 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AT2G21530 AT2G21960 SCPL8 PY CAC3 PDX1L4 ATPDX1.1 AT2G38800 AT2G43560 AT2G43760 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 AT3G13040 HEME1 ATHM4 ADS3 MFP1 NDF4 ARR1 DAC PUT5 AT3G23700 AT3G26580 DEG1 ACD1 AT3G45900 PTAC16 PEX11B AT3G48200 AT3G48420 ATPTR1 PPL1 ATDFD SBPASE AT3G57680 AT3G59780 AT3G61080 CSP41A PETC ATPC1 APX4 AT4G11570 NYC1 J20 AtCLA1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. PGR5-LIKE ATNYE1 CHLM CGA1 AtFBA7 AtFBA5 AT4G26860 PORB AT4G27700 AT4G31050 ATSDX1 ATH1 AtGLDP1 ATHDA14 AIRP2 ATLDA AT5G05200 AT5G08050 FTRA2 AT5G08415 PMDH2 AT5G11840 ABAR AT5G14970 ENH1 ADG2 PGL5 G6PD1 AT5G35970 ATGLK2 AT5G44520 ATFKBP13 At-NEET CLPX thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO PORA GATA21 NdhN PSAN ATLFNR1
GO:1901564 organonitrogen compound metabolic proces...	BP	1.642e-37	MCCA encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase HPD OE23 ATSMO1 PSAO AVDE1 THA1 AMI1 CRB ATBCAT-1 ATBCAT-2 ATGSTU18 PnsL2 SBH2 CP24 NDF1 AT1G16840 AT1G18270 NDF6 LHCA2*1 ATCLH1 ATLFNR2 AT1G22630 AOAT1 AHK3 PSAK PSAF ACBP PRK ATMYC2 AT1G33110 AT1G33700 AT1G35420 GAPB ATCAO AT1G49500 FTSH1 NTMC2T5.1 AT1G51110 PSAH-2 ALDH7B4 AT-RSH3 AtTLP18.3 PSAG AtHEMA1 LHCA3 AT1G62250 AT1G62660 AT1G65230 AT1G67700 ATHPR1 STN7 ACR4 AOAT2 ABCB26 CRR23 AT1G71480 AT1G73750 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. GASA1 AT1G76450 AtHMGR1 AT1G76570 AT1G77090 BBX22 PSBR ALDH5F1 ALDH6B2 AT2G14910 ATSERAT3;1 AtOZF1 ATGLK1 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AT2G21530 AT2G21960 AtRIBA2 SCPL8 AHA5 AtGLDP2 AT2G26800 PY AT2G31810 PDX1L4 ATPDX1.1 AT2G38800 PnsL1 ATP5CS ACA4 AT2G41705 AT2G42220 ETFQO AT2G43560 AT2G43760 ATSAGT1 AT2G44920 PSAP ATCYP38 ATBCA1 AT3G01690 ATF1 AT3G04000 LHCB4.2 ATRAB8E PIP5K9 PAL4 AT3G13040 HEME1 ATHM4 ROD1 ADS3 MFP1 NDF4 ARR1 ATCRSH DAC AT3G19030 AT3G19480 PUT5 AT3G23700 AT3G26580 DEG1 AT-POX ACD1 ATIVD AT3G45900 PTAC16 ASN1 PEX11B CAB4 AT3G48200 AT3G48420 ATSSL4 ATPTR1 PPL1 P5CS2 ATDFD SBPASE AT3G56300 AT3G57020 AT3G57680 AtSPP1 AT3G59780 AT3G61080 CSP41A PETC ATPC1 APX4 LHCB5 AT4G11570 PLDGAMMA2 PLDGAMMA3 NYC1 J20 AT4G15260 CYP74B2 AtCLA1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. PGR5-LIKE ATNYE1 CHLM CGA1 AtFBA7 AtFBA5 PORB AT4G27700 PSAE-1 ATSDX1 ATH1 AtGLDP1 LKR ATHDA14 AT4G35810 AtPLT6 SHM1 AT5G01020 AIRP2 AT5G01750 ATLDA AT5G05200 AT5G08050 AT5G08430 PMDH2 AT5G11840 ABAR CARAB-AK-LYS AT5G14120 AT5G14970 GASA4 ENH1 NSH3 ATIPT5 ADG2 AT5G19940 ATHMA8 PGL5 AT5G25770 G6PD1 AT5G35970 CAT3 AT5G44020 ATGLK2 AT5G44520 ATFKBP13 APE2 HINT3 At-NEET CRR1 CLPX thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO PORA GATA21 ACA8 AHA3 XBAT32 APO2 NdhN ATPDX2 ATMYB34 PSAN AT5G64250 AT5G64500 STR16 ATLFNR1 MSP-1
GO:0044281 small molecule metabolic process	BP	4.080e-35	AT1G01260 PIP1;3 MCCA ATKAO1 ARI5 BBX24 HPD OE23 ATSMO1 PSAO AVDE1 ACHT4 THA1 AMI1 CRB ATBCAT-1 ATBCAT-2 ATMPK1 ATGSTU18 ATCXXS1 GAPA-2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 SBH2 CP24 NDF1 ABA3 AT1G18270 NDF6 LHCA2*1 ATLFNR2 AtCOR47 HMG AT1G21670 AT1G21680 BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B. AT1G22630 ATMYB3 AOAT1 MENG AHK3 AML5 AT1G29700 PSAK AAE14 PSAF ACBP PRK ATMYC2 AT1G33110 AT5P1 AT1G35420 GAPB ATCAO AT1G49500 FTSH1 NTMC2T5.1 AT1G51110 PSAH-2 ESP AT-RSH3 ABCD2 AtTLP18.3 PSAG AT1G55960 AT1G56500 CAT2 MSL3 LHCA3 AT1G62660 UBC28 AT1G65230 AT1G66330 AT1G66760 GDPDL2 ABA4 AT1G67700 ATHPR1 ACR4 AOAT2 JAZ9 CRR23 AT1G70820 AtGDPD4 AT1G71710 PATL1 AT1G73920 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. JAZ2 GASA1 AT1G76450 AtHMGR1 AT1G76570 AT1G77090 GNR1 PSBR ALDH5F1 WRI4 XERICO AT2G15020 ATSERAT3;1 AT2G17650 MIOX2 AT2G21530 ATGRP7 AT2G21960 AtRIBA2 SQE2 SCPL8 AT2G24280 AHA5 AtGLDP2 PLA AT2G26800 CYP707A2 AT2G29300 AT103-1A PY ANTR1 GLX2-5 BBX25 AT2G31810 CVL1 ATKAO2 AtCLO3 atnudt22 AT2G34310 AT2G35260 CAC3 ATPDX1.1 ATMTP11 PnsL1 DVL11 RCA ATP5CS ACA4 AT2G41705 AT2G42220 ATPPC2 ETFQO AT2G43560 ATSAGT1 AT2G44920 ATHH2 PSAP AT3G01060 ATCYP38 ATBCA1 AT3G01690 ATF1 AT3G04000 RCI2A ATSFR2 LHCB4.2 ATRAB8E PIP5K9 PAL4 AT3G12320 ATNCED3 HEME1 ATHM4 ANAC055 ROD1 ADS3 MFP1 NDF4 ARR1 ATCRSH JAI3 DAC AT3G19030 AT3G19480 bHLH121 ABCG15 AT3G22440 AT3G23700 GAPA DEG1 AT-POX AT3G43220 ATIVD PTAC16 ASN1 PEX11B CAB4 AT3G48200 AT3G48420 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. SNRK2-2 AT3G51730 ACX4 PPL1 P5CS2 ATDFD SBPASE AT3G56300 AT3G59780 ATPIP1 AtSLD1 CSP41A AT3G63240 PETC ATPC1 APX4 LHCB5 PLDGAMMA2 PLDGAMMA3 AT4G15260 CYP74B2 AtCLA1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. PGR5-LIKE PIP1;5 NLP7 CHLM AtFBA7 AtFBA5 AT4G26860 PORB AT4G27700 AT4G28080 PSAE-1 AtVPS15 AT4G31050 ATSDX1 ATH1 AtGLDP1 LKR ATHDA14 KCS16 CLB6 AT4G34950 HCF244 AT4G35810 AtPLT6 ATMES9 SHM1 RD19 SHL1 AT4G39970 AT5G01020 AT5G01260 AT5G01750 FD-GOGAT ATSYTC ATLDA AT5G05600 CBB3 WCRKC1 ATPGIP2 AT5G08050 FTRA2 AT5G08415 AT5G08430 PMDH2 14-3-3lambda CBSX3 CARAB-AK-LYS AT5G14120 MPL1 BETA GASA4 AT5G16240 ATF2 ENH1 AT5G18600 NSH3 ADG2 AT5G19940 ATHMA8 ATSIG5 AT5G24155 PGL5 AT5G25770 BGLU37 AtTGG1 GME AT5G35170 G6PD1 CAT3 AT5G38520 NDH18 AT5G44020 AT5G44520 ATFKBP13 APE2 AMK2 HINT3 ATFRO8 At-NEET CRR1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO ACA8 AHA3 ADO1 XBAT32 APO2 NdhN ATPDX2 ATMYB34 AT5G62350 CYP94B1 PSAN AT5G64250 AT5G64500 STR16 ATLFNR1 MSP-1 ABA1
GO:0001101 response to acid chemical	BP	2.721e-34	AT1G01260 PIP1;3 FBI1 AT-PHH1 ATGLR3.4 BT3 BBX24 ATMYB13 OE23 AtMYB60 CRB ATMPK1 AT1G11210 ATBETAFRUCT4 RHA2A ABA3 TRM3 AtMYB47 ATCLH1 ATLFNR2 AtCOR47 ASG5 ATMYB3 AHK3 COR413-TM1 PRK ATMYC2 ATGLR3.3 AtcFBP AT1G49010 ABF1 ATERF3 ABCG12 ANAC019 ESP ALDH7B4 ATDI19 MSL3 AT1G62660 AT1G66760 ATHPR1 BBX14 AT-EXP1 AtCLO4 JAZ9 AT1G70820 ATMYBL2 AT1G73480 AT1G73980 ATCPK30 JAZ2 AT1G75460 GASA1 AT1G76110 RAP2.4 BBX22 ATNRP1 XERICO PGR5 AtRLP19 ATCOR413-PM1 AT2G17650 HIS1-3 ABX45 ATGLK1 AT2G21130 ATGRP7 AGL22 AtGRF1 AT2G23840 ELF3 AR781 PLA CIPK3 AT2G27500 ATOEP16-1 AT103-1A ANTR1 MAPKKK14 AtCLO3 ATCPL3 PIP2;2 RCA ATP5CS ATHSPRO2 COR15B COR15 MAX2 AtPIF4 ATSAGT1 AFO AGL20 ATHH2 ATMPK12 PSAP AtGolS1 ATCYP38 ATBCA1 ATGID1A AT3G05640 AIF1 RCI2A AT3G07310 AT3G10060 DREB2 AT3G12320 AtGRF5 ATNCED3 ANAC055 TCTP ATEBP CIPK1 JAI3 AT3G18050 ABF4 LHCB2 AFP3 AT-POX ATMYB48 ATPHS2 ATBT2 SNRK2-2 AtIDD2 P5CS2 SBPASE ARR9 AtSPP1 ATPIRIN1 AT3G60690 ATPIP1 ATHB-12 PETC DFL2 AtRbcX1 UBI10 ATCRY1 ACD6 AT4G15610 DELTA-TIP2 ATPCAP1 ATM4 IQD22 NLP7 ATCBF3 ABI1 CGA1 AT4G27450 AT4G28080 AtVPS15 MERI-5 AT4G31860 ABF3 AtMYB32 ATSEN1 UBC17 BEE2 BT5 RD19 LCL1 DREB2 AT5G05600 ABCG22 ATPGIP2 PMDH2 ANAC083 AT5G14120 BETA AT5G14920 GASA4 ATMIXTA AtCor6.6 AtMYB43 RVE1 NSH3 AT5G19970 ATCOL4 BGLU37 AtTGG1 ATGID1C AtRLP54 ATCLC-A BEL1 ATGLK2 LCR77 CIPK20 ATDOG1 DIR1 AT5G52660 PYL8 ATCBL2 GATA21 ABI2 ATCOL5 WNK4 LTP3 ATMYB59 ATMYB34 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. BT1 CYP94B1 NF-YC4 SHA1 XTH6 ATLFNR1 ATDI8 MSP-1 ABA1 ATBT4 RBCL
GO:0044710 single-organism metabolic process	BP	6.156e-34	AT1G01260 PIP1;3 AtD27 MCCA A single copy gene that encodes a protein with sequence similarity to tomato E8 (ACC oxidase, the last step in ethylene biosynthesis) involved in ethylene synthesis and fruit ripening in tomato. This gene is not induced by ethylene in siliques. The transcript is found in siliques, etiolated seedlings, leaves, stems and flowers. AT1G03520 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT-PHH1 ATKAO1 ARI5 ATNTH2 BBX24 ACD31.2 HPD AT1G06645 OE23 ATF2KP AT1G07280 ATSMO1 PSAO AVDE1 ACHT4 THA1 AMI1 CRB ATBCAT-1 ATBCAT-2 ATMPK1 ATGSTU18 GWD ATCXXS1 ATCCS AT1G12730 ATUGE1 GAPA-2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 SBH2 CP24 AT1G15970 NDF1 ABA3 AT1G16840 AT1G18270 NDF6 LHCA2*1 AT1G19660 ATCLH1 ATLFNR2 AtCOR47 HMG HMGB3 AT1G21670 AT1G21680 BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B. UREF AT1G22430 AT1G22630 ATMYB3 AOAT1 MENG AHK3 AT1G27520 AML5 AT1G29700 PSAK AAE14 ATSRX PSAF ACBP PRK LOL1 ATMYC2 AT1G33050 AT1G33110 AT1G33270 AT1G33700 AT1G33811 AT5P1 AT1G35420 GAPB AtcFBP ATCAO AT1G49500 FTSH1 NTMC2T5.1 AT1G51110 PSAH-2 MAP3KA ATMSRB1 GLIP5 ESP ALDH7B4 AT-RSH3 ABCD2 AT1G54500 AtTLP18.3 PSAG UKL3 AT1G55960 AT1G56210 AT1G56500 AT1G57770 CAT2 MSL3 AtHEMA1 RXW8 ATFD2 LHCA3 ATG8C AT1G62250 AT1G62660 UGE3 UBC28 TUA1 AT1G65230 BGLU21 AT1G66330 AT1G66540 AT1G66760 GDPDL2 ABA4 AT1G67700 ATHPR1 ATTPS6 BBX14 STN7 ACR4 ATCYCD1;1 ATTPS8 AOAT2 ABCB26 JAZ9 CRR23 AT1G70820 ATMYBL2 AtGDPD4 AT1G71480 AT1G71500 AT1G71710 PATL1 AT1G73655 AT1G73750 AT1G73920 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. JAZ2 ATBBD1 AT1G75460 GASA1 AT1G76110 AT1G76450 AtHMGR1 AT1G76570 AT1G77090 GNR1 BBX22 PSBR ECT8 ALDH5F1 WRI4 ATXRCC1 APG2 AT2G01460 CRR3 AT2G02570 PLP AT2G03310 AT2G03390 XERICO AT2G04690 AT2G04700 PGR5 ALDH6B2 AT2G14910 AT2G15020 AtRLP19 ATSERAT3;1 AT2G17650 ATTPS11 ABX45 AT2G19650 MIOX2 AtOZF1 ATGLK1 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AT2G21530 ATGRP7 ATCAD3 AT2G21960 AtRIBA2 AGL22 SDG23 SQE2 SCPL8 AT2G24280 AHA5 ATGPX1 AtGLDP2 PLA AT2G26800 AT2G27290 ALB3 CYP707A2 AT2G29300 AT103-1A PY ANTR1 AT2G31040 GLX2-5 BBX25 ATGPX2 AT2G31810 CVL1 AT2G32090 BAM6 ATKAO2 ACK2 AtCLO3 atnudt22 AT2G34060 AT2G34310 AT2G35050 AT2G35260 AT2G36220 BE3 AT2G37130 AT2G37585 AT2G37840 CAC3 ATLMCO4 AtAUX1 PDX1L4 ATPDX1.1 AT2G38240 AT2G38800 ATMTP11 PnsL1 DVL11 RCA ATP5CS ATFER4 Encodes a putative amino acid transporter. ACA4 AT2G41705 AT2G42220 COR15 ATPPC2 AtPIF4 AT2G43280 ETFQO AT2G43560 ATSAGT1 AT2G44920 CYP76C1 ATHH2 PSAP AtGolS1 AT2G47890 AT3G01060 AT3G01310 ATCYP38 ATBCA1 ATPPT2 AT3G01690 RAD23-3 ATF1 AT3G03870 AT3G03990 AT3G04000 ATGID1A AIF1 RCI2A AT3G06440 ATSFR2 ATPLC2 LHCB4.2 ATRAB8E PIP5K9 AT3G10020 AtLCY PAL4 ARAF FAD2 AT3G12320 AT3G12710 AT3G13040 BGAL1 AtGRF5 ATNCED3 CYP72A13 CYP72A15 HEME1 ATHM4 ANAC055 AT3G15570 UVR3 ROD1 PIFI ADS3 MFP1 NDF4 ARR1 HCF107 ATCRSH JAI3 DAC AT3G18500 AT3G19030 ATPEN2 AT3G19480 PUT5 bHLH121 ABCG15 AT3G21360 AT3G22440 AT3G23480 AT3G23700 AtCHUP1 CYP71B20 CYP71B3 AT3G26240 CYP71B4 CYP71B26 CYP71B35 AT3G26580 GAPA DRB3 DEG1 AT3G28220 CYP81D11 AT-POX AT3G43220 ACD1 ATIVD AT3G45900 PTAC16 ATPHS2 ASN1 PEX11B CAB4 AT3G47800 AT3G48200 CYP71A24 AT3G48420 AT3G48900 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. ARLA1C SNRK2-2 AtIDD2 AT3G51510 AT3G51730 ACX4 BGAL2 SIG3 ATPTR1 PPL1 P5CS2 ATDFD SBPASE ATJRG21 AT3G56300 AT3G57170 ATVLN3 AtSIP2 AT3G57680 AtSPP1 AT3G58640 AT3G59780 AT3G60290 AT3G61010 AT3G61080 ATPIP1 AtSLD1 CP12 CSP41A OEP6 AT3G63240 AT4G01130 GATL6 PETC AtRbcX1 AT4G04340 ATPC1 ATMSRB6 AT4G05070 AT4G05090 ATCRY1 APX4 LHCB5 AT4G11570 ATGPX6 PLDGAMMA2 PLDGAMMA3 CYP706A5 CYP706A6 NYC1 AT4G13550 J20 AT4G15260 CYP74B2 AT4G15545 AtCLA1 AT4G15610 AT4G16190 AtBAM3 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. ATWRKY28 ATSS4 CCD4 AT4G19860 ORP2A PGR5-LIKE ATNYE1 PIP1;5 AT4G23730 NLP7 ATTRE1 CHLM ACD1-LIKE PSD3 ABI1 BGAL12 CGA1 AtFBA7 AtFBA5 AT4G26555 AT4G26860 PORB AT4G27700 PPH1 AT4G28080 PSAE-1 AtVPS15 AT4G31050 AT4G31860 ATSDX1 ATH1 ATCBL10 AtGLDP1 LKR FAB1A ATHDA14 KCS16 CLB6 AT4G34920 AT4G34950 HCF244 AT4G35810 AT4G36530 AtPLT6 ATMES9 CYP81D4 NDH-M SHM1 ATCAD8 AT4G38690 RD19 SHL1 AT4G39970 AT5G01020 AT5G01260 AIRP2 ATFER1 AT5G01750 AT5G02940 FD-GOGAT ATSYTC ATLDA AT5G05200 AT5G05600 CBB3 WCRKC1 ATPGIP2 AT5G08050 FTRA2 AT5G08415 AT5G08430 NDC1 PMDH2 14-3-3lambda CYP81K2 CBSX3 AT5G11840 AT5G12270 ABAR ATPDAT CCS52B CARAB-AK-LYS AT5G14120 MPL1 AT5G14410 BETA FDH AT5G14970 GASA4 AT5G16240 ATF2 AtMYB43 ENH1 AT5G17670 AT5G18525 AT5G18600 AT5G18640 NSH3 ATIPT5 ADG2 ACL5 AT5G19940 CHR42 ATHMA8 A/N-InvE ATSIG5 AT5G24155 PGL5 ATCOL4 AT5G25770 BGLU37 AtTGG1 ATGID1C AT5G27920 GME AT5G35170 G6PD1 AT5G35970 CAT3 RBCS2B AT5G38520 APE1 AtRLP54 AT5G40500 ATUBC8 AT5G42250 encodes a protein whose sequence is similar to ACC oxidase TZP NDH18 AT5G44020 ATGLK2 AT5G44410 AT5G44520 ATFKBP13 APE2 AMK2 HINT3 ATFRO6 ATFRO7 ATFRO8 At-NEET Encodes a putative sorbitol dehydrogenase that can be thiolated in vitro. CRR1 CLPX thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO PORA PDC2 ATCBL2 GATA21 BGAL4 ABI2 ACA8 ORP4C AHA3 ADO1 XBAT32 APO2 NdhN WNK4 ATPDX2 ATMYB34 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AT5G62350 AT5G63080 CYP94B1 AT5G63620 SHA1 PSAN AT5G64110 AT5G64250 AT5G64500 AT5G65840 STR16 ATLFNR1 MSP-1 ABA1 RBCL
GO:0006796 phosphate-containing compound metabolic ...	BP	1.435e-32	PSAD-2 PSB27 OE23 ATF2KP MAPKKK13 PSAO AVDE1 ATPPCK1 CRB FHY2 ATMPK1 ATGSTU18 GWD ATCXXS1 PEPKR2 AT1G12730 GAPA-2 AT1G13350 PnsL2 PKS2 CP24 NDF1 ABA3 HCF173 AT1G18270 NDF6 LHCA2*1 ATCLH1 ATLFNR2 ASG5 AT1G21590 UREF AT1G22630 AHK3 CYCT1;3 AT1G29700 AT1G29720 ACBP PRK AT1G32160 AT5P1 GAPB AtcFBP AT1G49730 FTSH1 AT1G51110 LYK3 AT1G52220 PSAH-2 ATMPK18 MAP3KA AT-RSH3 AtTLP18.3 AT1G54820 PSAG AT1G55960 AT1G56500 AT1G56720 AtNIK3 ATG8C HT1 AT1G65190 AT1G65230 AT1G66330 GDPDL2 AT1G67700 CSK ATHPR1 BBX14 STN7 ATCYCD1;1 AOAT2 CRR23 AT1G70820 AT1G71710 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. AT1G73980 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATCPK30 AT1G75460 ATCLV1 AT1G76110 AT1G76450 AtHMGR1 AT1G76570 AT1G77090 AT1G77280 BBX22 ATXRCC1 APG2 PLP PKS1 AT2G04690 AT2G15020 AtRLP19 ATMPK7 AtOZF1 ATGLK1 AT2G21530 AT2G21960 AGL22 SCPL8 AHA5 PLA CIPK3 AT2G27290 ALB3 AT2G29300 PY ANTR1 MAPKKK14 AT2G31010 BBX25 AT2G31800 CVL1 AT2G32090 ACK2 AT2G34310 AT2G35050 AT2G35260 AT2G37840 PDX1L4 ATPDX1.1 ATMTP11 RCA Encodes a putative amino acid transporter. AT2G40860 ACA4 COR15 AtPIF4 AT2G43560 AT2G43760 AT2G44920 ATMPK12 PSAP AT3G01060 ATCYP38 AT3G01490 ATBCA1 ATF1 AT3G03870 ATNEK2 ATWNK1 AIF1 ATPDHK MAP3KE2 ATPK1 LHCB4.2 PIP5K9 AT3G12320 SRF4 SPA3 ATHM4 ANAC055 ROD1 ADS3 MFP1 NDF4 HCF107 ATCRSH CIPK1 DAC ATPEN2 AT3G19850 PSBTN CYCP2;1 ATWNK2 AT3G23700 AT3G24715 AtCHUP1 DEG1 AT3G43220 JK224 AT3G46370 PTAC16 PEX11B AT3G48200 AT3G48420 ARLA1C SNRK2-2 AtIDD2 AT3G51370 ATSSL4 AFC1 PPL1 SBPASE AT3G57170 AT3G58640 AT3G59350 AT3G59780 AT3G61160 AT3G62220 CSP41A AT3G63240 AT4G01330 PETC ATPC1 ATKEA3 AT4G05070 AT4G05090 AT4G05150 ATCRY1 APX4 PLDGAMMA2 PLDGAMMA3 AT4G11900 MHK AT4G14480 AT4G15545 AtCLA1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G19860 PGR5-LIKE AT4G23050 CRK21 CRR31 AT4G24480 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) CHLM PSD3 ABI1 AtFBA7 AtFBA5 AT4G26860 AT4G27700 PPH1 AT4G28080 ckl4 AtVPS15 AT4G29990 AT4G31860 ATSDX1 ATH1 AtGLDP1 AT4G33080 FAB1A ATHDA14 CLB6 AT4G34920 HCF244 STY46 AT4G39270 AT5G01020 AT5G01260 ATCIPK14 AT5G03880 ATLDA ATPGIP2 AT5G08050 PMDH2 14-3-3lambda CIPK5 AT5G11410 AT5G14210 AT5G14410 AT5G14720 BETA ENH1 AT5G17670 AT5G18525 MPK16 ADG2 AT5G19940 ATHMA8 AT5G22050 ATSIG5 PGL5 ATCOL4 GME AT5G35170 G6PD1 PP2C74 AT5G38520 AtRLP54 AT5G40500 NDH18 ATGLK2 AT5G44520 ATFKBP13 CIPK20 APE2 AMK2 HINT3 AT5G48790 At-NEET thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. ATCBL2 ABI2 ACA8 AHA3 AT5G57565 CIPK21 APO2 NdhN WNK4 AT5G58950 APRR3 SHA1 PSAN ATLFNR1 MSP-1 ABA1
GO:0044238 primary metabolic process	BP	1.523e-31	AT1G01240 AT1G01260 PIP1;3 AT1G02300 FBI1 AtD27 MCCA PSAD-2 AT1G03520 AT1G03590 PSB27 AT-PHH1 ATKAO1 HDG2 BT3 AT1G05805 ARI5 ATNTH2 BBX24 ATMYB13 FTSH8 ACD31.2 HPD OE23 ATF2KP MAPKKK13 AT1G07280 ATSMO1 PSAO AVDE1 THA1 ATPPCK1 AtMYB60 AMI1 CRB FHY2 ATBCAT-1 ATBCAT-2 ATMPK1 ATGSTU18 AT1G10585 AMSH2 AT1G10610 AT1G10640 GWD ATCXXS1 ATBETAFRUCT4 PEPKR2 AT1G12730 ATUGE1 ICE2 GAPA-2 AT1G13350 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. WRKY4 PnsL2 PKS2 SBH2 RHA2A GLYI4 CP24 AT1G15970 NDF1 ABA3 HCF173 AT1G16960 AT1G18270 EPR1 AtMYB47 NDF6 AT1G19000 LHCA2*1 ATRL5 AT1G19660 ATCLH1 AT1G19680 BEL10 AT1G19740 ATLFNR2 AtCOR47 ASG5 HMG HMGB3 AT1G20810 AT1G21010 AT1G21060 AT1G21590 BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B. UREF AT1G22630 ATMYB3 FB AOAT1 BBX15 AT1G26580 AT1G26665 AHK3 SPL11 SPL10 AT1G27520 CYCT1;3 AT1G28310 ATVOZ1 AML5 AT1G29720 PSAK PSAF AtTRM9 ACBP AT1G31920 PRK AT1G32160 ATMYC2 AT1G33050 AT1G33110 AT1G33270 AT1G33700 AT1G33811 AT5P1 AT1G35420 GAPB AtcFBP ATCAO Lhca5 DYW1 AT1G48100 AT1G49010 BBX17 AT1G49210 AT1G49500 ABF1 AT1G49730 FTSH1 NTMC2T5.1 ATERF3 AT1G51110 LYK3 AT1G52220 PSAH-2 ANAC019 AT1G53400 ATMPK18 MAP3KA ATMSRB1 AT1G53780 GLIP5 AT-RSH3 ABCD2 AT1G54500 AtTLP18.3 AT1G54820 PSAG UKL3 AT1G56210 ATDI19 AT1G56300 AT1G56500 AT1G56720 AT1G57770 CAT2 RXW8 AT1G60010 AT1G60590 AtNIK3 LHCA3 ATG8C AT1G62310 HT1 AT1G62660 UGE3 ATSPPL2 UBC5 UBC28 AT1G64370 AT1G64500 AT1G64680 TUA1 RPOD1 AT1G65190 AT1G65230 ATHEX1 AtMYB20 GDPDL2 ABA4 AT1G67700 CSK AT1G67870 ATHPR1 ATTPS6 ADO3 BBX27 BBX14 AT1G68660 STN7 ACR4 ANAC029 ATCYCD1;1 ATTPS8 AOAT2 CRR23 AT1G70820 AT1G71020 ATMYBL2 AtGDPD4 AT1G71710 PATL1 TRFL6 AT1G73655 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. BBX16 AT1G73920 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATCPK30 ATRL6 ATBBD1 BLH3 AT1G75460 encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. GASA1 ATCLV1 AT1G76110 AT1G76450 AtHMGR1 AT1G76580 AT1G76720 ATSKP2;2 AGL27 AT1G77090 AT1G77280 AT1G77930 RAP2.4 BBX22 AT1G78995 PSBR ECT8 ALDH5F1 WRI4 AtLa2 ATXRCC1 AT1G80780 AtJ8 APG2 At17.1 AT2G01460 ATBPC1 AT2G02570 PLP PKS1 WRKY3 AT2G03390 XERICO AT2G04690 AT2G04700 AtRLP19 AT2G16365 ATSERAT3;1 AT2G17650 AT2G17880 ATMPK7 AtTLP2 HBI1 ATTPS11 ADO2 ABX45 MIOX2 AtOZF1 ATGLK1 AT2G21130 AT2G21530 ATGRP7 AT2G21960 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. ATUBP4 AGL22 SDG23 SQE2 SCPL13 SCPL8 AT2G24280 AHA5 EBF1 ATCTH AtGLDP2 AT2G26500 PLA AT2G26800 CIPK3 AT2G27290 AT2G27500 ALB3 AT2G28810 CYP707A2 AT2G29360 PY MAPKKK14 ETC2 TCL2 PSBW AT2G31010 AT2G31040 ATERF15 BBX25 AT2G31800 AT2G31810 CVL1 AT2G32090 ATOFP16 BAM6 ATKAO2 ACK2 BGLU33 AtCLO3 ATCPL3 atnudt22 AT2G34140 AT2G35050 AT2G35260 BE3 AT2G36630 UMAMIT13 AT2G37585 FHY1 AT2G37840 CAC3 ATLMCO4 AtAUX1 AT2G38300 SNZ PnsL1 DVL11 ATP5CS AT2G40260 Encodes a putative amino acid transporter. AT2G40620 AT2G40860 ACA4 AT2G41705 AtSPL9 AT2G42220 FBH4 COR15 TTL3 ATPPC2 MAX2 HLH1 AtPIF4 AT2G43280 ETFQO AT2G43540 AT2G43560 AT2G43760 ATSAGT1 AT2G44730 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHAM1 AGL20 ATHH2 ATMPK12 ATBAG6 AT2G46250 ARF11 APRR9 AT2G46810 PSAP AtGolS1 UPB1 AT2G47890 ATCYP38 AT3G01490 ATBCA1 AT3G01520 AT3G01690 RAD23-3 ATF1 AT3G03870 AT3G04000 ATNEK2 ATWNK1 ATGID1A AIF1 RCI2A AT3G06440 ATPDHK ATSFR2 MAP3KE2 ATPLC2 ATPK1 LHCB4.2 ATRAB8E PIP5K9 AT3G10060 AtLCY PAL4 CPY ARAF DREB2 FAD2 AT3G12710 AT3G13000 AT3G13040 SRF4 BGAL1 AtGRF5 ATNCED3 AT3G14595 HEME1 ATMT3 SPA3 ATHM4 ANAC055 AT3G15570 UVR3 AT3G15780 ROD1 ADS3 MFP1 AT3G16220 NDF4 ATEBP ARR1 HCF107 ATCRSH CIPK1 DAC AT3G18500 AT3G19030 ABF4 ATPEN2 AT3G19480 AT3G19850 bHLH121 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. JMJ30 PSBTN ABCG15 CYCP2;1 BBX31 ATWNK2 AT3G22440 XBAT35 AT3G23480 AT3G23700 AT3G24715 AtCHUP1 AT3G26085 GAPA DRB3 AT3G27110 LHCB2 DEG1 AT3G28220 AFP3 AT-POX AT3G43220 ACD1 ATIVD JK224 ATMYB48 AT3G46370 LUX PTAC16 ATPHS2 AT3G47070 ASN1 PEX11B CAB4 CDF3 AT3G47800 AT3G48200 CEP3 ATBT2 AT3G48420 ATHAP5A AT3G48900 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. ARLA1C SNRK2-2 AtIDD2 BEH1 AT3G51370 ATSSL4 AT3G51510 AT3G51730 ACX4 ATOFP18 BGAL2 AFC1 SIG3 LHCA1 PPL1 P5CS2 ATDFD SBPASE AT3G56300 ARR9 AT3G57170 ATVLN3 AT3G57470 AtSIP2 AT3G57680 AT3G57800 AT3G58020 AtSPP1 AT3G58640 AT3G59350 AT3G59780 AT3G60340 HAT3 GATA4 (AT)VAP ATHAM2 AtPP2-A13 AT3G61160 ATPIP1 AT3G61490 AtSLD1 ATHB-12 AT3G62190 AT3G62220 ARFA1E CP12 AT3G62650 BGLU8 AtTIR1 CSP41A OEP6 AT3G63240 UNE10 AHDP AT4G01130 AT4G01330 AT4G01460 GATL6 UBQ14 AT4G03250 PETC ATRMA1 AtRbcX1 AT4G04340 AtWRKY42 ATPC1 ATKEA3 AT4G05070 AT4G05090 AT4G05150 PSBQ UBI10 ATCRY1 APX4 CRRJ LHCB5 RHA1B PLDGAMMA2 PLDGAMMA3 AT4G11900 PSAL AT4G12830 scpl20 MHK AT4G13040 NYC1 AT4G13550 J20 AT4G14480 AT4G15260 CYP74B2 AT4G15545 AtCLA1 AT4G16190 FCA encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AtBAM3 AT4G17150 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17810 ATWRKY28 ATSS4 AT4G18740 AT4G18810 ATPP2-A1 AT4G19860 ATPCAP1 ATM4 AT4G21650 DER2.1 ORP2A PGR5-LIKE AGL19 AT4G23050 CRK21 PIP1;5 AT4G23730 AT4G23820 CRR31 ATTRE1 AT4G24480 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) CHLM ATCBF2 ATCBF3 PSD3 ABI1 BGAL12 CGA1 AtFBA7 AtFBA5 AT4G26555 BBX28 PORB AT4G27700 PPH1 BGLU9 CRF4 AT4G28080 AtPHR1 PSAE-1 ckl4 AtC3H49 AtVPS15 AT4G29990 MERI-5 AT4G30690 AT4G31050 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. AT4G31860 AT4G32340 ATSDX1 GAMMA-VPE ATH1 ATCBL10 AtGLDP1 AT4G33080 LKR FAB1A ATHDA14 ABF3 KCS16 CLB6 AT4G34920 AtMYB32 HCF244 AT4G35270 AT4G35810 atbzip14 J11 AT4G36190 AT4G36210 UBC17 AT4G36530 BEE2 AtPLT6 AtGBF1 BT5 SHM1 STY46 AT4G38650 AT4G38690 RD19 SHL1 AT4G39270 FKBP16-2 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT5G01020 AT5G01260 LHCB4.1 AT5G01750 ATCIPK14 AT5G02160 CDL1 APRR7 LCL1 UPL4 AT5G02940 UBQ3 AT5G03880 FD-GOGAT ATSYTC ATLDA AT5G05200 DREB2 CBB3 HAT14 ATPGIP2 AT5G08050 TCP17 FTRA2 AT5G08415 AT5G08430 PMDH2 14-3-3lambda CBSX3 CIPK5 KNAT4 AT5G11410 AT-HSP17.6A ANAC083 ATPDAT CCS52B CARAB-AK-LYS ROXY2 AT5G14120 MPL1 AT5G14210 AT5G14410 AT5G14720 AT5G14970 GASA4 ATMIXTA AT5G16240 AtMYB43 AT5G16650 ENH1 RVE1 AT5G17670 AT5G18140 AT5G18525 AT5G18640 AtTLP11 NSH3 MPK16 ATIPT5 AT5G19120 ADG2 ACL5 AtRbcX2 AT5G19940 CHR42 WAV2 ATGER3 AKINBETA1 ATHMA8 AT5G22050 A/N-InvE AT5G22850 AT5G22860 ATSIG5 AT5G24155 PGL5 APRR5 AT5G24490 ATTTG1 ATBZIP9 ATCOL4 EBF2 AT5G25770 BGLU37 AT5G26622 ATGID1C AT5G27730 AT5G27950 GME AT5G35170 G6PD1 PP2C74 CAT3 AT5G38510 AT5G38520 APE1 AT5G39590 AT5G40060 AtRLP54 AT5G40450 AT5G40500 ATCLC-A BEL1 ATUBC8 TZP ATAUX2-11 NDH18 AT5G44020 ATGLK2 AT5G44260 AT5G44520 AT5G44530 AT5G45650 ATFKBP13 CIPK20 APE2 LON2 AT5G47330 AMK2 HINT3 AT5G48790 ATBXL1 ATFRO8 CAA33 At-NEET CRR1 AT5G52660 UBC10 CLPX AT5G53360 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO BBX29 PDC2 BAM4 ATCBL2 AT5G56850 GATA21 BGAL4 ABI2 ACA8 ORP4C AHA3 ADO1 AT5G57565 CIPK21 AT5G57655 ATCOL5 XBAT32 APO2 NdhN AT5G58280 WNK4 AT5G58800 ftsh9 AT5G58950 ATMYB59 APRR3 OBP4 ATMYB34 PIF7 APRR1 EMB2728 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AT5G62350 CDF1 AT5G62900 AT5G63080 BT1 NF-YC4 SHA1 BGAL6 AtBGAL10 PSAN AtMC3 AT5G64250 AT5G64380 AT5G64500 ATBXL4 AGL31 AGL70 XTH6 STR16 ATLFNR1 MSP-1 ATHB53 ABA1 DEAR2 ATBT4 RBCL RPL32
GO:0015994 chlorophyll metabolic process	BP	1.671e-31	encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AVDE1 CRB AT1G16840 NDF6 ATCLH1 AHK3 GAPB ATCAO ALDH7B4 AtTLP18.3 AtHEMA1 AT1G62250 AT1G67700 STN7 ABCB26 AT1G71480 AT1G73750 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G76450 AT1G76570 BBX22 ALDH6B2 AT2G14910 AtOZF1 ATGLK1 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AT2G38800 AT2G44920 ATCYP38 AT3G13040 ADS3 ARR1 PUT5 AT3G23700 AT3G26580 DEG1 ACD1 AT3G45900 PTAC16 ATPTR1 AT3G57680 AT3G61080 CSP41A ATPC1 APX4 AT4G11570 NYC1 J20 AtCLA1 ATNYE1 CHLM CGA1 PORB ATSDX1 ATH1 AtGLDP1 AIRP2 ATLDA AT5G05200 AT5G08050 PMDH2 AT5G11840 ABAR AT5G14970 AT5G35970 ATGLK2 ATFKBP13 CLPX thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO PORA GATA21
GO:0006793 phosphorus metabolic process	BP	2.960e-31	PIP1;3 PSAD-2 PSB27 OE23 ATF2KP MAPKKK13 PSAO AVDE1 ATPPCK1 CRB FHY2 ATMPK1 ATGSTU18 GWD ATCXXS1 PEPKR2 AT1G12730 GAPA-2 AT1G13350 PnsL2 PKS2 CP24 NDF1 ABA3 HCF173 AT1G18270 NDF6 LHCA2*1 ATCLH1 ATLFNR2 ASG5 AT1G21590 UREF AT1G22630 AHK3 CYCT1;3 AT1G29700 AT1G29720 ACBP PRK AT1G32160 AT5P1 GAPB AtcFBP AT1G49730 FTSH1 AT1G51110 LYK3 AT1G52220 PSAH-2 ATMPK18 MAP3KA AT-RSH3 AtTLP18.3 AT1G54820 PSAG AT1G55960 AT1G56500 AT1G56720 AtNIK3 ATG8C HT1 AT1G65190 AT1G65230 AT1G66330 GDPDL2 AT1G67700 CSK ATHPR1 BBX14 STN7 ATCYCD1;1 AOAT2 CRR23 AT1G70820 AT1G71710 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. AT1G73980 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATCPK30 AT1G75460 ATCLV1 AT1G76110 AT1G76450 AtHMGR1 AT1G76570 AT1G77090 AT1G77280 BBX22 ATXRCC1 APG2 PLP PKS1 AT2G04690 AT2G15020 AtRLP19 ATMPK7 AtOZF1 ATGLK1 AT2G21530 AT2G21960 AGL22 SCPL8 AHA5 PLA CIPK3 AT2G27290 ALB3 AT2G29300 PY ANTR1 MAPKKK14 AT2G31010 BBX25 AT2G31800 CVL1 AT2G32090 ACK2 AT2G34310 AT2G35050 AT2G35260 AT2G37840 PDX1L4 ATPDX1.1 ATMTP11 RCA Encodes a putative amino acid transporter. AT2G40860 ACA4 COR15 AtPIF4 AT2G43560 AT2G43760 AT2G44920 ATMPK12 PSAP AT3G01060 ATCYP38 AT3G01490 ATBCA1 ATF1 AT3G03870 ATNEK2 ATWNK1 AIF1 ATPDHK MAP3KE2 ATPK1 LHCB4.2 PIP5K9 AT3G12320 SRF4 SPA3 ATHM4 ANAC055 ROD1 ADS3 MFP1 NDF4 HCF107 ATCRSH CIPK1 DAC ATPEN2 AT3G19850 PSBTN CYCP2;1 ATWNK2 AT3G23700 AT3G24715 AtCHUP1 DEG1 AT3G43220 JK224 AT3G46370 PTAC16 PEX11B AT3G48200 AT3G48420 ARLA1C SNRK2-2 AtIDD2 AT3G51370 ATSSL4 AFC1 PPL1 SBPASE AT3G57170 AT3G58640 AT3G59350 AT3G59780 AT3G61160 AT3G62220 CSP41A AT3G63240 AT4G01330 PETC ATPC1 ATKEA3 AT4G05070 AT4G05090 AT4G05150 ATCRY1 APX4 PLDGAMMA2 PLDGAMMA3 AT4G11900 MHK AT4G14480 AT4G15545 AtCLA1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G19860 PGR5-LIKE AT4G23050 CRK21 CRR31 AT4G24480 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) CHLM PSD3 ABI1 AtFBA7 AtFBA5 AT4G26860 AT4G27700 PPH1 AT4G28080 ckl4 AtVPS15 AT4G29990 AT4G31860 ATSDX1 ATH1 AtGLDP1 AT4G33080 FAB1A ATHDA14 CLB6 AT4G34920 HCF244 STY46 AT4G39270 AT5G01020 AT5G01260 ATCIPK14 AT5G03880 ATLDA ATPGIP2 AT5G08050 PMDH2 14-3-3lambda CIPK5 AT5G11410 AT5G14210 AT5G14410 AT5G14720 BETA ENH1 AT5G17670 AT5G18525 MPK16 ADG2 AT5G19940 ATHMA8 AT5G22050 ATSIG5 PGL5 ATCOL4 GME AT5G35170 G6PD1 PP2C74 AT5G38520 AtRLP54 AT5G40500 NDH18 ATGLK2 AT5G44520 ATFKBP13 CIPK20 APE2 AMK2 HINT3 AT5G48790 At-NEET thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. ATCBL2 ABI2 ACA8 AHA3 AT5G57565 CIPK21 APO2 NdhN WNK4 AT5G58950 APRR3 SHA1 PSAN ATLFNR1 MSP-1 ABA1
GO:0009719 response to endogenous stimulus	BP	3.155e-31	AT1G01260 FBI1 ATGLR3.4 AT1G05340 BT3 BBX24 ATMYB13 OE23 AtMYB60 CRB ATMPK1 AT1G11210 ATBETAFRUCT4 RHA2A ABA3 EPR1 TRM3 AtMYB47 ATCLH1 ATLFNR2 AtCOR47 AT1G20470 ASG5 ATMYB3 AHK3 ABCB14 COR413-TM1 AT1G29460 PRK ATMYC2 AT1G33050 ATGLR3.3 AtcFBP AT1G49010 ABF1 ATERF3 ABCG12 ANAC019 ESP ALDH7B4 AT1G56220 MSL3 AT1G62660 AT1G66760 BBX14 ACR4 AT-EXP1 AtCLO4 JAZ9 ATMYBL2 AT1G73480 AT1G73980 ATCPK30 JAZ2 AT1G75460 encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. AT1G75580 GASA1 AT1G76110 RAP2.4 AUF1 BBX22 ATBPC1 ATNRP1 XERICO AtRLP19 ATCOR413-PM1 AT2G17650 HBI1 ABX45 ATGLK1 AT2G21130 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AGL22 AtGRF1 AT2G23840 EBF1 ELF3 PDF1.2b AR781 PLA CIPK3 AT2G27500 ATOEP16-1 AT103-1A PY ANTR1 MAPKKK14 ATERF15 AT2G32090 AtCLO3 ATCPL3 AT2G36220 AT2G37030 PIP2;2 AT2G37950 AtAUX1 PDX1L4 RCA ATP5CS ATHSPRO2 COR15 TTL3 AtPIF4 AFO AGL20 ATMPK12 ARF11 AT2G46690 PSAP AtGolS1 ATCYP38 ATBCA1 ATGID1A AT3G05640 AIF1 RCI2A AT3G07310 AT3G11110 AT3G12320 AtGRF5 ATNCED3 ANAC055 TCTP ATEBP ARR1 CIPK1 JAI3 AT3G18050 ABF4 AT3G29410 AFP3 ATBT2 ARLA1C SNRK2-2 AtIDD2 P5CS2 SBPASE ARR9 AtSPP1 ATPIRIN1 AT3G59350 AT3G59940 AT3G60690 ATHB-12 AtTIR1 AT4G01330 PETC DFL2 RHA1B ATM4 IQD22 ECIP1 ATCBF3 ABI1 CGA1 PORB AT4G28080 AT4G29110 AtVPS15 MERI-5 AT4G32440 ABF3 AtMYB32 ATSEN1 UBC17 BEE2 COP3 BT5 AT4G38840 AT4G38860 CDL1 LCL1 DREB2 AT5G05600 ATPGIP2 PMDH2 14-3-3lambda AT5G10650 ANAC083 BETA AT5G14920 GASA4 ATMIXTA AtCor6.6 AtMYB43 RVE1 SAUR20 AT5G18030 NSH3 AILP1 AT5G20810 ATTTG1 ATCOL4 EBF2 BGLU37 AtTGG1 ATGID1C BHLH136 AtRLP54 ATAUX2-11 ATGLK2 LCR77 CIPK20 ATDOG1 AT5G52660 PYL8 AT5G53900 PORA AT5G55620 ATCBL2 GATA21 ABI2 AT5G57340 XBAT32 SKIP1 LTP3 ATMYB59 ATMYB34 BT1 AT5G63190 CYP94B1 NF-YC4 SHA1 AT5G64460 XTH6 ATLFNR1 ATDI8 MSP-1 ATHB53 ATBT4 RBCL
GO:0042440 pigment metabolic process	BP	5.110e-31	encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase HPD AVDE1 CRB NDF1 AT1G16840 NDF6 ATCLH1 AHK3 GAPB ATCAO ALDH7B4 AtTLP18.3 AT1G56500 AT1G57770 AtHEMA1 AT1G62250 AT1G65230 AT1G67700 STN7 ABCB26 ATMYBL2 AT1G71480 AT1G73750 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G76450 AT1G76570 BBX22 AT2G03310 ALDH6B2 AT2G14910 AtOZF1 ATGLK1 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AT2G38800 AT2G44920 ATCYP38 ATPPT2 AtLCY AT3G13040 ADS3 ARR1 PUT5 AT3G23700 AT3G26580 DEG1 AT3G28220 ACD1 AT3G45900 PTAC16 AT3G48420 ATPTR1 AT3G57680 AT3G59780 AT3G61080 CSP41A AtRbcX1 ATPC1 ATCRY1 APX4 AT4G11570 NYC1 J20 AtCLA1 CCD4 ATNYE1 CHLM CGA1 AtFBA5 PORB ATH1 AtGLDP1 HCF244 AIRP2 FD-GOGAT ATLDA AT5G05200 AT5G08050 PMDH2 AT5G11840 ABAR AT5G14970 AT5G35970 ATGLK2 ATFKBP13 AMK2 CLPX thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO PORA GATA21 NdhN ABA1
GO:0009725 response to hormone	BP	5.124e-30	AT1G01260 FBI1 BT3 BBX24 ATMYB13 OE23 AtMYB60 CRB ATMPK1 AT1G11210 ATBETAFRUCT4 RHA2A ABA3 EPR1 TRM3 AtMYB47 ATCLH1 ATLFNR2 AtCOR47 AT1G20470 ASG5 ATMYB3 AHK3 ABCB14 COR413-TM1 AT1G29460 PRK ATMYC2 AT1G33050 AtcFBP AT1G49010 ABF1 ATERF3 ABCG12 ANAC019 ESP ALDH7B4 AT1G56220 MSL3 AT1G62660 AT1G66760 BBX14 ACR4 AT-EXP1 AtCLO4 JAZ9 ATMYBL2 AT1G73480 AT1G73980 ATCPK30 JAZ2 AT1G75460 AT1G75580 GASA1 AT1G76110 RAP2.4 AUF1 BBX22 ATBPC1 ATNRP1 XERICO AtRLP19 ATCOR413-PM1 AT2G17650 HBI1 ABX45 ATGLK1 AT2G21130 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AGL22 AtGRF1 AT2G23840 EBF1 ELF3 PDF1.2b AR781 PLA CIPK3 AT2G27500 ATOEP16-1 AT103-1A ANTR1 MAPKKK14 ATERF15 AT2G32090 AtCLO3 ATCPL3 AT2G37030 PIP2;2 AT2G37950 AtAUX1 PDX1L4 RCA ATP5CS COR15 TTL3 AtPIF4 AFO AGL20 ATMPK12 ARF11 AT2G46690 PSAP AtGolS1 ATCYP38 ATBCA1 ATGID1A AT3G05640 AIF1 RCI2A AT3G07310 AT3G11110 AT3G12320 AtGRF5 ATNCED3 ANAC055 TCTP ATEBP ARR1 CIPK1 JAI3 AT3G18050 ABF4 AT3G29410 AFP3 ATBT2 ARLA1C SNRK2-2 AtIDD2 P5CS2 SBPASE ARR9 AtSPP1 ATPIRIN1 AT3G59940 AT3G60690 ATHB-12 AtTIR1 AT4G01330 PETC DFL2 ATM4 IQD22 ECIP1 ATCBF3 ABI1 CGA1 PORB AT4G28080 AtVPS15 MERI-5 ABF3 AtMYB32 ATSEN1 UBC17 BEE2 COP3 BT5 AT4G38840 AT4G38860 CDL1 LCL1 AT5G05600 ATPGIP2 PMDH2 14-3-3lambda AT5G10650 ANAC083 BETA AT5G14920 GASA4 ATMIXTA AtCor6.6 AtMYB43 RVE1 SAUR20 AT5G18030 NSH3 AILP1 AT5G20810 ATTTG1 ATCOL4 EBF2 BGLU37 AtTGG1 ATGID1C BHLH136 AtRLP54 ATAUX2-11 ATGLK2 LCR77 CIPK20 ATDOG1 AT5G52660 PYL8 AT5G53900 PORA AT5G55620 ATCBL2 GATA21 ABI2 AT5G57340 XBAT32 SKIP1 LTP3 ATMYB59 ATMYB34 BT1 AT5G63190 CYP94B1 NF-YC4 SHA1 AT5G64460 XTH6 ATLFNR1 ATDI8 MSP-1 ATHB53 ATBT4 RBCL
GO:0009416 response to light stimulus	BP	2.131e-29	FBI1 AT-PHH1 ATGLR3.4 BT3 ARI5 BBX24 OE23 AVDE1 AtMYB60 CRB FHY2 PKS2 SBH2 CP24 LHCA2*1 AT1G21400 FB KDR ABCB14 ATVOZ1 AB165 ACBP PRK OHP2 ATGLR3.3 GAPB AT1G52770 AtTLP18.3 AT1G56500 CAT2 AtHEMA1 ATFD2 RPOD1 ABA4 CSK ATHPR1 ADO3 AT-EXP1 ATMYBL2 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. BBX16 JAC1 GASA1 AT1G76450 AT1G76570 AGL27 GNR1 RAP2.4 BBX22 PSBR ALDH5F1 AT1G80780 AtJ8 PKS1 LHCB2 PGR5 ADO2 ELF3 AR781 PLA AT2G27140 CXIP4 CYP707A2 ANTR1 BBX25 ATGLR3.5 FHY1 AtAUX1 ATPDX1.1 RCA ATHSPRO2 ELF4 FBH4 COR15 MAX2 HLH1 AtPIF4 AT2G43280 ETFQO AGL20 ATBAG6 ROPGAP3 APRR9 AtGolS1 LHCB4.2 DIN4 AT3G15570 UVR3 AT3G15760 ADS3 AT3G19850 BBX31 AT3G22104 ATWNK2 GAPA LHCB2 JK224 PTAC16 AT3G47070 ASN1 AT3G52740 SIG3 LHCA1 AT3G57020 ATPIRIN1 AT3G60300 GATA4 ATPOB1 AT3G62190 CP12 CSP41A AHDP AGY1 PETC DFL2 ABC1 ATCRY1 APX4 LHCB5 AT4G15545 AtCLA1 ATVAMP724 PGR5-LIKE AGL19 CRR31 CGA1 AtPHR1 AtVPS15 ENP ATSDX1 ATH1 ATCBL10 KCS16 HCF244 ATSEN1 atbzip14 KAI2 COP3 SHM1 LHCB4.1 APRR7 LCL1 UBQ3 FD-GOGAT PKS4 DREB2 CBB3 AT5G05800 AT5G08430 NDC1 PMDH2 KNAT4 AT-HSP17.6A ENH1 RVE1 ADG2 ACL5 DIN10 WAV2 ATSIG5 APRR5 G6PD1 RBCS2B BHLH136 APE2 ATFRO6 EFO1 GATA21 ABI2 ADO1 AT5G57785 APO2 PIF7 APRR1 MSP-1 ABA1 AT5G67385
GO:0043436 oxoacid metabolic process	BP	3.243e-29	AT1G01260 MCCA ATKAO1 ARI5 BBX24 HPD OE23 ATSMO1 PSAO AVDE1 THA1 AMI1 CRB ATBCAT-1 ATBCAT-2 ATMPK1 GAPA-2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. SBH2 CP24 ABA3 AT1G18270 LHCA2*1 ATLFNR2 AtCOR47 HMG AT1G21670 AT1G21680 BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B. ATMYB3 AOAT1 AHK3 AML5 PSAK PSAF ACBP PRK ATMYC2 AT1G33110 AT1G35420 GAPB ATCAO AT1G49500 NTMC2T5.1 AT1G51110 PSAH-2 ESP ABCD2 AtTLP18.3 PSAG AT1G56500 CAT2 MSL3 LHCA3 UBC28 AT1G65230 AT1G66760 ABA4 AT1G67700 ATHPR1 ACR4 AOAT2 JAZ9 PATL1 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. JAZ2 GASA1 AT1G77090 GNR1 PSBR ALDH5F1 WRI4 XERICO ATSERAT3;1 AT2G17650 ATGRP7 SCPL8 AT2G24280 AtGLDP2 PLA AT2G26800 CYP707A2 AT103-1A PY ANTR1 GLX2-5 AT2G31810 ATKAO2 AtCLO3 atnudt22 AT2G35260 CAC3 PnsL1 DVL11 RCA ATP5CS AT2G41705 AT2G42220 ATPPC2 ETFQO AT2G43560 ATSAGT1 AT2G44920 ATHH2 ATCYP38 ATBCA1 AT3G01690 ATF1 AT3G04000 RCI2A ATSFR2 LHCB4.2 ATRAB8E PIP5K9 PAL4 ATNCED3 HEME1 ATHM4 ANAC055 ADS3 MFP1 NDF4 ARR1 JAI3 AT3G19030 AT3G19480 bHLH121 ABCG15 AT3G22440 AT3G23700 GAPA DEG1 AT-POX ATIVD PTAC16 ASN1 CAB4 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. SNRK2-2 AT3G51730 ACX4 P5CS2 ATDFD SBPASE AT3G56300 AT3G59780 ATPIP1 AtSLD1 PETC ATPC1 APX4 LHCB5 AT4G15260 CYP74B2 AtCLA1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. PIP1;5 NLP7 CHLM AtFBA7 AtFBA5 PORB AT4G28080 PSAE-1 AtVPS15 AT4G31050 ATSDX1 ATH1 AtGLDP1 LKR ATHDA14 KCS16 CLB6 AT4G34950 HCF244 AT4G35810 AtPLT6 ATMES9 SHM1 RD19 SHL1 AT4G39970 AT5G01020 AT5G01750 FD-GOGAT ATLDA AT5G05600 ATPGIP2 FTRA2 AT5G08415 AT5G08430 PMDH2 14-3-3lambda CBSX3 CARAB-AK-LYS AT5G14120 MPL1 BETA GASA4 AT5G16240 AT5G18600 AT5G19940 AT5G25770 BGLU37 AtTGG1 GME G6PD1 CAT3 AT5G38520 NDH18 AT5G44020 AT5G44520 ATFKBP13 APE2 ATFRO8 CRR1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO AHA3 ADO1 XBAT32 APO2 ATMYB34 AT5G62350 CYP94B1 PSAN AT5G64250 AT5G64500 STR16 ATLFNR1 MSP-1 ABA1
GO:0006082 organic acid metabolic process	BP	4.523e-29	AT1G01260 MCCA ATKAO1 ARI5 BBX24 HPD OE23 ATSMO1 PSAO AVDE1 THA1 AMI1 CRB ATBCAT-1 ATBCAT-2 ATMPK1 GAPA-2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. SBH2 CP24 ABA3 AT1G18270 LHCA2*1 ATLFNR2 AtCOR47 HMG AT1G21670 AT1G21680 BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B. ATMYB3 AOAT1 AHK3 AML5 PSAK PSAF ACBP PRK ATMYC2 AT1G33110 AT1G35420 GAPB ATCAO AT1G49500 NTMC2T5.1 AT1G51110 PSAH-2 ESP ABCD2 AtTLP18.3 PSAG AT1G56500 CAT2 MSL3 LHCA3 UBC28 AT1G65230 AT1G66760 ABA4 AT1G67700 ATHPR1 ACR4 AOAT2 JAZ9 PATL1 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. JAZ2 GASA1 AT1G77090 GNR1 PSBR ALDH5F1 WRI4 XERICO ATSERAT3;1 AT2G17650 ATGRP7 SCPL8 AT2G24280 AtGLDP2 PLA AT2G26800 CYP707A2 AT103-1A PY ANTR1 GLX2-5 AT2G31810 ATKAO2 AtCLO3 atnudt22 AT2G35260 CAC3 PnsL1 DVL11 RCA ATP5CS AT2G41705 AT2G42220 ATPPC2 ETFQO AT2G43560 ATSAGT1 AT2G44920 ATHH2 ATCYP38 ATBCA1 AT3G01690 ATF1 AT3G04000 RCI2A ATSFR2 LHCB4.2 ATRAB8E PIP5K9 PAL4 ATNCED3 HEME1 ATHM4 ANAC055 ADS3 MFP1 NDF4 ARR1 JAI3 AT3G19030 AT3G19480 bHLH121 ABCG15 AT3G22440 AT3G23700 GAPA DEG1 AT-POX ATIVD PTAC16 ASN1 CAB4 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. SNRK2-2 AT3G51730 ACX4 P5CS2 ATDFD SBPASE AT3G56300 AT3G59780 ATPIP1 AtSLD1 PETC ATPC1 APX4 LHCB5 AT4G15260 CYP74B2 AtCLA1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. PIP1;5 NLP7 CHLM AtFBA7 AtFBA5 PORB AT4G28080 PSAE-1 AtVPS15 AT4G31050 ATSDX1 ATH1 AtGLDP1 LKR ATHDA14 KCS16 CLB6 AT4G34950 HCF244 AT4G35810 AtPLT6 ATMES9 SHM1 RD19 SHL1 AT4G39970 AT5G01020 AT5G01750 FD-GOGAT ATLDA AT5G05600 ATPGIP2 FTRA2 AT5G08415 AT5G08430 PMDH2 14-3-3lambda CBSX3 CARAB-AK-LYS AT5G14120 MPL1 BETA GASA4 AT5G16240 AT5G18600 AT5G19940 AT5G25770 BGLU37 AtTGG1 GME G6PD1 CAT3 AT5G38520 NDH18 AT5G44020 AT5G44520 ATFKBP13 APE2 ATFRO8 CRR1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO AHA3 ADO1 XBAT32 APO2 ATMYB34 AT5G62350 CYP94B1 PSAN AT5G64250 AT5G64500 STR16 ATLFNR1 MSP-1 ABA1
GO:0065007 biological regulation	BP	9.200e-29	AT1G01260 PIP1;3 AT1G02300 FBI1 PSAD-2 PSB27 AT-PHH1 ATGLR3.4 HDG2 BT3 AT1G05805 ATMYB13 OE23 ATF2KP PSAO AVDE1 ACHT4 AtMYB60 AMI1 CRB FHY2 ATMPK1 AT1G10585 AT1G10610 ATSTP1 ATCXXS1 AT1G12120 ATCCS ICE2 GAPA-2 Encodes protein phosphatase 2A (PP2A) B'theta subunit. Targeted to peroxisomes. Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. WRKY4 PKS2 RHA2A CP24 ABA3 HCF173 ICR1 EPR1 TRM3 AtMYB47 NDF6 AT1G19000 LHCA2*1 ATRL5 ATCLH1 BEL10 ATLFNR2 ASG5 AT1G21060 UREF ATMYB3 ATRABG3B FB AT1G25275 BBX15 AT1G26665 AHK3 SPL11 SPL10 AT1G27520 CYCT1;3 ABCB14 AT1G28310 AtRLP4 ATVOZ1 AML5 PSAK AT1G31920 PRK AtLrgB AT1G32160 LOL1 ATMYC2 AT1G33050 OHP2 APRL4 ATGLR3.3 GAPB ATCAO BBX17 AT1G49500 ABF1 ATERF3 AT1G52220 PSAH-2 ANAC019 ATMPK18 ALDH7B4 AT1G54500 AtTLP18.3 PSAG AT1G56220 ATDI19 AtHEMA1 AtNIK3 ATFD2 AT1G62310 HT1 AT1G62660 UBC28 AT1G64370 AT1G64500 RPOD1 AtMYB20 ABA4 CSK AT1G67870 ATHPR1 ADO3 BBX27 BBX14 STN7 ACR4 ARC12 ANAC029 AT-EXP1 AIT1 ATCYCD1;1 ABCB26 JAZ9 CRR23 ATMYBL2 TRFL6 BBX16 AtRLP14 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G74730 ATCPK30 JAZ2 ATRL6 ATBBD1 BLH3 AT1G75460 encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. GASA1 ATCLV1 AT1G76110 ATL8 AtHMGR1 AT1G76530 AT1G76580 ATSKP2;2 AGL27 AT1G77090 TAPX RAP2.4 AUF1 BBX22 AT1G78995 PSBR ECT8 AT1G79600 WRI4 AtLa2 ATXRCC1 APG2 ATBPC1 PLP PKS1 WRKY3 ATNRP1 AT2G04700 PGR5 AGT AtRLP19 AT2G16365 AT2G17650 ATMPK7 AtTLP2 HBI1 ADO2 ABX45 AT2G19650 AtOZF1 AT2G20230 PSAE-2 ATGLK1 AT2G21530 ATGRP7 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AGL22 AtGRF1 SCPL8 EBF1 ATCTH ELF3 PDF1.2b AR781 PLA CIPK3 AT2G27290 AT2G27500 ALB3 AT2G28810 XBAT31 CXIP4 PY ANTR1 MAPKKK14 ETC2 TCL2 PSBW AT2G31040 ATERF15 BBX25 AT2G31800 ATOFP16 ATGLR3.5 ACK2 ATCPL3 AT2G34140 AT2G35260 AtGRF3 FHY1 AtAUX1 AT2G38300 SNZ ATMTP11 RCA ELF4 AT2G40260 ATFER4 AT2G40620 ACA4 AtSPL9 FBH4 COR15 TTL3 MAX2 HLH1 AML2 AtPIF4 AT2G44730 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHAM1 AFO AGL20 ATHH2 ATMPK12 ATBAG6 ARF11 ROPGAP3 APRR9 AT2G46810 PSAP UPB1 AT2G47880 AT2G47890 ATCYP38 ATBCA1 AT3G01690 ATCOL2 ATF1 ATGID1A AIF1 AT3G05990 ATPDHK A/N-InvC AT3G07310 ATPLC2 ATPK1 LHCB4.2 ATMT-1 ATRAB8E DREB2 AT3G12710 AT3G13000 AT3G13040 SRF4 BGAL1 AtGRF5 HEME1 ATMT3 ATHM4 ANAC055 AT3G15780 ADS3 MFP1 AT3G16220 AQP1 NDF4 TCTP ATEBP ARR1 HCF107 CIPK1 AT3G17640 JAI3 DAC AT3G18050 AT3G19030 ABF4 ATPEN2 AT3G19850 JMJ30 PSBTN ATSGP2 CYCP2;1 BBX31 AtCHUP1 ATB' AT3G26240 GAPA CCL DRB3 LHCB2 AT3G28220 AT3G29410 AFP3 ACD1 JK224 ATMYB48 AT3G46370 LUX AT3G47070 CAB4 CDF3 AT3G48200 ATBT2 ATHAP5A ARLA1C SNRK2-2 AtIDD2 BEH1 ATSSL4 AT3G51510 ATOFP18 BGAL2 AFC1 SIG3 LHCA1 PPL1 SBPASE ARR9 ATVLN3 AT3G57680 AT3G57800 ATPIRIN1 AT3G59780 AT3G59940 HAT3 GATA4 (AT)VAP ATHAM2 AT3G60690 AT3G61010 ATHB-12 ARFA1E CP12 AT3G62930 AT3G62950 AtTIR1 CSP41A OEP6 UNE10 AT4G01460 AGY1 AT4G03250 PETC AT4G04340 AtWRKY42 ATPC1 ABC1 ATKEA3 PSBQ ATCRY1 LHCB5 PSAL MHK AT4G13040 AtRLP47 CYP74B2 AT4G15545 AtCLA1 FCA AT4G16670 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17810 ATWRKY28 ATPP2-A1 ATPCAP1 ATM4 AT4G21650 ORP2A PGR5-LIKE AGL19 AT4G23050 CRR31 CHLM ATCBF2 ATCBF3 ABI1 CGA1 AtFBA7 BBX28 PORB AT4G27450 AT4G27700 PPH1 CRF4 AtPHR1 AtC3H49 AtVPS15 MERI-5 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. ENP AT4G32340 ATSDX1 ATH1 ATCBL10 AtGLDP1 FAB1A EX1 ABF3 AT4G34920 AtMYB32 AT4G35270 atbzip14 AT4G36210 AT4G36530 BEE2 AtPLT6 AtGBF1 AT4G37560 COP3 BT5 AT4G38690 AT4G39270 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT5G01020 LHCB4.1 ATFER1 AT5G01750 ATCIPK14 AT5G01990 AT5G02160 CDL1 APRR7 LCL1 AT5G03880 FD-GOGAT PKS4 AT5G05200 DREB2 AT5G05600 CBB3 WCRKC1 HAT14 ATPGIP2 AML4 AT5G08050 TCP17 FTRA2 AT5G08430 PMDH2 14-3-3lambda AT5G10650 CBSX3 CIPK5 KNAT4 ANAC083 CCS52B ROXY2 AT5G14210 AT5G14390 BETA AT5G14920 GASA4 ATMIXTA ATCNGC2 ATF2 AtMYB43 RVE1 AT5G18600 AtTLP11 MPK16 ATIPT5 ACL5 AT5G19940 CHR42 ATGER3 ATSIG5 APRR5 ATTTG1 ATBZIP9 ATCOL4 EBF2 BGLU37 AtTGG1 ATIREG3 AT5G27290 ATGID1C AT5G27950 G6PD1 CAT3 AT5G38520 BHLH136 AtRLP54 AT5G40450 ATCLC-A BEL1 ATUBC8 TZP ATAUX2-11 NDH18 AT5G43870 AT5G44020 ATGLK2 AT5G44260 TAO1 AT5G44530 AT5G44580 SUV2 AT5G45650 CIPK20 ATDOG1 APE2 LON2 AMK2 DIR1 AT5G48790 CAA33 At-NEET CRR1 EFO1 AT5G52660 PYL8 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G53500 AT5G53900 BBX29 ATCBL2 AT5G56100 GATA21 ABI2 ACA8 ADO1 CIPK21 ATCOL5 XBAT32 SKIP1 APO2 NdhN AT5G58280 AT5G58800 ATMYB59 APRR3 OBP4 ATMYB34 PIF7 APRR1 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. CDF1 AT5G63080 BT1 AT5G63190 NF-YC4 SHA1 PSAN AT5G64460 CLEL AGL31 AGL70 ATRLP57 STR16 ATLFNR1 MSP-1 ATHB53 ABA1 DEAR2 CYCD3;2 ATBT4
GO:0006778 porphyrin-containing compound metabolic ...	BP	1.989e-28	encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AVDE1 CRB AT1G16840 NDF6 ATCLH1 AHK3 GAPB ATCAO ALDH7B4 AtTLP18.3 AtHEMA1 AT1G62250 AT1G67700 STN7 ABCB26 AT1G71480 AT1G73750 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G76450 AT1G76570 BBX22 ALDH6B2 AT2G14910 AtOZF1 ATGLK1 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AT2G38800 AT2G44920 ATCYP38 AT3G13040 HEME1 ADS3 ARR1 PUT5 AT3G23700 AT3G26580 DEG1 ACD1 AT3G45900 PTAC16 ATPTR1 AT3G57680 AT3G61080 CSP41A ATPC1 APX4 AT4G11570 NYC1 J20 AtCLA1 ATNYE1 CHLM CGA1 PORB ATSDX1 ATH1 AtGLDP1 AIRP2 ATLDA AT5G05200 AT5G08050 PMDH2 AT5G11840 ABAR AT5G14970 AT5G35970 ATGLK2 ATFKBP13 CLPX thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO PORA GATA21
GO:0033013 tetrapyrrole metabolic process	BP	1.989e-28	encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AVDE1 CRB AT1G16840 NDF6 ATCLH1 AHK3 GAPB ATCAO ALDH7B4 AtTLP18.3 AtHEMA1 AT1G62250 AT1G67700 STN7 ABCB26 AT1G71480 AT1G73750 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G76450 AT1G76570 BBX22 ALDH6B2 AT2G14910 AtOZF1 ATGLK1 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AT2G38800 AT2G44920 ATCYP38 AT3G13040 HEME1 ADS3 ARR1 PUT5 AT3G23700 AT3G26580 DEG1 ACD1 AT3G45900 PTAC16 ATPTR1 AT3G57680 AT3G61080 CSP41A ATPC1 APX4 AT4G11570 NYC1 J20 AtCLA1 ATNYE1 CHLM CGA1 PORB ATSDX1 ATH1 AtGLDP1 AIRP2 ATLDA AT5G05200 AT5G08050 PMDH2 AT5G11840 ABAR AT5G14970 AT5G35970 ATGLK2 ATFKBP13 CLPX thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO PORA GATA21
GO:0009314 response to radiation	BP	1.589e-27	FBI1 AT-PHH1 ATGLR3.4 BT3 ARI5 BBX24 OE23 AVDE1 AtMYB60 CRB FHY2 PKS2 SBH2 CP24 LHCA2*1 AT1G21400 FB KDR ABCB14 ATVOZ1 AB165 ACBP PRK OHP2 ATGLR3.3 GAPB AT1G52770 AtTLP18.3 AT1G56500 CAT2 AtHEMA1 ATFD2 RPOD1 ABA4 CSK ATHPR1 ADO3 AT-EXP1 ATMYBL2 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. BBX16 JAC1 GASA1 AT1G76450 AT1G76570 AGL27 GNR1 RAP2.4 BBX22 PSBR ALDH5F1 AT1G80780 AtJ8 PKS1 LHCB2 PGR5 ADO2 ELF3 AR781 PLA AT2G27140 CXIP4 CYP707A2 ANTR1 BBX25 ATGLR3.5 FHY1 AtAUX1 ATPDX1.1 RCA ATHSPRO2 ELF4 FBH4 COR15 MAX2 HLH1 AtPIF4 AT2G43280 ETFQO AGL20 ATBAG6 ROPGAP3 APRR9 AtGolS1 LHCB4.2 DIN4 AT3G15570 UVR3 AT3G15760 ADS3 AT3G19850 BBX31 AT3G22104 ATWNK2 GAPA LHCB2 JK224 PTAC16 AT3G47070 ASN1 AT3G52740 SIG3 LHCA1 AT3G57020 ATPIRIN1 AT3G60300 GATA4 ATPOB1 AT3G62190 CP12 CSP41A AHDP AGY1 PETC DFL2 ABC1 ATCRY1 APX4 LHCB5 AT4G15545 AtCLA1 ATVAMP724 PGR5-LIKE AGL19 CRR31 CGA1 AtPHR1 AtVPS15 ENP ATSDX1 ATH1 ATCBL10 KCS16 HCF244 ATSEN1 atbzip14 KAI2 COP3 SHM1 LHCB4.1 APRR7 LCL1 UBQ3 FD-GOGAT PKS4 DREB2 CBB3 AT5G05800 AT5G08430 NDC1 PMDH2 KNAT4 AT-HSP17.6A ENH1 RVE1 ADG2 ACL5 DIN10 WAV2 ATSIG5 APRR5 G6PD1 RBCS2B BHLH136 APE2 ATFRO6 EFO1 GATA21 ABI2 ADO1 AT5G57785 APO2 PIF7 APRR1 MSP-1 ABA1 AT5G67385
GO:0006807 nitrogen compound metabolic process	BP	1.705e-27	AT1G01260 MCCA PSB27 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT-PHH1 HDG2 BT3 AT1G05805 ARI5 ATNTH2 ATMYB13 HPD OE23 ATSMO1 PSAO AVDE1 THA1 AtMYB60 AMI1 CRB FHY2 ATBCAT-1 ATBCAT-2 ATMPK1 ATGSTU18 AT1G10585 AT1G10610 ICE2 GAPA-2 WRKY4 PnsL2 SBH2 CP24 AT1G15970 NDF1 ABA3 AT1G16840 AT1G18270 EPR1 AtMYB47 NDF6 AT1G19000 LHCA2*1 ATRL5 AT1G19660 ATCLH1 BEL10 ATLFNR2 AT1G21060 UREF AT1G22630 ATMYB3 FB AOAT1 BBX15 AT1G26580 AT1G26665 AHK3 SPL11 SPL10 CYCT1;3 AT1G28310 ATVOZ1 PSAK PSAF AtTRM9 ACBP AT1G31920 PRK ATMYC2 AT1G33110 AT1G33700 AT1G35420 GAPB ATCAO Lhca5 DYW1 AT1G49010 BBX17 AT1G49500 ABF1 FTSH1 NTMC2T5.1 ATERF3 AT1G51110 AT1G52220 PSAH-2 ANAC019 ALDH7B4 AT-RSH3 AT1G54500 AtTLP18.3 PSAG ATDI19 AT1G56500 AtHEMA1 AT1G60590 LHCA3 ATG8C AT1G62250 AT1G62310 AT1G62660 UBC28 AT1G64680 RPOD1 AT1G65230 AtMYB20 GDPDL2 AT1G67700 CSK ATHPR1 ADO3 BBX27 BBX14 STN7 ACR4 ANAC029 ATCYCD1;1 AOAT2 ABCB26 CRR23 AT1G70820 ATMYBL2 AT1G71480 TRFL6 AT1G73750 BBX16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATRL6 ATBBD1 BLH3 AT1G75460 encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. GASA1 AT1G76110 AT1G76450 AtHMGR1 AT1G76570 AT1G76580 AGL27 AT1G77090 GNR1 RAP2.4 BBX22 AT1G78995 PSBR ALDH5F1 WRI4 AtLa2 ATXRCC1 AT1G80780 APG2 ATBPC1 AT2G02570 PLP WRKY3 AT2G03390 ALDH6B2 AT2G14910 AtRLP19 AT2G16365 ATSERAT3;1 AtTLP2 HBI1 ADO2 AtOZF1 ATGLK1 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AT2G21530 ATGRP7 AT2G21960 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AtRIBA2 AGL22 SCPL8 AHA5 ATCTH AtGLDP2 AT2G26500 AT2G26800 AT2G27290 ALB3 AT2G28810 AT2G29360 PY MAPKKK14 ETC2 TCL2 PSBW ATERF15 BBX25 AT2G31810 ATOFP16 ACK2 ATCPL3 AT2G34140 UMAMIT13 FHY1 PDX1L4 ATPDX1.1 AT2G38300 AT2G38800 SNZ PnsL1 ATP5CS AT2G40260 AT2G40620 ACA4 AT2G41705 AtSPL9 AT2G42220 FBH4 COR15 HLH1 AtPIF4 AT2G43280 ETFQO AT2G43560 AT2G43760 ATSAGT1 AT2G44730 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHAM1 AGL20 AT2G46250 ARF11 APRR9 AT2G46810 PSAP UPB1 AT2G47890 ATCYP38 ATBCA1 AT3G01690 RAD23-3 ATF1 AT3G04000 AIF1 LHCB4.2 ATRAB8E PIP5K9 PAL4 DREB2 AT3G12710 AT3G13000 AT3G13040 AtGRF5 HEME1 ATHM4 ANAC055 UVR3 AT3G15780 ROD1 ADS3 MFP1 AT3G16220 NDF4 ATEBP ARR1 HCF107 ATCRSH DAC AT3G19030 ABF4 AT3G19480 PUT5 JMJ30 PSBTN BBX31 AT3G22440 AT3G23700 AtCHUP1 AT3G26580 GAPA DRB3 LHCB2 DEG1 AFP3 AT-POX ACD1 ATIVD JK224 AT3G45900 ATMYB48 LUX PTAC16 AT3G47070 ASN1 PEX11B CAB4 CDF3 AT3G48200 ATBT2 AT3G48420 ATHAP5A AT3G48900 AtIDD2 BEH1 ATSSL4 ATOFP18 AFC1 SIG3 ATPTR1 LHCA1 PPL1 P5CS2 ATDFD SBPASE AT3G56300 AT3G57020 ARR9 AT3G57680 AT3G57800 AtSPP1 AT3G59780 HAT3 GATA4 ATHAM2 AT3G61080 ATHB-12 CSP41A OEP6 UNE10 AT4G01460 AT4G03250 PETC AtWRKY42 ATPC1 ATCRY1 APX4 LHCB5 AT4G11570 PLDGAMMA2 PLDGAMMA3 PSAL AT4G12830 AT4G13040 NYC1 J20 AT4G15260 CYP74B2 AtCLA1 FCA encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17810 ATWRKY28 AT4G18740 AT4G18810 ATM4 PGR5-LIKE ATNYE1 AGL19 AT4G23050 NLP7 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) CHLM ATCBF2 ATCBF3 CGA1 AtFBA7 AtFBA5 BBX28 PORB AT4G27700 CRF4 AT4G28080 AtPHR1 PSAE-1 AtC3H49 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. AT4G32340 ATSDX1 ATH1 AtGLDP1 LKR ATHDA14 ABF3 AtMYB32 HCF244 AT4G35270 AT4G35810 atbzip14 AT4G36210 BEE2 AtPLT6 AtGBF1 BT5 SHM1 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT5G01020 AIRP2 LHCB4.1 AT5G01750 AT5G02160 CDL1 APRR7 LCL1 ATLDA AT5G05200 DREB2 HAT14 ATPGIP2 AT5G08050 TCP17 FTRA2 AT5G08430 PMDH2 KNAT4 AT5G11840 ANAC083 ABAR CCS52B CARAB-AK-LYS ROXY2 AT5G14120 AT5G14970 GASA4 ATMIXTA AtMYB43 ENH1 RVE1 AtTLP11 NSH3 ATIPT5 ADG2 AT5G19940 CHR42 ATHMA8 ATSIG5 PGL5 APRR5 ATBZIP9 ATCOL4 AT5G25770 AT5G27730 GME AT5G35170 G6PD1 AT5G35970 CAT3 AT5G38520 AT5G40060 AtRLP54 BEL1 ATUBC8 TZP ATAUX2-11 AT5G44020 ATGLK2 AT5G44260 AT5G44520 ATFKBP13 APE2 AMK2 HINT3 At-NEET CRR1 AT5G52660 CLPX thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO PORA BBX29 ATCBL2 AT5G56850 GATA21 ACA8 AHA3 ADO1 ATCOL5 XBAT32 APO2 NdhN AT5G58280 AT5G58800 ATMYB59 APRR3 ATPDX2 OBP4 ATMYB34 PIF7 APRR1 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. CDF1 AT5G63080 BT1 NF-YC4 SHA1 PSAN AT5G64250 AT5G64380 AT5G64500 AGL31 AGL70 STR16 ATLFNR1 MSP-1 ATHB53 DEAR2 ASL39 ATBT4 RBCL RPL32
GO:0044712 single-organism catabolic process	BP	2.517e-27	MCCA encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT-PHH1 ARI5 BBX24 AVDE1 THA1 ATBCAT-1 ATBCAT-2 ATMPK1 ATGSTU18 GAPA-2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G16840 AT1G18270 ATCLH1 AtCOR47 HMG HMGB3 AT1G21670 AT1G21680 BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B. AOAT1 AHK3 AML5 AT1G33700 AT5P1 GAPB AT1G49500 ESP ALDH7B4 CAT2 AT1G62250 UBC28 ABA4 STN7 ABCB26 AT1G71480 AT1G71710 PATL1 AT1G73750 GASA1 AT1G76570 ALDH5F1 ALDH6B2 AT2G14910 MIOX2 AtOZF1 ATGRP7 SCPL8 ATGPX1 AtGLDP2 ALB3 AT103-1A GLX2-5 ATGPX2 CVL1 ATLMCO4 AT2G38240 AT2G38800 DVL11 ETFQO ATHH2 AT3G04000 RCI2A PAL4 AT3G13040 BGAL1 HEME1 ATHM4 ARR1 PUT5 bHLH121 ABCG15 AT3G22440 AT3G26580 GAPA DEG1 CYP81D11 AT-POX AT3G43220 ACD1 ATIVD AT3G45900 ASN1 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. SNRK2-2 AT3G51730 ACX4 BGAL2 ATPTR1 AtSIP2 AT3G57680 AT3G61080 ATPIP1 AtSLD1 AT3G63240 ATPC1 AT4G11570 ATGPX6 PLDGAMMA2 NYC1 J20 CYP74B2 AT4G15545 AtCLA1 AT4G15610 AT4G16190 ATWRKY28 AT4G19860 ATNYE1 PIP1;5 ATTRE1 BGAL12 AtFBA7 AtFBA5 AtVPS15 AT4G31050 ATH1 AtGLDP1 LKR AtPLT6 SHM1 ATCAD8 RD19 SHL1 AIRP2 AT5G01750 ATLDA AT5G05200 NDC1 PMDH2 14-3-3lambda CBSX3 AT5G11840 MPL1 BETA AT5G14970 AT5G18600 NSH3 A/N-InvE BGLU37 AtTGG1 AT5G27920 AT5G35970 CAT3 AT5G44520 CLPX AtHGO BGAL4 ADO1 AT5G62350 AT5G64500 STR16
GO:0019752 carboxylic acid metabolic process	BP	5.722e-26	AT1G01260 MCCA ATKAO1 ARI5 BBX24 HPD OE23 ATSMO1 PSAO AVDE1 THA1 AMI1 CRB ATBCAT-1 ATBCAT-2 ATMPK1 GAPA-2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. SBH2 CP24 ABA3 AT1G18270 LHCA2*1 ATLFNR2 AtCOR47 HMG AT1G21670 AT1G21680 BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B. ATMYB3 AOAT1 AHK3 AML5 PSAK PSAF ACBP PRK ATMYC2 AT1G33110 AT1G35420 GAPB ATCAO AT1G49500 NTMC2T5.1 AT1G51110 PSAH-2 AtTLP18.3 PSAG AT1G56500 CAT2 MSL3 LHCA3 UBC28 AT1G65230 AT1G66760 ABA4 AT1G67700 ATHPR1 ACR4 AOAT2 JAZ9 PATL1 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. JAZ2 GASA1 AT1G77090 PSBR ALDH5F1 WRI4 XERICO ATSERAT3;1 AT2G17650 ATGRP7 SCPL8 AtGLDP2 PLA AT2G26800 CYP707A2 AT103-1A PY ANTR1 GLX2-5 AT2G31810 ATKAO2 AtCLO3 atnudt22 CAC3 PnsL1 DVL11 RCA ATP5CS AT2G41705 AT2G42220 ATPPC2 ETFQO AT2G43560 ATSAGT1 AT2G44920 ATHH2 ATCYP38 ATBCA1 AT3G01690 ATF1 AT3G04000 RCI2A LHCB4.2 ATRAB8E PIP5K9 PAL4 ATNCED3 HEME1 ATHM4 ANAC055 ADS3 MFP1 NDF4 ARR1 JAI3 AT3G19030 AT3G19480 bHLH121 ABCG15 AT3G22440 AT3G23700 GAPA AT-POX ATIVD ASN1 CAB4 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. SNRK2-2 AT3G51730 ACX4 P5CS2 ATDFD SBPASE AT3G56300 AT3G59780 ATPIP1 AtSLD1 PETC ATPC1 APX4 LHCB5 AT4G15260 CYP74B2 AtCLA1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. PIP1;5 CHLM AtFBA7 AtFBA5 PORB AT4G28080 PSAE-1 AtVPS15 AT4G31050 ATSDX1 ATH1 AtGLDP1 LKR ATHDA14 KCS16 CLB6 HCF244 AT4G35810 AtPLT6 ATMES9 SHM1 RD19 SHL1 AT5G01020 AT5G01750 FD-GOGAT ATLDA AT5G05600 ATPGIP2 FTRA2 AT5G08415 AT5G08430 PMDH2 14-3-3lambda CBSX3 CARAB-AK-LYS AT5G14120 MPL1 BETA GASA4 AT5G16240 AT5G18600 AT5G19940 AT5G25770 GME G6PD1 CAT3 NDH18 AT5G44020 AT5G44520 ATFKBP13 APE2 CRR1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO ADO1 XBAT32 APO2 ATMYB34 AT5G62350 CYP94B1 PSAN AT5G64250 AT5G64500 STR16 ATLFNR1 MSP-1 ABA1
GO:0044711 single-organism biosynthetic process	BP	1.090e-25	PIP1;3 AtD27 AT1G03520 ATKAO1 ACD31.2 HPD OE23 AT1G07280 ATSMO1 PSAO AVDE1 AMI1 CRB GWD ATCXXS1 AT1G12730 ATUGE1 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. SBH2 CP24 NDF1 ABA3 NDF6 LHCA2*1 ATLFNR2 UREF AT1G22630 ATMYB3 AOAT1 MENG AT1G29700 PSAK AAE14 PSAF ACBP PRK ATMYC2 AT1G33110 AT1G35420 GAPB AtcFBP ATCAO AT1G49500 AT1G51110 PSAH-2 ABCD2 AtTLP18.3 PSAG UKL3 AT1G55960 AT1G56500 AT1G57770 AtHEMA1 LHCA3 ATG8C AT1G62660 UBC28 TUA1 AT1G65230 AT1G66330 AT1G66760 GDPDL2 ABA4 AT1G67700 ATHPR1 ATTPS6 ATCYCD1;1 ATTPS8 AOAT2 JAZ9 AT1G70820 ATMYBL2 AT1G73655 AT1G73920 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. JAZ2 GASA1 AT1G76450 AtHMGR1 AT1G76570 AT1G77090 BBX22 PSBR ECT8 WRI4 APG2 AT2G01460 AT2G02570 AT2G03310 AT2G04690 AT2G04700 AT2G15020 ATSERAT3;1 AT2G17650 ATTPS11 ABX45 AtOZF1 ATGLK1 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AT2G21530 ATGRP7 ATCAD3 AtRIBA2 SQE2 SCPL8 AT2G24280 AHA5 PLA AT2G27290 ALB3 AT2G29300 PY ANTR1 AT2G31040 BBX25 AT2G31810 AT2G32090 BAM6 ATKAO2 ACK2 atnudt22 AT2G34310 AT2G35260 BE3 AT2G37585 AT2G37840 CAC3 ATLMCO4 AtAUX1 PDX1L4 ATPDX1.1 ATMTP11 PnsL1 RCA ATP5CS Encodes a putative amino acid transporter. ACA4 AT2G42220 ATPPC2 ETFQO AT2G43560 AT2G44920 AtGolS1 AT2G47890 AT3G01060 ATCYP38 ATBCA1 ATPPT2 AT3G01690 ATF1 AT3G03870 AT3G03990 ATGID1A ATSFR2 LHCB4.2 ATRAB8E AtLCY PAL4 ARAF AT3G12320 ATNCED3 HEME1 ATHM4 ANAC055 AT3G15570 ADS3 MFP1 NDF4 ARR1 HCF107 JAI3 DAC AT3G18500 AT3G19030 AT3G19480 AT3G23480 AT3G23700 AtCHUP1 GAPA DEG1 AT3G28220 AT-POX AT3G43220 PTAC16 ATPHS2 ASN1 CAB4 AT3G48200 AT3G48420 ARLA1C AT3G51510 SIG3 P5CS2 ATDFD SBPASE AT3G57170 AT3G59780 AtSLD1 CP12 CSP41A OEP6 GATL6 PETC AtRbcX1 AT4G04340 ATPC1 AT4G05070 APX4 LHCB5 AT4G15260 CYP74B2 AtCLA1 AtBAM3 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. ATSS4 CCD4 PGR5-LIKE CHLM PSD3 CGA1 AtFBA5 AT4G26860 PORB AT4G27700 AT4G28080 PSAE-1 AT4G31050 AT4G31860 ATSDX1 ATH1 ATCBL10 AtGLDP1 ATHDA14 KCS16 CLB6 AT4G34920 AT4G34950 HCF244 AT4G36530 AtPLT6 SHM1 ATCAD8 AT4G39970 AT5G01020 AT5G01260 AT5G01750 AT5G02940 FD-GOGAT ATSYTC ATLDA AT5G05200 AT5G05600 CBB3 AT5G08050 FTRA2 AT5G08415 AT5G08430 PMDH2 14-3-3lambda ABAR CCS52B CARAB-AK-LYS AT5G14120 AT5G14410 BETA AT5G14970 GASA4 AT5G16240 AtMYB43 ADG2 ACL5 AT5G19940 ATHMA8 ATSIG5 AT5G24155 ATGID1C GME G6PD1 CAT3 AT5G38520 APE1 AT5G40500 ATUBC8 NDH18 AT5G44020 ATGLK2 AT5G44520 ATFKBP13 APE2 AMK2 ATFRO8 CRR1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. PORA PDC2 GATA21 ACA8 AHA3 XBAT32 APO2 NdhN WNK4 ATPDX2 ATMYB34 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. SHA1 PSAN AT5G64500 STR16 ATLFNR1 MSP-1 ABA1
GO:0006950 response to stress	BP	1.713e-24	PIP1;3 ATATG18G AT-PHH1 ATGLR3.4 BT3 ATNTH2 BBX24 ATMYB13 ACD31.2 OE23 AVDE1 AtMYB60 CRB ATMPK1 GWD AT1G11210 ATSTP1 ATBETAFRUCT4 ATCCS ICE2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. RHA2A CP24 AT1G15970 ABA3 EPR1 AtMYB47 LCR78 AT1G19660 ATCLH1 ATLFNR2 AtCOR47 HMG AT1G21400 ATMYB3 FB AT1G23130 AOAT1 AT1G25275 AHK3 ABCB14 COR413-TM1 ATSRX ACBP PRK LOL1 ATMYC2 ATGLR3.3 GAPB ATH5 AT1G49010 ATERF3 ABCG12 ANAC019 ATMSRB1 ESP ALDH7B4 ATDI19 MSL3 AtHEMA1 AT1G60010 ATFD2 ATG8C AT1G62660 UBC28 AT1G64370 RPOD1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. BGLU21 AT1G66330 AT1G66760 GDPDL2 AT1G67865 AT1G67870 ATHPR1 BBX14 ANAC029 ABCB26 AtCLO4 JAZ9 AT1G70820 ATMYBL2 PATL1 TRFL6 AT1G73480 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. JAZ2 ATBBD1 AT1G75460 AT1G76110 AtHMGR1 ATSKP2;2 AGL27 TAPX RAP2.4 BBX22 ECT8 ALDH5F1 ATXRCC1 LCR69 AT2G03390 ATNRP1 XERICO PGR5 AGT ALDH6B2 AtRLP19 MEE14 ATCOR413-PM1 HIS1-3 ATMPK7 ATSYP112 ABX45 AtOZF1 AT2G20230 ATGLK1 AT2G21130 ATGRP7 AGL22 AT2G23840 ATGPX1 ELF3 PDF1.3 PDF1.2b AR781 PLA AT2G27140 AT2G27500 ATOEP16-1 AT103-1A ANTR1 ATGPX2 AtCLO3 ATCPL3 AT2G34060 AT2G36220 AT2G37130 PIP2;2 RCA ATP5CS ATHSPRO2 ATFER4 AT2G41060 ACA4 COR15B COR15 TTL3 ATPPC2 MAX2 AtPIF4 AT2G43280 ATTI2 AT2G44920 ATATG8E AGL20 ATHH2 ATBAG6 AtGolS1 AT2G47890 ATCYP38 ATBCA1 RAD23-3 AT3G03990 ATGID1A AT3G05640 AIF1 RCI2A ATSFR2 ATPK1 AT3G10020 AT3G10060 DREB2 AT3G12320 AT3G12710 DIN4 GOX2 GOX1 ATNCED3 ATMT3 ATHM4 ANAC055 UVR3 ADS3 AQP1 TCTP ATEBP CIPK1 JAI3 AT3G19030 ABF4 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. AT3G23700 AT3G23910 GAPA DRB3 LHCB2 CYP81D11 AT-POX ACD1 ATPHS2 ASN1 CHL ATBT2 AT3G48900 ARLA1C SNRK2-2 AtIDD2 AT3G51730 AT3G53990 P5CS2 SBPASE AtSIP2 ATPIRIN1 AT3G60690 AtPP2-A13 ATPIP1 ATHB-12 CP12 AtTIR1 PETC DFL2 AtRbcX1 ABC1 ATCRY1 APX4 ATGPX6 PLDGAMMA2 AtRLP47 ACD6 CYP74B2 AT4G15545 AT4G16490 AtBAM3 DELTA-TIP2 ATSS4 ATPP2-A1 ATPCAP1 ATM4 APG8A PGR5-LIKE AGL19 PIP1;5 NLP7 ECIP1 ATCBF2 ATCBF3 ABI1 AtFBA7 AT4G27450 AtPHR1 AtVPS15 AT4G31860 ATSDX1 ATCBL10 EX1 ABF3 AtMYB32 ATSEN1 atbzip14 ATMES9 AT4G37560 BT5 SHM1 ATCAD8 AT4G38840 RD19 SHL1 ATFER1 AT5G01750 LCL1 FD-GOGAT DREB2 AT5G05600 ABCG22 ATPGIP2 AT5G08430 PMDH2 14-3-3lambda CBSX3 ATVAMP713 AT-HSP17.6A ANAC083 CCS52B MPL1 BETA FDH AT5G14920 ATMIXTA ATCNGC2 AtCor6.6 RVE1 AT5G18130 NSH3 AT5G19970 DIN10 ATGER3 ATTTG1 ATCOL4 BGLU37 AtTGG1 ATGID1C AT5G27950 THI2.2 AT5G40060 AtRLP54 AT5G40450 ATCLC-A BEL1 ATUBC8 COR27 AT5G43740 NDH18 ATGLK2 LCR77 TAO1 AT5G44580 SUV2 atnudt8 DIR1 AT5G48620 CAA33 CRR1 AT5G52660 BBX29 ATHTA1 PDC2 AT5G55620 ATCBL2 ATOXS3 ABI2 ATCOL5 NdhN WNK4 AT5G59080 LTP3 ATMYB59 ATMYB34 EMB2728 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. AT5G62350 BT1 CYP94B1 SHA1 AT5G64110 AGL31 AGL70 XTH6 ATLFNR1 ATDI8 MSP-1 ABA1 ATBT4
GO:0009056 catabolic process	BP	2.027e-24	MCCA encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT-PHH1 ARI5 BBX24 FTSH8 AVDE1 THA1 ATBCAT-1 ATBCAT-2 ATMPK1 ATGSTU18 AMSH2 GWD GAPA-2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. ABA3 AT1G16840 AT1G18270 ATCLH1 AtCOR47 HMG HMGB3 AT1G21670 AT1G21680 BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B. ATRABG3B AOAT1 AT1G26580 AHK3 AML5 AT1G33700 AT5P1 GAPB AtcFBP AT1G49500 FTSH1 LYK3 AT1G53780 ESP ALDH7B4 AT1G55000 UKL3 CAT2 ATG8C AT1G62250 AT1G62660 UBC5 UBC28 TUA1 ABA4 ATHPR1 ADO3 AT1G68660 STN7 ABCB26 AT1G71480 AT1G71710 PATL1 TRFL6 AT1G73750 GASA1 AT1G76570 ATSKP2;2 ALDH5F1 ALDH6B2 AT2G14910 ADO2 MIOX2 AtOZF1 ATGRP7 ATUBP4 SCPL8 ATGPX1 EBF1 AtGLDP2 ALB3 AT103-1A GLX2-5 ATGPX2 AT2G31810 CVL1 BAM6 ACK2 BE3 ATLMCO4 AT2G38240 AT2G38800 DVL11 MAX2 ETFQO AT2G43540 ATATG8E ATHH2 ATI1 RAD23-3 AT3G04000 RCI2A PAL4 ARAF AT3G13040 BGAL1 HEME1 ATHM4 MFP1 ARR1 PUT5 bHLH121 ABCG15 AT3G22440 AT3G26580 GAPA DEG1 CYP81D11 AT-POX AT3G43220 ACD1 ATIVD AT3G45900 ASN1 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. SNRK2-2 AT3G51730 ACX4 BGAL2 ATPTR1 AtSIP2 AT3G57680 AT3G61080 ATPIP1 AtSLD1 AtTIR1 AT3G63240 UBQ14 ATRMA1 ATPC1 AT4G11570 ATGPX6 PLDGAMMA2 NYC1 J20 CYP74B2 AT4G15545 AtCLA1 AT4G15610 AT4G16190 ATG8F AtBAM3 ATWRKY28 ATSS4 AT4G19860 APG8A PGR5-LIKE ATNYE1 PIP1;5 ATTRE1 ABI1 BGAL12 AtFBA7 AtFBA5 AtVPS15 AT4G30790 AT4G31050 ATH1 AtGLDP1 LKR UBC17 AtPLT6 SHM1 ATCAD8 RD19 SHL1 AIRP2 AT5G01750 UPL4 UBQ3 ATLDA AT5G05200 NDC1 PMDH2 14-3-3lambda AT5G10650 CBSX3 AT5G11840 CCS52B MPL1 BETA AT5G14970 AT5G18600 NSH3 A/N-InvE EBF2 BGLU37 AtTGG1 AT5G27920 AT5G35970 CAT3 ATUBC8 AT5G44520 LON2 UBC10 CLPX AT5G53360 AtHGO PDC2 BAM4 BGAL4 ADO1 XBAT32 ftsh9 AT5G62350 AT5G64500 ATBXL4 STR16
GO:0072524 pyridine-containing compound metabolic p...	BP	3.482e-24	PSAO AVDE1 CRB ATGSTU18 PnsL2 NDF1 AT1G18270 NDF6 LHCA2*1 ATLFNR2 AT1G22630 PRK GAPB FTSH1 AT1G51110 PSAG AT1G65230 CRR23 AT1G76450 AT1G77090 AT2G21530 AT2G21960 PY PDX1L4 ATPDX1.1 AT2G43560 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATHM4 MFP1 NDF4 DAC AT3G19030 AT3G23700 DEG1 PTAC16 PEX11B AT3G48200 AT3G48420 PPL1 SBPASE AT3G59780 CSP41A PETC APX4 PGR5-LIKE AtFBA7 AtFBA5 AT4G27700 AtGLDP1 ATHDA14 ATLDA AT5G08050 PMDH2 ENH1 ADG2 PGL5 G6PD1 AT5G44520 At-NEET NdhN ATPDX2 PSAN ATLFNR1
GO:0035303 regulation of dephosphorylation	BP	9.714e-24	PSAD-2 PSB27 PSAO CRB ATMPK1 GAPA-2 CP24 ATCLH1 PRK AT1G52220 PSAH-2 AtTLP18.3 ATHPR1 BBX14 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G75460 AT1G76110 BBX22 ATXRCC1 APG2 AtRLP19 ATGLK1 AGL22 ALB3 COR15 AtPIF4 PSAP ATCYP38 AIF1 LHCB4.2 HCF107 PSBTN AtCHUP1 AtIDD2 SBPASE ATPC1 PGR5-LIKE AT5G03880 ATPGIP2 PMDH2 AT5G19940 ATCOL4 AtRLP54 ATGLK2 APE2 AT5G48790 ATCBL2 SHA1 PSAN MSP-1
GO:0007623 circadian rhythm	BP	1.346e-23	FBI1 AT-PHH1 AT1G07050 CRB FHY2 GWD EPR1 FB AHK3 ABF1 ADO3 STN7 ATMPK7 ADO2 ABX45 AT2G21130 ATGRP7 AtRIBA2 EBF1 AT2G25730 ELF3 ELF4 AtPIF4 APRR9 AT3G01060 AT3G01310 ATWNK1 TBL10 A/N-InvC AT3G12320 JMJ30 LUX PTAC16 ATBT2 Fes1B ARR9 AtTIR1 OEP6 ATCRY1 ATGPX6 AT4G16146 ATCBF3 CGA1 ATFIM1 AtPHR1 AT4G30350 AT4G33980 AT4G34950 SHM1 APRR7 LCL1 AT5G14550 RVE1 APRR5 EBF2 BBX8 GATA21 ADO1 APRR3 APRR1 AT5G62720
GO:0048511 rhythmic process	BP	1.346e-23	FBI1 AT-PHH1 AT1G07050 CRB FHY2 GWD EPR1 FB AHK3 ABF1 ADO3 STN7 ATMPK7 ADO2 ABX45 AT2G21130 ATGRP7 AtRIBA2 EBF1 AT2G25730 ELF3 ELF4 AtPIF4 APRR9 AT3G01060 AT3G01310 ATWNK1 TBL10 A/N-InvC AT3G12320 JMJ30 LUX PTAC16 ATBT2 Fes1B ARR9 AtTIR1 OEP6 ATCRY1 ATGPX6 AT4G16146 ATCBF3 CGA1 ATFIM1 AtPHR1 AT4G30350 AT4G33980 AT4G34950 SHM1 APRR7 LCL1 AT5G14550 RVE1 APRR5 EBF2 BBX8 GATA21 ADO1 APRR3 APRR1 AT5G62720
GO:1901360 organic cyclic compound metabolic proces...	BP	1.526e-23	AT1G01260 PIP1;3 AtD27 PSB27 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT-PHH1 HDG2 BT3 AT1G05805 ARI5 ATNTH2 ATMYB13 HPD OE23 ATSMO1 PSAO AVDE1 AtMYB60 AMI1 CRB FHY2 ATMPK1 ATGSTU18 AT1G10585 AT1G10610 ICE2 GAPA-2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. WRKY4 PnsL2 SBH2 AT1G15970 NDF1 ABA3 AT1G16840 AT1G18270 EPR1 AtMYB47 NDF6 AT1G19000 LHCA2*1 ATRL5 AT1G19660 ATCLH1 BEL10 ATLFNR2 AT1G21060 AT1G22630 ATMYB3 FB BBX15 AT1G26580 AT1G26665 AHK3 SPL11 SPL10 CYCT1;3 AT1G28310 ATVOZ1 AtTRM9 AT1G31920 PRK ATMYC2 GAPB ATCAO Lhca5 DYW1 AT1G49010 BBX17 AT1G49500 ABF1 FTSH1 NTMC2T5.1 ATERF3 AT1G51110 AT1G52220 PSAH-2 ANAC019 ALDH7B4 AT-RSH3 AT1G54500 AtTLP18.3 PSAG ATDI19 AT1G56500 AtHEMA1 AT1G60590 ATG8C AT1G62250 AT1G62310 AT1G62660 UBC28 AT1G64680 RPOD1 AT1G65230 AtMYB20 BGLU21 GDPDL2 AT1G67700 CSK ATHPR1 ADO3 BBX27 BBX14 STN7 ANAC029 ATCYCD1;1 ABCB26 CRR23 AT1G70820 ATMYBL2 AT1G71480 TRFL6 AT1G73750 BBX16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATRL6 ATBBD1 BLH3 AT1G75460 encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. GASA1 AT1G76110 AT1G76450 AtHMGR1 AT1G76570 AT1G76580 AGL27 AT1G77090 RAP2.4 BBX22 AT1G78995 ECT8 WRI4 AtLa2 ATXRCC1 AT1G80780 APG2 ATBPC1 AT2G02570 PLP WRKY3 AT2G03390 ALDH6B2 AT2G14910 AtRLP19 AT2G16365 AtTLP2 HBI1 ADO2 AtOZF1 ATGLK1 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AT2G21530 ATGRP7 ATCAD3 AT2G21960 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AtRIBA2 AGL22 SQE2 SCPL8 AHA5 ATCTH AT2G26500 PLA AT2G27290 ALB3 AT2G28810 AT2G29360 PY ANTR1 MAPKKK14 ETC2 TCL2 PSBW ATERF15 BBX25 ATOFP16 ACK2 ATCPL3 AT2G34140 UMAMIT13 FHY1 ATLMCO4 PDX1L4 ATPDX1.1 AT2G38300 AT2G38800 SNZ PnsL1 RCA ATP5CS AT2G40260 AT2G40620 ACA4 AT2G41705 AtSPL9 FBH4 COR15 HLH1 AtPIF4 AT2G43280 ETFQO AT2G43560 AT2G43760 ATSAGT1 AT2G44730 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHAM1 AGL20 AT2G46250 ARF11 APRR9 AT2G46810 PSAP UPB1 AT2G47890 ATCYP38 ATBCA1 RAD23-3 ATF1 AT3G03990 AT3G04000 AIF1 LHCB4.2 ATRAB8E PAL4 DREB2 AT3G12710 AT3G13000 AT3G13040 AtGRF5 HEME1 ATHM4 ANAC055 UVR3 AT3G15780 ADS3 MFP1 AT3G16220 NDF4 ATEBP ARR1 HCF107 ATCRSH DAC AT3G19030 ABF4 PUT5 JMJ30 PSBTN BBX31 AT3G22440 AT3G23700 AtCHUP1 AT3G26580 GAPA DRB3 LHCB2 DEG1 AFP3 AT-POX ACD1 JK224 AT3G45900 ATMYB48 LUX PTAC16 AT3G47070 PEX11B CDF3 AT3G48200 ATBT2 AT3G48420 ATHAP5A AT3G48900 AtIDD2 BEH1 ATSSL4 ATOFP18 AFC1 SIG3 ATPTR1 LHCA1 PPL1 P5CS2 ATDFD SBPASE AT3G56300 ARR9 AT3G57680 AT3G57800 AT3G59780 HAT3 GATA4 ATHAM2 AT3G61080 ATHB-12 CSP41A OEP6 UNE10 AT4G01460 AT4G03250 PETC AtWRKY42 ATPC1 ATCRY1 APX4 LHCB5 AT4G11570 PSAL AT4G12830 AT4G13040 NYC1 J20 CYP74B2 AtCLA1 FCA encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17810 ATWRKY28 AT4G18740 AT4G18810 ATM4 ORP2A PGR5-LIKE ATNYE1 AGL19 AT4G23050 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) CHLM ATCBF2 ATCBF3 CGA1 AtFBA7 AtFBA5 BBX28 PORB AT4G27700 CRF4 AT4G28080 AtPHR1 PSAE-1 AtC3H49 AT4G31050 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. AT4G32340 ATSDX1 ATH1 AtGLDP1 ATHDA14 ABF3 AtMYB32 HCF244 AT4G35270 AT4G35810 atbzip14 AT4G36210 BEE2 AtPLT6 AtGBF1 ATMES9 BT5 SHM1 ATCAD8 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT5G01020 AIRP2 LHCB4.1 AT5G01750 AT5G02160 CDL1 APRR7 LCL1 FD-GOGAT ATSYTC ATLDA AT5G05200 DREB2 CBB3 HAT14 ATPGIP2 AT5G08050 TCP17 FTRA2 AT5G08415 AT5G08430 PMDH2 KNAT4 AT5G11840 ANAC083 ABAR CCS52B ROXY2 BETA AT5G14970 ATMIXTA AtMYB43 ENH1 RVE1 AtTLP11 NSH3 ATIPT5 ADG2 CHR42 ATHMA8 ATSIG5 AT5G24155 PGL5 APRR5 ATBZIP9 ATCOL4 AT5G25770 AT5G27730 GME AT5G35170 G6PD1 AT5G35970 CAT3 AT5G38520 AT5G40060 AtRLP54 BEL1 ATUBC8 TZP ATAUX2-11 AT5G44020 ATGLK2 AT5G44260 AT5G44520 ATFKBP13 AMK2 HINT3 ATFRO8 At-NEET CRR1 AT5G52660 CLPX thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO PORA BBX29 ATCBL2 AT5G56850 GATA21 ACA8 ORP4C AHA3 ADO1 ATCOL5 XBAT32 APO2 NdhN AT5G58280 AT5G58800 ATMYB59 APRR3 ATPDX2 OBP4 ATMYB34 PIF7 APRR1 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. CDF1 AT5G63080 BT1 NF-YC4 SHA1 PSAN AT5G64250 AT5G64380 AT5G64500 AGL31 AGL70 STR16 ATLFNR1 MSP-1 ATHB53 DEAR2 ATBT4 RBCL RPL32
GO:0019637 organophosphate metabolic process	BP	1.659e-23	ATF2KP PSAO AVDE1 CRB ATGSTU18 ATCXXS1 AT1G12730 PnsL2 NDF1 AT1G18270 NDF6 LHCA2*1 ATLFNR2 UREF AT1G22630 AT1G29700 ACBP PRK AT5P1 GAPB AtcFBP FTSH1 AT1G51110 AT-RSH3 AtTLP18.3 PSAG AT1G55960 AT1G56500 ATG8C AT1G65230 AT1G66330 AT1G67700 AOAT2 CRR23 AT1G70820 AT1G71710 AT1G76450 AtHMGR1 AT1G76570 AT1G77090 AT2G04690 AT2G15020 AtOZF1 AT2G21530 AT2G21960 SCPL8 AHA5 AT2G27290 AT2G29300 PY BBX25 CVL1 AT2G32090 AT2G34310 PDX1L4 ATPDX1.1 ATMTP11 Encodes a putative amino acid transporter. ACA4 AT2G43560 AT2G43760 AT2G44920 PSAP AT3G01060 ATCYP38 ATBCA1 ATF1 AT3G03870 PIP5K9 AT3G12320 ATHM4 ROD1 ADS3 MFP1 NDF4 ATCRSH DAC ATPEN2 AT3G23700 DEG1 AT3G43220 PTAC16 PEX11B AT3G48200 AT3G48420 ARLA1C PPL1 SBPASE AT3G57170 AT3G59780 CSP41A AT3G63240 PETC ATPC1 AT4G05070 AT4G05090 APX4 PLDGAMMA2 PLDGAMMA3 AtCLA1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G19860 PGR5-LIKE CHLM PSD3 AtFBA7 AtFBA5 AT4G26860 AT4G27700 AT4G28080 ATSDX1 ATH1 AtGLDP1 FAB1A ATHDA14 CLB6 AT4G34920 HCF244 AT5G01260 ATLDA AT5G08050 PMDH2 AT5G14410 ENH1 AT5G17670 ADG2 ATHMA8 ATSIG5 PGL5 GME AT5G35170 G6PD1 AT5G38520 AT5G40500 NDH18 AT5G44520 ATFKBP13 AMK2 HINT3 At-NEET thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. ACA8 AHA3 NdhN PSAN ATLFNR1 ABA1
GO:0035304 regulation of protein dephosphorylation	BP	2.341e-23	PSAD-2 PSB27 PSAO CRB ATMPK1 GAPA-2 CP24 ATCLH1 PRK AT1G52220 PSAH-2 AtTLP18.3 ATHPR1 BBX14 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G75460 AT1G76110 BBX22 APG2 AtRLP19 ATGLK1 AGL22 ALB3 COR15 AtPIF4 PSAP ATCYP38 AIF1 LHCB4.2 HCF107 PSBTN AtCHUP1 AtIDD2 SBPASE ATPC1 PGR5-LIKE AT5G03880 ATPGIP2 PMDH2 AT5G19940 ATCOL4 AtRLP54 ATGLK2 APE2 AT5G48790 ATCBL2 SHA1 PSAN MSP-1
GO:0006733 oxidoreduction coenzyme metabolic proces...	BP	3.633e-23	PSAO AVDE1 CRB ATGSTU18 PnsL2 NDF1 AT1G18270 NDF6 LHCA2*1 ATLFNR2 AT1G22630 PRK GAPB FTSH1 AT1G51110 PSAG AT1G65230 CRR23 AT1G76450 AT1G77090 AT2G21530 AT2G21960 SCPL8 PY CAC3 AT2G43560 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATHM4 MFP1 NDF4 DAC AT3G23700 DEG1 PTAC16 PEX11B AT3G48200 AT3G48420 PPL1 SBPASE AT3G59780 CSP41A PETC ATPC1 APX4 AtCLA1 PGR5-LIKE AtFBA7 AtFBA5 AT4G26860 AT4G27700 ATH1 AtGLDP1 ATHDA14 ATLDA AT5G08050 PMDH2 ENH1 ADG2 PGL5 G6PD1 AT5G44520 At-NEET NdhN PSAN ATLFNR1
GO:0006739 NADP metabolic process	BP	4.642e-23	PSAO AVDE1 CRB ATGSTU18 PnsL2 NDF1 AT1G18270 NDF6 LHCA2*1 ATLFNR2 AT1G22630 PRK GAPB FTSH1 AT1G51110 PSAG AT1G65230 CRR23 AT1G76450 AT1G77090 AT2G21530 AT2G21960 PY AT2G43560 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATHM4 MFP1 NDF4 DAC AT3G23700 DEG1 PTAC16 PEX11B AT3G48200 AT3G48420 PPL1 SBPASE AT3G59780 CSP41A PETC APX4 PGR5-LIKE AtFBA7 AtFBA5 AT4G27700 AtGLDP1 ATHDA14 ATLDA AT5G08050 PMDH2 ENH1 ADG2 PGL5 G6PD1 AT5G44520 At-NEET NdhN PSAN ATLFNR1
GO:0046483 heterocycle metabolic process	BP	5.314e-23	AT1G01260 AtD27 PSB27 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT-PHH1 HDG2 BT3 AT1G05805 ARI5 ATNTH2 ATMYB13 HPD OE23 PSAO AVDE1 AtMYB60 AMI1 CRB FHY2 ATMPK1 ATGSTU18 AT1G10585 AT1G10610 ICE2 GAPA-2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. WRKY4 PnsL2 AT1G15970 NDF1 ABA3 AT1G16840 AT1G18270 EPR1 AtMYB47 NDF6 AT1G19000 LHCA2*1 ATRL5 AT1G19660 ATCLH1 BEL10 ATLFNR2 AT1G21060 AT1G22630 ATMYB3 FB BBX15 AT1G26580 AT1G26665 AHK3 SPL11 SPL10 CYCT1;3 AT1G28310 ATVOZ1 AtTRM9 AT1G31920 PRK ATMYC2 GAPB ATCAO Lhca5 DYW1 AT1G49010 BBX17 AT1G49500 ABF1 FTSH1 ATERF3 AT1G51110 AT1G52220 PSAH-2 ANAC019 ALDH7B4 AT-RSH3 AT1G54500 AtTLP18.3 PSAG ATDI19 AT1G56500 AtHEMA1 AT1G60590 ATG8C AT1G62250 AT1G62310 AT1G62660 UBC28 AT1G64680 RPOD1 AT1G65230 AtMYB20 BGLU21 GDPDL2 AT1G67700 CSK ATHPR1 ADO3 BBX27 BBX14 STN7 ANAC029 ATCYCD1;1 ABCB26 CRR23 AT1G70820 ATMYBL2 AT1G71480 TRFL6 AT1G73750 BBX16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATRL6 ATBBD1 BLH3 AT1G75460 encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. GASA1 AT1G76110 AT1G76450 AtHMGR1 AT1G76570 AT1G76580 AGL27 AT1G77090 RAP2.4 BBX22 AT1G78995 ECT8 WRI4 AtLa2 ATXRCC1 AT1G80780 APG2 ATBPC1 AT2G02570 PLP WRKY3 AT2G03390 ALDH6B2 AT2G14910 AtRLP19 AT2G16365 AtTLP2 HBI1 ADO2 AtOZF1 ATGLK1 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AT2G21530 ATGRP7 AT2G21960 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AtRIBA2 AGL22 SCPL8 AHA5 ATCTH AT2G26500 AT2G27290 ALB3 AT2G28810 AT2G29360 PY MAPKKK14 ETC2 TCL2 PSBW ATERF15 BBX25 ATOFP16 ACK2 ATCPL3 AT2G34140 UMAMIT13 FHY1 PDX1L4 ATPDX1.1 AT2G38300 AT2G38800 SNZ PnsL1 ATP5CS AT2G40260 AT2G40620 ACA4 AtSPL9 FBH4 COR15 HLH1 AtPIF4 AT2G43280 ETFQO AT2G43560 AT2G43760 AT2G44730 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHAM1 AGL20 AT2G46250 ARF11 APRR9 AT2G46810 PSAP UPB1 AT2G47890 ATCYP38 ATBCA1 RAD23-3 ATF1 AT3G03990 AIF1 LHCB4.2 ATRAB8E DREB2 AT3G12710 AT3G13000 AT3G13040 AtGRF5 HEME1 ATHM4 ANAC055 UVR3 AT3G15780 ADS3 MFP1 AT3G16220 NDF4 ATEBP ARR1 HCF107 ATCRSH DAC AT3G19030 ABF4 PUT5 JMJ30 PSBTN BBX31 AT3G22440 AT3G23700 AtCHUP1 AT3G26580 GAPA DRB3 LHCB2 DEG1 AFP3 AT-POX ACD1 JK224 AT3G45900 ATMYB48 LUX PTAC16 AT3G47070 PEX11B CDF3 AT3G48200 ATBT2 AT3G48420 ATHAP5A AT3G48900 AtIDD2 BEH1 ATSSL4 ATOFP18 AFC1 SIG3 ATPTR1 LHCA1 PPL1 P5CS2 ATDFD SBPASE AT3G56300 ARR9 AT3G57680 AT3G57800 AT3G59780 HAT3 GATA4 ATHAM2 AT3G61080 ATHB-12 CSP41A OEP6 UNE10 AT4G01460 AT4G03250 PETC AtWRKY42 ATPC1 ATCRY1 APX4 LHCB5 AT4G11570 PSAL AT4G12830 AT4G13040 NYC1 J20 CYP74B2 AtCLA1 FCA encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17810 ATWRKY28 AT4G18740 AT4G18810 ATM4 PGR5-LIKE ATNYE1 AGL19 AT4G23050 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) CHLM ATCBF2 ATCBF3 CGA1 AtFBA7 AtFBA5 BBX28 PORB AT4G27700 CRF4 AT4G28080 AtPHR1 PSAE-1 AtC3H49 AT4G31050 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. AT4G32340 ATSDX1 ATH1 AtGLDP1 ATHDA14 ABF3 AtMYB32 HCF244 AT4G35270 AT4G35810 atbzip14 AT4G36210 BEE2 AtPLT6 AtGBF1 BT5 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT5G01020 AIRP2 LHCB4.1 AT5G01750 AT5G02160 CDL1 APRR7 LCL1 ATLDA AT5G05200 DREB2 HAT14 ATPGIP2 AT5G08050 TCP17 FTRA2 AT5G08415 AT5G08430 PMDH2 KNAT4 AT5G11840 ANAC083 ABAR CCS52B ROXY2 AT5G14970 ATMIXTA AtMYB43 ENH1 RVE1 AtTLP11 NSH3 ATIPT5 ADG2 CHR42 ATHMA8 ATSIG5 PGL5 APRR5 ATBZIP9 ATCOL4 AT5G27730 GME AT5G35170 G6PD1 AT5G35970 CAT3 AT5G38520 AT5G40060 AtRLP54 BEL1 ATUBC8 TZP ATAUX2-11 AT5G44020 ATGLK2 AT5G44260 AT5G44520 ATFKBP13 AMK2 HINT3 At-NEET CRR1 AT5G52660 CLPX thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO PORA BBX29 ATCBL2 AT5G56850 GATA21 ACA8 AHA3 ADO1 ATCOL5 APO2 NdhN AT5G58280 AT5G58800 ATMYB59 APRR3 ATPDX2 OBP4 ATMYB34 PIF7 APRR1 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. CDF1 AT5G63080 BT1 NF-YC4 SHA1 PSAN AT5G64380 AGL31 AGL70 STR16 ATLFNR1 MSP-1 ATHB53 DEAR2 ATBT4 RBCL RPL32
GO:0006098 pentose-phosphate shunt	BP	6.933e-23	PSAO AVDE1 CRB ATGSTU18 PnsL2 NDF1 AT1G18270 NDF6 LHCA2*1 ATLFNR2 AT1G22630 PRK GAPB FTSH1 AT1G51110 AT1G65230 CRR23 AT1G76450 AT1G77090 AT2G21530 AT2G21960 PY AT2G43560 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATHM4 MFP1 NDF4 DAC AT3G23700 DEG1 PTAC16 PEX11B AT3G48200 AT3G48420 PPL1 SBPASE AT3G59780 CSP41A PETC APX4 PGR5-LIKE AtFBA7 AtFBA5 AT4G27700 AtGLDP1 ATHDA14 ATLDA AT5G08050 PMDH2 ENH1 ADG2 PGL5 G6PD1 AT5G44520 At-NEET NdhN PSAN ATLFNR1
GO:0051156 glucose 6-phosphate metabolic process	BP	6.933e-23	PSAO AVDE1 CRB ATGSTU18 PnsL2 NDF1 AT1G18270 NDF6 LHCA2*1 ATLFNR2 AT1G22630 PRK GAPB FTSH1 AT1G51110 AT1G65230 CRR23 AT1G76450 AT1G77090 AT2G21530 AT2G21960 PY AT2G43560 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATHM4 MFP1 NDF4 DAC AT3G23700 DEG1 PTAC16 PEX11B AT3G48200 AT3G48420 PPL1 SBPASE AT3G59780 CSP41A PETC APX4 PGR5-LIKE AtFBA7 AtFBA5 AT4G27700 AtGLDP1 ATHDA14 ATLDA AT5G08050 PMDH2 ENH1 ADG2 PGL5 G6PD1 AT5G44520 At-NEET NdhN PSAN ATLFNR1
GO:0050789 regulation of biological process	BP	7.535e-23	AT1G01260 AT1G02300 FBI1 PSAD-2 PSB27 AT-PHH1 ATGLR3.4 HDG2 BT3 AT1G05805 ATMYB13 OE23 ATF2KP PSAO AVDE1 ACHT4 AtMYB60 AMI1 CRB FHY2 ATMPK1 AT1G10585 AT1G10610 ATSTP1 ATCXXS1 AT1G12120 ICE2 GAPA-2 Encodes protein phosphatase 2A (PP2A) B'theta subunit. Targeted to peroxisomes. Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. WRKY4 PKS2 RHA2A CP24 ABA3 HCF173 ICR1 EPR1 TRM3 AtMYB47 AT1G19000 LHCA2*1 ATRL5 ATCLH1 BEL10 ATLFNR2 ASG5 AT1G21060 UREF ATMYB3 ATRABG3B FB AT1G25275 BBX15 AT1G26665 AHK3 SPL11 SPL10 AT1G27520 CYCT1;3 ABCB14 AT1G28310 AtRLP4 ATVOZ1 AML5 AT1G31920 PRK AT1G32160 LOL1 ATMYC2 AT1G33050 OHP2 APRL4 GAPB ATCAO BBX17 ABF1 ATERF3 AT1G52220 PSAH-2 ANAC019 ATMPK18 ALDH7B4 AT1G54500 AtTLP18.3 PSAG AT1G56220 ATDI19 AtNIK3 ATFD2 AT1G62310 HT1 UBC28 AT1G64370 AT1G64500 RPOD1 AtMYB20 ABA4 CSK AT1G67870 ATHPR1 ADO3 BBX27 BBX14 STN7 ACR4 ARC12 ANAC029 AT-EXP1 AIT1 ATCYCD1;1 JAZ9 ATMYBL2 TRFL6 BBX16 AtRLP14 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATCPK30 JAZ2 ATRL6 ATBBD1 BLH3 AT1G75460 encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. ATCLV1 AT1G76110 ATL8 AtHMGR1 AT1G76580 ATSKP2;2 AGL27 AT1G77090 TAPX RAP2.4 AUF1 BBX22 AT1G78995 PSBR ECT8 AT1G79600 WRI4 AtLa2 ATXRCC1 APG2 ATBPC1 PLP PKS1 WRKY3 ATNRP1 AT2G04700 PGR5 AtRLP19 AT2G16365 AT2G17650 ATMPK7 AtTLP2 HBI1 ADO2 ABX45 AT2G19650 AtOZF1 AT2G20230 ATGLK1 AT2G21530 ATGRP7 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AGL22 AtGRF1 EBF1 ATCTH ELF3 PDF1.2b AR781 PLA CIPK3 AT2G27290 AT2G27500 ALB3 AT2G28810 XBAT31 CXIP4 PY ANTR1 MAPKKK14 ETC2 TCL2 PSBW AT2G31040 ATERF15 BBX25 AT2G31800 ATOFP16 ATGLR3.5 ACK2 ATCPL3 AT2G34140 AT2G35260 AtGRF3 FHY1 AtAUX1 AT2G38300 SNZ RCA ELF4 AT2G40260 AT2G40620 ACA4 AtSPL9 FBH4 COR15 TTL3 MAX2 HLH1 AML2 AtPIF4 AT2G44730 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHAM1 AFO AGL20 ATHH2 ATMPK12 ATBAG6 ARF11 APRR9 AT2G46810 PSAP UPB1 AT2G47880 AT2G47890 ATCYP38 ATBCA1 AT3G01690 ATCOL2 ATF1 ATGID1A AIF1 AT3G05990 A/N-InvC AT3G07310 ATPLC2 ATPK1 LHCB4.2 ATRAB8E DREB2 AT3G12710 AT3G13000 AT3G13040 SRF4 BGAL1 AtGRF5 ATMT3 ATHM4 ANAC055 AT3G15780 ADS3 MFP1 AT3G16220 TCTP ATEBP ARR1 HCF107 CIPK1 AT3G17640 JAI3 DAC AT3G18050 AT3G19030 ABF4 ATPEN2 AT3G19850 JMJ30 PSBTN ATSGP2 CYCP2;1 BBX31 AtCHUP1 ATB' AT3G26240 GAPA DRB3 LHCB2 AT3G28220 AT3G29410 AFP3 ACD1 JK224 ATMYB48 AT3G46370 LUX CDF3 AT3G48200 ATBT2 ATHAP5A ARLA1C SNRK2-2 AtIDD2 BEH1 ATSSL4 AT3G51510 ATOFP18 AFC1 SIG3 LHCA1 PPL1 SBPASE ARR9 ATVLN3 AT3G57680 AT3G57800 ATPIRIN1 AT3G59780 AT3G59940 HAT3 GATA4 (AT)VAP ATHAM2 AT3G60690 ATHB-12 ARFA1E CP12 AT3G62930 AT3G62950 AtTIR1 CSP41A OEP6 UNE10 AT4G01460 AGY1 AT4G03250 PETC AT4G04340 AtWRKY42 ATPC1 ABC1 ATKEA3 ATCRY1 LHCB5 MHK AT4G13040 AtRLP47 AT4G15545 AtCLA1 FCA AT4G16670 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17810 ATWRKY28 ATPP2-A1 ATPCAP1 ATM4 AT4G21650 ORP2A PGR5-LIKE AGL19 AT4G23050 CRR31 CHLM ATCBF2 ATCBF3 ABI1 CGA1 AtFBA7 BBX28 PORB AT4G27450 AT4G27700 PPH1 CRF4 AtPHR1 AtC3H49 AtVPS15 MERI-5 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. ENP AT4G32340 ATSDX1 ATH1 ATCBL10 AtGLDP1 FAB1A ABF3 AT4G34920 AtMYB32 AT4G35270 atbzip14 AT4G36210 AT4G36530 BEE2 AtGBF1 AT4G37560 COP3 BT5 AT4G38690 AT4G39270 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT5G01020 LHCB4.1 ATCIPK14 AT5G02160 CDL1 APRR7 LCL1 AT5G03880 FD-GOGAT PKS4 AT5G05200 DREB2 AT5G05600 CBB3 WCRKC1 HAT14 ATPGIP2 AML4 AT5G08050 TCP17 FTRA2 PMDH2 14-3-3lambda AT5G10650 CBSX3 CIPK5 KNAT4 ANAC083 CCS52B ROXY2 AT5G14210 AT5G14390 BETA AT5G14920 GASA4 ATMIXTA ATCNGC2 ATF2 AtMYB43 RVE1 AT5G18600 AtTLP11 MPK16 AT5G19940 CHR42 ATSIG5 APRR5 ATTTG1 ATBZIP9 ATCOL4 EBF2 BGLU37 AtTGG1 ATGID1C AT5G27950 G6PD1 AT5G38520 BHLH136 AtRLP54 AT5G40450 BEL1 ATUBC8 TZP ATAUX2-11 AT5G43870 ATGLK2 AT5G44260 TAO1 AT5G44530 AT5G44580 SUV2 AT5G45650 CIPK20 ATDOG1 APE2 LON2 AMK2 DIR1 AT5G48790 CAA33 CRR1 AT5G52660 PYL8 AT5G53500 AT5G53900 BBX29 ATCBL2 GATA21 ABI2 ADO1 CIPK21 ATCOL5 XBAT32 SKIP1 APO2 NdhN AT5G58280 AT5G58800 ATMYB59 APRR3 OBP4 ATMYB34 PIF7 APRR1 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. CDF1 AT5G63080 BT1 AT5G63190 NF-YC4 SHA1 PSAN AT5G64460 CLEL AGL31 AGL70 ATRLP57 ATLFNR1 MSP-1 ATHB53 ABA1 DEAR2 CYCD3;2 ATBT4
GO:0009637 response to blue light	BP	8.404e-23	FBI1 AT-PHH1 OE23 CRB FHY2 PKS2 LHCA2*1 FB AB165 PRK OHP2 GAPB AtTLP18.3 ATFD2 CSK ATHPR1 ADO3 JAC1 AT1G76450 AT1G76570 PSBR PKS1 LHCB2 PGR5 RCA LHCB4.2 AT3G19850 GAPA LHCB2 JK224 PTAC16 AT3G47070 LHCA1 ATPIRIN1 CP12 CSP41A ATCRY1 APX4 LHCB5 AT4G15545 PGR5-LIKE CRR31 HCF244 LHCB4.1 FD-GOGAT PKS4 ENH1 ADG2 ATSIG5 G6PD1 RBCS2B APO2
GO:0009058 biosynthetic process	BP	8.530e-23	AT1G01240 AT1G01260 PIP1;3 AtD27 AT1G03520 AT1G03590 ATKAO1 HDG2 BT3 AT1G05805 ATMYB13 ACD31.2 HPD OE23 ATF2KP AT1G07280 ATSMO1 PSAO AVDE1 AtMYB60 AMI1 CRB FHY2 ATMPK1 AT1G10585 AT1G10610 GWD ATCXXS1 AT1G12730 ATUGE1 ICE2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. WRKY4 SBH2 CP24 NDF1 ABA3 HCF173 AT1G16960 EPR1 AtMYB47 NDF6 AT1G19000 LHCA2*1 ATRL5 ATCLH1 AT1G19680 BEL10 ATLFNR2 AT1G21010 AT1G21060 UREF AT1G22630 ATMYB3 FB AOAT1 MENG BBX15 AT1G26665 AHK3 SPL11 SPL10 AT1G27520 CYCT1;3 AT1G28310 ATVOZ1 AT1G29700 PSAK AAE14 PSAF ACBP PRK ATMYC2 AT1G33050 AT1G33110 AT1G35420 GAPB AtcFBP ATCAO BBX17 AT1G49500 ABF1 ATERF3 AT1G51110 ABCG12 PSAH-2 ANAC019 AT1G53400 MAP3KA ATMSRB1 ABCD2 AT1G54500 AtTLP18.3 PSAG UKL3 AT1G55960 ATDI19 AT1G56500 AT1G57770 AtHEMA1 AT1G60010 LHCA3 ATG8C AT1G62310 AT1G62660 UBC28 AT1G64370 AT1G64500 TUA1 RPOD1 AT1G65230 AtMYB20 AT1G66330 AT1G66760 GDPDL2 ABA4 AT1G67700 CSK AT1G67870 ATHPR1 ATTPS6 ADO3 BBX27 BBX14 ANAC029 ATCYCD1;1 ATTPS8 AOAT2 JAZ9 AT1G70820 ATMYBL2 TRFL6 AT1G73655 BBX16 AT1G73920 AT1G73980 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATCPK30 AT1G74910 JAZ2 ATRL6 ATBBD1 BLH3 AT1G75460 encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. GASA1 AT1G76110 AT1G76450 AtHMGR1 AT1G76570 AT1G76580 AT1G76720 AGL27 AT1G77090 GNR1 RAP2.4 BBX22 AT1G78995 PSBR ECT8 WRI4 encodes a glycerate kinase which catalyzes the last step of photorespiration C2 cycle. AT1G80780 APG2 At17.1 AT2G01460 ATBPC1 AT2G02570 PLP AT2G03310 WRKY3 AT2G04690 AT2G04700 AGT AT2G15020 AtRLP19 AT2G16365 ATSERAT3;1 AT2G17650 AtTLP2 HBI1 ATTPS11 ADO2 ABX45 AtOZF1 ATGLK1 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AT2G21530 ATGRP7 ATCAD3 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. ATUBP4 AtRIBA2 AGL22 SQE2 SCPL8 AT2G24280 AHA5 ATCTH PLA AT2G27290 ALB3 AT2G28810 AT2G29300 PY ANTR1 MAPKKK14 ETC2 TCL2 AT2G31040 ATERF15 BBX25 AT2G31810 AT2G32090 ATOFP16 BAM6 ATKAO2 ACK2 ATCPL3 atnudt22 AT2G34140 AT2G34310 AT2G35050 AT2G35260 BE3 AT2G36630 AT2G37585 FHY1 AT2G37840 CAC3 ATLMCO4 AtAUX1 PDX1L4 ATPDX1.1 AT2G38300 SNZ ATMTP11 PnsL1 RCA ATP5CS AT2G40260 ATFER4 Encodes a putative amino acid transporter. AT2G40620 AT2G41060 ACA4 AtSPL9 AT2G42220 FBH4 COR15 ATPPC2 HLH1 AtPIF4 ETFQO AT2G43540 AT2G43560 AT2G43760 AT2G44730 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHAM1 AFO AGL20 ARF11 APRR9 AT2G46810 AtGolS1 UPB1 AT2G47890 AT3G01060 ATCYP38 ATBCA1 AT3G01520 ATPPT2 AT3G01690 ATF1 AT3G03870 AT3G03990 ATGID1A AIF1 AT3G06440 A/N-InvC ATSFR2 ATPK1 LHCB4.2 ATRAB8E AtLCY PAL4 ARAF DREB2 AT3G12320 AT3G13000 AT3G13040 AtGRF5 GOX2 GOX1 ATNCED3 AT3G14595 HEME1 ATMT3 ATHM4 ANAC055 AT3G15570 AT3G15780 ADS3 MFP1 AT3G16220 NDF4 ATEBP ARR1 HCF107 JAI3 DAC AT3G18500 AT3G19030 ABF4 AT3G19480 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. JMJ30 BBX31 XBAT35 AT3G23480 AT3G23700 AtCHUP1 GAPA DEG1 AT3G28220 AFP3 AT-POX AT3G43220 ACD1 JK224 ATMYB48 LUX PTAC16 ATPHS2 ASN1 CAB4 CDF3 AT3G48200 ATBT2 AT3G48420 ATHAP5A ARLA1C AtIDD2 BEH1 ATSSL4 AT3G51510 ATOFP18 AT3G52740 AFC1 SIG3 P5CS2 ATDFD SBPASE AT3G56300 AT3G57020 ARR9 AT3G57170 ATVLN3 AT3G57800 AT3G58640 AT3G59780 AT3G60290 HAT3 GATA4 (AT)VAP ATHAM2 AtPP2-A13 AtSLD1 ATHB-12 ARFA1E CP12 CSP41A OEP6 UNE10 AT4G01460 GATL6 AT4G03250 PETC AtRbcX1 AT4G04340 AtWRKY42 ATPC1 ABC1 AT4G05070 PSBQ APX4 LHCB5 MHK AT4G13040 AT4G15260 CYP74B2 AtCLA1 FCA encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AtBAM3 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17810 ATWRKY28 ATSS4 AT4G18740 CCD4 ATPP2-A1 ATPCAP1 ATM4 PGR5-LIKE AGL19 AT4G23050 CHLM ATCBF2 ATCBF3 ATCNFU3 PSD3 CGA1 AtFBA7 AtFBA5 AT4G26860 BBX28 PORB AT4G27700 CRF4 AT4G28080 AtPHR1 PSAE-1 AtC3H49 AtVPS15 AT4G30690 AT4G31050 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. AT4G31860 AT4G32340 ATSDX1 ATH1 ATCBL10 AtGLDP1 LKR FAB1A ATHDA14 ABF3 KCS16 CLB6 AT4G34920 AT4G34950 AtMYB32 HCF244 AT4G35270 atbzip14 AT4G36210 AT4G36530 BEE2 AtPLT6 AtGBF1 KAI2 BT5 SHM1 ATCAD8 AT4G38690 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT4G39970 AT5G01020 AT5G01260 AT5G01750 AT5G02160 CDL1 APRR7 LCL1 AT5G02940 FD-GOGAT ATSYTC ATLDA AT5G05200 DREB2 AT5G05600 CBB3 HAT14 ATPGIP2 AT5G08050 TCP17 FTRA2 AT5G08415 AT5G08430 PMDH2 14-3-3lambda KNAT4 ANAC083 ABAR CCS52B CARAB-AK-LYS ROXY2 AT5G14120 AT5G14410 BETA AT5G14970 GASA4 ATMIXTA AT5G16240 AtMYB43 RVE1 AT5G18525 AtTLP11 ATIPT5 ADG2 ACL5 AT5G19940 AKINBETA1 ATHMA8 ATSIG5 AT5G24155 APRR5 AT5G24490 ATTTG1 ATBZIP9 ATCOL4 ATGID1C AT5G27950 GME AT5G35170 G6PD1 CAT3 AT5G38520 APE1 AT5G39590 AtRLP54 AT5G40450 AT5G40500 BEL1 ATUBC8 TZP ATAUX2-11 NDH18 AT5G44020 ATGLK2 AT5G44260 AT5G44520 ATFKBP13 APE2 AMK2 ATFRO8 CRR1 EFO1 AT5G52660 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. PORA BBX29 PDC2 ATCBL2 GATA21 ACA8 AHA3 ADO1 CIPK21 ATCOL5 XBAT32 AT5G57785 APO2 NdhN AT5G58280 WNK4 AT5G58800 ATMYB59 APRR3 ATPDX2 OBP4 ATMYB34 PIF7 APRR1 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. CDF1 AT5G62900 AT5G63080 BT1 NF-YC4 SHA1 BGAL6 PSAN AT5G64500 AGL31 AGL70 STR16 ATLFNR1 MSP-1 ATHB53 ABA1 DEAR2 ATBT4 RBCL RPL32
GO:0046496 nicotinamide nucleotide metabolic proces...	BP	1.940e-22	PSAO AVDE1 CRB ATGSTU18 PnsL2 NDF1 AT1G18270 NDF6 LHCA2*1 ATLFNR2 AT1G22630 PRK GAPB FTSH1 AT1G51110 PSAG AT1G65230 CRR23 AT1G76450 AT1G77090 AT2G21530 AT2G21960 PY AT2G43560 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATHM4 MFP1 NDF4 DAC AT3G23700 DEG1 PTAC16 PEX11B AT3G48200 AT3G48420 PPL1 SBPASE AT3G59780 CSP41A PETC APX4 PGR5-LIKE AtFBA7 AtFBA5 AT4G27700 AtGLDP1 ATHDA14 ATLDA AT5G08050 PMDH2 ENH1 ADG2 PGL5 G6PD1 AT5G44520 At-NEET NdhN PSAN ATLFNR1
GO:0009657 plastid organization	BP	2.143e-22	PSB27 OE23 PSAO CRB GAPA-2 ATLFNR2 PRK AtLrgB GAPB AT1G44000 Lhca5 AT1G51110 AT1G52220 PSAH-2 AtTLP18.3 AT1G56500 MSL3 AT1G64500 AT1G65230 PTAC4 AT1G67700 ATHPR1 ARC12 JAC1 AT1G76450 TAPX BBX22 APG2 AT2G16365 ATGLK1 AT2G21530 AT2G26500 ALB3 MAPKKK14 PSBW ATFER4 AT2G43560 AFO PSAP ATCYP38 ATCOL2 ATHM4 MFP1 HCF107 DAC PSBTN AT3G23700 AtCHUP1 GAPA ACD1 JK224 PTAC16 AT3G47070 AT3G48200 AT3G48420 ATSSL4 PPL1 SBPASE PPD6 CSP41A AGY1 PETC ATPC1 PSAL AT4G17810 PGR5-LIKE ATCNFU3 PSAE-1 ATH1 ATHDA14 STY46 FD-GOGAT AT5G08050 PMDH2 AT5G13770 ENH1 ADG2 ATSIG5 AT5G38520 NDH18 ATGLK2 CAA33 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. CDF1 ATLFNR1 MSP-1
GO:0019362 pyridine nucleotide metabolic process	BP	3.088e-22	PSAO AVDE1 CRB ATGSTU18 PnsL2 NDF1 AT1G18270 NDF6 LHCA2*1 ATLFNR2 AT1G22630 PRK GAPB FTSH1 AT1G51110 PSAG AT1G65230 CRR23 AT1G76450 AT1G77090 AT2G21530 AT2G21960 PY AT2G43560 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATHM4 MFP1 NDF4 DAC AT3G23700 DEG1 PTAC16 PEX11B AT3G48200 AT3G48420 PPL1 SBPASE AT3G59780 CSP41A PETC APX4 PGR5-LIKE AtFBA7 AtFBA5 AT4G27700 AtGLDP1 ATHDA14 ATLDA AT5G08050 PMDH2 ENH1 ADG2 PGL5 G6PD1 AT5G44520 At-NEET NdhN PSAN ATLFNR1
GO:0006364 rRNA processing	BP	3.292e-22	PSB27 OE23 PSAO AVDE1 CRB GAPA-2 NDF6 LHCA2*1 ATLFNR2 PRK GAPB Lhca5 AT1G52220 PSAH-2 AtTLP18.3 AT1G67700 ATHPR1 AT1G76450 APG2 ATGLK1 AT2G21530 AT2G26500 ALB3 PSBW AT2G43560 PSAP ATCYP38 LHCB4.2 HCF107 PSBTN AT3G23700 AtCHUP1 GAPA LHCB2 PTAC16 AT3G47070 LHCA1 PPL1 SBPASE CSP41A PETC ATPC1 APX4 LHCB5 PSAL PGR5-LIKE CHLM PSAE-1 HCF244 LHCB4.1 PMDH2 ENH1 ADG2 AT5G38520 ATGLK2 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. ATLFNR1 MSP-1
GO:0016072 rRNA metabolic process	BP	3.292e-22	PSB27 OE23 PSAO AVDE1 CRB GAPA-2 NDF6 LHCA2*1 ATLFNR2 PRK GAPB Lhca5 AT1G52220 PSAH-2 AtTLP18.3 AT1G67700 ATHPR1 AT1G76450 APG2 ATGLK1 AT2G21530 AT2G26500 ALB3 PSBW AT2G43560 PSAP ATCYP38 LHCB4.2 HCF107 PSBTN AT3G23700 AtCHUP1 GAPA LHCB2 PTAC16 AT3G47070 LHCA1 PPL1 SBPASE CSP41A PETC ATPC1 APX4 LHCB5 PSAL PGR5-LIKE CHLM PSAE-1 HCF244 LHCB4.1 PMDH2 ENH1 ADG2 AT5G38520 ATGLK2 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. ATLFNR1 MSP-1
GO:0044765 single-organism transport	BP	3.541e-22	PIP1;3 ATKEA1 SEC1A PSAD-2 ATGLR3.4 ARI5 BBX24 OE23 PSAO CRB ATMPK1 AT1G10585 ATSTP1 ATBETAFRUCT4 ATCCS Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PKS2 CP24 ATSYP51 ABA3 HCF173 AT1G16840 ICR1 NDF6 LHCA2*1 ATCLH1 ATLFNR2 AtCOR47 HMG AT1G21010 GLTP2 BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B. AT1G22570 AOAT1 ATVTI12 AT1G26930 AHK3 ABCB14 AML5 PSAK ATPUP4 ACBP PRK AtLrgB AT1G32160 ATMYC2 AT1G33110 OHP2 ATGLR3.3 GAPB ANAC019 AT1G53400 MSL4 GLIP5 ABCD2 PSAG AT1G56210 ATDI19 CAT2 MSL3 AT1G60010 ATFD2 AT1G62510 AT1G62660 UBC28 AT1G64370 RPOD1 AT1G66760 CSK AT1G67870 BBX14 AT1G68570 AIT1 KUP6 ABCB26 CRR23 AT1G71480 PATL1 AT1G74730 JAZ2 AT1G75460 AT1G76110 AtHMGR1 AT1G76530 AtSTP14 AUF1 AT1G78560 BBX22 PSBR AtGABP PLP PKS1 PGR5 AGT LTP AtRLP19 MCA2 ADO2 PSAE-2 ATGLK1 ATGRP7 AGL22 AT2G24240 AHA5 AR781 PLA AT2G27500 ALB3 ATOEP16-1 CXIP4 ANTR1 ABCG31 KUP11 AT2G35260 SAMTL ATPROT3 PIP2;2 AtAUX1 AT2G38330 ATIREG1 ATMTP11 RCA ATFER4 Encodes a putative amino acid transporter. ACA4 COR15 MAX2 AtPIF4 ATINT1 ATSAGT1 AGL20 ATHH2 ATI1 AT2G46320 AT2G46690 ROPGAP3 AT2G48020 ATCYP38 ATBCA1 ATPPT2 AT3G03990 AT3G05160 AIF1 RCI2A AT3G06130 ATPDHK LHCB4.2 ANT1 ATMT3 ANAC055 AQP1 NDF4 ARR1 AT3G19030 ATPEN2 PUT5 AT3G19850 bHLH121 AT3G21390 AT3G21670 ATSGP2 AT3G22440 GAPA CCL LHCB2 JK224 ADF2 AT3G47070 CAB4 SNRK2-2 AtIDD2 ATSSL4 AT3G51730 AT3G51760 ACX4 BGAL2 NAKR3 ATPTR1 LHCA1 ABCG19 SBPASE ATJRG21 ATVLN3 MGT6 ATPIRIN1 (AT)VAP AT3G61010 ATPIP1 CP12 AGY1 PETC ATRMA1 ATPC1 ATKEA3 PSBQ ATPUP13 ATCRY1 LHCB5 PSAL ATHAK5 AtRLP47 AT4G15545 AtCLA1 AT4G15610 ATINT4 AT4G16490 AT4G16680 DELTA-TIP2 ATWRKY28 ATPUP10 ATPP2-A1 AT4G19860 ATPCAP1 ATM4 Encodes a Protease inhibitor/seed storage/LTP family protein AT4G22990 AT4G23050 PIP1;5 CRR31 CHLM ABI1 CRF4 AtVPS15 ENP ATSDX1 GAMMA-VPE ATCBL10 AT4G33550 AtPLT6 ATCAD8 RD19 SHL1 LAX1 LHCB4.1 ATFER1 AT5G01750 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. AT5G01990 AT5G02160 AT5G02180 UBQ3 FD-GOGAT ABCG22 ATPGIP2 PMDH2 CBSX3 ANAC083 AT5G14120 BETA AT5G14880 ER-ANT1 AT5G18590 ACL5 AT5G19940 AT5G19970 PHT4;5 ATGER3 ATHMA8 ATTTG1 ATCOL4 AT5G26200 ATIREG3 AT5G27290 SFP2 AT5G27950 G6PD1 CAT3 AT5G39590 AtRLP54 AT5G40450 ATCLC-A NDH18 AT5G44020 APE2 LON2 AT5G47330 AMK2 DIR1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO FIP2 ATCBL2 ACA8 AHA3 ADO1 APO2 COPT1 AT5G59250 LTP3 ATEXO70H7 APC1 AT5G62350 SHA1 ATOPT4 AT5G64500 CLEL ATLFNR1 MSP-1
GO:1902578 single-organism localization	BP	4.146e-22	PIP1;3 ATKEA1 SEC1A PSAD-2 ATGLR3.4 ARI5 BBX24 OE23 PSAO CRB ATMPK1 AT1G10585 ATSTP1 ATBETAFRUCT4 ATCCS Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PKS2 CP24 ATSYP51 ABA3 HCF173 AT1G16840 ICR1 NDF6 LHCA2*1 ATCLH1 ATLFNR2 AtCOR47 HMG AT1G21010 GLTP2 BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B. AT1G22570 AOAT1 ATVTI12 AT1G26930 AHK3 ABCB14 AML5 PSAK ATPUP4 ACBP PRK AtLrgB AT1G32160 ATMYC2 AT1G33110 OHP2 ATGLR3.3 GAPB ANAC019 AT1G53400 MSL4 GLIP5 ABCD2 PSAG AT1G56210 ATDI19 CAT2 MSL3 AT1G60010 ATFD2 AT1G62510 AT1G62660 UBC28 AT1G64370 RPOD1 AT1G66760 CSK AT1G67870 BBX14 AT1G68570 AIT1 KUP6 ABCB26 CRR23 AT1G71480 PATL1 AT1G74730 JAZ2 AT1G75460 AT1G76110 AtHMGR1 AT1G76530 AtSTP14 AUF1 AT1G78560 BBX22 PSBR AtGABP PLP PKS1 PGR5 AGT LTP AtRLP19 MCA2 ADO2 PSAE-2 ATGLK1 ATGRP7 AGL22 AT2G24240 AHA5 AR781 PLA AT2G27500 ALB3 ATOEP16-1 CXIP4 ANTR1 ABCG31 KUP11 AT2G35260 SAMTL ATPROT3 PIP2;2 FHY1 AtAUX1 AT2G38330 ATIREG1 ATMTP11 RCA ATFER4 Encodes a putative amino acid transporter. ACA4 COR15 MAX2 AtPIF4 ATINT1 ATSAGT1 AGL20 ATHH2 ATI1 AT2G46320 AT2G46690 ROPGAP3 AT2G48020 ATCYP38 ATBCA1 ATPPT2 AT3G03990 AT3G05160 AIF1 RCI2A AT3G06130 ATPDHK LHCB4.2 ANT1 ATMT3 ANAC055 AQP1 NDF4 ARR1 AT3G19030 ATPEN2 PUT5 AT3G19850 bHLH121 AT3G21390 AT3G21670 ATSGP2 AT3G22440 GAPA CCL LHCB2 JK224 ADF2 AT3G47070 CAB4 SNRK2-2 AtIDD2 ATSSL4 AT3G51730 AT3G51760 ACX4 BGAL2 NAKR3 ATPTR1 LHCA1 ABCG19 SBPASE ATJRG21 ATVLN3 MGT6 ATPIRIN1 (AT)VAP AT3G61010 ATPIP1 CP12 AGY1 PETC ATRMA1 ATPC1 ATKEA3 PSBQ ATPUP13 ATCRY1 LHCB5 PSAL ATHAK5 AtRLP47 AT4G15545 AtCLA1 AT4G15610 ATINT4 AT4G16490 AT4G16680 DELTA-TIP2 ATWRKY28 ATPUP10 ATPP2-A1 AT4G19860 ATPCAP1 ATM4 Encodes a Protease inhibitor/seed storage/LTP family protein AT4G22990 AT4G23050 PIP1;5 CRR31 CHLM ABI1 CRF4 AtVPS15 ENP ATSDX1 GAMMA-VPE ATCBL10 AT4G33550 AtPLT6 ATCAD8 RD19 SHL1 LAX1 LHCB4.1 ATFER1 AT5G01750 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. AT5G01990 AT5G02160 AT5G02180 UBQ3 FD-GOGAT ABCG22 ATPGIP2 PMDH2 CBSX3 ANAC083 AT5G14120 BETA AT5G14880 ER-ANT1 AT5G18590 ACL5 AT5G19940 AT5G19970 PHT4;5 ATGER3 ATHMA8 ATTTG1 ATCOL4 AT5G26200 ATIREG3 AT5G27290 SFP2 AT5G27950 G6PD1 CAT3 AT5G39590 AtRLP54 AT5G40450 ATCLC-A NDH18 AT5G44020 APE2 LON2 AT5G47330 AMK2 DIR1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO FIP2 ATCBL2 ACA8 AHA3 ADO1 APO2 COPT1 AT5G59250 LTP3 ATEXO70H7 APC1 AT5G62350 SHA1 ATOPT4 AT5G64500 CLEL ATLFNR1 MSP-1
GO:0015996 chlorophyll catabolic process	BP	6.856e-22	encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT1G16840 ATCLH1 AHK3 ALDH7B4 AT1G62250 STN7 ABCB26 AT1G71480 AT1G73750 AT1G76570 ALDH6B2 AT2G14910 AtOZF1 AT2G38800 AT3G13040 PUT5 AT3G26580 DEG1 ACD1 AT3G45900 ATPTR1 AT3G57680 AT3G61080 AT4G11570 NYC1 J20 ATNYE1 AIRP2 ATLDA AT5G05200 AT5G11840 AT5G14970 AT5G35970 CLPX AtHGO
GO:0006725 cellular aromatic compound metabolic pro...	BP	7.119e-22	AT1G01260 PSB27 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT-PHH1 HDG2 BT3 AT1G05805 ARI5 ATNTH2 ATMYB13 HPD OE23 PSAO AVDE1 AtMYB60 AMI1 CRB FHY2 ATMPK1 ATGSTU18 AT1G10585 AT1G10610 ICE2 GAPA-2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. WRKY4 PnsL2 AT1G15970 NDF1 ABA3 AT1G16840 AT1G18270 EPR1 AtMYB47 NDF6 AT1G19000 LHCA2*1 ATRL5 AT1G19660 ATCLH1 BEL10 ATLFNR2 AT1G21060 AT1G22630 ATMYB3 FB BBX15 AT1G26580 AT1G26665 AHK3 SPL11 SPL10 CYCT1;3 AT1G28310 ATVOZ1 AtTRM9 AT1G31920 PRK ATMYC2 GAPB ATCAO Lhca5 DYW1 AT1G49010 BBX17 AT1G49500 ABF1 FTSH1 NTMC2T5.1 ATERF3 AT1G51110 AT1G52220 PSAH-2 ANAC019 ALDH7B4 AT-RSH3 AT1G54500 AtTLP18.3 PSAG ATDI19 AT1G56500 AtHEMA1 AT1G60590 ATG8C AT1G62250 AT1G62310 AT1G62660 UBC28 AT1G64680 RPOD1 AT1G65230 AtMYB20 BGLU21 GDPDL2 AT1G67700 CSK ATHPR1 ADO3 BBX27 BBX14 STN7 ANAC029 ATCYCD1;1 ABCB26 CRR23 AT1G70820 ATMYBL2 AT1G71480 TRFL6 AT1G73750 BBX16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATRL6 ATBBD1 BLH3 AT1G75460 encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. GASA1 AT1G76110 AT1G76450 AtHMGR1 AT1G76570 AT1G76580 AGL27 AT1G77090 RAP2.4 BBX22 AT1G78995 ECT8 WRI4 AtLa2 ATXRCC1 AT1G80780 APG2 ATBPC1 AT2G02570 PLP WRKY3 AT2G03390 ALDH6B2 AT2G14910 AtRLP19 AT2G16365 AtTLP2 HBI1 ADO2 AtOZF1 ATGLK1 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AT2G21530 ATGRP7 ATCAD3 AT2G21960 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AGL22 SCPL8 AHA5 ATCTH AT2G26500 PLA AT2G27290 ALB3 AT2G28810 AT2G29360 PY ANTR1 MAPKKK14 ETC2 TCL2 PSBW ATERF15 BBX25 ATOFP16 ACK2 ATCPL3 AT2G34140 UMAMIT13 FHY1 ATLMCO4 PDX1L4 ATPDX1.1 AT2G38300 AT2G38800 SNZ PnsL1 RCA AT2G40260 AT2G40620 ACA4 AT2G41705 AtSPL9 FBH4 COR15 HLH1 AtPIF4 AT2G43280 ETFQO AT2G43560 ATSAGT1 AT2G44730 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHAM1 AGL20 AT2G46250 ARF11 APRR9 AT2G46810 PSAP UPB1 AT2G47890 ATCYP38 ATBCA1 RAD23-3 ATF1 AT3G03990 AT3G04000 AIF1 LHCB4.2 ATRAB8E PAL4 DREB2 AT3G12710 AT3G13000 AT3G13040 AtGRF5 HEME1 ATHM4 ANAC055 UVR3 AT3G15780 ADS3 MFP1 AT3G16220 NDF4 ATEBP ARR1 HCF107 ATCRSH DAC AT3G19030 ABF4 PUT5 JMJ30 PSBTN BBX31 AT3G22440 AT3G23700 AtCHUP1 AT3G26580 GAPA DRB3 LHCB2 DEG1 AFP3 ACD1 JK224 AT3G45900 ATMYB48 LUX PTAC16 AT3G47070 PEX11B CDF3 AT3G48200 ATBT2 AT3G48420 ATHAP5A AT3G48900 AtIDD2 BEH1 ATSSL4 ATOFP18 AFC1 SIG3 ATPTR1 LHCA1 PPL1 ATDFD SBPASE AT3G56300 ARR9 AT3G57680 AT3G57800 AT3G59780 HAT3 GATA4 ATHAM2 AT3G61080 ATHB-12 CSP41A OEP6 UNE10 AT4G01460 AT4G03250 PETC AtWRKY42 ATPC1 ATCRY1 APX4 LHCB5 AT4G11570 PSAL AT4G12830 AT4G13040 NYC1 J20 CYP74B2 AtCLA1 FCA encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17810 ATWRKY28 AT4G18740 AT4G18810 ATM4 PGR5-LIKE ATNYE1 AGL19 AT4G23050 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) CHLM ATCBF2 ATCBF3 CGA1 AtFBA7 AtFBA5 BBX28 PORB AT4G27700 CRF4 AT4G28080 AtPHR1 PSAE-1 AtC3H49 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. AT4G32340 ATSDX1 ATH1 AtGLDP1 ATHDA14 ABF3 AtMYB32 HCF244 AT4G35270 atbzip14 AT4G36210 BEE2 AtPLT6 AtGBF1 ATMES9 BT5 SHM1 ATCAD8 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT5G01020 AIRP2 LHCB4.1 AT5G01750 AT5G02160 CDL1 APRR7 LCL1 FD-GOGAT ATLDA AT5G05200 DREB2 HAT14 ATPGIP2 AT5G08050 TCP17 FTRA2 AT5G08430 PMDH2 KNAT4 AT5G11840 ANAC083 ABAR CCS52B ROXY2 BETA AT5G14970 ATMIXTA AtMYB43 ENH1 RVE1 AtTLP11 NSH3 ATIPT5 ADG2 CHR42 ATHMA8 ATSIG5 PGL5 APRR5 ATBZIP9 ATCOL4 AT5G25770 AT5G27730 GME AT5G35170 G6PD1 AT5G35970 CAT3 AT5G38520 AT5G40060 AtRLP54 BEL1 ATUBC8 TZP ATAUX2-11 AT5G44020 ATGLK2 AT5G44260 AT5G44520 ATFKBP13 AMK2 HINT3 At-NEET CRR1 AT5G52660 CLPX thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO PORA BBX29 ATCBL2 AT5G56850 GATA21 ACA8 AHA3 ADO1 ATCOL5 APO2 NdhN AT5G58280 AT5G58800 ATMYB59 APRR3 ATPDX2 OBP4 ATMYB34 PIF7 APRR1 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. CDF1 AT5G63080 BT1 NF-YC4 SHA1 PSAN AT5G64250 AT5G64380 AGL31 AGL70 STR16 ATLFNR1 MSP-1 ATHB53 DEAR2 ATBT4 RBCL RPL32
GO:0010114 response to red light	BP	7.823e-22	OE23 CRB FHY2 LHCA2*1 AB165 PRK OHP2 GAPB AtTLP18.3 ATFD2 ATHPR1 AT-EXP1 AT1G76450 PSBR PKS1 LHCB2 PGR5 CYP707A2 RCA ELF4 AtPIF4 LHCB4.2 GAPA LHCB2 JK224 PTAC16 AT3G47070 LHCA1 ATPOB1 CP12 CSP41A APX4 LHCB5 PGR5-LIKE HCF244 LHCB4.1 FD-GOGAT ENH1 ADG2 ATSIG5 APRR5 RBCS2B EFO1 ADO1 ABA1
GO:0010218 response to far red light	BP	1.876e-21	OE23 CRB FHY2 LHCA2*1 FB AB165 PRK OHP2 GAPB AtTLP18.3 ATFD2 ATHPR1 AT1G76450 AT1G76570 PSBR PKS1 LHCB2 PGR5 FHY1 AtAUX1 RCA ROPGAP3 LHCB4.2 GAPA LHCB2 JK224 PTAC16 AT3G47070 LHCA1 CP12 CSP41A APX4 LHCB5 PGR5-LIKE HCF244 LHCB4.1 FD-GOGAT ENH1 ADG2 ACL5 ATSIG5 APRR5 RBCS2B EFO1
GO:0046149 pigment catabolic process	BP	1.893e-21	encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT1G16840 ATCLH1 AHK3 ALDH7B4 AT1G62250 STN7 ABCB26 AT1G71480 AT1G73750 AT1G76570 ALDH6B2 AT2G14910 AtOZF1 AT2G38800 AT3G13040 PUT5 AT3G26580 DEG1 ACD1 AT3G45900 ATPTR1 AT3G57680 AT3G61080 AT4G11570 NYC1 J20 ATNYE1 AIRP2 ATLDA AT5G05200 AT5G11840 AT5G14970 AT5G35970 CLPX AtHGO
GO:1901576 organic substance biosynthetic process	BP	1.999e-21	AT1G01240 AT1G01260 PIP1;3 AtD27 AT1G03520 AT1G03590 ATKAO1 HDG2 BT3 AT1G05805 ATMYB13 ACD31.2 HPD OE23 ATF2KP AT1G07280 ATSMO1 PSAO AVDE1 AtMYB60 AMI1 CRB FHY2 ATMPK1 AT1G10585 AT1G10610 GWD ATCXXS1 AT1G12730 ATUGE1 ICE2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. WRKY4 SBH2 CP24 NDF1 ABA3 HCF173 AT1G16960 EPR1 AtMYB47 NDF6 AT1G19000 LHCA2*1 ATRL5 ATCLH1 AT1G19680 BEL10 ATLFNR2 AT1G21010 AT1G21060 UREF AT1G22630 ATMYB3 FB AOAT1 MENG BBX15 AT1G26665 AHK3 SPL11 SPL10 AT1G27520 CYCT1;3 AT1G28310 ATVOZ1 AT1G29700 PSAK AAE14 PSAF ACBP PRK ATMYC2 AT1G33050 AT1G33110 AT1G35420 GAPB AtcFBP ATCAO BBX17 AT1G49500 ABF1 ATERF3 AT1G51110 PSAH-2 ANAC019 AT1G53400 MAP3KA ATMSRB1 ABCD2 AT1G54500 AtTLP18.3 PSAG UKL3 AT1G55960 ATDI19 AT1G56500 AT1G57770 AtHEMA1 AT1G60010 LHCA3 ATG8C AT1G62310 AT1G62660 UBC28 AT1G64370 AT1G64500 TUA1 RPOD1 AT1G65230 AtMYB20 AT1G66330 AT1G66760 GDPDL2 ABA4 AT1G67700 CSK AT1G67870 ATHPR1 ATTPS6 ADO3 BBX27 BBX14 ANAC029 ATCYCD1;1 ATTPS8 AOAT2 JAZ9 AT1G70820 ATMYBL2 TRFL6 AT1G73655 BBX16 AT1G73920 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATCPK30 JAZ2 ATRL6 ATBBD1 BLH3 AT1G75460 encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. GASA1 AT1G76110 AT1G76450 AtHMGR1 AT1G76570 AT1G76580 AT1G76720 AGL27 AT1G77090 RAP2.4 BBX22 AT1G78995 PSBR ECT8 WRI4 AT1G80780 APG2 At17.1 AT2G01460 ATBPC1 AT2G02570 PLP AT2G03310 WRKY3 AT2G04690 AT2G04700 AT2G15020 AtRLP19 AT2G16365 ATSERAT3;1 AT2G17650 AtTLP2 HBI1 ATTPS11 ADO2 ABX45 AtOZF1 ATGLK1 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AT2G21530 ATGRP7 ATCAD3 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. ATUBP4 AtRIBA2 AGL22 SQE2 SCPL8 AT2G24280 AHA5 ATCTH PLA AT2G27290 ALB3 AT2G28810 AT2G29300 PY ANTR1 MAPKKK14 ETC2 TCL2 AT2G31040 ATERF15 BBX25 AT2G31810 AT2G32090 ATOFP16 BAM6 ATKAO2 ACK2 ATCPL3 atnudt22 AT2G34140 AT2G34310 AT2G35050 AT2G35260 BE3 AT2G36630 AT2G37585 FHY1 AT2G37840 CAC3 ATLMCO4 AtAUX1 PDX1L4 ATPDX1.1 AT2G38300 SNZ ATMTP11 PnsL1 RCA ATP5CS AT2G40260 Encodes a putative amino acid transporter. AT2G40620 AT2G41060 ACA4 AtSPL9 AT2G42220 FBH4 COR15 ATPPC2 HLH1 AtPIF4 ETFQO AT2G43540 AT2G43560 AT2G43760 AT2G44730 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHAM1 AGL20 ARF11 APRR9 AT2G46810 AtGolS1 UPB1 AT2G47890 AT3G01060 ATCYP38 ATBCA1 AT3G01520 ATPPT2 AT3G01690 ATF1 AT3G03870 AT3G03990 ATGID1A AIF1 AT3G06440 A/N-InvC ATSFR2 ATPK1 LHCB4.2 ATRAB8E AtLCY PAL4 ARAF DREB2 AT3G12320 AT3G13000 AT3G13040 AtGRF5 ATNCED3 AT3G14595 HEME1 ATMT3 ATHM4 ANAC055 AT3G15570 AT3G15780 ADS3 MFP1 AT3G16220 NDF4 ATEBP ARR1 HCF107 JAI3 DAC AT3G18500 AT3G19030 ABF4 AT3G19480 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. JMJ30 BBX31 XBAT35 AT3G23480 AT3G23700 AtCHUP1 GAPA DEG1 AT3G28220 AFP3 AT-POX AT3G43220 ACD1 JK224 ATMYB48 LUX PTAC16 ATPHS2 ASN1 CAB4 CDF3 AT3G48200 ATBT2 AT3G48420 ATHAP5A ARLA1C AtIDD2 BEH1 ATSSL4 AT3G51510 ATOFP18 AT3G52740 AFC1 SIG3 P5CS2 ATDFD SBPASE AT3G56300 AT3G57020 ARR9 AT3G57170 ATVLN3 AT3G57800 AT3G58640 AT3G59780 HAT3 GATA4 (AT)VAP ATHAM2 AtPP2-A13 AtSLD1 ATHB-12 ARFA1E CP12 CSP41A OEP6 UNE10 AT4G01460 GATL6 AT4G03250 PETC AtRbcX1 AT4G04340 AtWRKY42 ATPC1 AT4G05070 APX4 LHCB5 MHK AT4G13040 AT4G15260 CYP74B2 AtCLA1 FCA encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AtBAM3 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17810 ATWRKY28 ATSS4 AT4G18740 CCD4 ATPP2-A1 ATPCAP1 ATM4 PGR5-LIKE AGL19 AT4G23050 CHLM ATCBF2 ATCBF3 PSD3 CGA1 AtFBA7 AtFBA5 AT4G26860 BBX28 PORB AT4G27700 CRF4 AT4G28080 AtPHR1 PSAE-1 AtC3H49 AtVPS15 AT4G30690 AT4G31050 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. AT4G31860 AT4G32340 ATSDX1 ATH1 ATCBL10 AtGLDP1 ATHDA14 ABF3 KCS16 CLB6 AT4G34920 AT4G34950 AtMYB32 HCF244 AT4G35270 atbzip14 AT4G36210 AT4G36530 BEE2 AtPLT6 AtGBF1 KAI2 BT5 SHM1 ATCAD8 AT4G38690 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT4G39970 AT5G01020 AT5G01260 AT5G01750 AT5G02160 CDL1 APRR7 LCL1 AT5G02940 FD-GOGAT ATSYTC ATLDA AT5G05200 DREB2 AT5G05600 CBB3 HAT14 ATPGIP2 AT5G08050 TCP17 FTRA2 AT5G08415 AT5G08430 PMDH2 14-3-3lambda KNAT4 ANAC083 ABAR CCS52B CARAB-AK-LYS ROXY2 AT5G14120 AT5G14410 BETA AT5G14970 GASA4 ATMIXTA AT5G16240 AtMYB43 RVE1 AT5G18525 AtTLP11 ADG2 ACL5 AT5G19940 AKINBETA1 ATHMA8 ATSIG5 AT5G24155 APRR5 AT5G24490 ATTTG1 ATBZIP9 ATCOL4 ATGID1C AT5G27950 GME AT5G35170 G6PD1 CAT3 AT5G38520 APE1 AT5G39590 AtRLP54 AT5G40450 AT5G40500 BEL1 ATUBC8 TZP ATAUX2-11 NDH18 AT5G44020 ATGLK2 AT5G44260 AT5G44520 ATFKBP13 APE2 AMK2 ATFRO8 CRR1 EFO1 AT5G52660 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. PORA BBX29 PDC2 ATCBL2 GATA21 ACA8 AHA3 ADO1 CIPK21 ATCOL5 XBAT32 AT5G57785 APO2 NdhN AT5G58280 WNK4 AT5G58800 ATMYB59 APRR3 ATPDX2 OBP4 ATMYB34 PIF7 APRR1 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. CDF1 AT5G62900 AT5G63080 BT1 NF-YC4 SHA1 PSAN AT5G64500 AGL31 AGL70 STR16 ATLFNR1 MSP-1 ATHB53 ABA1 DEAR2 ATBT4 RBCL RPL32
GO:1901575 organic substance catabolic process	BP	2.643e-21	MCCA encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase ARI5 BBX24 FTSH8 AVDE1 THA1 ATMPK1 ATGSTU18 AMSH2 GWD GAPA-2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. ABA3 AT1G16840 AT1G18270 ATCLH1 AtCOR47 HMG HMGB3 AT1G21670 AT1G21680 BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B. AOAT1 AT1G26580 AHK3 AML5 AT1G33700 AT5P1 GAPB AtcFBP AT1G49500 FTSH1 AT1G53780 ESP ALDH7B4 UKL3 CAT2 AT1G62250 AT1G62660 UBC5 UBC28 TUA1 ATHPR1 ADO3 AT1G68660 STN7 ABCB26 AT1G71480 AT1G71710 PATL1 TRFL6 AT1G73750 GASA1 AT1G76570 ATSKP2;2 ALDH5F1 ALDH6B2 AT2G14910 ADO2 MIOX2 AtOZF1 ATGRP7 ATUBP4 SCPL8 EBF1 AtGLDP2 GLX2-5 AT2G31810 CVL1 BAM6 ACK2 BE3 ATLMCO4 AT2G38800 DVL11 MAX2 ETFQO ATHH2 RAD23-3 RCI2A PAL4 ARAF AT3G13040 HEME1 ATHM4 MFP1 ARR1 PUT5 bHLH121 ABCG15 AT3G22440 AT3G26580 GAPA DEG1 AT-POX AT3G43220 ACD1 ATIVD AT3G45900 ASN1 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. SNRK2-2 AT3G51730 ACX4 BGAL2 ATPTR1 AtSIP2 AT3G57680 AT3G61080 ATPIP1 AtSLD1 AtTIR1 AT3G63240 UBQ14 ATRMA1 ATPC1 AT4G11570 PLDGAMMA2 NYC1 J20 CYP74B2 AtCLA1 AtBAM3 ATSS4 AT4G19860 PGR5-LIKE ATNYE1 PIP1;5 ATTRE1 BGAL12 AtFBA7 AtFBA5 AtVPS15 AT4G31050 ATH1 AtGLDP1 LKR UBC17 AtPLT6 SHM1 RD19 SHL1 AIRP2 AT5G01750 UPL4 UBQ3 ATLDA AT5G05200 PMDH2 14-3-3lambda CBSX3 AT5G11840 CCS52B MPL1 BETA AT5G14970 AT5G18600 NSH3 A/N-InvE EBF2 BGLU37 AtTGG1 AT5G35970 CAT3 ATUBC8 AT5G44520 LON2 UBC10 CLPX AT5G53360 AtHGO PDC2 BAM4 BGAL4 ADO1 XBAT32 ftsh9 AT5G62350 AT5G64500 ATBXL4 STR16
GO:0051234 establishment of localization	BP	7.617e-21	PIP1;3 ATKEA1 SEC1A PSAD-2 ATGLR3.4 ARI5 BBX24 OE23 PSAO CRB ATMPK1 AT1G10585 ATSTP1 AT1G12120 ATBETAFRUCT4 ATCCS Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PKS2 AT1G14820 CP24 ATSYP51 ABA3 HCF173 AT1G16840 ICR1 NDF6 LHCA2*1 AT1G19650 ATCLH1 ATLFNR2 AtCOR47 HMG AT1G21010 GLTP2 BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B. AT1G22570 ATRABG3B AOAT1 ATVTI12 AT1G26930 AHK3 ABCB14 AML5 PSAK ATPUP4 ACBP PRK AtLrgB AT1G32160 ATMYC2 AT1G33110 OHP2 ATGLR3.3 GAPB AT1G50970 ANAC019 AT1G53400 MSL4 GLIP5 ABCD2 PSAG AT1G56210 ATDI19 AT1G56500 CAT2 MSL3 AT1G60010 ATFD2 AT1G62510 AT1G62660 UBC28 AT1G64370 AT1G64500 RPOD1 AT1G65230 AT1G66760 AT1G67700 CSK AT1G67870 BBX14 AT1G68570 AIT1 KUP6 ABCB26 CRR23 AT1G71480 PATL1 AT1G74730 JAZ2 JAC1 AT1G75460 AT1G76110 AT1G76450 AtHMGR1 AT1G76530 AtSTP14 AUF1 AT1G78560 BBX22 PSBR APG2 AtGABP PLP PKS1 PGR5 AGT LTP AtRLP19 AT2G16380 MCA2 ATSYP112 ADO2 PSAE-2 ATGLK1 ATGRP7 AGL22 AT2G24240 AHA5 AR781 PLA AT2G27500 ALB3 XBAT31 ATOEP16-1 CXIP4 ANTR1 ABCG31 ATGLR3.5 KUP11 AT2G35260 SAMTL ATPROT3 PIP2;2 AtAUX1 AT2G38330 ATIREG1 ATMTP11 RCA ATFER4 Encodes a putative amino acid transporter. ACA4 COR15 MAX2 AtPIF4 ATINT1 ATSAGT1 AGL20 ATHH2 ATI1 AT2G46320 AT2G46690 ROPGAP3 AT2G48020 ATCYP38 ATBCA1 ATPPT2 AT3G03990 AT3G05160 AIF1 RCI2A AT3G06130 ATPDHK LHCB4.2 AT3G09450 ATRAB8E ANT1 ATMT3 ANAC055 MFP1 AQP1 NDF4 ARR1 HCF107 DAC AT3G19030 ATPEN2 PUT5 AT3G19850 bHLH121 AT3G21390 AT3G21670 ATSGP2 AT3G22440 AT3G23700 AtCHUP1 GAPA CCL LHCB2 JK224 ADF2 PTAC16 AT3G47070 CAB4 AT3G48200 SNRK2-2 AtIDD2 ATSSL4 AT3G51730 AT3G51760 ACX4 BGAL2 NAKR3 ATPTR1 LHCA1 ABCG19 SBPASE ATJRG21 ATVLN3 MGT6 ATPIRIN1 (AT)VAP AT3G61010 ATPIP1 ARFA1E CP12 AGY1 PETC ATRMA1 ATPC1 ATKEA3 PSBQ ATPUP13 ATCRY1 LHCB5 PSAL ATHAK5 AtRLP47 AT4G15545 AtCLA1 AT4G15610 ATVAMP724 ATINT4 AT4G16490 AT4G16680 DELTA-TIP2 ATSYP23 ATWRKY28 ATPUP10 ATPP2-A1 AT4G19860 ATPCAP1 ATM4 Encodes a Protease inhibitor/seed storage/LTP family protein PGR5-LIKE AT4G22990 AT4G23050 PIP1;5 CRR31 CHLM ABI1 CRF4 AtVPS15 ENP ATSDX1 GAMMA-VPE ATCBL10 AT4G33550 AtPLT6 ATCAD8 RD19 SHL1 LAX1 LHCB4.1 ATFER1 AT5G01750 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. AT5G01990 AT5G02160 AT5G02180 UBQ3 FD-GOGAT AT5G05310 ABCG22 ATPGIP2 PMDH2 CBSX3 ATVAMP713 ANAC083 AT5G14120 BETA AT5G14880 ER-ANT1 AT5G17670 AT5G18590 ADG2 ACL5 AT5G19940 AT5G19970 PHT4;5 ATGER3 ATHMA8 APRR5 ATTTG1 ATCOL4 AT5G26200 ATIREG3 AT5G27290 SFP2 AT5G27950 G6PD1 CAT3 AT5G39590 AtRLP54 AT5G40450 ATCLC-A ATUBC8 NDH18 AT5G44020 ATGLK2 APE2 LON2 AT5G47330 AMK2 DIR1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO FIP2 ATCBL2 ACA8 AHA3 ADO1 APO2 COPT1 AT5G59250 LTP3 ATEXO70H7 APC1 AT5G62350 SHA1 ATOPT4 AT5G64500 CLEL ATLFNR1 MSP-1
GO:0034285 response to disaccharide	BP	8.520e-21	MCCA OE23 THA1 ATBCAT-2 GWD GLYI4 LHCA2*1 AT1G21400 AHK3 DRM1 OHP2 GAPB ATFD2 ATL8 PSBR PGR5 AT2G17880 ATOEP16-1 BBX25 ACR9 RCA Encodes a putative amino acid transporter. LHCB4.2 DIN4 AT3G15450 AT3G15630 BBX31 GAPA LHCB2 ATIVD JK224 ASN1 AT3G52480 AT3G52740 LHCA1 AT3G57020 AtPP2-A13 CP12 LHCB5 LKR ADF9 ATSEN1 AT4G37220 KAI2 LHCB4.1 FD-GOGAT DIN10 AKINBETA1 EFO1 AtHGO AT5G57785 AT5G63190
GO:0034641 cellular nitrogen compound metabolic pro...	BP	1.094e-20	AT1G01260 PSB27 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT-PHH1 HDG2 BT3 AT1G05805 ARI5 ATNTH2 ATMYB13 OE23 PSAO AVDE1 AtMYB60 AMI1 CRB FHY2 ATMPK1 ATGSTU18 AT1G10585 AT1G10610 ICE2 GAPA-2 WRKY4 PnsL2 AT1G15970 NDF1 ABA3 AT1G16840 AT1G18270 EPR1 AtMYB47 NDF6 AT1G19000 LHCA2*1 ATRL5 AT1G19660 ATCLH1 BEL10 ATLFNR2 AT1G21060 AT1G22630 ATMYB3 FB BBX15 AT1G26580 AT1G26665 AHK3 SPL11 SPL10 CYCT1;3 AT1G28310 ATVOZ1 AtTRM9 AT1G31920 PRK ATMYC2 AT1G33700 GAPB ATCAO Lhca5 DYW1 AT1G49010 BBX17 AT1G49500 ABF1 FTSH1 ATERF3 AT1G51110 AT1G52220 PSAH-2 ANAC019 ALDH7B4 AT-RSH3 AT1G54500 AtTLP18.3 PSAG ATDI19 AT1G56500 AtHEMA1 AT1G60590 ATG8C AT1G62250 AT1G62310 AT1G62660 UBC28 AT1G64680 RPOD1 AT1G65230 AtMYB20 GDPDL2 AT1G67700 CSK ATHPR1 ADO3 BBX27 BBX14 STN7 ACR4 ANAC029 ATCYCD1;1 ABCB26 CRR23 AT1G70820 ATMYBL2 AT1G71480 TRFL6 AT1G73750 BBX16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATRL6 ATBBD1 BLH3 AT1G75460 encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. GASA1 AT1G76110 AT1G76450 AtHMGR1 AT1G76570 AT1G76580 AGL27 AT1G77090 GNR1 RAP2.4 BBX22 AT1G78995 WRI4 AtLa2 ATXRCC1 AT1G80780 APG2 ATBPC1 AT2G02570 PLP WRKY3 AT2G03390 ALDH6B2 AT2G14910 AtRLP19 AT2G16365 AtTLP2 HBI1 ADO2 AtOZF1 ATGLK1 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AT2G21530 ATGRP7 AT2G21960 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AtRIBA2 AGL22 SCPL8 AHA5 ATCTH AT2G26500 AT2G27290 ALB3 AT2G28810 AT2G29360 PY MAPKKK14 ETC2 TCL2 PSBW ATERF15 BBX25 ATOFP16 ACK2 ATCPL3 AT2G34140 UMAMIT13 FHY1 PDX1L4 ATPDX1.1 AT2G38300 AT2G38800 SNZ PnsL1 AT2G40260 AT2G40620 ACA4 AtSPL9 FBH4 COR15 HLH1 AtPIF4 AT2G43280 ETFQO AT2G43560 AT2G44730 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHAM1 AGL20 AT2G46250 ARF11 APRR9 AT2G46810 PSAP UPB1 AT2G47890 ATCYP38 ATBCA1 RAD23-3 ATF1 AIF1 LHCB4.2 ATRAB8E DREB2 AT3G12710 AT3G13000 AT3G13040 AtGRF5 HEME1 ATHM4 ANAC055 UVR3 AT3G15780 ROD1 ADS3 MFP1 AT3G16220 NDF4 ATEBP ARR1 HCF107 ATCRSH DAC AT3G19030 ABF4 PUT5 JMJ30 PSBTN BBX31 AT3G22440 AT3G23700 AtCHUP1 AT3G26580 GAPA DRB3 LHCB2 DEG1 AFP3 ACD1 JK224 AT3G45900 ATMYB48 LUX PTAC16 AT3G47070 ASN1 PEX11B CDF3 AT3G48200 ATBT2 AT3G48420 ATHAP5A AT3G48900 AtIDD2 BEH1 ATSSL4 ATOFP18 AFC1 SIG3 ATPTR1 LHCA1 PPL1 ATDFD SBPASE AT3G56300 AT3G57020 ARR9 AT3G57680 AT3G57800 AT3G59780 HAT3 GATA4 ATHAM2 AT3G61080 ATHB-12 CSP41A OEP6 UNE10 AT4G01460 AT4G03250 PETC AtWRKY42 ATPC1 ATCRY1 APX4 LHCB5 AT4G11570 PLDGAMMA2 PLDGAMMA3 PSAL AT4G12830 AT4G13040 NYC1 J20 CYP74B2 AtCLA1 FCA encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17810 ATWRKY28 AT4G18740 AT4G18810 ATM4 PGR5-LIKE ATNYE1 AGL19 AT4G23050 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) CHLM ATCBF2 ATCBF3 CGA1 AtFBA7 AtFBA5 BBX28 PORB AT4G27700 CRF4 AT4G28080 AtPHR1 PSAE-1 AtC3H49 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. AT4G32340 ATH1 AtGLDP1 ATHDA14 ABF3 AtMYB32 HCF244 AT4G35270 atbzip14 AT4G36210 BEE2 AtPLT6 AtGBF1 BT5 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT5G01020 AIRP2 LHCB4.1 AT5G01750 AT5G02160 CDL1 APRR7 LCL1 ATLDA AT5G05200 DREB2 HAT14 ATPGIP2 AT5G08050 TCP17 FTRA2 AT5G08430 PMDH2 KNAT4 AT5G11840 ANAC083 ABAR CCS52B ROXY2 AT5G14970 ATMIXTA AtMYB43 ENH1 RVE1 AtTLP11 NSH3 ATIPT5 ADG2 CHR42 ATHMA8 ATSIG5 PGL5 APRR5 ATBZIP9 ATCOL4 AT5G27730 GME AT5G35170 G6PD1 AT5G35970 CAT3 AT5G38520 AT5G40060 AtRLP54 BEL1 ATUBC8 TZP ATAUX2-11 AT5G44020 ATGLK2 AT5G44260 AT5G44520 ATFKBP13 AMK2 HINT3 At-NEET CRR1 AT5G52660 CLPX thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO PORA BBX29 ATCBL2 AT5G56850 GATA21 ACA8 AHA3 ADO1 ATCOL5 XBAT32 APO2 NdhN AT5G58280 AT5G58800 ATMYB59 APRR3 ATPDX2 OBP4 ATMYB34 PIF7 APRR1 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. CDF1 AT5G63080 BT1 NF-YC4 SHA1 PSAN AT5G64380 AGL31 AGL70 STR16 ATLFNR1 MSP-1 ATHB53 DEAR2 ATBT4 RBCL RPL32
GO:0006787 porphyrin-containing compound catabolic ...	BP	1.290e-20	encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT1G16840 ATCLH1 AHK3 ALDH7B4 AT1G62250 STN7 ABCB26 AT1G71480 AT1G73750 AT1G76570 ALDH6B2 AT2G14910 AtOZF1 AT2G38800 AT3G13040 PUT5 AT3G26580 DEG1 ACD1 AT3G45900 ATPTR1 AT3G57680 AT3G61080 AT4G11570 NYC1 J20 ATNYE1 AIRP2 ATLDA AT5G05200 AT5G11840 AT5G14970 AT5G35970 CLPX AtHGO
GO:0033015 tetrapyrrole catabolic process	BP	1.290e-20	encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT1G16840 ATCLH1 AHK3 ALDH7B4 AT1G62250 STN7 ABCB26 AT1G71480 AT1G73750 AT1G76570 ALDH6B2 AT2G14910 AtOZF1 AT2G38800 AT3G13040 PUT5 AT3G26580 DEG1 ACD1 AT3G45900 ATPTR1 AT3G57680 AT3G61080 AT4G11570 NYC1 J20 ATNYE1 AIRP2 ATLDA AT5G05200 AT5G11840 AT5G14970 AT5G35970 CLPX AtHGO
GO:1901565 organonitrogen compound catabolic proces...	BP	2.029e-20	MCCA encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AVDE1 THA1 AT1G16840 ATCLH1 AHK3 AT1G33700 AT1G49500 ALDH7B4 AT1G62250 AT1G62660 STN7 ABCB26 AT1G71480 AT1G73750 GASA1 AT1G76570 ALDH5F1 ALDH6B2 AT2G14910 AtOZF1 SCPL8 AtGLDP2 AT2G38800 ETFQO PAL4 AT3G13040 HEME1 ATHM4 PUT5 AT3G26580 DEG1 AT-POX ACD1 ATIVD AT3G45900 ASN1 ATPTR1 AT3G57680 AT3G61080 ATPC1 AT4G11570 NYC1 J20 CYP74B2 AtCLA1 ATNYE1 ATH1 AtGLDP1 LKR AtPLT6 SHM1 AIRP2 AT5G01750 ATLDA AT5G05200 PMDH2 AT5G11840 AT5G14970 NSH3 AT5G35970 CAT3 CLPX AtHGO STR16
GO:0009744 response to sucrose	BP	2.081e-20	MCCA OE23 THA1 ATBCAT-2 GLYI4 LHCA2*1 AT1G21400 AHK3 DRM1 OHP2 GAPB ATFD2 ATL8 PSBR PGR5 AT2G17880 ATOEP16-1 BBX25 ACR9 RCA Encodes a putative amino acid transporter. LHCB4.2 DIN4 AT3G15450 AT3G15630 BBX31 GAPA LHCB2 ATIVD JK224 ASN1 AT3G52480 AT3G52740 LHCA1 AT3G57020 AtPP2-A13 CP12 LHCB5 LKR ADF9 ATSEN1 AT4G37220 KAI2 LHCB4.1 FD-GOGAT DIN10 AKINBETA1 EFO1 AtHGO AT5G57785 AT5G63190
GO:0019682 glyceraldehyde-3-phosphate metabolic pro...	BP	3.001e-20	PSAO AVDE1 CRB ATGSTU18 PnsL2 NDF1 AT1G18270 NDF6 LHCA2*1 ATLFNR2 AT1G22630 PRK GAPB FTSH1 AT1G51110 AtTLP18.3 AT1G56500 AT1G65230 AT1G67700 CRR23 AT1G76450 AT1G77090 AT2G21530 AT2G21960 SCPL8 PY AT2G43560 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATHM4 ADS3 MFP1 NDF4 DAC AT3G23700 DEG1 PTAC16 PEX11B AT3G48200 AT3G48420 PPL1 SBPASE AT3G59780 CSP41A PETC ATPC1 APX4 AtCLA1 PGR5-LIKE CHLM AtFBA7 AtFBA5 AT4G27700 AT4G28080 ATH1 AtGLDP1 ATHDA14 CLB6 HCF244 ATLDA AT5G08050 PMDH2 ENH1 ADG2 PGL5 G6PD1 NDH18 AT5G44520 ATFKBP13 At-NEET thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. NdhN PSAN ATLFNR1
GO:0051187 cofactor catabolic process	BP	3.200e-20	encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT1G16840 ATCLH1 AHK3 ALDH7B4 AT1G62250 STN7 ABCB26 AT1G71480 AT1G73750 AT1G76570 ALDH6B2 AT2G14910 AtOZF1 AT2G38800 AT3G13040 PUT5 AT3G26580 DEG1 ACD1 AT3G45900 ATPTR1 AT3G57680 AT3G61080 AT4G11570 NYC1 J20 ATNYE1 AIRP2 ATLDA AT5G05200 AT5G11840 AT5G14970 AT5G35970 CLPX AtHGO
GO:0006081 cellular aldehyde metabolic process	BP	6.084e-20	PSAO AVDE1 CRB ATGSTU18 PnsL2 NDF1 AT1G18270 NDF6 LHCA2*1 ATLFNR2 AT1G21670 AT1G21680 AT1G22630 PRK GAPB FTSH1 AT1G51110 AtTLP18.3 AT1G56500 AT1G65230 AT1G67700 CRR23 AT1G76450 AT1G77090 AT2G21530 AT2G21960 SCPL8 PY GLX2-5 PDX1L4 ATPDX1.1 ETFQO AT2G43560 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATHM4 ADS3 MFP1 NDF4 DAC AT3G23700 DEG1 PTAC16 PEX11B AT3G48200 AT3G48420 PPL1 SBPASE AT3G59780 CSP41A PETC ATPC1 APX4 AtCLA1 PGR5-LIKE CHLM AtFBA7 AtFBA5 AT4G27700 AT4G28080 AT4G31050 ATH1 AtGLDP1 ATHDA14 CLB6 HCF244 ATLDA AT5G08050 PMDH2 BETA ENH1 AT5G18600 ADG2 PGL5 G6PD1 NDH18 AT5G44520 ATFKBP13 At-NEET thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. NdhN PSAN ATLFNR1
GO:0032787 monocarboxylic acid metabolic process	BP	7.906e-20	AT1G01260 ARI5 BBX24 OE23 ATSMO1 AVDE1 AMI1 CRB ATMPK1 GAPA-2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. SBH2 ABA3 AT1G18270 LHCA2*1 ATLFNR2 AtCOR47 HMG AT1G21670 AT1G21680 BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B. ATMYB3 AOAT1 AHK3 AML5 PRK ATMYC2 GAPB AT1G49500 NTMC2T5.1 AtTLP18.3 AT1G56500 CAT2 MSL3 UBC28 AT1G65230 AT1G66760 ABA4 AT1G67700 AOAT2 JAZ9 PATL1 JAZ2 GASA1 AT1G77090 ALDH5F1 WRI4 XERICO ATGRP7 SCPL8 PLA CYP707A2 AT103-1A PY ANTR1 GLX2-5 AtCLO3 atnudt22 CAC3 DVL11 RCA AT2G41705 ETFQO AT2G43560 ATSAGT1 AT2G44920 ATHH2 ATCYP38 ATBCA1 ATF1 AT3G04000 RCI2A ATNCED3 HEME1 ATHM4 ANAC055 ADS3 MFP1 NDF4 ARR1 JAI3 bHLH121 ABCG15 AT3G22440 AT3G23700 GAPA Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. SNRK2-2 AT3G51730 ACX4 SBPASE AT3G59780 ATPIP1 AtSLD1 PETC ATPC1 APX4 CYP74B2 AtCLA1 PIP1;5 CHLM AtFBA7 AtFBA5 AT4G28080 AtVPS15 AT4G31050 ATSDX1 ATH1 AtGLDP1 ATHDA14 KCS16 CLB6 HCF244 AT4G35810 AtPLT6 ATMES9 SHM1 RD19 SHL1 AT5G01750 FD-GOGAT ATLDA AT5G05600 ATPGIP2 FTRA2 AT5G08415 PMDH2 14-3-3lambda CBSX3 MPL1 BETA AT5G16240 AT5G18600 AT5G25770 G6PD1 CAT3 NDH18 AT5G44020 AT5G44520 ATFKBP13 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO ADO1 AT5G62350 CYP94B1 AT5G64250 AT5G64500 STR16 ATLFNR1 MSP-1 ABA1
GO:0009751 response to salicylic acid	BP	1.058e-19	BT3 ATMYB13 OE23 AtMYB60 CRB ATMPK1 ABA3 ATCLH1 ATLFNR2 ATMYB3 AHK3 PRK ATMYC2 AT1G49010 ANAC019 BBX14 ATMYBL2 JAZ2 AT1G75460 AT1G76110 BBX22 AtRLP19 ATGLK1 AGL22 AR781 PLA AT2G27500 ANTR1 AtCLO3 RCA ATHSPRO2 COR15 AtPIF4 ATCYP38 ATBCA1 ATGID1A AIF1 ANAC055 ATMYB48 ATBT2 AtIDD2 SBPASE AT3G60690 PETC UBI10 ACD6 ABI1 AT4G27450 AtVPS15 ABF3 AtMYB32 BT5 LCL1 ATPGIP2 PMDH2 BETA ATMIXTA RVE1 ATCOL4 ATGID1C AtRLP54 BEL1 DIR1 AT5G52660 ATCBL2 ATMYB59 BT1 SHA1 ATLFNR1 MSP-1 ATBT4
GO:0071229 cellular response to acid chemical	BP	1.149e-19	FBI1 ATGLR3.4 OE23 CRB ATMPK1 ATBETAFRUCT4 RHA2A ABA3 TRM3 ATCLH1 ATLFNR2 ASG5 AHK3 COR413-TM1 PRK ATMYC2 ATGLR3.3 ABF1 ANAC019 AT1G62660 ATHPR1 BBX14 JAZ9 AT1G70820 ATCPK30 JAZ2 AT1G75460 AT1G76110 BBX22 ATNRP1 AtRLP19 ATCOR413-PM1 AT2G17650 ATGLK1 AGL22 AR781 PLA CIPK3 AT2G27500 ANTR1 MAPKKK14 ATCPL3 RCA COR15B COR15 AtPIF4 ATCYP38 ATBCA1 ATGID1A AIF1 AT3G07310 AT3G10060 ANAC055 JAI3 AT3G18050 ABF4 LHCB2 AFP3 ATBT2 SNRK2-2 AtIDD2 SBPASE ARR9 ATPIRIN1 AT3G60690 PETC ATM4 ABI1 CGA1 AT4G27450 AtVPS15 MERI-5 AT4G31860 ABF3 BEE2 AT5G05600 ATPGIP2 PMDH2 BETA GASA4 ATCOL4 ATGID1C AtRLP54 BEL1 ATDOG1 DIR1 PYL8 ATCBL2 GATA21 ABI2 ATCOL5 WNK4 NF-YC4 SHA1 ATLFNR1 MSP-1
GO:0034470 ncRNA processing	BP	1.425e-19	PSB27 OE23 PSAO AVDE1 CRB GAPA-2 NDF6 LHCA2*1 ATLFNR2 AtTRM9 PRK GAPB Lhca5 AT1G52220 PSAH-2 AtTLP18.3 AT1G67700 ATHPR1 AT1G76450 APG2 ATGLK1 AT2G21530 AT2G26500 ALB3 PSBW AT2G43560 PSAP ATCYP38 LHCB4.2 HCF107 PSBTN AT3G23700 AtCHUP1 GAPA LHCB2 PTAC16 AT3G47070 LHCA1 PPL1 SBPASE CSP41A PETC ATPC1 APX4 LHCB5 PSAL PGR5-LIKE CHLM PSAE-1 HCF244 LHCB4.1 PMDH2 ENH1 ATIPT5 ADG2 AT5G38520 ATGLK2 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. ATLFNR1 MSP-1
GO:0009651 response to salt stress	BP	1.732e-19	PIP1;3 BT3 BBX24 ATMYB13 ATMPK1 ATBETAFRUCT4 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. RHA2A CP24 ABA3 EPR1 AtMYB47 AtCOR47 HMG ATMYB3 AOAT1 AHK3 COR413-TM1 ACBP AT1G49010 ATERF3 ABCG12 ANAC019 ALDH7B4 AT1G60010 AT1G62660 RPOD1 BGLU21 ATMYBL2 PATL1 TRFL6 AT1G73480 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. JAZ2 AtHMGR1 RAP2.4 XERICO AGT ATCOR413-PM1 ABX45 ATGRP7 AT2G23840 AtCLO3 ATCPL3 PIP2;2 ATP5CS ACA4 COR15 ATHH2 AtGolS1 ATGID1A AT3G05640 RCI2A ATPK1 AT3G12320 ATNCED3 ATMT3 ANAC055 AQP1 CIPK1 ABF4 ATBT2 SNRK2-2 AT3G51730 P5CS2 ATPIP1 ATHB-12 DFL2 AtRbcX1 ATGPX6 AT4G15545 AT4G16490 DELTA-TIP2 ATPP2-A1 ATPCAP1 ATM4 PIP1;5 ECIP1 ATCBF3 ABI1 ATCBL10 ABF3 AtMYB32 RD19 SHL1 LCL1 FD-GOGAT 14-3-3lambda CBSX3 ATVAMP713 ANAC083 AT5G14920 ATMIXTA RVE1 ATGID1C ATGLK2 AT5G52660 ABI2 LTP3 ATMYB59 AT5G62350 XTH6 ATBT4
GO:0006732 coenzyme metabolic process	BP	1.880e-19	PIP1;3 HPD PSAO AVDE1 CRB ATGSTU18 PnsL2 NDF1 AT1G18270 NDF6 LHCA2*1 ATLFNR2 AT1G22630 MENG AAE14 PRK GAPB FTSH1 AT1G51110 PSAG AT1G65230 CRR23 AT1G76450 AtHMGR1 AT1G77090 AT2G21530 AT2G21960 SCPL8 PY CAC3 PDX1L4 ATPDX1.1 AT2G43560 AT2G43760 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATHM4 MFP1 NDF4 DAC AT3G23700 DEG1 PTAC16 PEX11B AT3G48200 AT3G48420 PPL1 ATDFD SBPASE AT3G59780 CSP41A PETC ATPC1 APX4 AtCLA1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. PGR5-LIKE AtFBA7 AtFBA5 AT4G26860 AT4G27700 AT4G31050 ATH1 AtGLDP1 ATHDA14 ATLDA AT5G08050 FTRA2 AT5G08415 PMDH2 ENH1 ADG2 PGL5 G6PD1 AT5G44520 At-NEET NdhN PSAN ATLFNR1
GO:0006970 response to osmotic stress	BP	3.543e-19	PIP1;3 BT3 BBX24 ATMYB13 ATMPK1 ATBETAFRUCT4 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. RHA2A CP24 ABA3 EPR1 AtMYB47 AtCOR47 HMG ATMYB3 AOAT1 AHK3 COR413-TM1 ACBP AT1G49010 ATERF3 ABCG12 ANAC019 ALDH7B4 MSL3 AT1G60010 AT1G62660 RPOD1 BGLU21 ATMYBL2 PATL1 TRFL6 AT1G73480 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. JAZ2 AtHMGR1 RAP2.4 XERICO AGT ATCOR413-PM1 ABX45 ATGRP7 AT2G23840 AtCLO3 ATCPL3 PIP2;2 ATP5CS ACA4 COR15 TTL3 ATHH2 AtGolS1 ATGID1A AT3G05640 RCI2A ATPK1 AT3G12320 ATNCED3 ATMT3 ANAC055 AQP1 CIPK1 ABF4 ATBT2 SNRK2-2 AT3G51730 P5CS2 ATPIP1 ATHB-12 DFL2 AtRbcX1 ATGPX6 AT4G15545 AT4G16490 DELTA-TIP2 ATPP2-A1 ATPCAP1 ATM4 PIP1;5 ECIP1 ATCBF3 ABI1 ATCBL10 ABF3 AtMYB32 RD19 SHL1 LCL1 FD-GOGAT 14-3-3lambda CBSX3 ATVAMP713 AT-HSP17.6A ANAC083 AT5G14920 ATMIXTA AtCor6.6 RVE1 ATGID1C ATGLK2 AT5G52660 ABI2 LTP3 ATMYB59 AT5G62350 XTH6 ABA1 ATBT4
GO:0009743 response to carbohydrate	BP	4.116e-19	MCCA OE23 THA1 ATBCAT-2 ATMPK1 GWD GLYI4 ABA3 LHCA2*1 AT1G21400 AOAT1 AHK3 DRM1 AB165 OHP2 GAPB AtcFBP ALDH7B4 AT1G60010 ATFD2 RPOD1 ATL8 PSBR PGR5 AGT AT2G17880 ABX45 ATOEP16-1 BBX25 ACR9 RCA Encodes a putative amino acid transporter. LHCB4.2 DIN4 ATMT3 AT3G15450 AT3G15630 BBX31 GAPA LHCB2 ATIVD JK224 ASN1 ATBT2 AT3G52480 AT3G52740 LHCA1 AT3G57020 AtPP2-A13 ATPIP1 CP12 LHCB5 AT4G15545 ATPP2-A1 ATPCAP1 PIP1;5 LKR ADF9 ATSEN1 AT4G37220 KAI2 LHCB4.1 FD-GOGAT DIN10 AKINBETA1 ATBZIP9 ATDOG1 EFO1 AtHGO GATA21 AT5G57785 AT5G63190 ABA1
GO:0051179 localization	BP	4.432e-19	PIP1;3 ATKEA1 SEC1A PSAD-2 ATGLR3.4 ARI5 BBX24 OE23 PSAO CRB ATMPK1 AT1G10585 ATSTP1 AT1G12120 ATBETAFRUCT4 ATCCS Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PKS2 AT1G14820 CP24 ATSYP51 ABA3 HCF173 AT1G16840 ICR1 NDF6 LHCA2*1 AT1G19650 ATCLH1 ATLFNR2 AtCOR47 HMG AT1G21010 GLTP2 BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B. AT1G22570 ATRABG3B AOAT1 ATVTI12 AT1G26930 AHK3 ABCB14 AML5 PSAK ATPUP4 ACBP PRK AtLrgB AT1G32160 ATMYC2 AT1G33110 OHP2 ATGLR3.3 GAPB AT1G50970 ANAC019 AT1G53400 MSL4 GLIP5 ABCD2 PSAG AT1G56210 AT1G56220 ATDI19 AT1G56500 CAT2 MSL3 AT1G60010 ATFD2 AT1G62510 AT1G62660 UBC28 AT1G64370 AT1G64500 RPOD1 AT1G65230 AT1G66760 AT1G67700 CSK AT1G67870 BBX14 AT1G68570 AIT1 KUP6 ABCB26 CRR23 AT1G71480 PATL1 AT1G74730 JAZ2 JAC1 AT1G75460 AT1G76110 AT1G76450 AtHMGR1 AT1G76530 AtSTP14 AUF1 AT1G78560 BBX22 PSBR APG2 AtGABP PLP PKS1 PGR5 AGT LTP AtRLP19 AT2G16380 MCA2 ATSYP112 ADO2 PSAE-2 ATGLK1 ATGRP7 AGL22 AT2G24240 AHA5 AR781 PLA AT2G27500 ALB3 XBAT31 ATOEP16-1 CXIP4 ANTR1 ABCG31 ATGLR3.5 KUP11 AT2G35260 SAMTL ATPROT3 PIP2;2 FHY1 AtAUX1 AT2G38330 ATIREG1 ATMTP11 RCA ATFER4 Encodes a putative amino acid transporter. ACA4 COR15 MAX2 AtPIF4 ATINT1 ATSAGT1 AGL20 ATHH2 ATI1 AT2G46320 AT2G46690 ROPGAP3 AT2G48020 ATCYP38 ATBCA1 ATPPT2 AT3G03990 AT3G05160 AIF1 RCI2A AT3G06130 ATPDHK ATPLC2 LHCB4.2 AT3G09450 ATRAB8E ANT1 BGAL1 ATMT3 ANAC055 MFP1 AQP1 NDF4 ARR1 HCF107 DAC AT3G19030 ATPEN2 PUT5 AT3G19850 bHLH121 AT3G21390 AT3G21670 ATSGP2 AT3G22440 AT3G23700 AtCHUP1 GAPA CCL LHCB2 JK224 ADF2 PTAC16 AT3G47070 CAB4 AT3G48200 SNRK2-2 AtIDD2 ATSSL4 AT3G51730 AT3G51760 ACX4 BGAL2 NAKR3 ATPTR1 LHCA1 ABCG19 SBPASE ATJRG21 ATVLN3 MGT6 ATPIRIN1 (AT)VAP AT3G61010 ATPIP1 ARFA1E CP12 AGY1 PETC ATRMA1 ATPC1 ATKEA3 PSBQ ATPUP13 ATCRY1 LHCB5 PSAL ATHAK5 AtRLP47 AT4G15545 AtCLA1 AT4G15610 ATVAMP724 ATINT4 AT4G16490 AT4G16680 DELTA-TIP2 ATSYP23 ATWRKY28 ATPUP10 ATPP2-A1 AT4G19860 ATPCAP1 ATM4 Encodes a Protease inhibitor/seed storage/LTP family protein PGR5-LIKE AT4G22990 AT4G23050 PIP1;5 CRR31 CHLM ABI1 ATFIM1 CRF4 AtVPS15 ENP ATSDX1 GAMMA-VPE ATCBL10 AT4G33550 AtPLT6 ATCAD8 RD19 SHL1 AT5G01020 LAX1 LHCB4.1 ATFER1 AT5G01750 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. AT5G01990 AT5G02160 AT5G02180 UBQ3 FD-GOGAT AT5G05310 ABCG22 ATPGIP2 PMDH2 14-3-3lambda CBSX3 ATVAMP713 ANAC083 AT5G14120 BETA AT5G14880 ER-ANT1 AT5G17670 AT5G18590 ADG2 ACL5 AT5G19940 AT5G19970 PHT4;5 ATGER3 ATHMA8 APRR5 ATTTG1 ATCOL4 AT5G26200 ATIREG3 AT5G27290 SFP2 AT5G27950 G6PD1 CAT3 AT5G39590 AtRLP54 AT5G40450 ATCLC-A ATUBC8 NDH18 AT5G44020 ATGLK2 APE2 LON2 AT5G47330 AMK2 DIR1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtHGO FIP2 ATCBL2 AT5G56100 ACA8 AHA3 ADO1 APO2 COPT1 AT5G59250 LTP3 ATEXO70H7 APC1 AT5G62350 SHA1 ATOPT4 AT5G64500 CLEL ATLFNR1 MSP-1
GO:0010207 photosystem II assembly	BP	5.543e-19	PSB27 OE23 PSAO CRB GAPA-2 NDF1 HCF173 AT1G19740 ATLFNR2 AT1G29700 PRK GAPB Lhca5 AT1G52220 PSAH-2 AtTLP18.3 ATFD2 AT1G67700 ATHPR1 AT1G75460 PSBR APG2 ATGLK1 AT2G21530 AT2G26500 ALB3 PSBW PnsL1 AT2G43560 PSAP ATCYP38 HCF243 HCF107 DAC PSBTN AtCHUP1 GAPA PPL1 SBPASE CSP41A PETC ATPC1 PSAL PGR5-LIKE PSAE-1 HCF244 PMDH2 ENH1 ATSIG5 AT5G38520 APE1 ATGLK2 CRR1 NdhN ATLFNR1 MSP-1
GO:0033993 response to lipid	BP	6.217e-19	FBI1 BBX24 ATMYB13 AtMYB60 ATMPK1 AT1G11210 ATBETAFRUCT4 RHA2A ABA3 TRM3 AtCOR47 ASG5 ATMYB3 AHK3 COR413-TM1 ATMYC2 AtcFBP AT1G49010 ABF1 ATERF3 ABCG12 ANAC019 ALDH7B4 AT1G56220 AT1G62660 AT-EXP1 AtCLO4 ATMYBL2 AT1G73480 AT1G73980 ATCPK30 JAZ2 GASA1 AUF1 ATNRP1 XERICO ATCOR413-PM1 AT2G17650 ABX45 AT2G21130 AtGRF1 AT2G23840 ELF3 CIPK3 MAPKKK14 AT2G32090 AtCLO3 ATCPL3 PIP2;2 AT2G37950 ATP5CS COR15 TTL3 AFO AGL20 PSAP AtGolS1 ATGID1A AT3G05640 AIF1 RCI2A AT3G07310 AT3G11110 AT3G12320 AtGRF5 ATNCED3 ANAC055 CIPK1 AT3G18050 ABF4 AFP3 ATBT2 ARLA1C SNRK2-2 P5CS2 ARR9 AtSPP1 ATPIRIN1 ATHB-12 AT4G01330 DFL2 ATM4 IQD22 ATCBF3 ABI1 CGA1 AT4G28080 MERI-5 ABF3 AtMYB32 UBC17 BEE2 CDL1 LCL1 14-3-3lambda ANAC083 AT5G14920 GASA4 ATMIXTA AtCor6.6 AtMYB43 RVE1 BGLU37 AtTGG1 ATGID1C BHLH136 ATGLK2 CIPK20 ATDOG1 AT5G52660 PYL8 GATA21 ABI2 AT5G57340 LTP3 ATMYB59 NF-YC4 XTH6 ATDI8 ATBT4 RBCL
GO:0044248 cellular catabolic process	BP	6.278e-19	MCCA encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT-PHH1 ARI5 FTSH8 AVDE1 THA1 ATBCAT-1 ATBCAT-2 ATMPK1 ATGSTU18 AMSH2 GWD Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. ABA3 AT1G16840 ATCLH1 AT1G21670 AT1G21680 BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B. ATRABG3B AOAT1 AT1G26580 AHK3 AML5 AT1G33700 GAPB AtcFBP AT1G49500 FTSH1 LYK3 ESP ALDH7B4 AT1G55000 UKL3 CAT2 ATG8C AT1G62250 UBC5 UBC28 TUA1 ABA4 ATHPR1 ADO3 STN7 ABCB26 AT1G71480 TRFL6 AT1G73750 GASA1 AT1G76570 ATSKP2;2 ALDH5F1 ALDH6B2 AT2G14910 ADO2 MIOX2 AtOZF1 ATUBP4 SCPL8 ATGPX1 EBF1 AtGLDP2 ALB3 AT103-1A GLX2-5 ATGPX2 AT2G31810 ACK2 ATLMCO4 AT2G38240 AT2G38800 DVL11 MAX2 ETFQO AT2G43540 ATATG8E ATI1 RAD23-3 AT3G04000 PAL4 AT3G13040 BGAL1 HEME1 ATHM4 ARR1 PUT5 bHLH121 ABCG15 AT3G22440 AT3G26580 DEG1 CYP81D11 AT-POX ACD1 ATIVD AT3G45900 ASN1 AT3G51730 ACX4 BGAL2 ATPTR1 AT3G57680 AT3G61080 AtTIR1 UBQ14 ATRMA1 ATPC1 AT4G11570 ATGPX6 PLDGAMMA2 NYC1 J20 CYP74B2 AT4G15545 AtCLA1 AT4G15610 AT4G16190 ATG8F AtBAM3 ATWRKY28 AT4G19860 APG8A PGR5-LIKE ATNYE1 ATTRE1 ABI1 BGAL12 AtVPS15 AT4G30790 AT4G31050 ATH1 AtGLDP1 LKR UBC17 AtPLT6 SHM1 ATCAD8 SHL1 AIRP2 AT5G01750 UPL4 UBQ3 ATLDA AT5G05200 NDC1 PMDH2 14-3-3lambda AT5G10650 AT5G11840 CCS52B MPL1 BETA AT5G14970 AT5G18600 NSH3 A/N-InvE EBF2 BGLU37 AtTGG1 AT5G27920 AT5G35970 CAT3 ATUBC8 LON2 UBC10 CLPX AT5G53360 AtHGO PDC2 BAM4 BGAL4 ADO1 XBAT32 ftsh9 AT5G64500 STR16
GO:0030003 cellular cation homeostasis	BP	6.738e-19	PSAD-2 AT-PHH1 ATGLR3.4 PSAO ATCCS NDF6 LHCA2*1 PSAK AtLrgB ATGLR3.3 PSAG CRR23 AT1G74730 AGT PSAE-2 ATGLR3.5 ATMTP11 ATFER4 ACA4 AtPIF4 ATPDHK ATMT-1 ATMT3 AQP1 NDF4 CCL AT3G47070 CAB4 BGAL2 AT3G61010 ABC1 PSBQ ATCRY1 PSAL CRR31 ATFER1 AT5G01750 AT5G02160 AT5G19940 ATGER3 ATCOL4 ATIREG3 AT5G27290 CAT3 ATCLC-A NDH18 AT5G44020 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. ACA8 MSP-1
GO:0042254 ribosome biogenesis	BP	8.046e-19	PSB27 OE23 PSAO AVDE1 CRB GAPA-2 NDF6 LHCA2*1 ATLFNR2 PRK GAPB Lhca5 AT1G52220 PSAH-2 AtTLP18.3 AT1G67700 ATHPR1 AT1G76450 APG2 ATGLK1 AT2G21530 AT2G26500 ALB3 PSBW AT2G43560 PSAP ATCYP38 LHCB4.2 HCF107 PSBTN AT3G23700 AtCHUP1 GAPA LHCB2 PTAC16 AT3G47070 LHCA1 PPL1 SBPASE CSP41A PETC ATPC1 APX4 LHCB5 PSAL PGR5-LIKE CHLM PSAE-1 HCF244 LHCB4.1 PMDH2 ENH1 ADG2 AT5G38520 ATGLK2 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. ATLFNR1 MSP-1
GO:0009767 photosynthetic electron transport chain	BP	9.044e-19	OE23 GAPA-2 PnsL2 NDF1 NDF6 ATLFNR2 PRK GAPB PSAH-2 AT1G54500 AtTLP18.3 PSAG AT1G56500 ATFD2 ATHPR1 CRR23 CRR3 PGR5 PSAP ATCYP38 ADS3 NDF4 AT3G23700 SBPASE PETC ATPC1 PGR5-LIKE PPH1 AT5G08050 ATHMA8 ATFRO7 CRR1 ABI2 PSAN ATLFNR1 MSP-1
GO:0016311 dephosphorylation	BP	9.072e-19	PSAD-2 PSB27 PSAO CRB ATMPK1 GAPA-2 CP24 ATCLH1 PRK AT5P1 AT1G52220 PSAH-2 AtTLP18.3 ATHPR1 BBX14 AT1G71710 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G75460 AT1G76110 BBX22 ATXRCC1 APG2 AtRLP19 ATGLK1 AGL22 ALB3 CVL1 COR15 AtPIF4 PSAP ATCYP38 AIF1 LHCB4.2 HCF107 ATPEN2 PSBTN AtCHUP1 AT3G43220 AtIDD2 AT3G51370 SBPASE AT3G63240 ATPC1 PGR5-LIKE ABI1 PPH1 AT4G31860 AT5G03880 ATPGIP2 PMDH2 AT5G19940 ATCOL4 PP2C74 AtRLP54 ATGLK2 APE2 AT5G48790 ATCBL2 ABI2 SHA1 PSAN MSP-1
GO:0044802 single-organism membrane organization	BP	9.250e-19	OE23 CRB ATMPK1 ABA3 ATCLH1 ATLFNR2 PRK AtLrgB ATMYC2 Lhca5 AT1G51110 ANAC019 AT1G56500 AT1G64370 AT1G65230 PTAC4 AT1G67700 AT1G67870 BBX14 JAZ2 AT1G75460 AT1G76110 AT1G76450 TAPX BBX22 APG2 AtRLP19 ATGLK1 AGL22 AR781 PLA AT2G27500 ALB3 ANTR1 RCA ATFER4 COR15 AtPIF4 AT2G43560 AFO PSAP ATCYP38 ATBCA1 AIF1 MAP3KE2 ATMT3 ATHM4 ANAC055 MFP1 HCF107 DAC AT3G19030 AT3G23700 AtCHUP1 ACD1 PTAC16 AT3G47070 AT3G48420 AtIDD2 SBPASE PPD6 AGY1 PETC ATPP2-A1 PGR5-LIKE ABI1 ATH1 ATHDA14 ATPGIP2 PMDH2 ANAC083 BETA ADG2 ATTTG1 ATCOL4 AT5G27950 AtRLP54 AT5G40450 NDH18 ATGLK2 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. ATCBL2 SHA1 ATLFNR1 MSP-1
GO:0055082 cellular chemical homeostasis	BP	1.261e-18	PSAD-2 AT-PHH1 ATGLR3.4 PSAO ATCCS NDF6 LHCA2*1 PSAK AtLrgB ATGLR3.3 PSAG CRR23 AT1G74730 AGT PSAE-2 ATGLR3.5 ATMTP11 ATFER4 ACA4 AtPIF4 ATPDHK ATMT-1 ATMT3 AQP1 NDF4 CCL AT3G47070 CAB4 BGAL2 AT3G61010 ABC1 PSBQ ATCRY1 PSAL CRR31 ATFER1 AT5G01750 AT5G02160 AT5G19940 ATGER3 ATBZIP9 ATCOL4 ATIREG3 AT5G27290 CAT3 ATCLC-A NDH18 AT5G44020 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. GATA21 ACA8 MSP-1
GO:0005982 starch metabolic process	BP	1.322e-18	ACD31.2 AT1G07280 GWD NDF6 AT1G22630 FB AtcFBP ABCD2 AT1G56500 AT1G65230 GDPDL2 AT1G70820 AT1G73655 AT1G76450 AT1G77090 APG2 AT2G04700 AT2G21530 PY AT2G31040 BE3 ATF1 ATSFR2 ATHM4 AT3G15570 MFP1 NDF4 DAC AT3G18500 ATPHS2 AT3G48200 AT3G48420 AT3G51510 SBPASE AT3G59780 OEP6 AT4G04340 ATPC1 APX4 AtBAM3 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. ATSS4 PGR5-LIKE ATCBF3 AtFBA5 PORB AT4G27700 AtGLDP1 ATHDA14 AT4G36530 AT5G02940 ATLDA AT5G05200 AT5G14970 A/N-InvE APRR5 APE1 ATFRO8 BAM4 APO2 NdhN SHA1
GO:0019252 starch biosynthetic process	BP	1.326e-18	ACD31.2 AT1G07280 GWD NDF6 AT1G22630 ABCD2 AT1G56500 AT1G65230 GDPDL2 AT1G70820 AT1G73655 AT1G76450 AT1G77090 APG2 AT2G04700 AT2G21530 PY AT2G31040 BE3 ATF1 ATSFR2 ATHM4 AT3G15570 MFP1 NDF4 DAC AT3G18500 ATPHS2 AT3G48200 AT3G48420 AT3G51510 SBPASE AT3G59780 OEP6 AT4G04340 ATPC1 APX4 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. ATSS4 PGR5-LIKE AtFBA5 PORB AT4G27700 AtGLDP1 ATHDA14 AT4G36530 AT5G02940 ATLDA AT5G05200 AT5G14970 APE1 ATFRO8 APO2 NdhN SHA1
GO:0009639 response to red or far red light	BP	1.467e-18	FBI1 BBX24 OE23 CRB FHY2 SBH2 LHCA2*1 FB AB165 PRK OHP2 GAPB AtTLP18.3 ATFD2 ATHPR1 AT-EXP1 BBX16 AT1G76450 AT1G76570 RAP2.4 BBX22 PSBR PKS1 LHCB2 PGR5 ADO2 ELF3 CYP707A2 FHY1 AtAUX1 RCA ELF4 COR15 HLH1 AtPIF4 AT2G43280 ROPGAP3 APRR9 LHCB4.2 GAPA LHCB2 JK224 PTAC16 AT3G47070 LHCA1 ATPOB1 CP12 CSP41A ABC1 ATCRY1 APX4 LHCB5 PGR5-LIKE ATH1 HCF244 KAI2 COP3 LHCB4.1 APRR7 FD-GOGAT PKS4 ENH1 ADG2 ACL5 ATSIG5 APRR5 RBCS2B BHLH136 EFO1 ADO1 PIF7 APRR1 ABA1
GO:0019220 regulation of phosphate metabolic proces...	BP	1.985e-18	PSAD-2 PSB27 PSAO CRB ATMPK1 GAPA-2 CP24 ATCLH1 CYCT1;3 PRK AT1G52220 PSAH-2 AtTLP18.3 ATHPR1 BBX14 ATCYCD1;1 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G75460 AT1G76110 BBX22 ATXRCC1 APG2 AtRLP19 ATGLK1 AGL22 ALB3 ACK2 COR15 AtPIF4 PSAP ATCYP38 AIF1 LHCB4.2 HCF107 ATPEN2 PSBTN CYCP2;1 AtCHUP1 AtIDD2 SBPASE ATPC1 PGR5-LIKE AT5G03880 ATPGIP2 PMDH2 AT5G19940 ATCOL4 AtRLP54 ATGLK2 APE2 AT5G48790 ATCBL2 ABI2 SHA1 PSAN MSP-1