4.0:Analysis result:Information of module

    Top 100 most enriched GO terms

GOID/Term	Ontology	p-value	Genes
GO:0006412 translation	BP	1.400e-110	emb2386 RPS15 AT1G07070 AT1G07210 AT1G07930 AT1G08360 AT1G08845 AT1G09590 AT1G09690 AT1G15250 HLL AT1G18540 PFL RPL27A AT1G23410 AT1G25260 AT1G26740 AT1G26880 RPL10B AT1G27400 NFD3 AT1G33120 AT1G34030 AT1G41880 ARP1 RACK1B AT1G48830 AT1G57660 AT1G57860 XW6 ARP2 AT1G64600 AT1G64880 AT1G67430 ATELF5A-3 AT1G70600 AP40 AT1G74050 AT1G74060 AT1G77750 AT1G80750 AT2G01250 AT2G05220 AT2G09990 AT2G17360 EMB2296 AT2G19730 AT2G19740 AT2G19750 AT2G20060 AT2G20450 AT2G21580 AT2G25210 PGY1 AT2G27710 AT2G31610 AT2G32220 AT2G34480 RPS14 AT2G36160 AT2G36170 RPL24A AT2G37190 ATRPS5B AT2G37600 AT2G39390 ATRPL23A AteIF3f AT2G40010 AT2G40510 AT2G40590 AT2G40660 AT2G41840 AT2G42710 RPL16A AT2G44120 AT2G44860 AT2G45710 AT2G47610 AT3G01790 AT3G02080 AT3G02560 AT3G04230 RPSAb AT3G04840 AT3G04920 AT3G05560 AT3G06320 AT3G06680 AT3G07110 AT3G09200 AT3G09630 AT3G09680 AT3G10610 AT3G11250 AT3G11510 AML1 AT3G13580 AT3G13882 AT3G14600 AT3G16080 AT3G16780 RFC3 RPL3P RLK902 AT3G18760 AT3G22230 RPS10 AT3G23390 AT3G24830 ATL5 AT3G28900 AT3G44590 AT3G45030 AT3G47370 EMB1080 ATBBC1 AT3G49080 AT3G49910 AT3G52580 EMB2167 RPL24 AT3G53430 AT3G53740 AT3G53870 AT3G53890 AT3G55170 RPL23A2 AT3G55750 AT3G56340 AT3G57490 AT3G58660 AT3G58700 AT3G60770 AT3G62870 AT4G02230 AT4G02930 AT4G10450 AT4G11120 AT4G13170 AT4G14320 AT4G15000 AT4G16720 AT4G17390 AT4G18100 RPL16B AT4G23620 AT4G25740 AT4G25890 AT4G26230 AT4G28360 AT4G29410 rps15ae AT4G30800 NFD1 RPS6 AT4G34555 AT4G34670 AT4G36130 AT4G37660 AT5G02610 AT5G02870 AT5G04800 AT5G06360 AT5G07090 AT5G09500 AT5G09510 EMB3010 AT5G11750 AT5G15200 AT5G15520 PSRP3/2 AT5G16130 AT5G18380 AT5G22440 AT5G23535 RPS11-BETA AT5G23900 AT5G27770 AT5G27850 AT5G28060 AT5G35530 OLI7 AT5G39850 AT5G40040 AT5G45590 AT5G45775 AT5G46430 AT5G47700 AT5G47930 AT5G48760 AT5G52650 AT5G53070 ANQ1 AT5G56710 AT5G56940 AT5G57290 AT5G58420 AT5G59240 AT5G59850 AT5G60670 AT5G61170 AT5G62300 RPS28 AT5G64650 AT5G64670 AT5G66860 AT5G67510
GO:0001510 RNA methylation	BP	1.435e-103	emb2386 AtTRM82 AT1G18540 AT1G18850 AT1G23280 AT1G25260 AT1G26880 RPL10B AT1G27400 AT1G34030 ARP1 RACK1B ATNUC-L1 AT1G52930 G-H2AX NOP56 TIM13 AT1G63660 IMP4 AT1G67430 AP40 AT1G80750 AT2G17360 AT2G20450 EDA27 AT2G21580 AT2G27710 HDA13 TIM10 AT2G32220 AT2G35790 AT2G36170 RPL24A AT2G37190 AT2G37990 HTA8 ATRPL23A AT2G40010 AT2G41840 RPL16A AT2G44120 AT2G44860 AT2G45710 AT2G47610 AT3G03920 AT3G03960 AT3G04840 AT3G04920 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G05560 NSN1 AT3G07110 AT3G07750 AT3G09200 AT3G09630 AT3G10610 AT3G11510 ATPRMT3 AT3G15460 AT3G16080 AT3G16780 RACK1C AT3G18600 TOM40 AT3G22660 AT3G23620 ATL5 ATPHB4 CARA AT3G28900 AT3G44590 ATHD2A AT3G47370 ATBBC1 AT3G49910 ATEBP1 AT3G52580 RPL24 AT3G53430 ROC2 AtCBF5 AT3G57490 AT3G58660 AT3G58700 AT3G60770 AT3G62870 AT4G10450 AT4G12600 AT4G15000 AT4G15640 AT4G16720 AT4G17390 ATFKBP53 ATFIB2 AT4G25730 AT4G29410 RUXF AT4G30800 NFD1 RPS6 AT4G34670 AT5G02050 AT5G02870 AT5G08180 AT5G09510 AT5G13830 AT5G14600 AT5G15200 AT5G15520 AT5G16130 TOZ AT5G20160 AT5G22440 ATHD2 AT5G27770 AT5G35530 OLI7 ATPHB3 AT5G48760 TIM8 ATFBR1 AT5G58420 AT5G59850 AT5G64680
GO:0009451 RNA modification	BP	3.167e-80	emb2386 AtTRM82 AT1G09800 AT1G18540 AT1G18850 AT1G20370 AT1G23280 AT1G25260 AT1G26880 RPL10B AT1G27400 AT1G34030 ARP1 RACK1B ATNUC-L1 AT1G52930 G-H2AX NOP56 TIM13 AT1G63660 IMP4 AT1G67430 AP40 AT1G80750 AT2G17360 AT2G20450 EDA27 AT2G21580 AT2G27710 HDA13 TIM10 AT2G32220 AT2G35790 AT2G36170 RPL24A AT2G37190 AT2G37990 HTA8 ATRPL23A AT2G40010 AT2G41840 RPL16A AT2G44120 AT2G44860 AT2G45710 AT2G47610 AT3G03920 AT3G03960 AT3G04840 AT3G04920 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G05560 NSN1 AT3G07110 AT3G07750 AT3G09200 AT3G09630 AT3G10610 AT3G11510 ATPRMT3 RIP1 AT3G15460 AT3G16080 AT3G16780 RACK1C AT3G18600 AT3G19440 TOM40 AT3G22660 AT3G23620 ATL5 ATPHB4 CARA AT3G28900 AT3G44240 AT3G44590 ATHD2A AT3G47370 ATBBC1 AT3G49910 ATEBP1 AT3G52580 RPL24 AT3G53430 ROC2 AtCBF5 AT3G57490 AT3G58660 AT3G58700 AT3G60770 AT3G62870 AT4G10450 AT4G12600 AT4G15000 AT4G15640 AT4G16720 AT4G17390 MORF1 ATFKBP53 ATFIB2 AT4G25730 AT4G29410 RUXF AT4G30800 NFD1 RPS6 AT4G34670 AT5G02050 AT5G02870 AT5G08180 AT5G09510 AT5G13830 AT5G14600 AT5G15200 AT5G15520 AT5G16130 TOZ AT5G20160 AT5G22440 ATHD2 AT5G24840 AT5G27770 AT5G35530 OLI7 ATPHB3 AT5G48760 TIM8 ATFBR1 AT5G58420 AT5G59850 AT5G64680
GO:0043414 macromolecule methylation	BP	2.541e-73	emb2386 AtTRM82 ATPRMT10 AT1G05440 ATPCNA1 DECOY AT1G18540 AT1G18850 AT1G23280 AT1G23410 AT1G25260 AT1G26880 RPL10B AT1G27400 AT1G34030 ARP1 RACK1B ATNUC-L1 AT1G52930 G-H2AX NOP56 TIM13 AT1G63660 IMP4 AT1G67430 AP40 CYCB2;4 AT1G80750 AT2G17360 ATPRMT1A AT2G20450 EDA27 AT2G21580 AT2G27710 HDA13 TIM10 ATPCNA2 AT2G32220 AT2G35790 AT2G36170 RPL24A AT2G37190 AT2G37990 HTA8 ATRPL23A AT2G39795 AT2G40010 AT2G40660 AT2G41840 RPL16A AT2G44120 AT2G44860 AT2G45710 AT2G47610 AT3G02650 AT3G03920 AT3G03960 AT3G04840 AT3G04920 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G05560 NSN1 AT3G07110 AT3G07750 AT3G09200 AT3G09630 AT3G10610 AT3G11510 CYC2 ATPRMT3 AT3G13160 AT3G14190 AT3G15460 AT3G16080 AT3G16780 RACK1C AT3G18600 TOM40 AT3G22660 AT3G23620 ATL5 ATPHB4 CARA AT3G28900 AT3G44590 ATHD2A AT3G47370 ATBBC1 DMS3 AT3G49910 AT3G51280 ATEBP1 AT3G52580 RPL24 AT3G53430 HTA11 AT3G55605 ROC2 AT3G57000 AtCBF5 AT3G57490 AT3G58660 AT3G58700 AT3G60770 AT3G62870 AT4G05400 AT4G10450 AT4G12600 AT4G15000 AT4G15640 AT4G16720 AT4G17390 SNI1 ATFKBP53 ATFIB2 AT4G25730 RRP41L AT4G29410 ATPRMT11 RUXF AT4G30800 NFD1 RPS6 AT4G31810 AT4G34670 AT4G35850 AT5G02050 AT5G02870 AT5G08180 AT5G09510 AT5G13520 AT5G13830 AT5G14600 AT5G15200 AT5G15520 AT5G16130 TOZ AT5G20160 AT5G22440 ATHD2 AT5G25580 AT5G27770 AT5G35530 OLI7 ATPHB3 POLA3 AT5G48360 AT5G48760 TIM8 ATFBR1 AT5G53920 AT5G58420 AT5G59850 GR-RBP3 AT5G64680 AT5G67200"
GO:0032259 methylation	BP	1.747e-72	emb2386 AtTRM82 ATPRMT10 AT1G05440 ATPCNA1 DECOY AT1G18540 AT1G18850 AT1G23280 AT1G23410 AT1G25260 AT1G26880 RPL10B AT1G27400 AT1G34030 ARP1 RACK1B ATNUC-L1 AT1G52930 G-H2AX NOP56 TIM13 AT1G63660 IMP4 AT1G67430 AP40 CYCB2;4 AT1G80750 AT2G17360 ATPRMT1A AT2G20450 EDA27 AT2G21580 AT2G27710 HDA13 TIM10 ATPCNA2 AT2G32220 AT2G35790 AT2G36170 RPL24A AT2G37190 AT2G37990 HTA8 ATRPL23A AT2G39795 AT2G40010 AT2G40660 AT2G41840 RPL16A AT2G44120 AT2G44860 AT2G45710 AT2G47610 AT3G02650 AT3G03920 AT3G03960 AT3G04840 AT3G04920 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G05560 NSN1 AT3G07110 AT3G07750 AT3G09200 AT3G09630 AT3G10610 AT3G11510 CYC2 ATPRMT3 AT3G13160 AT3G14190 AT3G15460 AT3G16080 AT3G16780 RACK1C AT3G18600 TOM40 AT3G22660 AT3G23620 ATL5 ATPHB4 CARA AT3G28900 AT3G44590 ATHD2A AT3G47370 ATBBC1 DMS3 AT3G49910 AT3G51280 ATEBP1 AT3G52580 RPL24 AT3G53430 HTA11 AT3G55605 ROC2 AT3G57000 AtCBF5 AT3G57490 AT3G58660 AT3G58700 AT3G60770 AT3G62870 AT4G05400 AT4G10450 AT4G12600 AT4G15000 AT4G15640 AT4G16720 AT4G17390 SNI1 ATFKBP53 ATFIB2 AT4G25730 RRP41L AT4G29410 ATPRMT11 RUXF AT4G30800 NFD1 RPS6 AT4G31810 AT4G34670 AT4G35850 AT5G02050 AT5G02870 AT5G08180 AT5G09510 AT5G13520 AT5G13830 AT5G14600 AT5G15200 AT5G15520 AT5G16130 TOZ AT5G20160 AT5G22440 ATHD2 AT5G25580 AT5G27770 AT5G35530 OLI7 ATPHB3 POLA3 AT5G48360 AT5G48760 TIM8 ATFBR1 AT5G53920 AT5G58420 AT5G59850 GR-RBP3 AT5G64680 AT5G67200"
GO:0042254 ribosome biogenesis	BP	1.387e-56	emb2386 LIP2 AT1G07070 AT1G15250 PFL AT1G25260 AT1G26880 AT1G34030 AT1G41880 RACK1B AT1G48830 ATNUC-L1 AT1G52930 IMP4 AP40 AT1G73940 AT1G77750 AT2G05220 AT2G19730 AT2G19740 AT2G20450 EDA27 AT2G34480 RPL24A AT2G37190 AT2G37990 AT2G39390 ATRPL23A AT2G40010 AT2G40510 AT2G40590 AT2G44860 AT2G45710 AT2G47610 AT3G02560 AT3G03920 RPSAb AT3G04920 AT3G06680 AT3G07750 AT3G09200 AT3G10610 AT3G11250 AT3G13230 AT3G14600 AT3G16080 AT3G16780 RFC3 TOM40 AT3G22230 AtGRP4 ATL5 AT3G28900 ATHD2A ATBBC1 RPL24 AT3G53430 AT3G53890 AT3G55170 RPL23A2 AT3G55750 ROC2 AT3G56340 AT3G62870 AT4G02230 AT4G04940 AT4G12600 ATGRP2 AT4G18100 ATFIB2 AT4G25730 AT4G26230 AT4G26600 AT4G29410 RPS6 AtLa1 AT5G02610 AT5G04800 AT5G06360 EMB3010 AT5G11240 AT5G11750 AT5G16130 TOZ AT5G20160 AT5G22100 AT5G22440 AT5G23900 AT5G28060 OLI7 AT5G46430 AT5G47930 ATFBR1 AT5G53070 OLI2 AT5G56710 AT5G56940 RID2 AT5G59240 AT5G60670 RPS28 AT5G64670
GO:0022613 ribonucleoprotein complex biogenesis	BP	4.025e-56	emb2386 LIP2 AT1G07070 AT1G15250 PFL AT1G25260 AT1G26880 AT1G34030 AT1G41880 RACK1B AT1G48830 ATNUC-L1 AT1G52930 IMP4 AP40 AT1G73940 AT1G77750 AT2G05220 AT2G19730 AT2G19740 AT2G20450 EDA27 EMA1 AT2G34480 RPL24A AT2G37190 AT2G37990 AT2G39390 ATRPL23A AT2G40010 AT2G40510 AT2G40590 AT2G44860 AT2G45710 AT2G47610 AT3G02560 AT3G03920 RPSAb AT3G04920 AT3G06680 AT3G07750 AT3G09200 AT3G10610 AT3G11250 AT3G13230 AT3G14600 AT3G16080 AT3G16780 RFC3 TOM40 AT3G22230 AtGRP4 ATL5 AT3G28900 ATHD2A ATBBC1 RPL24 AT3G53430 AT3G53890 AT3G55170 RPL23A2 AT3G55750 ROC2 AT3G56340 AT3G62870 AT4G02230 AT4G04940 AT4G12600 ATGRP2 AT4G18100 ATFIB2 AT4G25730 AT4G26230 AT4G26600 AT4G29410 RPS6 AtLa1 AT5G02610 AT5G04800 AT5G06360 EMB3010 AT5G11240 AT5G11750 AT5G16130 TOZ AT5G20160 AT5G22100 AT5G22440 AT5G23900 AT5G28060 OLI7 AT5G46430 AT5G47930 ATFBR1 AT5G53070 OLI2 AT5G56710 AT5G56940 RID2 AT5G59240 AT5G60670 RPS28 AT5G64670
GO:0009220 pyrimidine ribonucleotide biosynthetic p...	BP	7.739e-47	NFD5 AT1G23280 NFD3 AT1G48570 RACK1B ATNUC-L1 AT1G52930 NOP56 AT1G63660 AT1G64880 AT1G71850 AT1G79150 PPR596 AT2G15000 ASP1 HSP60-2 WDR55 AT2G35040 AT2G37020 AT2G39795 AT2G40660 AT3G02650 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G09630 AT3G10530 ATPRMT3 AT3G13160 AT3G15140 AT3G15460 AT3G16780 RACK1C AT3G18600 TOM40 RPS10 AT3G23940 ATL5 CARA ATHD2A AT3G49080 ATEBP1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G57490 AT3G57940 AT3G58660 AT4G02930 AT4G04940 ATNDK1 AT4G17390 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G31810 AtLa1 AT4G35850 AT4G36580 AT5G02050 AT5G02870 AT5G07090 AT5G11240 ATHD2 PYRD OLI7 AT5G47210 ATRBP45A GR-RBP3 AT5G61880 AT5G64670
GO:0009218 pyrimidine ribonucleotide metabolic proc...	BP	2.994e-46	NFD5 AT1G23280 NFD3 AT1G48570 RACK1B ATNUC-L1 AT1G52930 NOP56 AT1G63660 AT1G64880 AT1G71850 AT1G79150 PPR596 AT2G15000 ASP1 HSP60-2 WDR55 AT2G35040 AT2G37020 AT2G39795 AT2G40660 AT3G02650 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G09630 AT3G10530 ATPRMT3 AT3G13160 AT3G15140 AT3G15460 AT3G16780 RACK1C AT3G18600 TOM40 RPS10 AT3G23940 ATL5 CARA ATHD2A AT3G49080 ATEBP1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G57490 AT3G57940 AT3G58660 AT4G02930 AT4G04940 ATNDK1 AT4G17390 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G31810 AtLa1 AT4G35850 AT4G36580 AT5G02050 AT5G02870 AT5G07090 AT5G11240 ATHD2 PYRD OLI7 AT5G47210 ATRBP45A GR-RBP3 AT5G61880 AT5G64670
GO:0006221 pyrimidine nucleotide biosynthetic proce...	BP	5.817e-46	NFD5 AT1G23280 NFD3 AT1G48570 RACK1B ATNUC-L1 AT1G52930 NOP56 AT1G63660 AT1G64880 AT1G71850 AT1G79150 PPR596 AT2G15000 ASP1 HSP60-2 WDR55 AT2G35040 AT2G37020 AT2G39795 AT2G40660 AT3G02650 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G09630 AT3G10530 ATPRMT3 AT3G13160 AT3G15140 AT3G15460 AT3G16780 RACK1C AT3G18600 TOM40 RPS10 AT3G23940 ATL5 CARA ATHD2A AT3G49080 ATEBP1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G57490 AT3G57940 AT3G58660 AT4G02930 AT4G04940 ATNDK1 AT4G17390 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G31810 AtLa1 AT4G35850 AT4G36580 AT5G02050 AT5G02870 AT5G07090 AT5G11240 ATHD2 PYRD OLI7 AT5G47210 ATRBP45A GR-RBP3 AT5G61880 AT5G64670
GO:0006220 pyrimidine nucleotide metabolic process	BP	2.147e-45	NFD5 AT1G23280 NFD3 AT1G48570 RACK1B ATNUC-L1 AT1G52930 NOP56 AT1G63660 AT1G64880 AT1G71850 AT1G79150 PPR596 AT2G15000 ASP1 HSP60-2 WDR55 AT2G35040 AT2G37020 AT2G39795 AT2G40660 AT3G02650 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G09630 AT3G10530 ATPRMT3 AT3G13160 AT3G15140 AT3G15460 AT3G16780 RACK1C AT3G18600 TOM40 RPS10 AT3G23940 ATL5 CARA ATHD2A AT3G49080 ATEBP1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G57490 AT3G57940 AT3G58660 AT4G02930 AT4G04940 ATNDK1 AT4G17390 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G31810 AtLa1 AT4G35850 AT4G36580 AT5G02050 AT5G02870 AT5G07090 AT5G11240 ATHD2 PYRD OLI7 AT5G47210 ATRBP45A GR-RBP3 AT5G61880 AT5G64670
GO:0072528 pyrimidine-containing compound biosynthe...	BP	2.677e-44	NFD5 AT1G23280 NFD3 AT1G48570 RACK1B ATNUC-L1 AT1G52930 NOP56 AT1G63660 AT1G64880 AT1G71850 AT1G79150 PPR596 AT2G15000 ASP1 HSP60-2 WDR55 AT2G35040 AT2G37020 AT2G39795 AT2G40660 AT3G02650 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G09630 AT3G10530 ATPRMT3 AT3G13160 AT3G15140 AT3G15460 AT3G16780 RACK1C AT3G18600 TOM40 RPS10 AT3G23940 ATL5 CARA ATHD2A AT3G49080 ATEBP1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G57490 AT3G57940 AT3G58660 AT4G02930 AT4G04940 ATNDK1 AT4G17390 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G31810 AtLa1 AT4G35850 AT4G36580 AT5G02050 AT5G02870 AT5G07090 AT5G11240 ATHD2 PYRD OLI7 AT5G47210 ATRBP45A GR-RBP3 AT5G61880 AT5G64670
GO:1901576 organic substance biosynthetic process	BP	1.686e-43	ATGPAT2 emb2386 ATPHB2 RPS15 PDLP2 LIP2 AT1G05440 AT1G06790 AT1G07070 AT1G07210 ATPCNA1 AT1G07930 AT1G08360 ATSYP111 AT1G08845 AT1G09590 AT1G09690 AT1G10780 GAPC-2 AT1G13730 AT1G14060 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis AT1G15250 AtTLP8 HLL AT1G18540 NFD5 AT1G21340 AT1G21440 AT1G22440 PFL AT1G23280 RPL27A AT1G23410 AT1G25260 AT1G26470 AT1G26740 ANAC009 AT1G26880 RPL10B AT1G27400 ATIMD3 NFD3 AT1G32190 AT1G33120 AT1G34030 AT1G41880 ARP1 AT1G48570 RACK1B AT1G48830 ATNUC-L1 UBC20 PLT2 AT1G52930 GRI NOP56 ATMYB72 AT1G57660 AT1G57860 XW6 ATH7 ARR3 ARP2 AtLPLAT2 AT1G63660 AT1G64600 AT1G64880 AT1G67430 PAN ATELF5A-3 AT1G70600 ATWHY2 AT1G71850 AP40 AT1G74050 AT1G74060 NRP1 CYCB2;4 AT1G76470 AT1G77670 AT1G77750 ATGSTU20 AT1G79150 PPR596 AT1G80750 AT2G01250 AtPP2-B6 AtSOT1 AT2G05220 AT2G05320 AT2G09990 AT2G15000 AT2G17360 EMB2296 AT2G19730 AT2G19740 AT2G19750 AT2G20060 AT2G20420 AT2G20450 FLA6 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. AT2G21580 AT2G22230 AT2G25210 NPC2 NF-YB11 PGY1 AT2G27710 HDA13 ATSMO2 ATRPAC14 ATPCNA2 ASP1 AT2G31610 EMA1 AT2G31790 AT2G32220 HSP60-2 WDR55 AT2G34480 RPS14 AT2G35040 AT2G36160 AT2G36170 APG10 RPL24A AT2G37020 AT2G37190 ATRPS5B AT2G37600 AT2G39390 ATMTP11 ATRPL23A AT2G39795 AteIF3f AT2G40010 AT2G40510 AT2G40590 AT2G40660 BHLH100 AT2G41840 PYM AT2G42710 AT2G42720 RPL16A AT2G44040 AT2G44120 AT2G44860 ATSPX3 AT2G45710 AtSLD2 IAA20 AT2G47610 AT3G01410 AT3G01790 AT3G02080 AT3G02560 AT3G02650 AT3G02790 AT3G03130 AT3G03960 AT3G04230 RPSAb AT3G04840 AT3G04920 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G05560 AT3G06320 AT3G06680 NSN1 AT3G07110 AT3G07720 AT3G08030 AT3G09200 AT3G09630 AT3G09680 ADK1 AHB2 AT3G10530 AT3G10610 AT3G11250 AT3G11510 CYC2 AT3G11830 AML1 ATPRMT3 AtMYB10 AT3G13160 AT3G13580 AT3G13882 AT3G13940 AT3G14190 AT3G14390 AT3G14600 AT3G15140 ANAC054 AT3G15460 AT3G16080 AT3G16780 RFC3 RPL3P RACK1C AT3G18600 RLK902 AT3G18760 AT3G19500 BCAT4 TOM40 PLT1 ATPURC AT3G21330 AT3G22230 RPS10 AT3G23390 AT3G23930 AT3G23940 AT3G24830 ATL5 EDF3 AOC3 CYP71B15 CARA AT3G28900 BR6OX2 ATBZIP42 AT3G44590 ATHD2A AT3G45030 AT3G45710 ATPHS2 AT3G47370 AtMYB45 EMB1080 ATBBC1 AT3G49080 DMS3 AT3G49910 MYB77 AtDWF4 BEH1 AT3G50800 GATA18 AT3G51280 ATEBP1 AT3G52440 AT3G52580 EMB2167 RPL24 AT3G53430 AT3G53740 AT3G53870 AT3G53890 ASML1 AT3G54400 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATCDT1B ATPURM AT3G55170 RPL23A2 AT3G55750 AT3G56340 BHLH038 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G58700 AT3G59670 AT3G59890 AT3G60660 AT3G60770 AT3G61610 AT3G62870 EMB3127 AtMYB55 RGXT2 AT4G02230 AT4G02930 APR DES-1-LIKE AT4G04940 AT4G05400 ATNDK1 ATCPK4 AT4G10450 AT4G11120 AT4G12600 AT4G13170 ATLEUC1 CYP83A1 ATGRP2 AT4G14320 AT4G15000 CYP702A2 UGT84A1 AT4G16720 ATHB-2 AT4G17390 HAT1 AT4G18100 AT4G18440 SNI1 RPL16B AT4G23620 AT4G24830 ATPAP24 ATFIB2 AT4G25740 AT4G25890 ACS7 AT4G26230 AR192 AT4G28360 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 rps15ae MTO2 AT4G30180 AT4G30800 AT4G30840 NFD1 RPS6 AT4G31810 AtLa1 AT4G33420 RSL2 AT4G34555 AT4G34670 AT4G35850 AT4G36130 CYP84A1 AT4G36580 BEH2 AT4G37660 mtHsc70-1 ATBRI1 ATIPS1 AT5G01910 AT5G02050 AT5G02610 AT5G02870 GYRB2 SIR AT5G04800 ATNAS1 AT5G06360 AT5G07090 CYP75B1 AT5G08180 AT5G09500 AT5G09510 AtPPa6 EMB3010 AIL6 AT5G11240 AT5G11750 ATWRKY75 AT5G13140 AK TRA2 AAC2 AT5G13520 ATIMD1 AT5G15200 AT5G15520 ATRGP2 PSRP3/2 AtbZIP3 AT5G16070 AT5G16130 MEX1 AtMYB56 WOX12 AT5G18380 AT5G19730 ATSPX1 ATCPN21 AT5G22440 ATHD2 PYRD AT5G23535 RPS11-BETA AT5G23900 AT5G24840 AT5G25580 AT5G27330 AT5G27770 AT5G27850 AT5G28060 ATWRKY74 AT5G35530 OLI7 anac094 AT5G39850 AT5G40040 GPDHp POLA3 ATS AT5G42700 NF-YC13 AT5G45590 AT5G45775 AT5G46430 AT5G47210 AT5G47700 AT5G47930 AT5G48760 AT5G51310 HDG7 ATFBR1 AT5G52650 AT5G53070 AT5G53920 PTAC15 ATRBP45A ANQ1 AT5G56710 AT5G56940 AT5G57290 AT5G57785 RPB5C AT5G58420 BSK5 AT5G59070 AT5G59240 AT5G59850 AT5G60670 AT5G60710 COBL5 GR-RBP3 PDCB1 AT5G61170 AT5G61880 AT5G62210 AT5G62300 RPS28 AT5G64650 AT5G64670 ASN2 AT5G65300 AT5G66860 AT5G67200 AT5G67510
GO:0044249 cellular biosynthetic process	BP	3.228e-42	ATGPAT2 emb2386 ATPHB2 RPS15 PDLP2 LIP2 AT1G05440 AT1G06790 AT1G07070 AT1G07210 ATPCNA1 AT1G07930 AT1G08360 AT1G08845 AT1G09590 AT1G09690 AT1G10780 GAPC-2 AT1G13730 AT1G14060 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis AT1G15250 AtTLP8 HLL AT1G18540 NFD5 AT1G21340 AT1G21440 PFL AT1G23280 RPL27A AT1G23410 AT1G25260 AT1G26470 AT1G26740 ANAC009 AT1G26880 RPL10B AT1G27400 ATIMD3 NFD3 AT1G32190 AT1G33120 AT1G34030 AT1G41880 ARP1 AT1G48570 RACK1B AT1G48830 ATNUC-L1 UBC20 PLT2 AT1G52930 GRI NOP56 ATMYB72 AT1G57660 AT1G57860 XW6 ATH7 ARR3 ARP2 AtLPLAT2 AT1G63660 AT1G64600 AT1G64880 AT1G67430 PAN ATELF5A-3 AT1G70600 ATWHY2 AT1G71850 AP40 AT1G74050 AT1G74060 CYCB2;4 AT1G76470 AT1G77670 AT1G77750 GNR1 ATGSTU20 AT1G79150 PPR596 AT1G80750 AT2G01250 AtPP2-B6 AtSOT1 AT2G05220 AT2G09990 AT2G15000 AT2G17360 EMB2296 AT2G19730 AT2G19740 AT2G19750 AT2G20060 AT2G20420 AT2G20450 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. AT2G21580 AT2G22230 AT2G25210 NPC2 NF-YB11 PGY1 AT2G27710 HDA13 ATSMO2 TIM10 ATRPAC14 ATPCNA2 ASP1 AT2G31610 EMA1 AT2G31790 AT2G32220 HSP60-2 WDR55 AT2G34480 RPS14 AT2G35040 AT2G36160 AT2G36170 APG10 RPL24A AT2G37020 AT2G37190 ATRPS5B AT2G37600 AT2G39390 ATRPL23A AT2G39795 AteIF3f AT2G40010 AT2G40510 AT2G40590 AT2G40660 BHLH100 AT2G41840 PYM AT2G42710 AT2G42720 RPL16A AT2G44040 AT2G44120 AT2G44860 ATSPX3 AT2G45710 AtSLD2 IAA20 AT2G47610 AT3G01410 AT3G01790 AT3G02080 AT3G02560 AT3G02650 AT3G02790 AT3G03130 AT3G03960 AT3G04230 RPSAb AT3G04840 AT3G04920 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G05560 AT3G06320 AT3G06680 NSN1 AT3G07110 AT3G07720 AT3G08030 AT3G09200 AT3G09630 AT3G09680 ADK1 AHB2 AT3G10530 AT3G10610 AT3G11250 AT3G11510 CYC2 AML1 ATPRMT3 AtMYB10 AT3G13160 AT3G13580 AT3G13882 AT3G13940 AT3G14190 AT3G14390 AT3G14600 mMDH2 AT3G15140 ANAC054 AT3G15460 AT3G16080 AT3G16780 RFC3 RPL3P RACK1C AT3G18600 RLK902 AT3G18760 AT3G19500 BCAT4 TOM40 PLT1 ATPURC AT3G21330 AT3G22230 RPS10 AT3G23390 AT3G23930 AT3G23940 AT3G24830 ATL5 EDF3 AOC3 CYP71B15 CARA AT3G28900 ATBZIP42 AT3G44590 ATHD2A AT3G45030 AT3G45710 ATPHS2 AT3G47370 AtMYB45 EMB1080 ATBBC1 AT3G49080 DMS3 AT3G49910 MYB77 BEH1 AT3G50800 GATA18 AT3G51280 ATEBP1 AT3G52440 AT3G52580 EMB2167 RPL24 AT3G53430 AT3G53740 AT3G53870 AT3G53890 ATPUMP1 ASML1 AT3G54400 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATCDT1B ATPURM AT3G55170 RPL23A2 AT3G55750 AT3G56340 BHLH038 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G58700 AT3G59670 AT3G59890 AT3G60660 AT3G60770 AT3G61610 AT3G62870 EMB3127 AtMYB55 RGXT2 AT4G02230 AT4G02930 APR DES-1-LIKE AT4G04940 AT4G05400 ATNDK1 ATCPK4 AT4G10450 AT4G11120 AT4G12600 AT4G13170 ATLEUC1 CYP83A1 ATGRP2 AT4G14320 AT4G15000 CYP702A2 AT4G16720 ATHB-2 AT4G17390 HAT1 AT4G18100 AT4G18440 SNI1 RPL16B AT4G23620 AT4G24830 ATPAP24 ATFIB2 AT4G25740 AT4G25890 ACS7 AT4G26230 AR192 AT4G28360 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 rps15ae MTO2 AT4G30180 AT4G30800 AT4G30840 NFD1 RPS6 AT4G31810 AtLa1 RSL2 AT4G34555 AT4G34670 AT4G35850 AT4G36130 CYP84A1 AT4G36580 BEH2 AT4G37660 mtHsc70-1 ATIPS1 AT5G01910 AT5G02050 AT5G02610 AT5G02870 GYRB2 SIR AT5G04800 ATNAS1 AT5G06360 AT5G07090 AT5G08180 AT5G09500 AT5G09510 AtPPa6 EMB3010 AIL6 AT5G11240 AT5G11750 ATWRKY75 AT5G13140 AK TRA2 AT5G13520 ATIMD1 AT5G15200 AT5G15520 ATRGP2 PSRP3/2 AtbZIP3 AT5G16130 MEX1 AtMYB56 WOX12 AT5G18380 ATSPX1 ATCPN21 AT5G22440 ATHD2 PYRD AT5G23535 RPS11-BETA AT5G23900 AT5G24840 AT5G25580 AT5G27330 AT5G27770 AT5G27850 AT5G28060 ATWRKY74 AT5G35530 OLI7 anac094 AT5G39850 AT5G40040 POLA3 ATS AT5G42700 NF-YC13 AT5G45590 AT5G45775 AT5G46430 AT5G47210 AT5G47700 AT5G47930 AT5G48760 TIM8 AT5G51310 HDG7 ATFBR1 AT5G52650 AT5G53070 AT5G53920 PTAC15 ATRBP45A ANQ1 AT5G56710 AT5G56940 AT5G57290 RPB5C AT5G58420 BSK5 AT5G59070 AT5G59240 AT5G59850 AT5G60670 AT5G60710 COBL5 GR-RBP3 PDCB1 AT5G61170 AT5G61880 AT5G62210 AT5G62300 RPS28 AT5G64650 AT5G64670 ASN2 AT5G65300 AT5G66860 AT5G67200 AT5G67510
GO:0009058 biosynthetic process	BP	1.742e-41	ATGPAT2 emb2386 ATPHB2 RPS15 PDLP2 LIP2 AT1G05440 AT1G06790 AT1G07070 AT1G07210 ATPCNA1 AT1G07930 AT1G08360 ATSYP111 AT1G08845 AT1G09590 AT1G09690 AT1G10780 GAPC-2 AT1G13730 AT1G14060 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis AT1G15250 AtTLP8 HLL AT1G18540 NFD5 AT1G21340 AT1G21440 AT1G22440 PFL AT1G23280 RPL27A AT1G23410 AT1G25260 AT1G26470 AT1G26740 ANAC009 AT1G26880 RPL10B AT1G27400 ATIMD3 NFD3 AT1G32190 AT1G33120 AT1G34030 AT1G41880 ARP1 AT1G48570 RACK1B AT1G48830 ATNUC-L1 UBC20 PLT2 AT1G52930 GRI NOP56 ATMYB72 AT1G57660 AT1G57860 XW6 ATH7 ARR3 ARP2 AtLPLAT2 AT1G63660 AT1G64600 AT1G64880 AT1G67430 PAN ATELF5A-3 AT1G70600 ATWHY2 AT1G71850 AP40 AT1G74050 AT1G74060 NRP1 CYCB2;4 AT1G76470 AT1G77670 AT1G77750 GNR1 ATGSTU20 AT1G79150 PPR596 AT1G80750 AT2G01250 AtPP2-B6 AtSOT1 AT2G05220 AT2G05320 AT2G09990 AT2G15000 AT2G17360 EMB2296 AT2G19730 AT2G19740 AT2G19750 AT2G20060 AT2G20420 AT2G20450 FLA6 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. AT2G21580 AT2G22230 AT2G25210 NPC2 NF-YB11 PGY1 AT2G27710 HDA13 ATSMO2 TIM10 ATRPAC14 ATPCNA2 ASP1 AT2G31610 EMA1 AT2G31790 AT2G32220 HSP60-2 WDR55 AT2G34480 RPS14 AT2G35040 AT2G36160 AT2G36170 APG10 RPL24A AT2G37020 AT2G37190 ATRPS5B AT2G37600 AT2G39390 ATMTP11 ATRPL23A AT2G39795 AteIF3f AT2G40010 AT2G40510 AT2G40590 AT2G40660 BHLH100 AT2G41840 PYM AT2G42710 AT2G42720 RPL16A AT2G44040 AT2G44120 AT2G44860 ATSPX3 AT2G45710 AtSLD2 IAA20 AT2G47610 AT3G01410 AT3G01790 AT3G02080 AT3G02560 AT3G02650 AT3G02790 AT3G03130 AT3G03960 AT3G04230 RPSAb AT3G04840 AT3G04920 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G05560 AT3G06320 AT3G06680 NSN1 AT3G07110 AT3G07720 AT3G08030 AT3G09200 AT3G09630 AT3G09680 ADK1 AHB2 AT3G10530 AT3G10610 AT3G11250 AT3G11510 CYC2 AT3G11830 AML1 ATPRMT3 AtMYB10 AT3G13160 AT3G13580 AT3G13882 AT3G13940 AT3G14190 AT3G14390 AT3G14600 mMDH2 AT3G15140 ANAC054 AT3G15460 AT3G16080 AT3G16780 RFC3 RPL3P RACK1C AT3G18600 RLK902 AT3G18760 AT3G19500 BCAT4 TOM40 PLT1 ATPURC AT3G21330 AT3G22230 RPS10 AT3G23390 AT3G23930 AT3G23940 AT3G24830 ATL5 EDF3 AOC3 CYP71B15 CARA AT3G28900 BR6OX2 ATBZIP42 AT3G44590 ATHD2A AT3G45030 AT3G45710 ATPHS2 AT3G47370 AtMYB45 EMB1080 ATBBC1 AT3G49080 DMS3 AT3G49910 MYB77 AtDWF4 BEH1 AT3G50800 GATA18 AT3G51280 ATEBP1 AT3G52440 AT3G52580 EMB2167 RPL24 AT3G53430 AT3G53740 AT3G53870 AT3G53890 ATPUMP1 ASML1 AT3G54400 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATCDT1B ATPURM AT3G55170 RPL23A2 AT3G55750 AT3G56340 BHLH038 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G58700 AT3G59670 AT3G59890 AT3G60660 AT3G60770 AT3G61610 AT3G62870 EMB3127 AtMYB55 RGXT2 AT4G02230 AT4G02930 APR DES-1-LIKE AT4G04940 AT4G05400 ATNDK1 ATCPK4 AT4G10450 AT4G11120 AT4G12130 AT4G12600 AT4G13170 ATLEUC1 CYP83A1 ATGRP2 AT4G14320 AT4G15000 CYP702A2 UGT84A1 AT4G16720 ATHB-2 AT4G17390 HAT1 AT4G18100 AT4G18440 SNI1 RPL16B AT4G23620 AT4G24830 ATPAP24 ATFIB2 AT4G25740 AT4G25890 ACS7 AT4G26230 AR192 AT4G28360 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 rps15ae MTO2 AT4G30180 AT4G30800 AT4G30840 NFD1 RPS6 AT4G31810 AtLa1 AT4G33420 RSL2 AT4G34555 AT4G34670 AT4G35850 AT4G36130 CYP84A1 AT4G36580 BEH2 AT4G37660 mtHsc70-1 ATBRI1 ATIPS1 AT5G01910 AT5G02050 AT5G02610 AT5G02870 GYRB2 SIR AT5G04800 ATNAS1 AT5G06360 AT5G07090 CYP75B1 AT5G08180 AT5G09500 AT5G09510 AtPPa6 EMB3010 AIL6 AT5G11240 AT5G11750 ATWRKY75 AT5G13140 AK TRA2 AAC2 AT5G13520 ATIMD1 AT5G15200 AT5G15520 ATRGP2 PSRP3/2 AtbZIP3 AT5G16070 AT5G16130 MEX1 AtMYB56 WOX12 AT5G18380 AT5G19730 ATSPX1 ATCPN21 AT5G22440 ATHD2 PYRD AT5G23535 RPS11-BETA AT5G23900 AT5G24840 AT5G25580 AT5G27330 AT5G27770 AT5G27850 AT5G28060 ATWRKY74 AT5G35530 OLI7 anac094 AT5G39850 AT5G40040 GPDHp POLA3 ATS AT5G42700 NF-YC13 AT5G45590 AT5G45775 AT5G46430 AT5G47210 AT5G47700 AT5G47930 AT5G48760 TIM8 AT5G51310 HDG7 ATFBR1 AT5G52650 AT5G53070 AT5G53920 PTAC15 ATRBP45A ANQ1 AT5G56710 AT5G56940 AT5G57290 AT5G57785 RPB5C AT5G58420 BSK5 AT5G59070 AT5G59240 AT5G59850 AT5G60670 AT5G60710 COBL5 GR-RBP3 PDCB1 AT5G61170 AT5G61880 AT5G62210 AT5G62300 RPS28 AT5G64650 AT5G64670 ASN2 AT5G65300 AT5G66860 AT5G67200 AT5G67510
GO:0044267 cellular protein metabolic process	BP	6.653e-41	emb2386 ATPHB2 RPS15 PDLP2 LIP2 ATPRMT10 AT1G05440 AT1G07070 AT1G07210 ATPCNA1 AT1G07930 AT1G08360 AT1G08845 AT1G09590 AT1G09690 AT1G10780 GAPC-2 AT1G14060 DECOY CPN10 AT1G15250 HLL AT1G18540 PFL AT1G23100 RPL27A AT1G23410 AT1G25260 AT1G26740 AT1G26880 RPL10B AT1G27400 NFD3 AT1G32190 AT1G33120 AT1G34030 AT1G41880 ARP1 RACK1B AT1G48830 UBC20 AT1G57660 AT1G57860 XW6 ATH7 ARP2 AT1G64600 AT1G64880 AT1G66620 AT1G67430 ATELF5A-3 AT1G69990 AT1G70600 AP40 AT1G74050 AT1G74060 AT1G74490 CYCB2;4 AHL29 ATPDI6 AT1G77750 AT1G80750 AT2G01250 AtPP2-B6 AT2G05220 AT2G09990 AT2G17360 EMB2296 ATPRMT1A AT2G19730 AT2G19740 AT2G19750 AT2G20060 AT2G20420 AT2G20450 AT2G21580 AT2G25210 PGY1 AT2G27710 ATPCNA2 AT2G31610 AT2G32220 HSP60-2 AT2G34480 RPS14 AT2G36160 AT2G36170 RPL24A AT2G37190 ATRPS5B AT2G37600 AT2G37990 AT2G38160 HTA8 AT2G39390 ATRPL23A AT2G39795 AteIF3f AT2G40010 AT2G40510 AT2G40590 AT2G40660 AT2G41840 AT2G42710 RPL16A AT2G44120 AT2G44860 cycp3;1 AT2G45710 AT2G46850 AT2G47610 AtENODL16 AT3G01790 AT3G02080 AT3G02560 AT3G02650 AT3G03920 AT3G03960 AT3G04230 RPSAb AT3G04840 AT3G04920 AT3G05560 AT3G06320 AT3G06680 AT3G07110 AtHsp90-6 AT3G09200 AT3G09630 AT3G09680 AT3G09700 AT3G10610 AT3G11250 AT3G11510 CYC2 AT3G11830 AML1 ATPRMT3 AT3G12340 AtMYB10 AT3G13160 AT3G13580 HSP60-3A AT3G13882 AT3G14190 AT3G14600 AT3G16080 AT3G16780 RFC3 RPL3P AT3G18600 ATPUB29 RLK902 AT3G18760 AT3G22230 RPS10 AT3G23390 AT3G23930 HSP60 AT3G24830 ATL5 AT3G28900 AT3G44590 AT3G45030 AT3G47370 EMB1080 ATBBC1 AT3G49080 DMS3 AT3G49810 AT3G49910 AT3G50230 AT3G50800 AT3G51280 ATEBP1 AT3G52580 EMB2167 RPL24 AT3G53430 AT3G53740 AT3G53870 AT3G53890 ATPDI1 AT3G55170 RPL23A2 AT3G55605 AT3G55750 ROC2 IMK3 AT3G56340 AT3G57000 AT3G57490 AT3G58660 AT3G58690 AT3G58700 AT3G60770 AT3G61610 AT3G62870 AT4G02230 AT4G02800 AT4G02930 AT4G05400 ATCPK4 AT4G10450 AT4G11120 AT4G13170 AT4G14320 AT4G15000 AT4G16720 AT4G17390 AT4G18100 SNI1 RPL16B AT4G23620 ATFKBP53 AT4G25740 AT4G25890 AT4G26230 AR192 RRP41L AT4G28360 AT4G29410 rps15ae ATPRMT11 AT4G30800 NFD1 RPS6 AT4G31810 AtLa1 AT4G34555 AT4G34670 AT4G35850 AT4G36130 AT4G37660 mtHsc70-1 AT5G02610 GSTL1 AT5G02870 AT5G04800 AT5G06360 AT5G07090 AT5G08180 AT5G09500 AT5G09510 EMB3010 AT5G11750 AAC2 AT5G13520 AT5G15200 AT5G15520 PSRP3/2 AT5G16070 AT5G16130 TOZ AT5G18380 AT5G22440 ATHD2 PYRD AT5G23535 RPS11-BETA AT5G23900 AT5G25580 LON1 AT5G27770 AT5G27850 AT5G28060 AT5G35530 OLI7 AT5G39850 AT5G40040 POLA3 AT5G45590 AT5G45775 AT5G46430 AT5G47700 AT5G47930 GFA2 AT5G48760 HDG7 ATFBR1 AT5G52650 AT5G53070 AT5G53920 OLI2 ANQ1 AT5G56710 AT5G56940 AT5G57290 AT5G58420 BSK5 AT5G59240 AT5G59850 AT5G60670 AT5G60710 GR-RBP3 AT5G61170 AT5G61880 AT5G62290 AT5G62300 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. RPS28 AT5G64650 AT5G64670 AT5G64680 AT5G65920 AT5G66060 AT5G66080 AT5G66860 AT5G67200 AT5G67510
GO:0072527 pyrimidine-containing compound metabolic...	BP	8.173e-41	NFD5 AT1G23280 NFD3 AT1G48570 RACK1B ATNUC-L1 AT1G52930 NOP56 AT1G63660 AT1G64880 AT1G71850 AT1G79150 PPR596 AT2G15000 ASP1 HSP60-2 WDR55 AT2G35040 AT2G37020 AT2G39795 AT2G40660 AT3G02650 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G09630 AT3G10530 ATPRMT3 AT3G13160 AT3G15140 AT3G15460 AT3G16780 RACK1C AT3G18600 TOM40 RPS10 AT3G23940 ATL5 CARA ATHD2A AT3G49080 ATEBP1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G57490 AT3G57940 AT3G58660 AT4G02930 AT4G04940 ATNDK1 AT4G17390 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G31810 AtLa1 AT4G35850 AT4G36580 AT5G02050 AT5G02870 AT5G07090 AT5G11240 ATHD2 PYRD OLI7 AT5G47210 ATRBP45A GR-RBP3 AT5G61880 AT5G64670
GO:0010467 gene expression	BP	1.106e-40	emb2386 RPS15 AT1G04590 AT1G05440 AT1G06790 AT1G07070 AT1G07210 ATPCNA1 AT1G07930 AT1G08360 AT1G08845 AT1G09590 AT1G09690 DRB1 AT1G15250 AtTLP8 HLL AT1G18540 AT1G21340 PFL RPL27A AT1G23410 AT1G25260 AT1G26470 AT1G26740 ANAC009 AT1G26880 RPL10B AT1G27400 NFD3 AT1G33120 AT1G34030 AT1G41880 ARP1 RACK1B AT1G48830 PLT2 ATMYB72 AT1G57660 AT1G57860 XW6 ARR3 ARP2 AT1G64600 AT1G64880 AT1G67430 PAN ATELF5A-3 AT1G70600 ATWHY2 AP40 AT1G74050 AT1G74060 CYCB2;4 AT1G77750 AT1G79150 AT1G80750 AT2G01250 AT2G05220 AT2G09990 AT2G17360 EMB2296 AT2G19730 AT2G19740 AT2G19750 AT2G20060 AT2G20450 AT2G21580 AT2G25210 NF-YB11 PGY1 AT2G27710 HDA13 ATRPAC14 ATPCNA2 AT2G31610 EMA1 AT2G32220 AT2G34480 RPS14 AT2G36160 AT2G36170 RPL24A AT2G37190 ATRPS5B AT2G37600 AT2G37990 HTA8 WTF9 AT2G39390 ATRPL23A AteIF3f AT2G40010 AT2G40510 AT2G40590 AT2G40660 BHLH100 AT2G41840 AT2G42710 AT2G42720 RPL16A AT2G44120 AT2G44860 ATSPX3 AT2G45710 IAA20 AT2G47610 AT3G01410 AT3G01790 AT3G02080 AT3G02560 AT3G02790 AT3G04230 RPSAb AT3G04840 AT3G04920 AT3G05560 AT3G06320 AT3G06680 NSN1 AT3G07110 AT3G07750 AT3G09200 AT3G09630 AT3G09680 AT3G10610 AT3G11250 AT3G11510 CYC2 AML1 AtMYB10 AT3G13580 AT3G13882 AT3G13940 AT3G14190 AT3G14600 ANAC054 AT3G16080 AT3G16780 RFC3 RPL3P RLK902 AT3G18760 AT3G19500 PLT1 AT3G21330 AT3G22230 RPS10 AT3G23390 AT3G24830 ATL5 EDF3 AT3G28900 ATBZIP42 AT3G44590 AT3G45030 AT3G47370 BIR6 AtMYB45 EMB1080 ATBBC1 AT3G49080 DMS3 AT3G49910 MYB77 BEH1 GATA18 AT3G51280 AT3G52440 AT3G52580 EMB2167 RPL24 AT3G53430 AT3G53740 AT3G53870 AT3G53890 ASML1 HTA11 AT3G55170 RPL23A2 AT3G55750 AT3G56340 BHLH038 AtCBF5 AT3G57490 AT3G58660 AT3G58700 AT3G60770 AT3G62870 OTP86 AtMYB55 AT4G02230 AT4G02930 AT4G04940 AT4G05400 AT4G10450 AT4G11120 AT4G13170 ATGRP2 AT4G14320 AT4G15000 AT4G16720 ATHB-2 AT4G17390 HAT1 AT4G18100 SNI1 RPL16B AT4G23620 ATPAP24 AT4G25740 AT4G25890 AT4G26230 RRP41L AT4G28360 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 rps15ae AT4G30180 RUXF AT4G30800 NFD1 RPS6 AtLa1 RSL2 AT4G34555 AT4G34670 AT4G36130 BEH2 AT4G37660 AT5G02610 AT5G02870 AT5G04800 AT5G06360 AT5G07090 AT5G09500 AT5G09510 EMB3010 AIL6 AT5G11750 ATWRKY75 AT5G13520 AT5G14580 AT5G15200 AT5G15520 PSRP3/2 AtbZIP3 AT5G16130 TOZ AtMYB56 WOX12 AT5G18380 ATSPX1 AT5G22100 AT5G22440 ATHD2 PYRD AT5G23535 RPS11-BETA AT5G23900 AT5G25580 AT5G27770 AT5G27850 AT5G28060 ATWRKY74 AT5G35530 OLI7 anac094 AT5G39850 AT5G40040 POLA3 ATS AT5G42700 NF-YC13 AT5G45590 AT5G45775 AT5G46430 AT5G47700 AT5G47930 AT5G48360 AT5G48760 At-RS41 HDG7 ATFBR1 AT5G52650 AT5G53070 PTAC15 ANQ1 AT5G56710 AT5G56940 AT5G57290 RPB5C AT5G58420 AT5G59240 AT5G59850 AT5G60670 AT5G61170 AT5G61880 AT5G62290 AT5G62300 RPS28 AT5G64650 AT5G64670 AT5G64680 AT5G66860 AT5G67200 AT5G67510
GO:0009987 cellular process	BP	7.044e-39	ATGPAT2 emb2386 AtTRM82 AT1G03830 ATPHB2 RPS15 PDLP2 AT1G04590 LIP2 ATPRMT10 AT1G05440 UGT1 UGT74E2 AT1G06790 AT1G07070 AT1G07210 ATPCNA1 HTB1 AT1G07820 AT1G07930 AT1G08220 AT1G08360 ATSYP111 AT1G08845 AT1G09200 AT1G09470 AT1G09590 AT1G09690 DRB1 AT1G09800 AT1G10780 AT1G12600 GAPC-2 ATPSK1 RGF2 AT1G13730 AT1G14060 DECOY ATXTH28 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis CPN10 AT1G15250 AT1G15420 AT1G15480 AtTLP8 HLL ATLP-1 AT1G18540 NRP2 AT1G18850 NFD5 AT1G20370 AT1G21340 AT1G21440 AT1G22440 PFL AT1G23100 AT1G23280 RPL27A AT1G23410 AT1G25260 AT1G26470 AT1G26740 AT-EXP10 ANAC009 AT1G26880 RPL10B ATGSTU14 AT1G27400 AT1G28190 AtG3Pp3 ATIMD3 NFD3 AT1G32190 AT1G33120 AT1G33340 AT1G34030 AT1G34510 AT1G41880 ARP1 AT1G48570 RACK1B AT1G48830 ATNUC-L1 CLE11 AT1G50110 AT1G50400 UBC20 PLT2 AT1G51380 AT1G52930 GRI G-H2AX AT1G54770 NOP56 ATMYB72 AT1G56680 AT1G57660 AT1G57860 XW6 ATH7 ARR3 TIM13 ARP2 AtLPLAT2 AT1G63660 AT1G63720 IMP4 AT1G64600 AT1G64880 AtRHD6 AT1G66620 AT1G67430 PAN AT1G69210 ATELF5A-3 AT1G69990 AT1G70600 ATWHY2 AT1G71850 AT1G71870 AP40 CLE1 AT1G73940 ENO1 AT1G74050 AT1G74060 AT1G74240 AT1G74490 ATBS1 NRP1 CYCB2;4 AT1G76470 AHL29 ATPDI6 LYM3 AT1G77670 AT1G77750 GNR1 ATGSTU20 AT1G79150 GAPCP-1 PPR596 AT1G80750 AT2G01250 AtPP2-B6 AtSOT1 AT2G04090 AT2G04100 AT2G05220 AT2G09990 AT2G11910 AT2G15000 AtTic21 UGT73B4 PIP2;8 AT2G17360 EMB2296 AT2G19385 ATPRMT1A AT2G19730 AT2G19740 AT2G19750 AT2G20060 AT2G20420 AT2G20450 EDA27 FLA6 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. AT2G20710 AT2G21580 AT2G22230 MEL4 ATMES1 AT2G25210 NPC2 NF-YB11 PGY1 AT2G27710 HDA13 HIS4 AT2G28780 ATSMO2 TIM10 ATRPAC14 ATPCNA2 ASP1 EMB2785 CLE4 CLE7 AT2G31610 EMA1 AT2G31790 AT2G32220 HSP60-2 WDR55 AT2G34480 RPS14 AT2G35040 AT2G35790 AT2G36160 AT2G36170 APG10 RPL24A AT2G37020 AT2G37190 ATRPS5B AT2G37470 AT2G37600 AT2G37990 AT2G38160 HTA8 WTF9 AT2G39390 ATMTP11 ATRPL23A AT2G39795 AteIF3f AT2G40010 AT2G40510 AT2G40590 AT2G40660 BHLH100 AT2G41380 AT2G41730 AT2G41840 PYM AT2G42710 AT2G42720 RPL16A AT2G44040 AT2G44120 AT2G44860 cycp3;1 ATSPX3 AT2G45710 AtSLD2 AT2G46850 IAA20 AT2G47610 AtENODL16 AT3G01410 AT3G01790 AT3G02080 AT3G02560 AT3G02650 AT3G02790 AT3G03130 AT3G03920 AT3G03960 AT3G04230 RPSAb AT3G04840 AT3G04920 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G05560 AT3G05810 AT3G06320 AT3G06680 NSN1 AT3G07110 AtRABA5b AT3G07720 AT3G07750 AtHsp90-6 AT3G08030 iPGAM2 AT3G09200 AT3G09630 AT3G09680 AT3G09700 ADK1 AHB2 AT3G10530 AT3G10610 ATMES17 AT3G11250 AT3G11510 CYC2 AT3G11830 AML1 ATPRMT3 AT3G12340 NANA AtMYB10 AT3G12900 AT3G13160 AT3G13230 AT3G13580 HSP60-3A AT3G13882 AT3G13940 AT3G14190 AT3G14390 AT3G14600 RIP1 mMDH2 AT3G15140 ANAC054 AT3G15460 AT3G16080 ATRALF23 AT3G16780 RFC3 RPL3P RACK1C AT3G18600 ATPUB29 RLK902 AT3G18760 AT3G19440 AT3G19500 BCAT4 TOM40 AT3G20240 PLT1 ATPURC AT3G21330 AT3G22230 RPS10 AT3G22660 AT3G23390 AT3G23620 AtGRP4 AT3G23930 AT3G23940 HSP60 AT3G24830 ATL5 IDL1 EDF3 AOC3 CYP71B15 ATPHB4 CARA AT3G28900 ATBZIP42 AT3G44240 AT3G44590 ATHD2A AT3G45030 AT3G45710 ATPHS2 AT3G47370 BIR6 AtMYB45 EMB1080 ATBBC1 AT3G49080 DMS3 AT3G49320 AT3G49630 ATBCAT-3 AT3G49810 AT3G49910 AT3G49960 MYB77 AT3G50230 AtDWF4 BEH1 AT3G50800 GATA18 AT3G51280 ATEBP1 AT3G52440 AT3G52580 EMB2167 RPL24 AT3G53220 AT3G53430 AT3G53740 AT3G53870 AT3G53890 ATPUMP1 TBL36 ASML1 AT3G54400 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis HTA11 ATCDT1B ATPDI1 ATPURM AT3G55170 RPL23A2 AT3G55605 AT3G55750 ROC2 ATFER3 IMK3 AT3G56340 BHLH038 AT3G57000 AtCBF5 AT3G57490 AT3G57940 AT3G58060 AT3G58610 AT3G58660 AT3G58690 AT3G58700 ATMTP3 PMD1 AT3G59670 AT3G59890 AT3G60660 AT3G60770 AT3G61610 ATGSTF13 AT3G62870 AT3G62930 OTP86 GAE3 EMB3127 AtMYB55 RGXT2 AT4G01990 AT4G02230 RHS13 AT4G02800 AT4G02930 AT4G03100 APR DES-1-LIKE AT4G04940 AT4G05400 ATNDK1 ATCPK4 AT4G10450 AT4G11120 AT4G12130 AT4G12600 AT4G13170 AT4G13210 ATLEUC1 CYP83A1 ATGRP2 AT4G14320 AT4G15000 CYP702A2 AT4G15640 AT4G15660 AT4G15830 AT4G16720 ATHB-2 AT4G17390 HAT1 AT4G17720 AT4G18100 AT4G18440 SNI1 RPL16B ATIRT1 MORF1 APR3 AT4G23620 AT4G24830 ATPAP24 TPD1 AtG3Pp2 ATFKBP53 ATFIB2 AT4G25730 AT4G25740 AT4G25790 ATXTH14 AT4G25890 ATNAP1;1 ACS7 AT4G26230 AT4G26600 AR192 RRP41L AT4G28360 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G28820 ATXTH26 ARAC7 ADS1 AT4G29410 rps15ae ATPRMT11 MTO2 AT4G30180 RUXF MERI-5 AT4G30320 BRS1 AT4G30800 AT4G30840 NFD1 AT4G31360 RPS6 AT4G31810 AtENODL15 CYP82C4 AtLa1 AT4G33420 RSL2 AT4G34555 AT4G34670 AT4G35850 AT4G36130 CYP84A1 AT4G36580 BEH2 AT4G37660 mtHsc70-1 ATBRI1 ATIPS1 AT5G01910 AT5G02050 AT5G02610 GSTL1 AT5G02870 TFL-1 GYRB2 SIR AT5G04800 ATNAS1 AT5G06360 AT5G06630 AT5G07090 ATGRP19 AT5G08180 AT5G08400 LAC14 AtmtOM64 AT5G09500 AT5G09510 AtPPa6 EMB3010 AT5G10390 AT5G10400 AIL6 AT5G11240 AT5G11750 AT5G12940 ATWRKY75 AT5G13140 AK TRA2 AAC2 AT5G13520 AT5G13830 ATIMD1 AT5G14580 AT5G14600 ATVDAC3 AT5G15200 AT5G15520 ATRGP2 AT5G15750 PSRP3/2 AtbZIP3 AT5G16070 AT5G16130 TOZ MEX1 AT5G17630 AtMYB56 WOX12 AT5G18380 similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase AT5G19730 ATSPX1 AT5G20160 ATCPN21 AT5G20950 AT5G22100 AT5G22440 ATHD2 H2B PYRD AT5G23535 RPS11-BETA AT5G23900 AT5G24840 AtENODL13 AT5G25580 AT5G26200 LON1 AT5G27330 HTA7 AT5G27770 AT5G27850 AT5G28060 ATWRKY74 AT5G35530 BGLU42 AT5G38200 Encodes a putative amino acid transporter. AT5G38890 OLI7 anac094 AT5G39850 AT5G40040 GPDHp ATPHB3 BTI3 POLA3 AT5G42150 ATS AT5G42700 NF-YC13 AtPP2-A8 AT5G45590 AT5G45700 AT5G45775 AT5G46430 AT5G47210 AT5G47700 AT5G47930 GFA2 AT5G48360 AT5G48760 TIM8 AT5G51310 At-RS41 HDG7 AT5G52380 ATFBR1 AT5G52650 AT5G53070 AT5G53920 PTAC15 ATRBP45A OLI2 ANQ1 AT5G56710 AT5G56940 RID2 AT5G57290 AT5G57480 RPB5C AT5G58420 PMR5 BSK5 AT5G59070 AT5G59240 AT5G59850 AT5G60670 AT5G60710 ATNRT2.4 COBL5 GR-RBP3 PDCB1 AT5G61170 AT5G61880 AT5G62210 AT5G62290 AT5G62300 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. ATFP3 RPS28 AT5G64650 AT5G64670 AT5G64680 ASN2 AT5G65300 AT5G65920 AT5G66060 AT5G66080 AT5G66860 AT5G67200 RHS19 AT5G67510
GO:0009165 nucleotide biosynthetic process	BP	1.179e-38	ATPHB2 ATPCNA1 AT1G13730 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis NFD5 AT1G23280 AT1G23410 NFD3 AT1G48570 RACK1B ATNUC-L1 AT1G52930 NOP56 ARP2 AT1G63660 AT1G64880 AT1G71850 AT1G79150 PPR596 AT2G15000 HDA13 ASP1 EMA1 HSP60-2 WDR55 AT2G35040 AT2G37020 AT2G39795 AT2G40660 AT3G02650 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G09630 AT3G10530 AT3G10610 ATPRMT3 AT3G13160 AT3G15140 AT3G15460 AT3G16780 RACK1C AT3G18600 TOM40 ATPURC RPS10 AT3G23940 ATL5 CARA ATHD2A AT3G49080 ATEBP1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G56340 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G59670 AT4G02930 AT4G04940 ATNDK1 AT4G12600 AT4G17390 AT4G18440 AT4G24830 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G31810 AtLa1 AT4G35850 AT4G36580 mtHsc70-1 AT5G02050 AT5G02870 AT5G07090 AT5G08180 AT5G11240 ATHD2 PYRD AT5G24840 AT5G27330 OLI7 AT5G47210 ATRBP45A AT5G59240 GR-RBP3 AT5G61880 AT5G64670
GO:1901293 nucleoside phosphate biosynthetic proces...	BP	1.632e-38	ATPHB2 ATPCNA1 AT1G13730 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis NFD5 AT1G23280 AT1G23410 NFD3 AT1G48570 RACK1B ATNUC-L1 AT1G52930 NOP56 ARP2 AT1G63660 AT1G64880 AT1G71850 AT1G79150 PPR596 AT2G15000 HDA13 ASP1 EMA1 HSP60-2 WDR55 AT2G35040 AT2G37020 AT2G39795 AT2G40660 AT3G02650 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G09630 AT3G10530 AT3G10610 ATPRMT3 AT3G13160 AT3G15140 AT3G15460 AT3G16780 RACK1C AT3G18600 TOM40 ATPURC RPS10 AT3G23940 ATL5 CARA ATHD2A AT3G49080 ATEBP1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G56340 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G59670 AT4G02930 AT4G04940 ATNDK1 AT4G12600 AT4G17390 AT4G18440 AT4G24830 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G31810 AtLa1 AT4G35850 AT4G36580 mtHsc70-1 AT5G02050 AT5G02870 AT5G07090 AT5G08180 AT5G11240 ATHD2 PYRD AT5G24840 AT5G27330 OLI7 AT5G47210 ATRBP45A AT5G59240 GR-RBP3 AT5G61880 AT5G64670
GO:0044237 cellular metabolic process	BP	3.292e-38	ATGPAT2 emb2386 AtTRM82 AT1G03830 ATPHB2 RPS15 PDLP2 AT1G04590 LIP2 ATPRMT10 AT1G05440 UGT1 UGT74E2 AT1G06790 AT1G07070 AT1G07210 ATPCNA1 AT1G07930 AT1G08360 ATSYP111 AT1G08845 AT1G09590 AT1G09690 DRB1 AT1G09800 AT1G10780 GAPC-2 AT1G13730 AT1G14060 DECOY ATXTH28 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis CPN10 AT1G15250 AT1G15480 AtTLP8 HLL AT1G18540 AT1G18850 NFD5 AT1G20370 AT1G21340 AT1G21440 PFL AT1G23100 AT1G23280 RPL27A AT1G23410 AT1G25260 AT1G26470 AT1G26740 ANAC009 AT1G26880 RPL10B ATGSTU14 AT1G27400 ATIMD3 NFD3 AT1G32190 AT1G33120 AT1G34030 AT1G41880 ARP1 AT1G48570 RACK1B AT1G48830 ATNUC-L1 AT1G50110 AT1G50400 UBC20 PLT2 AT1G52930 GRI G-H2AX NOP56 ATMYB72 AT1G56680 AT1G57660 AT1G57860 XW6 ATH7 ARR3 TIM13 ARP2 AtLPLAT2 AT1G63660 IMP4 AT1G64600 AT1G64880 AT1G66620 AT1G67430 PAN ATELF5A-3 AT1G69990 AT1G70600 ATWHY2 AT1G71850 AT1G71870 AP40 AT1G73940 ENO1 AT1G74050 AT1G74060 AT1G74490 NRP1 CYCB2;4 AT1G76470 AHL29 ATPDI6 LYM3 AT1G77670 AT1G77750 GNR1 ATGSTU20 AT1G79150 GAPCP-1 PPR596 AT1G80750 AT2G01250 AtPP2-B6 AtSOT1 AT2G05220 AT2G09990 AT2G15000 UGT73B4 AT2G17360 EMB2296 ATPRMT1A AT2G19730 AT2G19740 AT2G19750 AT2G20060 AT2G20420 AT2G20450 EDA27 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. AT2G21580 AT2G22230 MEL4 ATMES1 AT2G25210 NPC2 NF-YB11 PGY1 AT2G27710 HDA13 ATSMO2 TIM10 ATRPAC14 ATPCNA2 ASP1 AT2G31610 EMA1 AT2G31790 AT2G32220 HSP60-2 WDR55 AT2G34480 RPS14 AT2G35040 AT2G35790 AT2G36160 AT2G36170 APG10 RPL24A AT2G37020 AT2G37190 ATRPS5B AT2G37600 AT2G37990 AT2G38160 HTA8 WTF9 AT2G39390 ATMTP11 ATRPL23A AT2G39795 AteIF3f AT2G40010 AT2G40510 AT2G40590 AT2G40660 BHLH100 AT2G41380 AT2G41730 AT2G41840 PYM AT2G42710 AT2G42720 RPL16A AT2G44040 AT2G44120 AT2G44860 cycp3;1 ATSPX3 AT2G45710 AtSLD2 AT2G46850 IAA20 AT2G47610 AtENODL16 AT3G01410 AT3G01790 AT3G02080 AT3G02560 AT3G02650 AT3G02790 AT3G03130 AT3G03920 AT3G03960 AT3G04230 RPSAb AT3G04840 AT3G04920 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G05560 AT3G06320 AT3G06680 NSN1 AT3G07110 AT3G07720 AT3G07750 AtHsp90-6 AT3G08030 AT3G09200 AT3G09630 AT3G09680 AT3G09700 ADK1 AHB2 AT3G10530 AT3G10610 ATMES17 AT3G11250 AT3G11510 CYC2 AT3G11830 AML1 ATPRMT3 AT3G12340 AtMYB10 AT3G13160 AT3G13230 AT3G13580 HSP60-3A AT3G13882 AT3G13940 AT3G14190 AT3G14390 AT3G14600 RIP1 mMDH2 AT3G15140 ANAC054 AT3G15460 AT3G16080 AT3G16780 RFC3 RPL3P RACK1C AT3G18600 ATPUB29 RLK902 AT3G18760 AT3G19440 AT3G19500 BCAT4 TOM40 PLT1 ATPURC AT3G21330 AT3G22230 RPS10 AT3G22660 AT3G23390 AT3G23620 AtGRP4 AT3G23930 AT3G23940 HSP60 AT3G24830 ATL5 EDF3 AOC3 CYP71B15 ATPHB4 CARA AT3G28900 ATBZIP42 AT3G44240 AT3G44590 ATHD2A AT3G45030 AT3G45710 ATPHS2 AT3G47370 BIR6 AtMYB45 EMB1080 ATBBC1 AT3G49080 DMS3 ATBCAT-3 AT3G49810 AT3G49910 MYB77 AT3G50230 BEH1 AT3G50800 GATA18 AT3G51280 ATEBP1 AT3G52440 AT3G52580 EMB2167 RPL24 AT3G53430 AT3G53740 AT3G53870 AT3G53890 ATPUMP1 TBL36 ASML1 AT3G54400 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis HTA11 ATCDT1B ATPDI1 ATPURM AT3G55170 RPL23A2 AT3G55605 AT3G55750 ROC2 ATFER3 IMK3 AT3G56340 BHLH038 AT3G57000 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G58690 AT3G58700 AT3G59670 AT3G59890 AT3G60660 AT3G60770 AT3G61610 ATGSTF13 AT3G62870 OTP86 GAE3 EMB3127 AtMYB55 RGXT2 AT4G02230 AT4G02800 AT4G02930 APR DES-1-LIKE AT4G04940 AT4G05400 ATNDK1 ATCPK4 AT4G10450 AT4G11120 AT4G12130 AT4G12600 AT4G13170 AT4G13210 ATLEUC1 CYP83A1 ATGRP2 AT4G14320 AT4G15000 CYP702A2 AT4G15640 AT4G16720 ATHB-2 AT4G17390 HAT1 AT4G18100 AT4G18440 SNI1 RPL16B MORF1 APR3 AT4G23620 AT4G24830 ATPAP24 ATFKBP53 ATFIB2 AT4G25730 AT4G25740 ATXTH14 AT4G25890 ATNAP1;1 ACS7 AT4G26230 AT4G26600 AR192 RRP41L AT4G28360 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase ATXTH26 AT4G29410 rps15ae ATPRMT11 MTO2 AT4G30180 RUXF MERI-5 AT4G30800 AT4G30840 NFD1 RPS6 AT4G31810 AtENODL15 AtLa1 AT4G33420 RSL2 AT4G34555 AT4G34670 AT4G35850 AT4G36130 CYP84A1 AT4G36580 BEH2 AT4G37660 mtHsc70-1 ATBRI1 ATIPS1 AT5G01910 AT5G02050 AT5G02610 GSTL1 AT5G02870 GYRB2 SIR AT5G04800 ATNAS1 AT5G06360 AT5G07090 AT5G08180 AT5G08400 LAC14 AT5G09500 AT5G09510 AtPPa6 EMB3010 AIL6 AT5G11240 AT5G11750 ATWRKY75 AT5G13140 AK TRA2 AAC2 AT5G13520 AT5G13830 ATIMD1 AT5G14580 AT5G14600 ATVDAC3 AT5G15200 AT5G15520 ATRGP2 PSRP3/2 AtbZIP3 AT5G16070 AT5G16130 TOZ MEX1 AtMYB56 WOX12 AT5G18380 similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase ATSPX1 AT5G20160 ATCPN21 AT5G22100 AT5G22440 ATHD2 PYRD AT5G23535 RPS11-BETA AT5G23900 AT5G24840 AT5G25580 LON1 AT5G27330 AT5G27770 AT5G27850 AT5G28060 ATWRKY74 AT5G35530 BGLU42 AT5G38200 OLI7 anac094 AT5G39850 AT5G40040 GPDHp ATPHB3 POLA3 AT5G42150 ATS AT5G42700 NF-YC13 AT5G45590 AT5G45775 AT5G46430 AT5G47210 AT5G47700 AT5G47930 GFA2 AT5G48360 AT5G48760 TIM8 AT5G51310 At-RS41 HDG7 ATFBR1 AT5G52650 AT5G53070 AT5G53920 PTAC15 ATRBP45A OLI2 ANQ1 AT5G56710 AT5G56940 RID2 AT5G57290 AT5G57480 RPB5C AT5G58420 BSK5 AT5G59070 AT5G59240 AT5G59850 AT5G60670 AT5G60710 COBL5 GR-RBP3 PDCB1 AT5G61170 AT5G61880 AT5G62210 AT5G62290 AT5G62300 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. RPS28 AT5G64650 AT5G64670 AT5G64680 ASN2 AT5G65300 AT5G65920 AT5G66060 AT5G66080 AT5G66860 AT5G67200 AT5G67510
GO:0044260 cellular macromolecule metabolic process	BP	4.309e-37	emb2386 AtTRM82 AT1G03830 ATPHB2 RPS15 PDLP2 AT1G04590 LIP2 ATPRMT10 AT1G05440 AT1G06790 AT1G07070 AT1G07210 ATPCNA1 AT1G07930 AT1G08360 AT1G08845 AT1G09590 AT1G09690 DRB1 AT1G09800 AT1G10780 GAPC-2 AT1G14060 DECOY ATXTH28 CPN10 AT1G15250 AT1G15480 AtTLP8 HLL AT1G18540 AT1G18850 AT1G20370 AT1G21340 PFL AT1G23100 AT1G23280 RPL27A AT1G23410 AT1G25260 AT1G26470 AT1G26740 ANAC009 AT1G26880 RPL10B AT1G27400 NFD3 AT1G32190 AT1G33120 AT1G34030 AT1G41880 ARP1 RACK1B AT1G48830 ATNUC-L1 AT1G50400 UBC20 PLT2 AT1G52930 G-H2AX NOP56 ATMYB72 AT1G56680 AT1G57660 AT1G57860 XW6 ATH7 ARR3 TIM13 ARP2 AT1G63660 IMP4 AT1G64600 AT1G64880 AT1G66620 AT1G67430 PAN ATELF5A-3 AT1G69990 AT1G70600 ATWHY2 AP40 AT1G73940 AT1G74050 AT1G74060 AT1G74490 CYCB2;4 AHL29 ATPDI6 LYM3 AT1G77750 ATGSTU20 AT1G80750 AT2G01250 AtPP2-B6 AT2G05220 AT2G09990 AT2G17360 EMB2296 ATPRMT1A AT2G19730 AT2G19740 AT2G19750 AT2G20060 AT2G20420 AT2G20450 EDA27 AT2G21580 AT2G22230 MEL4 AT2G25210 NF-YB11 PGY1 AT2G27710 HDA13 TIM10 ATRPAC14 ATPCNA2 AT2G31610 AT2G32220 HSP60-2 AT2G34480 RPS14 AT2G35790 AT2G36160 AT2G36170 RPL24A AT2G37190 ATRPS5B AT2G37600 AT2G37990 AT2G38160 HTA8 WTF9 AT2G39390 ATRPL23A AT2G39795 AteIF3f AT2G40010 AT2G40510 AT2G40590 AT2G40660 BHLH100 AT2G41840 PYM AT2G42710 AT2G42720 RPL16A AT2G44120 AT2G44860 cycp3;1 ATSPX3 AT2G45710 AT2G46850 IAA20 AT2G47610 AtENODL16 AT3G01410 AT3G01790 AT3G02080 AT3G02560 AT3G02650 AT3G02790 AT3G03130 AT3G03920 AT3G03960 AT3G04230 RPSAb AT3G04840 AT3G04920 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G05560 AT3G06320 AT3G06680 NSN1 AT3G07110 AT3G07750 AtHsp90-6 AT3G09200 AT3G09630 AT3G09680 AT3G09700 AT3G10610 AT3G11250 AT3G11510 CYC2 AT3G11830 AML1 ATPRMT3 AT3G12340 AtMYB10 AT3G13160 AT3G13230 AT3G13580 HSP60-3A AT3G13882 AT3G13940 AT3G14190 AT3G14600 RIP1 ANAC054 AT3G15460 AT3G16080 AT3G16780 RFC3 RPL3P RACK1C AT3G18600 ATPUB29 RLK902 AT3G18760 AT3G19440 AT3G19500 TOM40 PLT1 AT3G21330 AT3G22230 RPS10 AT3G22660 AT3G23390 AT3G23620 AtGRP4 AT3G23930 HSP60 AT3G24830 ATL5 EDF3 ATPHB4 CARA AT3G28900 ATBZIP42 AT3G44240 AT3G44590 ATHD2A AT3G45030 AT3G45710 ATPHS2 AT3G47370 BIR6 AtMYB45 EMB1080 ATBBC1 AT3G49080 DMS3 AT3G49810 AT3G49910 MYB77 AT3G50230 BEH1 AT3G50800 GATA18 AT3G51280 ATEBP1 AT3G52440 AT3G52580 EMB2167 RPL24 AT3G53430 AT3G53740 AT3G53870 AT3G53890 TBL36 ASML1 HTA11 ATCDT1B ATPDI1 AT3G55170 RPL23A2 AT3G55605 AT3G55750 ROC2 IMK3 AT3G56340 BHLH038 AT3G57000 AtCBF5 AT3G57490 AT3G58660 AT3G58690 AT3G58700 AT3G60660 AT3G60770 AT3G61610 AT3G62870 OTP86 AtMYB55 RGXT2 AT4G02230 AT4G02800 AT4G02930 AT4G04940 AT4G05400 ATCPK4 AT4G10450 AT4G11120 AT4G12600 AT4G13170 AT4G13210 ATLEUC1 CYP83A1 ATGRP2 AT4G14320 AT4G15000 AT4G15640 AT4G16720 ATHB-2 AT4G17390 HAT1 AT4G18100 SNI1 RPL16B MORF1 AT4G23620 ATPAP24 ATFKBP53 ATFIB2 AT4G25730 AT4G25740 ATXTH14 AT4G25890 ATNAP1;1 AT4G26230 AT4G26600 AR192 RRP41L AT4G28360 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase ATXTH26 AT4G29410 rps15ae ATPRMT11 AT4G30180 RUXF MERI-5 AT4G30800 AT4G30840 NFD1 RPS6 AT4G31810 AtLa1 RSL2 AT4G34555 AT4G34670 AT4G35850 AT4G36130 BEH2 AT4G37660 mtHsc70-1 AT5G01910 AT5G02050 AT5G02610 GSTL1 AT5G02870 GYRB2 AT5G04800 AT5G06360 AT5G07090 AT5G08180 AT5G09500 AT5G09510 EMB3010 AIL6 AT5G11240 AT5G11750 ATWRKY75 AAC2 AT5G13520 AT5G13830 AT5G14580 AT5G14600 AT5G15200 AT5G15520 ATRGP2 PSRP3/2 AtbZIP3 AT5G16070 AT5G16130 TOZ MEX1 AtMYB56 WOX12 AT5G18380 ATSPX1 AT5G20160 AT5G22100 AT5G22440 ATHD2 PYRD AT5G23535 RPS11-BETA AT5G23900 AT5G24840 AT5G25580 LON1 AT5G27770 AT5G27850 AT5G28060 ATWRKY74 AT5G35530 BGLU42 OLI7 anac094 AT5G39850 AT5G40040 ATPHB3 POLA3 ATS AT5G42700 NF-YC13 AT5G45590 AT5G45775 AT5G46430 AT5G47700 AT5G47930 GFA2 AT5G48360 AT5G48760 TIM8 At-RS41 HDG7 ATFBR1 AT5G52650 AT5G53070 AT5G53920 PTAC15 OLI2 ANQ1 AT5G56710 AT5G56940 RID2 AT5G57290 RPB5C AT5G58420 BSK5 AT5G59240 AT5G59850 AT5G60670 AT5G60710 GR-RBP3 AT5G61170 AT5G61880 AT5G62290 AT5G62300 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. RPS28 AT5G64650 AT5G64670 AT5G64680 AT5G65920 AT5G66060 AT5G66080 AT5G66860 AT5G67200 AT5G67510
GO:0009260 ribonucleotide biosynthetic process	BP	1.665e-35	NFD5 AT1G23280 NFD3 AT1G48570 RACK1B ATNUC-L1 AT1G52930 NOP56 AT1G63660 AT1G64880 AT1G71850 AT1G79150 PPR596 AT2G15000 ASP1 HSP60-2 WDR55 AT2G35040 AT2G37020 AT2G39795 AT2G40660 AT3G02650 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G09630 AT3G10530 ATPRMT3 AT3G13160 AT3G15140 AT3G15460 AT3G16780 RACK1C AT3G18600 TOM40 RPS10 AT3G23940 ATL5 CARA ATHD2A AT3G49080 ATEBP1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G57490 AT3G57940 AT3G58660 AT4G02930 AT4G04940 ATNDK1 AT4G17390 AT4G18440 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G31810 AtLa1 AT4G35850 AT4G36580 AT5G02050 AT5G02870 AT5G07090 AT5G11240 ATHD2 PYRD OLI7 AT5G47210 ATRBP45A GR-RBP3 AT5G61880 AT5G64670
GO:0046390 ribose phosphate biosynthetic process	BP	2.518e-35	NFD5 AT1G23280 NFD3 AT1G48570 RACK1B ATNUC-L1 AT1G52930 NOP56 AT1G63660 AT1G64880 AT1G71850 AT1G79150 PPR596 AT2G15000 ASP1 HSP60-2 WDR55 AT2G35040 AT2G37020 AT2G39795 AT2G40660 AT3G02650 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G09630 AT3G10530 ATPRMT3 AT3G13160 AT3G15140 AT3G15460 AT3G16780 RACK1C AT3G18600 TOM40 RPS10 AT3G23940 ATL5 CARA ATHD2A AT3G49080 ATEBP1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G57490 AT3G57940 AT3G58660 AT4G02930 AT4G04940 ATNDK1 AT4G17390 AT4G18440 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G31810 AtLa1 AT4G35850 AT4G36580 AT5G02050 AT5G02870 AT5G07090 AT5G11240 ATHD2 PYRD OLI7 AT5G47210 ATRBP45A GR-RBP3 AT5G61880 AT5G64670
GO:0019538 protein metabolic process	BP	4.157e-35	emb2386 ATPHB2 RPS15 PDLP2 LIP2 ATPRMT10 AT1G05440 AT1G07070 AT1G07210 ATPCNA1 AT1G07930 AT1G08360 AT1G08845 AT1G09590 AT1G09690 AT1G10780 GAPC-2 AT1G14060 DECOY CPN10 AT1G15250 HLL AT1G18540 ATSBT5.2 AT1G20380 PFL AT1G23100 RPL27A AT1G23410 AT1G25260 AT1G26740 AT1G26880 RPL10B AT1G27400 NFD3 AT1G32190 AT1G33120 AT1G34030 AT1G41880 ARP1 RACK1B AT1G48830 UBC20 AT1G57660 AT1G57860 XW6 ATH7 SCPL32 ARP2 AT1G64600 AT1G64880 AT1G66620 AT1G67430 ATELF5A-3 AT1G69990 AT1G70600 AP40 AT1G74050 AT1G74060 AT1G74490 CYCB2;4 AHL29 ATPDI6 AT1G77750 AT1G80750 AT2G01250 AtPP2-B6 AT2G05220 AT2G09990 AT2G17360 EMB2296 ATPRMT1A AT2G19730 AT2G19740 AT2G19750 AT2G20060 AT2G20420 AT2G20450 AT2G21580 AT2G25210 PGY1 AT2G27710 ATPCNA2 AT2G31610 AT2G32220 HSP60-2 AT2G34480 RPS14 AT2G36160 AT2G36170 RPL24A AT2G37190 ATRPS5B AT2G37600 AT2G37990 AT2G38160 HTA8 AT2G39390 ATRPL23A AT2G39795 AteIF3f AT2G40010 AT2G40510 AT2G40590 AT2G40660 AT2G41840 AT2G42710 RPL16A AT2G44120 AT2G44860 cycp3;1 AT2G45710 AT2G46850 AT2G47610 AtENODL16 AT3G01790 AT3G02080 AT3G02560 AT3G02650 AT3G03920 AT3G03960 AT3G04230 RPSAb AT3G04840 AT3G04920 AT3G05560 AT3G06320 AT3G06680 AT3G07110 AtHsp90-6 AT3G09200 AT3G09630 AT3G09680 AT3G09700 AT3G10610 AT3G11250 AT3G11510 CYC2 AT3G11830 AML1 SCPL15 ATPRMT3 AT3G12340 NANA AtMYB10 AT3G13160 AT3G13580 HSP60-3A AT3G13882 AT3G14190 AT3G14600 AT3G16080 AT3G16780 RFC3 RPL3P AT3G18600 ATPUB29 RLK902 AT3G18760 AT3G22230 RPS10 AT3G23390 AT3G23930 HSP60 AT3G24830 ATL5 AT3G28900 AT3G44590 AT3G45030 AT3G47370 EMB1080 ATBBC1 AT3G49080 DMS3 AT3G49810 AT3G49910 AT3G50230 AT3G50800 AT3G51280 ATEBP1 AT3G52580 EMB2167 RPL24 AT3G53430 AT3G53740 AT3G53870 AT3G53890 AT3G54400 ATPDI1 AT3G55170 RPL23A2 AT3G55605 AT3G55750 ROC2 IMK3 AT3G56340 AT3G57000 AT3G57490 AT3G58660 AT3G58690 AT3G58700 AT3G60770 AT3G61610 AT3G61820 AT3G62870 AT4G02230 AT4G02800 AT4G02930 AT4G05400 ATCPK4 AT4G10450 AT4G11120 AT4G13170 AT4G14320 AT4G15000 AT4G16720 AT4G17390 AT4G18100 SNI1 RPL16B AT4G23620 ATFKBP53 AT4G25740 AT4G25890 AT4G26230 AR192 RRP41L AT4G28360 AT4G29410 rps15ae ATPRMT11 AT4G29920 BRS1 AT4G30800 NFD1 RPS6 AT4G31810 AtLa1 AT4G34555 AT4G34670 AT4G35850 AT4G36130 AT4G37660 mtHsc70-1 AT5G02610 GSTL1 AT5G02870 AT5G04800 AT5G06360 AT5G07090 AT5G08180 AT5G09500 AT5G09510 EMB3010 AT5G11750 AAC2 AT5G13520 AT5G15200 AT5G15520 PSRP3/2 AT5G16070 AT5G16130 TOZ AT5G18380 AT5G22440 ATHD2 PYRD AT5G23535 RPS11-BETA AT5G23900 AT5G25580 LON1 AT5G27770 AT5G27850 AT5G28060 AT5G35530 OLI7 AT5G39850 AT5G40040 POLA3 AT5G45590 AT5G45775 AT5G46430 AT5G47700 AT5G47930 GFA2 AT5G48760 HDG7 ATFBR1 AT5G52650 AT5G53070 AT5G53920 OLI2 ANQ1 AT5G56710 AT5G56940 AT5G57290 AT5G58420 BSK5 AT5G59240 AT5G59850 AT5G60670 AT5G60710 GR-RBP3 AT5G61170 AT5G61880 AT5G62290 AT5G62300 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. RPS28 AT5G64650 AT5G64670 AT5G64680 AT5G65920 AT5G66060 AT5G66080 AT5G66860 AT5G67200 AT5G67510
GO:0071704 organic substance metabolic process	BP	2.707e-34	ATGPAT2 emb2386 AtTRM82 AT1G03830 ATPHB2 RPS15 PDLP2 AT1G04590 LIP2 ATPRMT10 AT1G05440 UGT1 UGT74E2 AT1G06120 AT1G06790 AT1G06990 AT1G07070 AT1G07210 ATPCNA1 AT1G07930 AT1G08360 ATSYP111 AT1G08845 AT1G09590 AT1G09690 DRB1 AT1G09800 AT1G10780 GAPC-2 AT1G13730 AT1G14060 AT1G14185 DECOY ATXTH28 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis CPN10 AT1G15250 AT1G15480 AtTLP8 HLL AT1G18540 AT1G18850 NFD5 ATSBT5.2 AT1G20370 AT1G20380 AT1G21340 AT1G21440 AT1G22440 PFL AT1G23100 AT1G23280 RPL27A AT1G23410 AT1G25260 AT1G26470 AT1G26740 ANAC009 AT1G26880 RPL10B ATGSTU14 AT1G27400 ATIMD3 NFD3 AT1G32190 AT1G33120 AT1G34030 AT1G41880 ARP1 AT1G48570 RACK1B AT1G48830 ATNUC-L1 AT1G50110 AT1G50400 UBC20 PLT2 AT1G52930 GRI G-H2AX NOP56 ATMYB72 AT1G56680 AT1G57660 AT1G57860 XW6 ATH7 ARR3 SCPL32 TIM13 ARP2 AtLPLAT2 AT1G63660 IMP4 AT1G64600 AT1G64880 AT1G66620 AT1G67430 PAN ATELF5A-3 AT1G69990 AT1G70600 ATWHY2 ATCEL3 AT1G71850 AT1G71870 AP40 AT1G73940 ENO1 AT1G74050 AT1G74060 AT1G74490 NRP1 CYCB2;4 AT1G76470 AHL29 ATPDI6 LYM3 AT1G77670 AT1G77750 GNR1 ATGSTU20 AT1G79150 GAPCP-1 PPR596 AT1G80750 AT2G01250 AtPP2-B6 AtSOT1 AT2G05220 AT2G05320 AT2G09990 AT2G15000 AT2G17360 EMB2296 ATPRMT1A AT2G19730 AT2G19740 AT2G19750 AT2G20060 AT2G20420 AT2G20450 EDA27 FLA6 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. AT2G21580 AT2G22230 MEL4 ATMES1 AT2G25210 NPC2 NF-YB11 PGY1 AT2G27710 HDA13 ATSMO2 TIM10 ATRPAC14 ATPCNA2 ASP1 AT2G31610 EMA1 AT2G31790 AT2G32220 HSP60-2 WDR55 AT2G34480 RPS14 AT2G35040 AT2G35790 AT2G36160 AT2G36170 APG10 RPL24A AT2G37020 AT2G37190 ATRPS5B AT2G37600 AT2G37990 AT2G38160 HTA8 WTF9 AT2G39390 ATMTP11 ATRPL23A AT2G39795 AteIF3f AT2G40010 AT2G40510 AT2G40590 AT2G40660 BHLH100 AT2G41840 PYM AT2G42710 AT2G42720 RPL16A AT2G44040 AT2G44120 AT2G44860 cycp3;1 ATSPX3 AT2G45710 AtSLD2 AT2G46850 IAA20 AT2G47610 AtENODL16 AT3G01410 AT3G01790 AT3G02080 AT3G02560 AT3G02650 AT3G02790 AT3G03130 AT3G03920 AT3G03960 AT3G04010 AT3G04230 RPSAb AT3G04840 AT3G04920 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G05560 AT3G06320 AT3G06680 NSN1 AT3G07110 AT3G07320 AT3G07720 AT3G07750 AtHsp90-6 AT3G08030 iPGAM2 AT3G09200 AT3G09630 AT3G09680 AT3G09700 ADK1 AHB2 AT3G10530 AT3G10610 ATMES17 AT3G11250 AT3G11510 CYC2 AT3G11830 AML1 SCPL15 ATPRMT3 AT3G12340 NANA AtMYB10 AT3G13160 AT3G13230 AT3G13580 HSP60-3A AT3G13882 AT3G13940 AT3G14190 AT3G14390 AT3G14600 RIP1 mMDH2 AT3G15140 ANAC054 AT3G15460 AT3G16080 AT3G16780 RFC3 RPL3P RACK1C AT3G18600 ATPUB29 RLK902 AT3G18760 AT3G19440 AT3G19500 BCAT4 TOM40 BE1 PLT1 ATPURC AT3G21330 AT3G22230 RPS10 AT3G22660 AT3G23390 AT3G23620 AtGRP4 AT3G23930 AT3G23940 HSP60 AT3G24830 ATL5 EDF3 AOC3 CYP71B15 ATPHB4 CARA AT3G27950 AT3G28900 BR6OX2 ATBZIP42 AT3G44240 AT3G44590 ATHD2A AT3G45030 AT3G45710 ATPHS2 AT3G47370 BIR6 AtMYB45 EMB1080 ATBBC1 AT3G49080 DMS3 ATBCAT-3 AT3G49810 AT3G49910 MYB77 AT3G50230 AtDWF4 BEH1 AT3G50800 GATA18 AT3G51280 ATEBP1 AT3G52440 AT3G52580 EMB2167 RPL24 AT3G53220 AT3G53430 AT3G53740 AT3G53870 AT3G53890 ATPUMP1 TBL36 ASML1 AT3G54400 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis HTA11 ATCDT1B ATPDI1 ATPURM AT3G55170 RPL23A2 AT3G55605 AT3G55750 ROC2 IMK3 AT3G56340 BHLH038 AT3G57000 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G58690 AT3G58700 AT3G59670 AT3G59890 AT3G60660 AT3G60770 AT3G61610 AT3G61820 AT3G62280 AT3G62870 OTP86 GAE3 EMB3127 AtMYB55 RGXT2 AT4G02230 AT4G02800 AT4G02930 APR DES-1-LIKE AT4G04940 AT4G05400 ATNDK1 ATCPK4 AT4G10450 AtGH9C3 AT4G11120 AT4G12130 AT4G12600 AT4G13170 AT4G13210 ATLEUC1 CYP83A1 ATGRP2 AT4G14320 AT4G15000 CYP702A2 UGT84A1 AT4G15640 AT4G16720 ATHB-2 AT4G17390 HAT1 AT4G18100 AT4G18440 SNI1 RPL16B MORF1 AT4G23620 AT4G24830 ATPAP24 ATFKBP53 ATFIB2 AT4G25730 AT4G25740 ATXTH14 AT4G25890 ATNAP1;1 ACS7 AT4G26230 AT4G26600 AR192 RRP41L AT4G28360 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase ATXTH26 AT4G29410 rps15ae ATPRMT11 MTO2 AT4G29920 AT4G30180 RUXF MERI-5 BRS1 AT4G30800 AT4G30840 NFD1 RPS6 AT4G31810 AtENODL15 AtLa1 AT4G33420 RSL2 AT4G34555 AT4G34670 AT4G35850 AT4G36130 CYP84A1 AT4G36580 BEH2 AtPLAIVA AT4G37660 mtHsc70-1 ATBRI1 ATIPS1 AT5G01910 AT5G02050 AT5G02610 GSTL1 AT5G02870 GYRB2 SIR AT5G04800 ATNAS1 AT5G06360 AT5G07090 CYP75B1 AT5G08180 LAC14 AT5G09500 AT5G09510 AtPPa6 EMB3010 AIL6 AT5G11240 AT5G11750 ATWRKY75 AT5G13140 AK TRA2 AAC2 AT5G13520 AT5G13830 ATIMD1 AT5G14580 AT5G14600 AT5G15200 AT5G15520 ATRGP2 PSRP3/2 AtbZIP3 AT5G16070 AT5G16130 TOZ MEX1 AtMYB56 WOX12 AT5G18380 similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase AT5G19730 ATSPX1 AT5G20160 ATCPN21 AT5G20950 AT5G22100 AT5G22440 ATHD2 PYRD AT5G23535 RPS11-BETA AT5G23900 AT5G24840 AT5G25580 LON1 AT5G27330 AT5G27770 AT5G27850 AT5G28060 ATWRKY74 AT5G35530 BGLU42 AT5G38200 OLI7 anac094 AT5G39850 AT5G40040 GPDHp ATPHB3 POLA3 ATS AT5G42700 NF-YC13 AT5G45590 AT5G45775 AT5G46430 AT5G47210 AT5G47700 AT5G47930 GFA2 AT5G48360 AT5G48760 TIM8 AT5G51310 AT5G51830 At-RS41 HDG7 ATFBR1 AT5G52650 AT5G53070 AT5G53920 PTAC15 ATRBP45A OLI2 ANQ1 AT5G56710 AT5G56940 RID2 AT5G57290 AT5G57785 RPB5C AT5G58420 BSK5 AT5G59070 AT5G59240 AT5G59850 AT5G60670 AT5G60710 COBL5 GR-RBP3 PDCB1 AT5G61170 AT5G61880 AT5G62210 AT5G62290 AT5G62300 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. RPS28 AT5G64650 AT5G64670 AT5G64680 ASN2 AT5G65300 AT5G65920 AT5G66060 AT5G66080 AT5G66860 AT5G67200 AT5G67510
GO:0043170 macromolecule metabolic process	BP	9.083e-34	emb2386 AtTRM82 AT1G03830 ATPHB2 RPS15 PDLP2 AT1G04590 LIP2 ATPRMT10 AT1G05440 AT1G06790 AT1G07070 AT1G07210 ATPCNA1 AT1G07930 AT1G08360 AT1G08845 AT1G09590 AT1G09690 DRB1 AT1G09800 AT1G10780 GAPC-2 AT1G14060 DECOY ATXTH28 CPN10 AT1G15250 AT1G15480 AtTLP8 HLL AT1G18540 AT1G18850 ATSBT5.2 AT1G20370 AT1G20380 AT1G21340 PFL AT1G23100 AT1G23280 RPL27A AT1G23410 AT1G25260 AT1G26470 AT1G26740 ANAC009 AT1G26880 RPL10B AT1G27400 NFD3 AT1G32190 AT1G33120 AT1G34030 AT1G41880 ARP1 RACK1B AT1G48830 ATNUC-L1 AT1G50400 UBC20 PLT2 AT1G52930 G-H2AX NOP56 ATMYB72 AT1G56680 AT1G57660 AT1G57860 XW6 ATH7 ARR3 SCPL32 TIM13 ARP2 AT1G63660 IMP4 AT1G64600 AT1G64880 AT1G66620 AT1G67430 PAN ATELF5A-3 AT1G69990 AT1G70600 ATWHY2 AP40 AT1G73940 AT1G74050 AT1G74060 AT1G74490 CYCB2;4 AHL29 ATPDI6 LYM3 AT1G77750 ATGSTU20 AT1G79150 AT1G80750 AT2G01250 AtPP2-B6 AT2G05220 AT2G09990 AT2G17360 EMB2296 ATPRMT1A AT2G19730 AT2G19740 AT2G19750 AT2G20060 AT2G20420 AT2G20450 EDA27 AT2G21580 AT2G22230 MEL4 AT2G25210 NF-YB11 PGY1 AT2G27710 HDA13 TIM10 ATRPAC14 ATPCNA2 AT2G31610 EMA1 AT2G32220 HSP60-2 AT2G34480 RPS14 AT2G35790 AT2G36160 AT2G36170 RPL24A AT2G37190 ATRPS5B AT2G37600 AT2G37990 AT2G38160 HTA8 WTF9 AT2G39390 ATRPL23A AT2G39795 AteIF3f AT2G40010 AT2G40510 AT2G40590 AT2G40660 BHLH100 AT2G41840 PYM AT2G42710 AT2G42720 RPL16A AT2G44120 AT2G44860 cycp3;1 ATSPX3 AT2G45710 AT2G46850 IAA20 AT2G47610 AtENODL16 AT3G01410 AT3G01790 AT3G02080 AT3G02560 AT3G02650 AT3G02790 AT3G03130 AT3G03920 AT3G03960 AT3G04230 RPSAb AT3G04840 AT3G04920 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G05560 AT3G06320 AT3G06680 NSN1 AT3G07110 AT3G07750 AtHsp90-6 AT3G09200 AT3G09630 AT3G09680 AT3G09700 AT3G10610 AT3G11250 AT3G11510 CYC2 AT3G11830 AML1 SCPL15 ATPRMT3 AT3G12340 NANA AtMYB10 AT3G13160 AT3G13230 AT3G13580 HSP60-3A AT3G13882 AT3G13940 AT3G14190 AT3G14600 RIP1 ANAC054 AT3G15460 AT3G16080 AT3G16780 RFC3 RPL3P RACK1C AT3G18600 ATPUB29 RLK902 AT3G18760 AT3G19440 AT3G19500 TOM40 PLT1 AT3G21330 AT3G22230 RPS10 AT3G22660 AT3G23390 AT3G23620 AtGRP4 AT3G23930 HSP60 AT3G24830 ATL5 EDF3 ATPHB4 CARA AT3G28900 ATBZIP42 AT3G44240 AT3G44590 ATHD2A AT3G45030 AT3G45710 ATPHS2 AT3G47370 BIR6 AtMYB45 EMB1080 ATBBC1 AT3G49080 DMS3 AT3G49810 AT3G49910 MYB77 AT3G50230 BEH1 AT3G50800 GATA18 AT3G51280 ATEBP1 AT3G52440 AT3G52580 EMB2167 RPL24 AT3G53430 AT3G53740 AT3G53870 AT3G53890 TBL36 ASML1 AT3G54400 HTA11 ATCDT1B ATPDI1 AT3G55170 RPL23A2 AT3G55605 AT3G55750 ROC2 IMK3 AT3G56340 BHLH038 AT3G57000 AtCBF5 AT3G57490 AT3G58660 AT3G58690 AT3G58700 AT3G60660 AT3G60770 AT3G61610 AT3G61820 AT3G62870 OTP86 AtMYB55 RGXT2 AT4G02230 AT4G02800 AT4G02930 AT4G04940 AT4G05400 ATCPK4 AT4G10450 AT4G11120 AT4G12600 AT4G13170 AT4G13210 ATLEUC1 CYP83A1 ATGRP2 AT4G14320 AT4G15000 AT4G15640 AT4G16720 ATHB-2 AT4G17390 HAT1 AT4G18100 SNI1 RPL16B MORF1 AT4G23620 ATPAP24 ATFKBP53 ATFIB2 AT4G25730 AT4G25740 ATXTH14 AT4G25890 ATNAP1;1 AT4G26230 AT4G26600 AR192 RRP41L AT4G28360 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase ATXTH26 AT4G29410 rps15ae ATPRMT11 AT4G29920 AT4G30180 RUXF MERI-5 BRS1 AT4G30800 AT4G30840 NFD1 RPS6 AT4G31810 AtLa1 RSL2 AT4G34555 AT4G34670 AT4G35850 AT4G36130 BEH2 AT4G37660 mtHsc70-1 ATBRI1 AT5G01910 AT5G02050 AT5G02610 GSTL1 AT5G02870 GYRB2 AT5G04800 AT5G06360 AT5G07090 AT5G08180 AT5G09500 AT5G09510 EMB3010 AIL6 AT5G11240 AT5G11750 ATWRKY75 AT5G13140 AAC2 AT5G13520 AT5G13830 AT5G14580 AT5G14600 AT5G15200 AT5G15520 ATRGP2 PSRP3/2 AtbZIP3 AT5G16070 AT5G16130 TOZ MEX1 AtMYB56 WOX12 AT5G18380 ATSPX1 AT5G20160 AT5G22100 AT5G22440 ATHD2 PYRD AT5G23535 RPS11-BETA AT5G23900 AT5G24840 AT5G25580 LON1 AT5G27770 AT5G27850 AT5G28060 ATWRKY74 AT5G35530 BGLU42 OLI7 anac094 AT5G39850 AT5G40040 ATPHB3 POLA3 ATS AT5G42700 NF-YC13 AT5G45590 AT5G45775 AT5G46430 AT5G47700 AT5G47930 GFA2 AT5G48360 AT5G48760 TIM8 At-RS41 HDG7 ATFBR1 AT5G52650 AT5G53070 AT5G53920 PTAC15 OLI2 ANQ1 AT5G56710 AT5G56940 RID2 AT5G57290 RPB5C AT5G58420 BSK5 AT5G59240 AT5G59850 AT5G60670 AT5G60710 GR-RBP3 AT5G61170 AT5G61880 AT5G62290 AT5G62300 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. RPS28 AT5G64650 AT5G64670 AT5G64680 AT5G65920 AT5G66060 AT5G66080 AT5G66860 AT5G67200 AT5G67510
GO:0034645 cellular macromolecule biosynthetic proc...	BP	6.927e-32	emb2386 RPS15 PDLP2 AT1G05440 AT1G06790 AT1G07070 AT1G07210 ATPCNA1 AT1G07930 AT1G08360 AT1G08845 AT1G09590 AT1G09690 AT1G10780 AT1G14060 AT1G15250 AtTLP8 HLL AT1G18540 AT1G21340 PFL RPL27A AT1G23410 AT1G25260 AT1G26470 AT1G26740 ANAC009 AT1G26880 RPL10B AT1G27400 NFD3 AT1G32190 AT1G33120 AT1G34030 AT1G41880 ARP1 RACK1B AT1G48830 UBC20 PLT2 ATMYB72 AT1G57660 AT1G57860 XW6 ATH7 ARR3 ARP2 AT1G64600 AT1G64880 AT1G67430 PAN ATELF5A-3 AT1G70600 ATWHY2 AP40 AT1G74050 AT1G74060 CYCB2;4 AT1G77750 ATGSTU20 AT1G80750 AT2G01250 AtPP2-B6 AT2G05220 AT2G09990 AT2G17360 EMB2296 AT2G19730 AT2G19740 AT2G19750 AT2G20060 AT2G20450 AT2G21580 AT2G25210 NF-YB11 PGY1 AT2G27710 ATRPAC14 ATPCNA2 AT2G31610 AT2G32220 AT2G34480 RPS14 AT2G36160 AT2G36170 RPL24A AT2G37190 ATRPS5B AT2G37600 AT2G39390 ATRPL23A AteIF3f AT2G40010 AT2G40510 AT2G40590 AT2G40660 BHLH100 AT2G41840 PYM AT2G42710 AT2G42720 RPL16A AT2G44120 AT2G44860 ATSPX3 AT2G45710 IAA20 AT2G47610 AT3G01410 AT3G01790 AT3G02080 AT3G02560 AT3G02790 AT3G03130 AT3G04230 RPSAb AT3G04840 AT3G04920 AT3G05560 AT3G06320 AT3G06680 NSN1 AT3G07110 AT3G09200 AT3G09630 AT3G09680 AT3G10610 AT3G11250 AT3G11510 CYC2 AML1 AtMYB10 AT3G13580 AT3G13882 AT3G13940 AT3G14190 AT3G14600 ANAC054 AT3G16080 AT3G16780 RFC3 RPL3P RLK902 AT3G18760 AT3G19500 PLT1 AT3G21330 AT3G22230 RPS10 AT3G23390 AT3G23930 AT3G24830 ATL5 EDF3 AT3G28900 ATBZIP42 AT3G44590 AT3G45030 AT3G45710 ATPHS2 AT3G47370 AtMYB45 EMB1080 ATBBC1 AT3G49080 DMS3 AT3G49910 MYB77 BEH1 AT3G50800 GATA18 AT3G51280 AT3G52440 AT3G52580 EMB2167 RPL24 AT3G53430 AT3G53740 AT3G53870 AT3G53890 ASML1 ATCDT1B AT3G55170 RPL23A2 AT3G55750 AT3G56340 BHLH038 AT3G57490 AT3G58660 AT3G58700 AT3G60660 AT3G60770 AT3G61610 AT3G62870 AtMYB55 RGXT2 AT4G02230 AT4G02930 AT4G05400 AT4G10450 AT4G11120 AT4G13170 ATLEUC1 CYP83A1 ATGRP2 AT4G14320 AT4G15000 AT4G16720 ATHB-2 AT4G17390 HAT1 AT4G18100 SNI1 RPL16B AT4G23620 ATPAP24 AT4G25740 AT4G25890 AT4G26230 AT4G28360 AT4G29410 rps15ae AT4G30180 AT4G30800 AT4G30840 NFD1 RPS6 RSL2 AT4G34555 AT4G34670 AT4G36130 BEH2 AT4G37660 AT5G01910 AT5G02610 AT5G02870 GYRB2 AT5G04800 AT5G06360 AT5G07090 AT5G09500 AT5G09510 EMB3010 AIL6 AT5G11750 ATWRKY75 AT5G13520 AT5G15200 AT5G15520 ATRGP2 PSRP3/2 AtbZIP3 AT5G16130 MEX1 AtMYB56 WOX12 AT5G18380 ATSPX1 AT5G22440 ATHD2 PYRD AT5G23535 RPS11-BETA AT5G23900 AT5G25580 AT5G27770 AT5G27850 AT5G28060 ATWRKY74 AT5G35530 OLI7 anac094 AT5G39850 AT5G40040 POLA3 ATS AT5G42700 NF-YC13 AT5G45590 AT5G45775 AT5G46430 AT5G47700 AT5G47930 AT5G48760 HDG7 ATFBR1 AT5G52650 AT5G53070 PTAC15 ANQ1 AT5G56710 AT5G56940 AT5G57290 RPB5C AT5G58420 BSK5 AT5G59240 AT5G59850 AT5G60670 AT5G60710 AT5G61170 AT5G62300 RPS28 AT5G64650 AT5G64670 AT5G66860 AT5G67200 AT5G67510
GO:0009059 macromolecule biosynthetic process	BP	1.036e-31	emb2386 RPS15 PDLP2 AT1G05440 AT1G06790 AT1G07070 AT1G07210 ATPCNA1 AT1G07930 AT1G08360 AT1G08845 AT1G09590 AT1G09690 AT1G10780 AT1G14060 AT1G15250 AtTLP8 HLL AT1G18540 AT1G21340 PFL RPL27A AT1G23410 AT1G25260 AT1G26470 AT1G26740 ANAC009 AT1G26880 RPL10B AT1G27400 NFD3 AT1G32190 AT1G33120 AT1G34030 AT1G41880 ARP1 RACK1B AT1G48830 UBC20 PLT2 ATMYB72 AT1G57660 AT1G57860 XW6 ATH7 ARR3 ARP2 AT1G64600 AT1G64880 AT1G67430 PAN ATELF5A-3 AT1G70600 ATWHY2 AP40 AT1G74050 AT1G74060 CYCB2;4 AT1G77750 ATGSTU20 AT1G80750 AT2G01250 AtPP2-B6 AT2G05220 AT2G09990 AT2G17360 EMB2296 AT2G19730 AT2G19740 AT2G19750 AT2G20060 AT2G20450 AT2G21580 AT2G22230 AT2G25210 NF-YB11 PGY1 AT2G27710 ATRPAC14 ATPCNA2 AT2G31610 AT2G32220 AT2G34480 RPS14 AT2G36160 AT2G36170 RPL24A AT2G37190 ATRPS5B AT2G37600 AT2G39390 ATRPL23A AteIF3f AT2G40010 AT2G40510 AT2G40590 AT2G40660 BHLH100 AT2G41840 PYM AT2G42710 AT2G42720 RPL16A AT2G44120 AT2G44860 ATSPX3 AT2G45710 IAA20 AT2G47610 AT3G01410 AT3G01790 AT3G02080 AT3G02560 AT3G02790 AT3G03130 AT3G04230 RPSAb AT3G04840 AT3G04920 AT3G05560 AT3G06320 AT3G06680 NSN1 AT3G07110 AT3G09200 AT3G09630 AT3G09680 AT3G10610 AT3G11250 AT3G11510 CYC2 AML1 AtMYB10 AT3G13580 AT3G13882 AT3G13940 AT3G14190 AT3G14600 ANAC054 AT3G16080 AT3G16780 RFC3 RPL3P RLK902 AT3G18760 AT3G19500 PLT1 AT3G21330 AT3G22230 RPS10 AT3G23390 AT3G23930 AT3G24830 ATL5 EDF3 AT3G28900 ATBZIP42 AT3G44590 AT3G45030 AT3G45710 ATPHS2 AT3G47370 AtMYB45 EMB1080 ATBBC1 AT3G49080 DMS3 AT3G49910 MYB77 BEH1 AT3G50800 GATA18 AT3G51280 AT3G52440 AT3G52580 EMB2167 RPL24 AT3G53430 AT3G53740 AT3G53870 AT3G53890 ASML1 ATCDT1B AT3G55170 RPL23A2 AT3G55750 AT3G56340 BHLH038 AT3G57490 AT3G58660 AT3G58700 AT3G60660 AT3G60770 AT3G61610 AT3G62870 AtMYB55 RGXT2 AT4G02230 AT4G02930 AT4G05400 AT4G10450 AT4G11120 AT4G13170 ATLEUC1 CYP83A1 ATGRP2 AT4G14320 AT4G15000 AT4G16720 ATHB-2 AT4G17390 HAT1 AT4G18100 SNI1 RPL16B AT4G23620 ATPAP24 AT4G25740 AT4G25890 AT4G26230 AT4G28360 AT4G29410 rps15ae AT4G30180 AT4G30800 AT4G30840 NFD1 RPS6 RSL2 AT4G34555 AT4G34670 AT4G36130 BEH2 AT4G37660 ATBRI1 AT5G01910 AT5G02610 AT5G02870 GYRB2 AT5G04800 AT5G06360 AT5G07090 AT5G09500 AT5G09510 EMB3010 AIL6 AT5G11750 ATWRKY75 AT5G13140 AT5G13520 AT5G15200 AT5G15520 ATRGP2 PSRP3/2 AtbZIP3 AT5G16130 MEX1 AtMYB56 WOX12 AT5G18380 ATSPX1 AT5G22440 ATHD2 PYRD AT5G23535 RPS11-BETA AT5G23900 AT5G25580 AT5G27770 AT5G27850 AT5G28060 ATWRKY74 AT5G35530 OLI7 anac094 AT5G39850 AT5G40040 POLA3 ATS AT5G42700 NF-YC13 AT5G45590 AT5G45775 AT5G46430 AT5G47700 AT5G47930 AT5G48760 HDG7 ATFBR1 AT5G52650 AT5G53070 PTAC15 ANQ1 AT5G56710 AT5G56940 AT5G57290 RPB5C AT5G58420 BSK5 AT5G59240 AT5G59850 AT5G60670 AT5G60710 AT5G61170 AT5G62300 RPS28 AT5G64650 AT5G64670 AT5G66860 AT5G67200 AT5G67510
GO:0044238 primary metabolic process	BP	2.604e-31	ATGPAT2 emb2386 AtTRM82 AT1G03830 ATPHB2 RPS15 PDLP2 AT1G04590 LIP2 ATPRMT10 AT1G05440 UGT1 AT1G06120 AT1G06790 AT1G06990 AT1G07070 AT1G07210 ATPCNA1 AT1G07930 AT1G08360 ATSYP111 AT1G08845 AT1G09590 AT1G09690 DRB1 AT1G09800 AT1G10780 GAPC-2 AT1G13730 AT1G14060 DECOY ATXTH28 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis CPN10 AT1G15250 AT1G15480 AtTLP8 HLL AT1G18540 AT1G18850 NFD5 ATSBT5.2 AT1G20370 AT1G20380 AT1G21340 AT1G22440 PFL AT1G23100 AT1G23280 RPL27A AT1G23410 AT1G25260 AT1G26470 AT1G26740 ANAC009 AT1G26880 RPL10B AT1G27400 ATIMD3 NFD3 AT1G32190 AT1G33120 AT1G34030 AT1G41880 ARP1 AT1G48570 RACK1B AT1G48830 ATNUC-L1 AT1G50110 AT1G50400 UBC20 PLT2 AT1G52930 GRI G-H2AX NOP56 ATMYB72 AT1G56680 AT1G57660 AT1G57860 XW6 ATH7 ARR3 SCPL32 TIM13 ARP2 AtLPLAT2 AT1G63660 IMP4 AT1G64600 AT1G64880 AT1G66620 AT1G67430 PAN ATELF5A-3 AT1G69990 AT1G70600 ATWHY2 ATCEL3 AT1G71850 AT1G71870 AP40 AT1G73940 ENO1 AT1G74050 AT1G74060 AT1G74490 NRP1 CYCB2;4 AHL29 ATPDI6 AT1G77670 AT1G77750 ATGSTU20 AT1G79150 GAPCP-1 PPR596 AT1G80750 AT2G01250 AtPP2-B6 AtSOT1 AT2G05220 AT2G05320 AT2G09990 AT2G15000 AT2G17360 EMB2296 ATPRMT1A AT2G19730 AT2G19740 AT2G19750 AT2G20060 AT2G20420 AT2G20450 EDA27 FLA6 AT2G21580 AT2G22230 AT2G25210 NPC2 NF-YB11 PGY1 AT2G27710 HDA13 ATSMO2 TIM10 ATRPAC14 ATPCNA2 ASP1 AT2G31610 EMA1 AT2G32220 HSP60-2 WDR55 AT2G34480 RPS14 AT2G35040 AT2G35790 AT2G36160 AT2G36170 APG10 RPL24A AT2G37020 AT2G37190 ATRPS5B AT2G37600 AT2G37990 AT2G38160 HTA8 WTF9 AT2G39390 ATRPL23A AT2G39795 AteIF3f AT2G40010 AT2G40510 AT2G40590 AT2G40660 BHLH100 AT2G41840 PYM AT2G42710 AT2G42720 RPL16A AT2G44040 AT2G44120 AT2G44860 cycp3;1 ATSPX3 AT2G45710 AtSLD2 AT2G46850 IAA20 AT2G47610 AtENODL16 AT3G01410 AT3G01790 AT3G02080 AT3G02560 AT3G02650 AT3G02790 AT3G03130 AT3G03920 AT3G03960 AT3G04010 AT3G04230 RPSAb AT3G04840 AT3G04920 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G05560 AT3G06320 AT3G06680 NSN1 AT3G07110 AT3G07320 AT3G07750 AtHsp90-6 iPGAM2 AT3G09200 AT3G09630 AT3G09680 AT3G09700 ADK1 AHB2 AT3G10530 AT3G10610 AT3G11250 AT3G11510 CYC2 AT3G11830 AML1 SCPL15 ATPRMT3 AT3G12340 NANA AtMYB10 AT3G13160 AT3G13230 AT3G13580 HSP60-3A AT3G13882 AT3G13940 AT3G14190 AT3G14390 AT3G14600 RIP1 mMDH2 AT3G15140 ANAC054 AT3G15460 AT3G16080 AT3G16780 RFC3 RPL3P RACK1C AT3G18600 ATPUB29 RLK902 AT3G18760 AT3G19440 AT3G19500 BCAT4 TOM40 BE1 PLT1 ATPURC AT3G21330 AT3G22230 RPS10 AT3G22660 AT3G23390 AT3G23620 AtGRP4 AT3G23930 AT3G23940 HSP60 AT3G24830 ATL5 EDF3 ATPHB4 CARA AT3G27950 AT3G28900 BR6OX2 ATBZIP42 AT3G44240 AT3G44590 ATHD2A AT3G45030 AT3G45710 ATPHS2 AT3G47370 BIR6 AtMYB45 EMB1080 ATBBC1 AT3G49080 DMS3 ATBCAT-3 AT3G49810 AT3G49910 MYB77 AT3G50230 AtDWF4 BEH1 AT3G50800 GATA18 AT3G51280 ATEBP1 AT3G52440 AT3G52580 EMB2167 RPL24 AT3G53430 AT3G53740 AT3G53870 AT3G53890 ATPUMP1 ASML1 AT3G54400 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis HTA11 ATCDT1B ATPDI1 ATPURM AT3G55170 RPL23A2 AT3G55605 AT3G55750 ROC2 IMK3 AT3G56340 BHLH038 AT3G57000 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G58690 AT3G58700 AT3G59670 AT3G59890 AT3G60660 AT3G60770 AT3G61610 AT3G61820 AT3G62280 AT3G62870 OTP86 GAE3 EMB3127 AtMYB55 RGXT2 AT4G02230 AT4G02800 AT4G02930 APR DES-1-LIKE AT4G04940 AT4G05400 ATNDK1 ATCPK4 AT4G10450 AtGH9C3 AT4G11120 AT4G12600 AT4G13170 ATLEUC1 CYP83A1 ATGRP2 AT4G14320 AT4G15000 CYP702A2 AT4G15640 AT4G16720 ATHB-2 AT4G17390 HAT1 AT4G18100 AT4G18440 SNI1 RPL16B MORF1 AT4G23620 AT4G24830 ATPAP24 ATFKBP53 ATFIB2 AT4G25730 AT4G25740 ATXTH14 AT4G25890 ATNAP1;1 ACS7 AT4G26230 AT4G26600 AR192 RRP41L AT4G28360 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase ATXTH26 AT4G29410 rps15ae ATPRMT11 MTO2 AT4G29920 AT4G30180 RUXF MERI-5 BRS1 AT4G30800 AT4G30840 NFD1 RPS6 AT4G31810 AtLa1 RSL2 AT4G34555 AT4G34670 AT4G35850 AT4G36130 AT4G36580 BEH2 AtPLAIVA AT4G37660 mtHsc70-1 ATBRI1 ATIPS1 AT5G01910 AT5G02050 AT5G02610 GSTL1 AT5G02870 GYRB2 SIR AT5G04800 AT5G06360 AT5G07090 AT5G08180 AT5G09500 AT5G09510 AtPPa6 EMB3010 AIL6 AT5G11240 AT5G11750 ATWRKY75 AT5G13140 AK TRA2 AAC2 AT5G13520 AT5G13830 ATIMD1 AT5G14580 AT5G14600 AT5G15200 AT5G15520 ATRGP2 PSRP3/2 AtbZIP3 AT5G16070 AT5G16130 TOZ MEX1 AtMYB56 WOX12 AT5G18380 similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase ATSPX1 AT5G20160 ATCPN21 AT5G20950 AT5G22100 AT5G22440 ATHD2 PYRD AT5G23535 RPS11-BETA AT5G23900 AT5G24840 AT5G25580 LON1 AT5G27330 AT5G27770 AT5G27850 AT5G28060 ATWRKY74 AT5G35530 BGLU42 AT5G38200 OLI7 anac094 AT5G39850 AT5G40040 ATPHB3 POLA3 ATS AT5G42700 NF-YC13 AT5G45590 AT5G45775 AT5G46430 AT5G47210 AT5G47700 AT5G47930 GFA2 AT5G48360 AT5G48760 TIM8 AT5G51310 AT5G51830 At-RS41 HDG7 ATFBR1 AT5G52650 AT5G53070 AT5G53920 PTAC15 ATRBP45A OLI2 ANQ1 AT5G56710 AT5G56940 RID2 AT5G57290 RPB5C AT5G58420 BSK5 AT5G59070 AT5G59240 AT5G59850 AT5G60670 AT5G60710 GR-RBP3 PDCB1 AT5G61170 AT5G61880 AT5G62290 AT5G62300 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. RPS28 AT5G64650 AT5G64670 AT5G64680 ASN2 AT5G65920 AT5G66060 AT5G66080 AT5G66860 AT5G67200 AT5G67510
GO:0009259 ribonucleotide metabolic process	BP	5.995e-30	NFD5 AT1G23280 NFD3 AT1G48570 RACK1B ATNUC-L1 AT1G52930 NOP56 AT1G63660 AT1G64880 AT1G71850 AT1G79150 PPR596 AT2G15000 ASP1 HSP60-2 WDR55 AT2G35040 AT2G37020 AT2G39795 AT2G40660 AT3G02650 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G09630 AT3G10530 ATPRMT3 AT3G13160 AT3G15140 AT3G15460 AT3G16780 RACK1C AT3G18600 TOM40 RPS10 AT3G23940 ATL5 CARA ATHD2A AT3G49080 ATEBP1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G57490 AT3G57940 AT3G58660 AT4G02930 AT4G04940 ATNDK1 AT4G17390 AT4G18440 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G31810 AtLa1 AT4G35850 AT4G36580 AT5G02050 AT5G02870 AT5G07090 AT5G11240 ATHD2 PYRD OLI7 AT5G47210 ATRBP45A GR-RBP3 AT5G61880 AT5G64670
GO:0008152 metabolic process	BP	4.263e-29	ATFRO2 ATGPAT2 emb2386 AtTRM82 AT1G03830 ATPHB2 RPS15 PDLP2 AT1G04590 LIP2 ATPRMT10 AT1G05440 UGT1 UGT74E2 AT1G06120 AT1G06790 AT1G06990 AT1G07070 AT1G07210 ATPCNA1 AT1G07930 AT1G08360 ATSYP111 AT1G08845 AT1G09590 AT1G09690 DRB1 AT1G09800 AT1G10780 GAPC-2 AT1G13730 AT1G14060 AT1G14185 DECOY ATXTH28 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis CPN10 AT1G15250 AT1G15480 AtTLP8 HLL AT1G18540 AT1G18850 NFD5 ATSBT5.2 AT1G20370 AT1G20380 AT1G21340 AT1G21440 AT1G22440 PFL AT1G23100 AT1G23280 RPL27A AT1G23410 AT1G25260 AT1G26470 AT1G26740 ANAC009 AT1G26880 RPL10B ATGSTU14 AT1G27400 ATIMD3 NFD3 AT1G32190 AT1G33120 AT1G34030 AT1G34510 AT1G35610 AT1G41880 ARP1 AT1G48570 RACK1B AT1G48830 ATNUC-L1 AT1G50110 AT1G50400 UBC20 PLT2 AT1G52930 GRI G-H2AX NOP56 ATMYB72 AT1G56680 AT1G57660 AT1G57860 XW6 ATH7 ARR3 SCPL32 TIM13 ARP2 AtLPLAT2 AT1G63660 IMP4 AT1G64600 AT1G64880 CYP89A7 CYP89A5 AT1G66620 AT1G67430 PAN ATELF5A-3 AT1G69990 AT1G70600 ATWHY2 ATCEL3 AT1G71850 AT1G71870 AP40 AT1G73940 ENO1 AT1G74050 AT1G74060 AT1G74490 NRP1 CYCB2;4 AT1G76470 AHL29 ATPDI6 LYM3 AT1G77670 AT1G77750 GNR1 ATGSTU20 AT1G79150 GAPCP-1 PPR596 AT1G80750 AT2G01250 AtPP2-B6 AtSOT1 AT2G05220 AT2G05320 AT2G09990 AT2G15000 UGT73B4 AT2G17360 EMB2296 ATPRMT1A AT2G19730 AT2G19740 AT2G19750 AT2G20060 AT2G20420 AT2G20450 EDA27 FLA6 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. AT2G21580 AT2G22230 MEL4 ATMES1 AT2G25210 NPC2 NF-YB11 PGY1 AT2G27710 HDA13 ATSMO2 TIM10 ATRPAC14 ATPCNA2 ASP1 AT2G31610 EMA1 AT2G31790 AT2G32220 HSP60-2 WDR55 AT2G34480 RPS14 AT2G35040 AT2G35790 AT2G36160 AT2G36170 APG10 RPL24A AT2G37020 AT2G37190 ATRPS5B AT2G37600 AT2G37990 AT2G38160 HTA8 AT2G39040 WTF9 AT2G39390 ATMTP11 ATRPL23A AT2G39795 AteIF3f AT2G40010 AT2G40510 AT2G40590 AT2G40660 BHLH100 AT2G41380 AT2G41730 AT2G41840 PYM AT2G42710 AT2G42720 RPL16A AT2G44040 AT2G44120 AT2G44860 cycp3;1 ATSPX3 AT2G45710 AtSLD2 AT2G46850 IAA20 AT2G47610 AtENODL16 AT3G01410 AT3G01790 AT3G02080 AT3G02560 AT3G02650 AT3G02790 AT3G03130 AT3G03920 AT3G03960 AT3G04010 AT3G04230 RPSAb AT3G04840 AT3G04920 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G05560 AT3G06320 AT3G06680 NSN1 AT3G07110 AT3G07320 AT3G07720 AT3G07750 AtHsp90-6 AT3G08030 iPGAM2 AT3G09200 AT3G09630 AT3G09680 AT3G09700 ADK1 AHB2 AT3G10530 AT3G10610 ATMES17 AT3G11250 AT3G11510 CYC2 AT3G11830 AML1 SCPL15 ATPRMT3 AT3G12340 NANA AtMYB10 AT3G12900 AT3G13160 AT3G13230 AT3G13580 HSP60-3A AT3G13882 AT3G13940 AT3G14190 AT3G14390 AT3G14600 RIP1 mMDH2 AT3G15140 ANAC054 AT3G15460 AT3G16080 AT3G16780 RFC3 RPL3P RACK1C AT3G18600 ATPUB29 RLK902 AT3G18760 AT3G19440 AT3G19500 BCAT4 TOM40 CYP705A23 BE1 PLT1 ATPURC AT3G21330 AT3G22230 RPS10 AT3G22660 AT3G23390 AT3G23620 AtGRP4 AT3G23930 AT3G23940 HSP60 AT3G24830 ATL5 EDF3 AOC3 CYP71B15 ATPHB4 CARA AT3G27950 AT3G28900 AtSDR4 BR6OX2 ATBZIP42 AT3G44240 AT3G44590 ATHD2A AT3G45030 AT3G45710 AT3G46280 ATPHS2 AT3G47370 BIR6 AtMYB45 EMB1080 ATBBC1 AT3G49080 DMS3 AT3G49630 ATBCAT-3 AT3G49810 AT3G49910 AT3G49960 MYB77 AT3G50230 AtDWF4 BEH1 AT3G50800 GATA18 AT3G51280 AtSDR2 ATEBP1 AT3G52440 AT3G52580 EMB2167 RPL24 AT3G53220 AT3G53430 AT3G53740 AT3G53870 AT3G53890 ATPUMP1 TBL36 ASML1 AT3G54400 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis HTA11 ATCDT1B ATPDI1 ATPURM AT3G55170 RPL23A2 AT3G55605 AT3G55750 ROC2 ATFER3 IMK3 AT3G56340 BHLH038 AT3G57000 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G58690 AT3G58700 ATMTP3 AT3G59670 AT3G59890 AT3G60660 AT3G60770 AT3G61610 AT3G61820 CYP78A9 AT3G62280 ATGSTF13 AT3G62870 OTP86 GAE3 EMB3127 AtMYB55 RGXT2 AT4G02230 AT4G02800 AT4G02930 APR DES-1-LIKE AT4G04940 AT4G05400 ATNDK1 ATCPK4 AT4G10450 AtGH9C3 AT4G11120 AT4G12130 AT4G12600 AT4G13170 AT4G13210 ATLEUC1 CYP83A1 ATGRP2 AT4G14320 AT4G15000 CYP702A2 CYP705A2 CYP705A3 UGT84A1 AT4G15640 AT4G16720 ATHB-2 AT4G17390 HAT1 AT4G18100 AT4G18440 SNI1 RPL16B MORF1 APR3 AT4G23620 AT4G24830 ATPAP24 ATFKBP53 ATFIB2 AT4G25730 AT4G25740 ATXTH14 AT4G25890 ATNAP1;1 ACS7 AT4G26230 AT4G26600 AR192 RRP41L AT4G28360 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase ATXTH26 AT4G29410 rps15ae ATPRMT11 MTO2 AT4G29920 AT4G30180 RUXF MERI-5 BRS1 AT4G30800 AT4G30840 NFD1 RPS6 AT4G31810 AtENODL15 CYP82C4 AtLa1 AT4G33420 RSL2 AT4G34360 AT4G34555 AT4G34670 AT4G35850 AT4G36130 CYP84A1 AT4G36580 BEH2 AtPLAIVA AT4G37660 mtHsc70-1 ATBRI1 ATIPS1 AT5G01910 AT5G02050 AT5G02610 GSTL1 AT5G02870 GYRB2 SIR AT5G04800 ATNAS1 AT5G05880 AT5G06360 AT5G07090 CYP75B1 AT5G08180 AT5G08400 LAC14 AT5G09500 AT5G09510 AtPPa6 EMB3010 AIL6 AT5G11240 AT5G11750 ATWRKY75 AT5G13140 AK TRA2 AAC2 AT5G13520 AT5G13830 ATIMD1 AT5G14580 AT5G14600 ATVDAC3 AT5G15200 AT5G15520 ATRGP2 PSRP3/2 AtbZIP3 AT5G16070 AT5G16130 TOZ MEX1 AtMYB56 WOX12 AT5G18380 similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase AT5G19730 ATSPX1 AT5G20160 ATCPN21 AT5G20950 AT5G22100 AT5G22440 ATHD2 PYRD AT5G23535 RPS11-BETA AT5G23900 AT5G24840 AT5G25580 LON1 AT5G27330 AT5G27770 AT5G27850 AT5G28060 ATWRKY74 AT5G35530 BGLU42 AT5G38200 OLI7 anac094 AT5G39850 AT5G40040 AT5G40590 GPDHp ATPHB3 POLA3 AT5G42150 ATS AT5G42700 NF-YC13 AT5G45590 AT5G45775 AT5G46430 AT5G47210 AT5G47700 AT5G47930 GFA2 AT5G48360 AT5G48760 TIM8 AT5G51310 AT5G51830 At-RS41 HDG7 ATFBR1 AT5G52650 AT5G53070 AT5G53920 PTAC15 ATRBP45A OLI2 ANQ1 AT5G56710 AT5G56940 RID2 AT5G57290 AT5G57480 AT5G57785 RPB5C AT5G58420 BSK5 AT5G59070 AT5G59240 AT5G59850 AT5G60670 AT5G60710 AT5G60730 COBL5 GR-RBP3 PDCB1 AT5G61170 AT5G61880 AT5G62210 AT5G62290 AT5G62300 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. RPS28 AT5G64650 AT5G64670 AT5G64680 ASN2 AT5G65300 AT5G65920 AT5G66060 AT5G66080 AT5G66860 AT5G67200 RHS19 AT5G67510
GO:0006807 nitrogen compound metabolic process	BP	2.528e-28	emb2386 AtTRM82 AT1G03830 ATPHB2 AT1G04590 LIP2 AT1G05440 UGT1 UGT74E2 AT1G06790 ATPCNA1 DRB1 AT1G09800 AT1G10780 GAPC-2 AT1G13730 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis AT1G15480 AtTLP8 HLL AT1G18540 AT1G18850 NFD5 AT1G20370 AT1G21340 AT1G23280 AT1G23410 AT1G25260 AT1G26470 ANAC009 AT1G26880 RPL10B ATGSTU14 AT1G27400 ATIMD3 NFD3 AT1G34030 ARP1 AT1G48570 RACK1B AT1G48830 ATNUC-L1 AT1G50110 AT1G50400 UBC20 PLT2 AT1G52930 G-H2AX NOP56 ATMYB72 ARR3 TIM13 ARP2 AT1G63660 IMP4 AT1G64880 AT1G67430 PAN ATWHY2 AT1G71850 AP40 AT1G73940 CYCB2;4 AT1G77670 AT1G77750 GNR1 ATGSTU20 AT1G79150 PPR596 AT1G80750 AT2G15000 AT2G17360 AT2G20060 AT2G20450 EDA27 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. AT2G21580 AT2G22230 NF-YB11 AT2G27710 HDA13 ATSMO2 TIM10 ATRPAC14 ATPCNA2 ASP1 EMA1 AT2G32220 HSP60-2 WDR55 RPS14 AT2G35040 AT2G35790 AT2G36170 APG10 RPL24A AT2G37020 AT2G37190 AT2G37990 HTA8 WTF9 ATRPL23A AT2G39795 AT2G40010 AT2G40660 BHLH100 AT2G41840 PYM AT2G42710 AT2G42720 RPL16A AT2G44040 AT2G44120 AT2G44860 ATSPX3 AT2G45710 IAA20 AT2G47610 AT3G01410 AT3G01790 AT3G02560 AT3G02650 AT3G02790 AT3G03130 AT3G03920 AT3G03960 RPSAb AT3G04840 AT3G04920 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G05560 NSN1 AT3G07110 AT3G07750 AT3G08030 AT3G09200 AT3G09630 ADK1 AT3G10530 AT3G10610 ATMES17 AT3G11510 CYC2 ATPRMT3 AT3G12340 AtMYB10 AT3G13160 AT3G13230 AT3G13940 AT3G14190 AT3G14390 RIP1 AT3G15140 ANAC054 AT3G15460 AT3G16080 AT3G16780 RACK1C AT3G18600 AT3G19440 AT3G19500 BCAT4 TOM40 PLT1 ATPURC AT3G21330 RPS10 AT3G22660 AT3G23620 AtGRP4 AT3G23940 ATL5 EDF3 CYP71B15 ATPHB4 CARA AT3G28900 ATBZIP42 AT3G44240 AT3G44590 ATHD2A AT3G47370 BIR6 AtMYB45 ATBBC1 AT3G49080 DMS3 ATBCAT-3 AT3G49910 MYB77 BEH1 GATA18 AT3G51280 ATEBP1 AT3G52440 AT3G52580 RPL24 AT3G53430 AT3G53890 ASML1 AT3G54400 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis HTA11 ATCDT1B ATPURM ROC2 AT3G56340 BHLH038 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G58700 AT3G59670 AT3G59890 AT3G60660 AT3G60770 AT3G62870 OTP86 GAE3 EMB3127 AtMYB55 AT4G02930 APR DES-1-LIKE AT4G04940 AT4G05400 ATNDK1 AT4G10450 AT4G12600 ATLEUC1 CYP83A1 ATGRP2 AT4G15000 CYP702A2 AT4G15640 AT4G16720 ATHB-2 AT4G17390 HAT1 AT4G18440 SNI1 MORF1 AT4G23620 AT4G24830 ATPAP24 ATFKBP53 ATFIB2 AT4G25730 ATNAP1;1 ACS7 AT4G26600 AR192 RRP41L This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 MTO2 AT4G30180 RUXF AT4G30800 AT4G30840 NFD1 RPS6 AT4G31810 AtLa1 AT4G33420 RSL2 AT4G34670 AT4G35850 AT4G36580 BEH2 AT4G37660 mtHsc70-1 ATIPS1 AT5G01910 AT5G02050 AT5G02870 GYRB2 SIR ATNAS1 AT5G06360 AT5G07090 AT5G08180 AT5G09510 AtPPa6 EMB3010 AIL6 AT5G11240 ATWRKY75 AT5G13140 AK AT5G13520 AT5G13830 ATIMD1 AT5G14580 AT5G14600 AT5G15200 AT5G15520 ATRGP2 AtbZIP3 AT5G16130 TOZ MEX1 AtMYB56 WOX12 similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase ATSPX1 AT5G20160 ATCPN21 AT5G22100 AT5G22440 ATHD2 PYRD AT5G24840 AT5G25580 AT5G27330 AT5G27770 AT5G28060 ATWRKY74 AT5G35530 AT5G38200 OLI7 anac094 ATPHB3 POLA3 ATS AT5G42700 NF-YC13 AT5G47210 AT5G48360 AT5G48760 TIM8 At-RS41 HDG7 ATFBR1 PTAC15 ATRBP45A OLI2 ANQ1 AT5G56940 RID2 RPB5C AT5G58420 AT5G59240 AT5G59850 AT5G60710 GR-RBP3 PDCB1 AT5G61880 AT5G62290 AT5G64650 AT5G64670 AT5G64680 ASN2 AT5G66060 AT5G67200
GO:0009117 nucleotide metabolic process	BP	2.065e-27	ATPHB2 LIP2 ATPCNA1 GAPC-2 AT1G13730 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis NFD5 AT1G23280 AT1G23410 NFD3 AT1G48570 RACK1B ATNUC-L1 AT1G52930 NOP56 ARP2 AT1G63660 AT1G64880 AT1G71850 AT1G79150 PPR596 AT2G15000 HDA13 ASP1 EMA1 HSP60-2 WDR55 AT2G35040 AT2G37020 AT2G39795 AT2G40660 AT3G02650 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G09630 AT3G10530 AT3G10610 ATPRMT3 AT3G13160 AT3G15140 AT3G15460 AT3G16780 RACK1C AT3G18600 TOM40 ATPURC RPS10 AT3G23940 ATL5 CARA ATHD2A AT3G49080 ATEBP1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G56340 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G59670 GAE3 AT4G02930 AT4G04940 ATNDK1 AT4G12600 CYP83A1 AT4G17390 AT4G18440 AT4G24830 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G31810 AtLa1 AT4G35850 AT4G36580 mtHsc70-1 AT5G02050 AT5G02870 AT5G07090 AT5G08180 AT5G11240 ATRGP2 MEX1 ATHD2 PYRD AT5G24840 AT5G27330 OLI7 AT5G47210 ATRBP45A AT5G59240 GR-RBP3 AT5G61880 AT5G64670
GO:0006753 nucleoside phosphate metabolic process	BP	3.048e-27	ATPHB2 LIP2 ATPCNA1 GAPC-2 AT1G13730 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis NFD5 AT1G23280 AT1G23410 NFD3 AT1G48570 RACK1B ATNUC-L1 AT1G52930 NOP56 ARP2 AT1G63660 AT1G64880 AT1G71850 AT1G79150 PPR596 AT2G15000 HDA13 ASP1 EMA1 HSP60-2 WDR55 AT2G35040 AT2G37020 AT2G39795 AT2G40660 AT3G02650 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G09630 AT3G10530 AT3G10610 ATPRMT3 AT3G13160 AT3G15140 AT3G15460 AT3G16780 RACK1C AT3G18600 TOM40 ATPURC RPS10 AT3G23940 ATL5 CARA ATHD2A AT3G49080 ATEBP1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G56340 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G59670 GAE3 AT4G02930 AT4G04940 ATNDK1 AT4G12600 CYP83A1 AT4G17390 AT4G18440 AT4G24830 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G31810 AtLa1 AT4G35850 AT4G36580 mtHsc70-1 AT5G02050 AT5G02870 AT5G07090 AT5G08180 AT5G11240 ATRGP2 MEX1 ATHD2 PYRD AT5G24840 AT5G27330 OLI7 AT5G47210 ATRBP45A AT5G59240 GR-RBP3 AT5G61880 AT5G64670
GO:0006725 cellular aromatic compound metabolic pro...	BP	1.113e-26	emb2386 AtTRM82 AT1G03830 ATPHB2 AT1G04590 LIP2 AT1G05440 UGT1 UGT74E2 AT1G06790 ATPCNA1 DRB1 AT1G09800 AT1G10780 GAPC-2 AT1G13730 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis AT1G15480 AtTLP8 HLL AT1G18540 AT1G18850 NFD5 AT1G20370 AT1G21340 AT1G23280 AT1G23410 AT1G25260 AT1G26470 ANAC009 AT1G26880 RPL10B AT1G27400 NFD3 AT1G34030 ARP1 AT1G48570 RACK1B AT1G48830 ATNUC-L1 AT1G50400 UBC20 PLT2 AT1G52930 GRI G-H2AX NOP56 ATMYB72 ARR3 TIM13 ARP2 AT1G63660 IMP4 AT1G64880 AT1G67430 PAN ATWHY2 AT1G71850 AP40 AT1G73940 CYCB2;4 AT1G76470 AT1G77750 ATGSTU20 AT1G79150 PPR596 AT1G80750 AtSOT1 AT2G15000 AT2G17360 AT2G20060 AT2G20450 EDA27 AT2G21580 ATMES1 NF-YB11 AT2G27710 HDA13 TIM10 ATRPAC14 ATPCNA2 ASP1 EMA1 AT2G32220 HSP60-2 WDR55 RPS14 AT2G35040 AT2G35790 AT2G36170 APG10 RPL24A AT2G37020 AT2G37190 AT2G37990 HTA8 WTF9 ATRPL23A AT2G39795 AT2G40010 AT2G40660 BHLH100 AT2G41840 PYM AT2G42710 AT2G42720 RPL16A AT2G44120 AT2G44860 ATSPX3 AT2G45710 IAA20 AT2G47610 AT3G01410 AT3G01790 AT3G02560 AT3G02650 AT3G02790 AT3G03130 AT3G03920 AT3G03960 RPSAb AT3G04840 AT3G04920 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G05560 NSN1 AT3G07110 AT3G07720 AT3G07750 AT3G08030 AT3G09200 AT3G09630 ADK1 AT3G10530 AT3G10610 ATMES17 AT3G11510 CYC2 ATPRMT3 AT3G12340 AtMYB10 AT3G13160 AT3G13230 AT3G13940 AT3G14190 RIP1 AT3G15140 ANAC054 AT3G15460 AT3G16080 AT3G16780 RACK1C AT3G18600 AT3G19440 AT3G19500 BCAT4 TOM40 PLT1 ATPURC AT3G21330 RPS10 AT3G22660 AT3G23620 AtGRP4 AT3G23940 ATL5 EDF3 CYP71B15 ATPHB4 CARA AT3G28900 ATBZIP42 AT3G44240 AT3G44590 ATHD2A AT3G47370 BIR6 AtMYB45 ATBBC1 AT3G49080 DMS3 AT3G49910 MYB77 BEH1 GATA18 AT3G51280 ATEBP1 AT3G52440 AT3G52580 RPL24 AT3G53430 AT3G53890 ASML1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis HTA11 ATCDT1B ATPURM ROC2 AT3G56340 BHLH038 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G58700 AT3G59670 AT3G60660 AT3G60770 AT3G62870 OTP86 GAE3 EMB3127 AtMYB55 AT4G02930 APR AT4G04940 AT4G05400 ATNDK1 ATCPK4 AT4G10450 AT4G12600 CYP83A1 ATGRP2 AT4G15000 CYP702A2 AT4G15640 AT4G16720 ATHB-2 AT4G17390 HAT1 AT4G18440 SNI1 MORF1 AT4G23620 AT4G24830 ATPAP24 ATFKBP53 ATFIB2 AT4G25730 ATNAP1;1 AT4G26600 AR192 RRP41L This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G30180 RUXF AT4G30800 AT4G30840 NFD1 RPS6 AT4G31810 AtLa1 AT4G33420 RSL2 AT4G34670 AT4G35850 CYP84A1 AT4G36580 BEH2 AT4G37660 mtHsc70-1 AT5G01910 AT5G02050 AT5G02870 GYRB2 SIR AT5G06360 AT5G07090 AT5G08180 LAC14 AT5G09510 AtPPa6 EMB3010 AIL6 AT5G11240 ATWRKY75 TRA2 AT5G13520 AT5G13830 AT5G14580 AT5G14600 AT5G15200 AT5G15520 ATRGP2 AtbZIP3 AT5G16130 TOZ MEX1 AtMYB56 WOX12 similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase ATSPX1 AT5G20160 AT5G22100 AT5G22440 ATHD2 PYRD AT5G24840 AT5G25580 AT5G27330 AT5G27770 AT5G28060 ATWRKY74 AT5G35530 OLI7 anac094 ATPHB3 POLA3 ATS AT5G42700 NF-YC13 AT5G47210 AT5G48360 AT5G48760 TIM8 At-RS41 HDG7 ATFBR1 PTAC15 ATRBP45A OLI2 ANQ1 AT5G56940 RID2 RPB5C AT5G58420 AT5G59240 AT5G59850 AT5G60710 COBL5 GR-RBP3 AT5G61880 AT5G62290 AT5G64650 AT5G64670 AT5G64680 AT5G67200
GO:0034641 cellular nitrogen compound metabolic pro...	BP	1.261e-26	emb2386 AtTRM82 AT1G03830 ATPHB2 AT1G04590 LIP2 AT1G05440 UGT74E2 AT1G06790 ATPCNA1 DRB1 AT1G09800 AT1G10780 GAPC-2 AT1G13730 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis AT1G15480 AtTLP8 HLL AT1G18540 AT1G18850 NFD5 AT1G20370 AT1G21340 AT1G23280 AT1G23410 AT1G25260 AT1G26470 ANAC009 AT1G26880 RPL10B ATGSTU14 AT1G27400 NFD3 AT1G34030 ARP1 AT1G48570 RACK1B AT1G48830 ATNUC-L1 AT1G50400 UBC20 PLT2 AT1G52930 G-H2AX NOP56 ATMYB72 ARR3 TIM13 ARP2 AT1G63660 IMP4 AT1G64880 AT1G67430 PAN ATWHY2 AT1G71850 AP40 AT1G73940 CYCB2;4 AT1G77670 AT1G77750 GNR1 ATGSTU20 AT1G79150 PPR596 AT1G80750 AT2G15000 AT2G17360 AT2G20060 AT2G20450 EDA27 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. AT2G21580 NF-YB11 AT2G27710 HDA13 TIM10 ATRPAC14 ATPCNA2 ASP1 EMA1 AT2G32220 HSP60-2 WDR55 RPS14 AT2G35040 AT2G35790 AT2G36170 APG10 RPL24A AT2G37020 AT2G37190 AT2G37990 HTA8 WTF9 ATRPL23A AT2G39795 AT2G40010 AT2G40660 BHLH100 AT2G41840 PYM AT2G42710 AT2G42720 RPL16A AT2G44120 AT2G44860 ATSPX3 AT2G45710 IAA20 AT2G47610 AT3G01410 AT3G01790 AT3G02560 AT3G02650 AT3G02790 AT3G03130 AT3G03920 AT3G03960 RPSAb AT3G04840 AT3G04920 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G05560 NSN1 AT3G07110 AT3G07750 AT3G08030 AT3G09200 AT3G09630 ADK1 AT3G10530 AT3G10610 ATMES17 AT3G11510 CYC2 ATPRMT3 AT3G12340 AtMYB10 AT3G13160 AT3G13230 AT3G13940 AT3G14190 RIP1 AT3G15140 ANAC054 AT3G15460 AT3G16080 AT3G16780 RACK1C AT3G18600 AT3G19440 AT3G19500 BCAT4 TOM40 PLT1 ATPURC AT3G21330 RPS10 AT3G22660 AT3G23620 AtGRP4 AT3G23940 ATL5 EDF3 CYP71B15 ATPHB4 CARA AT3G28900 ATBZIP42 AT3G44240 AT3G44590 ATHD2A AT3G47370 BIR6 AtMYB45 ATBBC1 AT3G49080 DMS3 AT3G49910 MYB77 BEH1 GATA18 AT3G51280 ATEBP1 AT3G52440 AT3G52580 RPL24 AT3G53430 AT3G53890 ASML1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis HTA11 ATCDT1B ATPURM ROC2 AT3G56340 BHLH038 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G58700 AT3G59670 AT3G60660 AT3G60770 AT3G62870 OTP86 GAE3 EMB3127 AtMYB55 AT4G02930 APR AT4G04940 AT4G05400 ATNDK1 AT4G10450 AT4G12600 CYP83A1 ATGRP2 AT4G15000 CYP702A2 AT4G15640 AT4G16720 ATHB-2 AT4G17390 HAT1 AT4G18440 SNI1 MORF1 AT4G23620 AT4G24830 ATPAP24 ATFKBP53 ATFIB2 AT4G25730 ATNAP1;1 AT4G26600 AR192 RRP41L This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G30180 RUXF AT4G30800 AT4G30840 NFD1 RPS6 AT4G31810 AtLa1 AT4G33420 RSL2 AT4G34670 AT4G35850 AT4G36580 BEH2 AT4G37660 mtHsc70-1 AT5G01910 AT5G02050 AT5G02870 GYRB2 SIR ATNAS1 AT5G06360 AT5G07090 AT5G08180 AT5G09510 AtPPa6 EMB3010 AIL6 AT5G11240 ATWRKY75 AT5G13520 AT5G13830 AT5G14580 AT5G14600 AT5G15200 AT5G15520 ATRGP2 AtbZIP3 AT5G16130 TOZ MEX1 AtMYB56 WOX12 ATSPX1 AT5G20160 AT5G22100 AT5G22440 ATHD2 PYRD AT5G24840 AT5G25580 AT5G27330 AT5G27770 AT5G28060 ATWRKY74 AT5G35530 OLI7 anac094 ATPHB3 POLA3 ATS AT5G42700 NF-YC13 AT5G47210 AT5G48360 AT5G48760 TIM8 At-RS41 HDG7 ATFBR1 PTAC15 ATRBP45A OLI2 ANQ1 AT5G56940 RID2 RPB5C AT5G58420 AT5G59240 AT5G59850 GR-RBP3 AT5G61880 AT5G62290 AT5G64650 AT5G64670 AT5G64680 ASN2 AT5G67200
GO:0046483 heterocycle metabolic process	BP	2.966e-26	emb2386 AtTRM82 AT1G03830 ATPHB2 AT1G04590 LIP2 AT1G05440 UGT74E2 AT1G06790 ATPCNA1 DRB1 AT1G09800 AT1G10780 GAPC-2 AT1G13730 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis AT1G15480 AtTLP8 HLL AT1G18540 AT1G18850 NFD5 AT1G20370 AT1G21340 AT1G23280 AT1G23410 AT1G25260 AT1G26470 ANAC009 AT1G26880 RPL10B AT1G27400 NFD3 AT1G34030 ARP1 AT1G48570 RACK1B AT1G48830 ATNUC-L1 AT1G50400 UBC20 PLT2 AT1G52930 G-H2AX NOP56 ATMYB72 ARR3 TIM13 ARP2 AT1G63660 IMP4 AT1G64880 AT1G67430 PAN ATWHY2 AT1G71850 AP40 AT1G73940 CYCB2;4 AT1G77750 ATGSTU20 AT1G79150 PPR596 AT1G80750 AT2G15000 AT2G17360 AT2G20060 AT2G20450 EDA27 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. AT2G21580 NF-YB11 AT2G27710 HDA13 TIM10 ATRPAC14 ATPCNA2 ASP1 EMA1 AT2G32220 HSP60-2 WDR55 RPS14 AT2G35040 AT2G35790 AT2G36170 APG10 RPL24A AT2G37020 AT2G37190 AT2G37990 HTA8 WTF9 ATRPL23A AT2G39795 AT2G40010 AT2G40660 BHLH100 AT2G41840 PYM AT2G42710 AT2G42720 RPL16A AT2G44120 AT2G44860 ATSPX3 AT2G45710 IAA20 AT2G47610 AT3G01410 AT3G01790 AT3G02560 AT3G02650 AT3G02790 AT3G03130 AT3G03920 AT3G03960 RPSAb AT3G04840 AT3G04920 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G05560 NSN1 AT3G07110 AT3G07750 AT3G08030 AT3G09200 AT3G09630 ADK1 AT3G10530 AT3G10610 ATMES17 AT3G11510 CYC2 ATPRMT3 AT3G12340 AtMYB10 AT3G13160 AT3G13230 AT3G13940 AT3G14190 RIP1 AT3G15140 ANAC054 AT3G15460 AT3G16080 AT3G16780 RACK1C AT3G18600 AT3G19440 AT3G19500 BCAT4 TOM40 PLT1 ATPURC AT3G21330 RPS10 AT3G22660 AT3G23620 AtGRP4 AT3G23940 ATL5 EDF3 CYP71B15 ATPHB4 CARA AT3G28900 ATBZIP42 AT3G44240 AT3G44590 ATHD2A AT3G47370 BIR6 AtMYB45 ATBBC1 AT3G49080 DMS3 AT3G49910 MYB77 BEH1 GATA18 AT3G51280 ATEBP1 AT3G52440 AT3G52580 RPL24 AT3G53430 AT3G53890 ASML1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis HTA11 ATCDT1B ATPURM ROC2 AT3G56340 BHLH038 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G58700 AT3G59670 AT3G60660 AT3G60770 AT3G62870 OTP86 GAE3 EMB3127 AtMYB55 AT4G02930 APR AT4G04940 AT4G05400 ATNDK1 AT4G10450 AT4G12600 CYP83A1 ATGRP2 AT4G15000 CYP702A2 AT4G15640 AT4G16720 ATHB-2 AT4G17390 HAT1 AT4G18440 SNI1 MORF1 AT4G23620 AT4G24830 ATPAP24 ATFKBP53 ATFIB2 AT4G25730 ATNAP1;1 AT4G26600 AR192 RRP41L This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G30180 RUXF AT4G30800 AT4G30840 NFD1 RPS6 AT4G31810 AtLa1 RSL2 AT4G34670 AT4G35850 AT4G36580 BEH2 AT4G37660 mtHsc70-1 AT5G01910 AT5G02050 AT5G02870 GYRB2 SIR ATNAS1 AT5G06360 AT5G07090 AT5G08180 AT5G09510 AtPPa6 EMB3010 AIL6 AT5G11240 ATWRKY75 AT5G13520 AT5G13830 AT5G14580 AT5G14600 AT5G15200 AT5G15520 ATRGP2 AtbZIP3 AT5G16130 TOZ MEX1 AtMYB56 WOX12 ATSPX1 AT5G20160 AT5G22100 AT5G22440 ATHD2 PYRD AT5G24840 AT5G25580 AT5G27330 AT5G27770 AT5G28060 ATWRKY74 AT5G35530 OLI7 anac094 ATPHB3 POLA3 ATS AT5G42700 NF-YC13 AT5G47210 AT5G48360 AT5G48760 TIM8 At-RS41 HDG7 ATFBR1 PTAC15 ATRBP45A OLI2 ANQ1 AT5G56940 RID2 RPB5C AT5G58420 AT5G59240 AT5G59850 AT5G60710 GR-RBP3 AT5G61880 AT5G62290 AT5G64650 AT5G64670 AT5G64680 AT5G66060 AT5G67200
GO:0055086 nucleobase-containing small molecule met...	BP	3.245e-26	AtTRM82 ATPHB2 LIP2 ATPCNA1 GAPC-2 AT1G13730 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis NFD5 AT1G23280 AT1G23410 NFD3 AT1G48570 RACK1B ATNUC-L1 AT1G52930 NOP56 ARP2 AT1G63660 AT1G64880 AT1G71850 AT1G79150 PPR596 AT2G15000 HDA13 ASP1 EMA1 HSP60-2 WDR55 AT2G35040 AT2G37020 AT2G39795 AT2G40660 AT3G02650 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G09630 ADK1 AT3G10530 AT3G10610 ATPRMT3 AT3G13160 AT3G15140 AT3G15460 AT3G16780 RACK1C AT3G18600 TOM40 ATPURC RPS10 AT3G23940 ATL5 CARA ATHD2A AT3G49080 ATEBP1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G56340 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G59670 GAE3 AT4G02930 AT4G04940 ATNDK1 AT4G12600 CYP83A1 AT4G17390 AT4G18440 AT4G24830 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G31810 AtLa1 AT4G35850 AT4G36580 mtHsc70-1 AT5G02050 AT5G02870 AT5G07090 AT5G08180 AT5G11240 ATRGP2 MEX1 ATHD2 PYRD AT5G24840 AT5G27330 OLI7 AT5G47210 ATRBP45A AT5G59240 GR-RBP3 AT5G61880 AT5G64670
GO:0006139 nucleobase-containing compound metabolic...	BP	3.257e-26	emb2386 AtTRM82 AT1G03830 ATPHB2 AT1G04590 LIP2 AT1G05440 AT1G06790 ATPCNA1 DRB1 AT1G09800 AT1G10780 GAPC-2 AT1G13730 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis AT1G15480 AtTLP8 HLL AT1G18540 AT1G18850 NFD5 AT1G20370 AT1G21340 AT1G23280 AT1G23410 AT1G25260 AT1G26470 ANAC009 AT1G26880 RPL10B AT1G27400 NFD3 AT1G34030 ARP1 AT1G48570 RACK1B AT1G48830 ATNUC-L1 AT1G50400 UBC20 PLT2 AT1G52930 G-H2AX NOP56 ATMYB72 ARR3 TIM13 ARP2 AT1G63660 IMP4 AT1G64880 AT1G67430 PAN ATWHY2 AT1G71850 AP40 AT1G73940 CYCB2;4 AT1G77750 AT1G79150 PPR596 AT1G80750 AT2G15000 AT2G17360 AT2G20060 AT2G20450 EDA27 AT2G21580 NF-YB11 AT2G27710 HDA13 TIM10 ATRPAC14 ATPCNA2 ASP1 EMA1 AT2G32220 HSP60-2 WDR55 RPS14 AT2G35040 AT2G35790 AT2G36170 RPL24A AT2G37020 AT2G37190 AT2G37990 HTA8 WTF9 ATRPL23A AT2G39795 AT2G40010 AT2G40660 BHLH100 AT2G41840 PYM AT2G42710 AT2G42720 RPL16A AT2G44120 AT2G44860 ATSPX3 AT2G45710 IAA20 AT2G47610 AT3G01410 AT3G01790 AT3G02560 AT3G02650 AT3G02790 AT3G03130 AT3G03920 AT3G03960 RPSAb AT3G04840 AT3G04920 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G05560 NSN1 AT3G07110 AT3G07750 AT3G09200 AT3G09630 ADK1 AT3G10530 AT3G10610 AT3G11510 CYC2 ATPRMT3 AT3G12340 AtMYB10 AT3G13160 AT3G13230 AT3G13940 AT3G14190 RIP1 AT3G15140 ANAC054 AT3G15460 AT3G16080 AT3G16780 RACK1C AT3G18600 AT3G19440 AT3G19500 TOM40 PLT1 ATPURC AT3G21330 RPS10 AT3G22660 AT3G23620 AtGRP4 AT3G23940 ATL5 EDF3 ATPHB4 CARA AT3G28900 ATBZIP42 AT3G44240 AT3G44590 ATHD2A AT3G47370 BIR6 AtMYB45 ATBBC1 AT3G49080 DMS3 AT3G49910 MYB77 BEH1 GATA18 AT3G51280 ATEBP1 AT3G52440 AT3G52580 RPL24 AT3G53430 AT3G53890 ASML1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis HTA11 ATCDT1B ATPURM ROC2 AT3G56340 BHLH038 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G58700 AT3G59670 AT3G60660 AT3G60770 AT3G62870 OTP86 GAE3 AtMYB55 AT4G02930 AT4G04940 AT4G05400 ATNDK1 AT4G10450 AT4G12600 CYP83A1 ATGRP2 AT4G15000 AT4G15640 AT4G16720 ATHB-2 AT4G17390 HAT1 AT4G18440 SNI1 MORF1 AT4G24830 ATPAP24 ATFKBP53 ATFIB2 AT4G25730 ATNAP1;1 AT4G26600 AR192 RRP41L This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G30180 RUXF AT4G30800 AT4G30840 NFD1 RPS6 AT4G31810 AtLa1 RSL2 AT4G34670 AT4G35850 AT4G36580 BEH2 AT4G37660 mtHsc70-1 AT5G01910 AT5G02050 AT5G02870 GYRB2 AT5G06360 AT5G07090 AT5G08180 AT5G09510 EMB3010 AIL6 AT5G11240 ATWRKY75 AT5G13520 AT5G13830 AT5G14580 AT5G14600 AT5G15200 AT5G15520 ATRGP2 AtbZIP3 AT5G16130 TOZ MEX1 AtMYB56 WOX12 ATSPX1 AT5G20160 AT5G22100 AT5G22440 ATHD2 PYRD AT5G24840 AT5G25580 AT5G27330 AT5G27770 AT5G28060 ATWRKY74 AT5G35530 OLI7 anac094 ATPHB3 POLA3 ATS AT5G42700 NF-YC13 AT5G47210 AT5G48360 AT5G48760 TIM8 At-RS41 HDG7 ATFBR1 PTAC15 ATRBP45A OLI2 ANQ1 AT5G56940 RID2 RPB5C AT5G58420 AT5G59240 AT5G59850 GR-RBP3 AT5G61880 AT5G62290 AT5G64650 AT5G64670 AT5G64680 AT5G67200
GO:1901137 carbohydrate derivative biosynthetic pro...	BP	1.357e-25	GAPC-2 NFD5 AT1G21440 AT1G23280 NFD3 AT1G48570 RACK1B ATNUC-L1 AT1G52930 NOP56 AT1G63660 AT1G64880 AT1G71850 AT1G79150 PPR596 AT2G15000 ASP1 AT2G31790 HSP60-2 WDR55 AT2G35040 AT2G37020 AT2G39795 AT2G40660 ATSPX3 AT3G02650 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G09630 ADK1 AT3G10530 ATPRMT3 AT3G13160 AT3G15140 AT3G15460 AT3G16780 RACK1C AT3G18600 BCAT4 TOM40 RPS10 AT3G23940 ATL5 CARA ATHD2A AT3G49080 ATEBP1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G57490 AT3G57940 AT3G58660 AT4G02930 APR AT4G04940 ATNDK1 ATLEUC1 CYP83A1 AT4G17390 AT4G18440 ATPAP24 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G31810 AtLa1 AT4G35850 AT4G36580 ATIPS1 AT5G02050 AT5G02870 SIR AT5G07090 AtPPa6 AT5G11240 ATWRKY75 ATIMD1 MEX1 ATSPX1 ATHD2 PYRD OLI7 GPDHp AT5G47210 ATRBP45A AT5G59070 GR-RBP3 AT5G61880 AT5G64670
GO:1901360 organic cyclic compound metabolic proces...	BP	1.919e-25	emb2386 AtTRM82 AT1G03830 ATPHB2 AT1G04590 LIP2 AT1G05440 UGT1 UGT74E2 AT1G06790 ATPCNA1 ATSYP111 DRB1 AT1G09800 AT1G10780 GAPC-2 AT1G13730 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis AT1G15480 AtTLP8 HLL AT1G18540 AT1G18850 NFD5 AT1G20370 AT1G21340 AT1G22440 AT1G23280 AT1G23410 AT1G25260 AT1G26470 ANAC009 AT1G26880 RPL10B AT1G27400 NFD3 AT1G34030 ARP1 AT1G48570 RACK1B AT1G48830 ATNUC-L1 AT1G50400 UBC20 PLT2 AT1G52930 GRI G-H2AX NOP56 ATMYB72 ARR3 TIM13 ARP2 AT1G63660 IMP4 AT1G64880 AT1G67430 PAN ATWHY2 AT1G71850 AP40 AT1G73940 CYCB2;4 AT1G76470 AT1G77750 ATGSTU20 AT1G79150 PPR596 AT1G80750 AtSOT1 AT2G15000 AT2G17360 AT2G20060 AT2G20450 EDA27 FLA6 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. AT2G21580 ATMES1 NF-YB11 AT2G27710 HDA13 ATSMO2 TIM10 ATRPAC14 ATPCNA2 ASP1 EMA1 AT2G32220 HSP60-2 WDR55 RPS14 AT2G35040 AT2G35790 AT2G36170 APG10 RPL24A AT2G37020 AT2G37190 AT2G37990 HTA8 WTF9 ATRPL23A AT2G39795 AT2G40010 AT2G40660 BHLH100 AT2G41840 PYM AT2G42710 AT2G42720 RPL16A AT2G44120 AT2G44860 ATSPX3 AT2G45710 IAA20 AT2G47610 AT3G01410 AT3G01790 AT3G02560 AT3G02650 AT3G02790 AT3G03130 AT3G03920 AT3G03960 RPSAb AT3G04840 AT3G04920 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G05560 NSN1 AT3G07110 AT3G07720 AT3G07750 AT3G08030 AT3G09200 AT3G09630 ADK1 AT3G10530 AT3G10610 ATMES17 AT3G11510 CYC2 ATPRMT3 AT3G12340 AtMYB10 AT3G13160 AT3G13230 AT3G13940 AT3G14190 RIP1 AT3G15140 ANAC054 AT3G15460 AT3G16080 AT3G16780 RACK1C AT3G18600 AT3G19440 AT3G19500 BCAT4 TOM40 PLT1 ATPURC AT3G21330 RPS10 AT3G22660 AT3G23620 AtGRP4 AT3G23940 ATL5 EDF3 CYP71B15 ATPHB4 CARA AT3G28900 BR6OX2 ATBZIP42 AT3G44240 AT3G44590 ATHD2A AT3G47370 BIR6 AtMYB45 ATBBC1 AT3G49080 DMS3 AT3G49910 MYB77 AtDWF4 BEH1 GATA18 AT3G51280 ATEBP1 AT3G52440 AT3G52580 RPL24 AT3G53430 AT3G53890 ASML1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis HTA11 ATCDT1B ATPURM ROC2 AT3G56340 BHLH038 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G58700 AT3G59670 AT3G60660 AT3G60770 AT3G62870 OTP86 GAE3 EMB3127 AtMYB55 AT4G02930 APR AT4G04940 AT4G05400 ATNDK1 ATCPK4 AT4G10450 AT4G12600 CYP83A1 ATGRP2 AT4G15000 CYP702A2 AT4G15640 AT4G16720 ATHB-2 AT4G17390 HAT1 AT4G18440 SNI1 MORF1 AT4G23620 AT4G24830 ATPAP24 ATFKBP53 ATFIB2 AT4G25730 ATNAP1;1 AT4G26600 AR192 RRP41L This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G30180 RUXF AT4G30800 AT4G30840 NFD1 RPS6 AT4G31810 AtLa1 AT4G33420 RSL2 AT4G34670 AT4G35850 CYP84A1 AT4G36580 BEH2 AT4G37660 mtHsc70-1 AT5G01910 AT5G02050 AT5G02870 GYRB2 SIR ATNAS1 AT5G06360 AT5G07090 AT5G08180 LAC14 AT5G09510 AtPPa6 EMB3010 AIL6 AT5G11240 ATWRKY75 TRA2 AT5G13520 AT5G13830 AT5G14580 AT5G14600 AT5G15200 AT5G15520 ATRGP2 AtbZIP3 AT5G16130 TOZ MEX1 AtMYB56 WOX12 similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase ATSPX1 AT5G20160 AT5G22100 AT5G22440 ATHD2 PYRD AT5G24840 AT5G25580 AT5G27330 AT5G27770 AT5G28060 ATWRKY74 AT5G35530 OLI7 anac094 ATPHB3 POLA3 ATS AT5G42700 NF-YC13 AT5G47210 AT5G48360 AT5G48760 TIM8 At-RS41 HDG7 ATFBR1 PTAC15 ATRBP45A OLI2 ANQ1 AT5G56940 RID2 RPB5C AT5G58420 AT5G59240 AT5G59850 COBL5 GR-RBP3 AT5G61880 AT5G62290 AT5G64650 AT5G64670 AT5G64680 AT5G66060 AT5G67200
GO:0090407 organophosphate biosynthetic process	BP	1.974e-25	ATGPAT2 ATPHB2 LIP2 ATPCNA1 GAPC-2 AT1G13730 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis NFD5 AT1G23280 AT1G23410 NFD3 AT1G48570 RACK1B ATNUC-L1 AT1G52930 NOP56 ARP2 AT1G63660 AT1G64880 AT1G71850 AT1G79150 PPR596 AT2G15000 NPC2 HDA13 ASP1 EMA1 HSP60-2 WDR55 AT2G35040 AT2G37020 ATMTP11 AT2G39795 AT2G40660 AT3G02650 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G09630 AT3G10530 AT3G10610 ATPRMT3 AT3G13160 AT3G15140 AT3G15460 AT3G16780 RACK1C AT3G18600 TOM40 ATPURC RPS10 AT3G23940 ATL5 CARA ATHD2A AT3G49080 ATEBP1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G56340 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G59670 AT4G02930 AT4G04940 ATNDK1 AT4G12600 CYP83A1 AT4G17390 AT4G18440 AT4G24830 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G31810 AtLa1 AT4G35850 AT4G36580 mtHsc70-1 ATIPS1 AT5G02050 AT5G02870 AT5G07090 AT5G08180 AT5G11240 MEX1 ATCPN21 ATHD2 PYRD AT5G24840 AT5G27330 OLI7 GPDHp AT5G47210 ATRBP45A AT5G59240 GR-RBP3 AT5G61880 AT5G64670
GO:0019693 ribose phosphate metabolic process	BP	6.543e-25	LIP2 GAPC-2 NFD5 AT1G23280 NFD3 AT1G48570 RACK1B ATNUC-L1 AT1G52930 NOP56 AT1G63660 AT1G64880 AT1G71850 AT1G79150 PPR596 AT2G15000 ASP1 HSP60-2 WDR55 AT2G35040 AT2G37020 AT2G39795 AT2G40660 AT3G02650 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G09630 AT3G10530 ATPRMT3 AT3G13160 AT3G15140 AT3G15460 AT3G16780 RACK1C AT3G18600 TOM40 RPS10 AT3G23940 ATL5 CARA ATHD2A AT3G49080 ATEBP1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G57490 AT3G57940 AT3G58660 AT4G02930 AT4G04940 ATNDK1 CYP83A1 AT4G17390 AT4G18440 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G31810 AtLa1 AT4G35850 AT4G36580 AT5G02050 AT5G02870 AT5G07090 AT5G11240 MEX1 ATHD2 PYRD OLI7 AT5G47210 ATRBP45A GR-RBP3 AT5G61880 AT5G64670
GO:0043412 macromolecule modification	BP	4.699e-23	emb2386 AtTRM82 PDLP2 LIP2 ATPRMT10 AT1G05440 ATPCNA1 AT1G09800 AT1G10780 AT1G14060 DECOY AT1G18540 AT1G18850 AT1G20370 AT1G23280 AT1G23410 AT1G25260 AT1G26880 RPL10B AT1G27400 AT1G32190 AT1G34030 ARP1 RACK1B ATNUC-L1 AT1G52930 G-H2AX NOP56 ATH7 TIM13 AT1G63660 IMP4 AT1G66620 AT1G67430 ATELF5A-3 AT1G69990 AP40 AT1G74490 CYCB2;4 AHL29 AT1G80750 AtPP2-B6 AT2G17360 ATPRMT1A AT2G20450 EDA27 AT2G21580 AT2G27710 HDA13 TIM10 ATPCNA2 AT2G32220 AT2G35790 AT2G36170 RPL24A AT2G37190 AT2G37990 AT2G38160 HTA8 ATRPL23A AT2G39795 AT2G40010 AT2G40660 AT2G41840 RPL16A AT2G44120 AT2G44860 cycp3;1 AT2G45710 AT2G46850 AT2G47610 AT3G02650 AT3G03920 AT3G03960 AT3G04840 AT3G04920 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G05560 NSN1 AT3G07110 AT3G07750 AT3G09200 AT3G09630 AT3G10610 AT3G11510 CYC2 ATPRMT3 AT3G12340 AtMYB10 AT3G13160 AT3G14190 AT3G14600 RIP1 AT3G15460 AT3G16080 AT3G16780 RACK1C AT3G18600 ATPUB29 AT3G19440 TOM40 AT3G22660 AT3G23620 AT3G23930 ATL5 ATPHB4 CARA AT3G28900 AT3G44240 AT3G44590 ATHD2A AT3G47370 ATBBC1 DMS3 AT3G49810 AT3G49910 AT3G50230 AT3G50800 AT3G51280 ATEBP1 AT3G52580 EMB2167 RPL24 AT3G53430 HTA11 AT3G55605 ROC2 IMK3 AT3G57000 AtCBF5 AT3G57490 AT3G58660 AT3G58690 AT3G58700 AT3G60770 AT3G61610 AT3G62870 AT4G02800 AT4G05400 ATCPK4 AT4G10450 AT4G12600 AT4G15000 AT4G15640 AT4G16720 AT4G17390 SNI1 MORF1 ATFKBP53 ATFIB2 AT4G25730 RRP41L AT4G29410 ATPRMT11 RUXF AT4G30800 NFD1 RPS6 AT4G31810 AtLa1 AT4G34670 AT4G35850 AT5G02050 GSTL1 AT5G02870 AT5G08180 AT5G09510 AT5G13520 AT5G13830 AT5G14600 AT5G15200 AT5G15520 AT5G16130 TOZ AT5G20160 AT5G22440 ATHD2 PYRD AT5G24840 AT5G25580 AT5G27770 AT5G35530 OLI7 ATPHB3 POLA3 AT5G48360 AT5G48760 TIM8 HDG7 ATFBR1 AT5G53920 ANQ1 AT5G58420 BSK5 AT5G59850 AT5G60710 GR-RBP3 AT5G61880 AT5G62290 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. AT5G64680 AT5G65920 AT5G66060 AT5G66080 AT5G67200
GO:0071840 cellular component organization or bioge...	BP	5.982e-23	emb2386 ATPHB2 LIP2 ATPRMT10 AT1G05440 UGT1 AT1G07070 ATPCNA1 HTB1 AT1G07820 AT1G08220 ATSYP111 AT1G09200 AT1G10780 GAPC-2 AT1G14060 DECOY AT1G15250 AT1G15420 AT1G15480 ATLP-1 NRP2 AT1G18850 AT1G20370 PFL AT1G23410 AT1G25260 AT1G26470 AT-EXP10 AT1G26880 AT1G27400 AT1G28190 AT1G33340 AT1G34030 AT1G41880 RACK1B AT1G48830 ATNUC-L1 AT1G50400 UBC20 AT1G52930 G-H2AX AT1G54770 ATH7 TIM13 ARP2 IMP4 AtRHD6 ATELF5A-3 AP40 AT1G73940 ENO1 NRP1 CYCB2;4 LYM3 AT1G77750 AtSOT1 AT2G05220 AT2G11910 AT2G19385 ATPRMT1A AT2G19730 AT2G19740 AT2G20420 AT2G20450 EDA27 AT2G22230 HIS4 TIM10 ATPCNA2 EMB2785 EMA1 HSP60-2 WDR55 AT2G34480 AT2G36160 APG10 RPL24A AT2G37190 AT2G37470 AT2G37990 AT2G38160 HTA8 WTF9 AT2G39390 ATRPL23A AT2G39795 AT2G40010 AT2G40510 AT2G40590 AT2G40660 PYM AT2G42720 AT2G44860 AT2G45710 AT2G47610 AT3G01410 AT3G02560 AT3G02650 AT3G03920 AT3G03960 RPSAb AT3G04920 AT3G05810 AT3G06680 AT3G07750 AT3G09200 AT3G09630 AT3G09700 AT3G10610 AT3G11250 CYC2 AT3G11830 ATPRMT3 AT3G13160 AT3G13230 AT3G14190 AT3G14600 AT3G16080 AT3G16780 RFC3 AT3G18600 TOM40 AT3G22230 AT3G22660 AtGRP4 HSP60 AT3G24830 ATL5 AOC3 CYP71B15 AT3G28900 ATHD2A AT3G45710 ATBBC1 DMS3 AT3G49320 AtDWF4 AT3G51280 AT3G52580 RPL24 AT3G53430 AT3G53890 HTA11 ATCDT1B AT3G55170 RPL23A2 AT3G55605 AT3G55750 ROC2 AT3G56340 AT3G57000 PMD1 AT3G62870 RGXT2 AT4G02230 AT4G02800 AT4G03100 DES-1-LIKE AT4G04940 AT4G05400 AT4G12130 AT4G12600 ATGRP2 AT4G15830 ATHB-2 AT4G17390 AT4G18100 SNI1 ATFKBP53 ATFIB2 AT4G25730 AT4G25740 ATNAP1;1 AT4G26230 AT4G26600 AR192 RRP41L ARAC7 AT4G29410 ATPRMT11 MERI-5 AT4G30800 NFD1 RPS6 AT4G31810 AtENODL15 AtLa1 RSL2 AT4G35850 ATBRI1 AT5G02610 AT5G02870 GYRB2 SIR AT5G04800 ATNAS1 AT5G06360 AT5G06630 ATGRP19 AT5G08180 AT5G08400 AtmtOM64 AtPPa6 EMB3010 AT5G10390 AT5G10400 AT5G11240 AT5G11750 AT5G13140 AAC2 AT5G13520 AT5G14580 ATRGP2 AT5G15750 AT5G16070 AT5G16130 TOZ AT5G19730 AT5G20160 ATCPN21 AT5G22100 AT5G22440 H2B AT5G23900 AT5G24840 AtENODL13 AT5G25580 LON1 HTA7 AT5G28060 AT5G38890 OLI7 ATPHB3 BTI3 POLA3 AT5G42150 AT5G46430 AT5G47930 GFA2 AT5G48360 AT5G48760 TIM8 ATFBR1 AT5G52650 AT5G53070 PTAC15 OLI2 AT5G56710 AT5G56940 RID2 PMR5 AT5G59240 AT5G59850 AT5G60670 GR-RBP3 PDCB1 AT5G62290 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. RPS28 AT5G64670 AT5G64680 AT5G67200
GO:0016070 RNA metabolic process	BP	2.283e-21	emb2386 AtTRM82 AT1G04590 LIP2 AT1G05440 AT1G06790 DRB1 AT1G09800 AtTLP8 HLL AT1G18540 AT1G18850 AT1G20370 AT1G21340 AT1G23280 AT1G23410 AT1G25260 AT1G26470 ANAC009 AT1G26880 RPL10B AT1G27400 NFD3 AT1G34030 ARP1 RACK1B AT1G48830 ATNUC-L1 PLT2 AT1G52930 G-H2AX NOP56 ATMYB72 ARR3 TIM13 AT1G63660 IMP4 AT1G67430 PAN ATWHY2 AP40 AT1G73940 CYCB2;4 AT1G77750 AT1G80750 AT2G17360 AT2G20060 AT2G20450 EDA27 AT2G21580 NF-YB11 AT2G27710 HDA13 TIM10 ATRPAC14 AT2G32220 RPS14 AT2G35790 AT2G36170 RPL24A AT2G37190 AT2G37990 HTA8 WTF9 ATRPL23A AT2G40010 AT2G40660 BHLH100 AT2G41840 AT2G42710 AT2G42720 RPL16A AT2G44120 AT2G44860 ATSPX3 AT2G45710 IAA20 AT2G47610 AT3G01410 AT3G01790 AT3G02560 AT3G02790 AT3G03920 AT3G03960 RPSAb AT3G04840 AT3G04920 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G05560 NSN1 AT3G07110 AT3G07750 AT3G09200 AT3G09630 AT3G10610 AT3G11510 CYC2 ATPRMT3 AtMYB10 AT3G13230 AT3G13940 RIP1 ANAC054 AT3G15460 AT3G16080 AT3G16780 RACK1C AT3G18600 AT3G19440 AT3G19500 TOM40 PLT1 AT3G21330 RPS10 AT3G22660 AT3G23620 AtGRP4 ATL5 EDF3 ATPHB4 CARA AT3G28900 ATBZIP42 AT3G44240 AT3G44590 ATHD2A AT3G47370 BIR6 AtMYB45 ATBBC1 AT3G49080 DMS3 AT3G49910 MYB77 BEH1 GATA18 ATEBP1 AT3G52440 AT3G52580 RPL24 AT3G53430 AT3G53890 ASML1 ROC2 BHLH038 AtCBF5 AT3G57490 AT3G58660 AT3G58700 AT3G60770 AT3G62870 OTP86 AtMYB55 AT4G04940 AT4G05400 AT4G10450 AT4G12600 ATGRP2 AT4G15000 AT4G15640 AT4G16720 ATHB-2 AT4G17390 HAT1 SNI1 MORF1 ATPAP24 ATFKBP53 ATFIB2 AT4G25730 AT4G26600 RRP41L This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G30180 RUXF AT4G30800 NFD1 RPS6 AtLa1 RSL2 AT4G34670 BEH2 AT4G37660 AT5G02050 AT5G02870 AT5G06360 AT5G08180 AT5G09510 EMB3010 AIL6 AT5G11240 ATWRKY75 AT5G13830 AT5G14580 AT5G14600 AT5G15200 AT5G15520 AtbZIP3 AT5G16130 TOZ AtMYB56 WOX12 ATSPX1 AT5G20160 AT5G22100 AT5G22440 ATHD2 PYRD AT5G24840 AT5G25580 AT5G27770 AT5G28060 ATWRKY74 AT5G35530 OLI7 anac094 ATPHB3 POLA3 ATS AT5G42700 NF-YC13 AT5G48760 TIM8 At-RS41 HDG7 ATFBR1 PTAC15 OLI2 AT5G56940 RID2 RPB5C AT5G58420 AT5G59240 AT5G59850 AT5G61880 AT5G62290 AT5G64650 AT5G64670 AT5G64680 AT5G67200
GO:1901566 organonitrogen compound biosynthetic pro...	BP	3.953e-21	LIP2 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis NFD5 AT1G23280 ATIMD3 NFD3 AT1G48570 RACK1B ATNUC-L1 AT1G52930 NOP56 AT1G63660 AT1G64880 ATWHY2 AT1G71850 AT1G77670 ATGSTU20 AT1G79150 PPR596 AT2G15000 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. AT2G22230 ATSMO2 ASP1 HSP60-2 WDR55 AT2G35040 APG10 AT2G37020 AT2G39795 AT2G40660 AT2G44040 AT3G02650 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G08030 AT3G09630 ADK1 AT3G10530 AT3G10610 ATPRMT3 AT3G13160 AT3G14390 AT3G15140 AT3G15460 AT3G16780 RACK1C AT3G18600 BCAT4 TOM40 ATPURC RPS10 AT3G23940 ATL5 CYP71B15 CARA ATHD2A AT3G49080 ATEBP1 AT3G54400 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G59890 EMB3127 AT4G02930 APR DES-1-LIKE AT4G04940 ATNDK1 AT4G12600 ATLEUC1 CYP83A1 CYP702A2 AT4G17390 AT4G18440 AT4G23620 AT4G24830 ATFIB2 ACS7 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 MTO2 AT4G31810 AtLa1 AT4G35850 AT4G36580 ATIPS1 AT5G02050 AT5G02870 SIR ATNAS1 AT5G07090 AtPPa6 AT5G11240 AT5G13140 AK ATIMD1 ATCPN21 ATHD2 PYRD OLI7 AT5G47210 ATRBP45A GR-RBP3 PDCB1 AT5G61880 AT5G64670 ASN2
GO:0044085 cellular component biogenesis	BP	5.238e-20	emb2386 ATPHB2 LIP2 UGT1 AT1G07070 HTB1 AT1G07820 AT1G08220 ATSYP111 AT1G09200 AT1G15250 NRP2 PFL AT1G25260 AT1G26880 AT1G33340 AT1G34030 AT1G41880 RACK1B AT1G48830 ATNUC-L1 UBC20 AT1G52930 G-H2AX IMP4 AP40 AT1G73940 NRP1 AT1G77750 AT2G05220 AT2G19730 AT2G19740 AT2G20420 AT2G20450 EDA27 AT2G22230 HIS4 EMA1 AT2G34480 APG10 RPL24A AT2G37190 AT2G37470 AT2G37990 WTF9 AT2G39390 ATRPL23A AT2G40010 AT2G40510 AT2G40590 AT2G44860 AT2G45710 AT2G47610 AT3G02560 AT3G03920 RPSAb AT3G04920 AT3G06680 AT3G07750 AT3G09200 AT3G10610 AT3G11250 CYC2 AT3G13230 AT3G14600 AT3G16080 AT3G16780 RFC3 TOM40 AT3G22230 AtGRP4 HSP60 ATL5 AT3G28900 ATHD2A AT3G45710 ATBBC1 RPL24 AT3G53430 AT3G53890 AT3G55170 RPL23A2 AT3G55750 ROC2 AT3G56340 AT3G62870 RGXT2 AT4G02230 AT4G04940 AT4G12130 AT4G12600 ATGRP2 AT4G15830 AT4G18100 ATFKBP53 ATFIB2 AT4G25730 ATNAP1;1 AT4G26230 AT4G26600 AT4G29410 RPS6 AtENODL15 AtLa1 ATBRI1 AT5G02610 AT5G04800 AT5G06360 AT5G08400 EMB3010 AT5G10390 AT5G10400 AT5G11240 AT5G11750 AT5G16130 TOZ AT5G20160 AT5G22100 AT5G22440 H2B AT5G23900 LON1 HTA7 AT5G28060 OLI7 AT5G46430 AT5G47930 ATFBR1 AT5G53070 OLI2 AT5G56710 AT5G56940 RID2 AT5G59240 AT5G60670 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. RPS28 AT5G64670
GO:0090304 nucleic acid metabolic process	BP	2.889e-19	emb2386 AtTRM82 AT1G03830 AT1G04590 LIP2 AT1G05440 AT1G06790 ATPCNA1 DRB1 AT1G09800 AT1G10780 AT1G15480 AtTLP8 HLL AT1G18540 AT1G18850 AT1G20370 AT1G21340 AT1G23280 AT1G23410 AT1G25260 AT1G26470 ANAC009 AT1G26880 RPL10B AT1G27400 NFD3 AT1G34030 ARP1 RACK1B AT1G48830 ATNUC-L1 AT1G50400 UBC20 PLT2 AT1G52930 G-H2AX NOP56 ATMYB72 ARR3 TIM13 AT1G63660 IMP4 AT1G67430 PAN ATWHY2 AP40 AT1G73940 CYCB2;4 AT1G77750 AT1G80750 AT2G17360 AT2G20060 AT2G20450 EDA27 AT2G21580 NF-YB11 AT2G27710 HDA13 TIM10 ATRPAC14 ATPCNA2 AT2G32220 RPS14 AT2G35790 AT2G36170 RPL24A AT2G37190 AT2G37990 HTA8 WTF9 ATRPL23A AT2G40010 AT2G40660 BHLH100 AT2G41840 PYM AT2G42710 AT2G42720 RPL16A AT2G44120 AT2G44860 ATSPX3 AT2G45710 IAA20 AT2G47610 AT3G01410 AT3G01790 AT3G02560 AT3G02790 AT3G03130 AT3G03920 AT3G03960 RPSAb AT3G04840 AT3G04920 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G05560 NSN1 AT3G07110 AT3G07750 AT3G09200 AT3G09630 AT3G10610 AT3G11510 CYC2 ATPRMT3 AT3G12340 AtMYB10 AT3G13230 AT3G13940 AT3G14190 RIP1 ANAC054 AT3G15460 AT3G16080 AT3G16780 RACK1C AT3G18600 AT3G19440 AT3G19500 TOM40 PLT1 AT3G21330 RPS10 AT3G22660 AT3G23620 AtGRP4 ATL5 EDF3 ATPHB4 CARA AT3G28900 ATBZIP42 AT3G44240 AT3G44590 ATHD2A AT3G47370 BIR6 AtMYB45 ATBBC1 AT3G49080 DMS3 AT3G49910 MYB77 BEH1 GATA18 AT3G51280 ATEBP1 AT3G52440 AT3G52580 RPL24 AT3G53430 AT3G53890 ASML1 HTA11 ATCDT1B ROC2 BHLH038 AtCBF5 AT3G57490 AT3G58660 AT3G58700 AT3G60660 AT3G60770 AT3G62870 OTP86 AtMYB55 AT4G04940 AT4G05400 AT4G10450 AT4G12600 ATGRP2 AT4G15000 AT4G15640 AT4G16720 ATHB-2 AT4G17390 HAT1 SNI1 MORF1 ATPAP24 ATFKBP53 ATFIB2 AT4G25730 ATNAP1;1 AT4G26600 RRP41L This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G30180 RUXF AT4G30800 AT4G30840 NFD1 RPS6 AtLa1 RSL2 AT4G34670 BEH2 AT4G37660 AT5G01910 AT5G02050 AT5G02870 GYRB2 AT5G06360 AT5G08180 AT5G09510 EMB3010 AIL6 AT5G11240 ATWRKY75 AT5G13520 AT5G13830 AT5G14580 AT5G14600 AT5G15200 AT5G15520 AtbZIP3 AT5G16130 TOZ AtMYB56 WOX12 ATSPX1 AT5G20160 AT5G22100 AT5G22440 ATHD2 PYRD AT5G24840 AT5G25580 AT5G27770 AT5G28060 ATWRKY74 AT5G35530 OLI7 anac094 ATPHB3 POLA3 ATS AT5G42700 NF-YC13 AT5G48360 AT5G48760 TIM8 At-RS41 HDG7 ATFBR1 PTAC15 OLI2 ANQ1 AT5G56940 RID2 RPB5C AT5G58420 AT5G59240 AT5G59850 AT5G61880 AT5G62290 AT5G64650 AT5G64670 AT5G64680 AT5G67200
GO:0019637 organophosphate metabolic process	BP	6.013e-18	ATGPAT2 ATPHB2 LIP2 ATPCNA1 GAPC-2 AT1G13730 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis NFD5 AT1G23280 AT1G23410 NFD3 AT1G48570 RACK1B ATNUC-L1 AT1G52930 NOP56 ARP2 AT1G63660 AT1G64880 AT1G71850 AT1G79150 PPR596 AT2G15000 NPC2 HDA13 ASP1 EMA1 HSP60-2 WDR55 AT2G35040 AT2G37020 ATMTP11 AT2G39795 AT2G40660 AT3G02650 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G09630 AT3G10530 AT3G10610 ATPRMT3 AT3G13160 AT3G15140 AT3G15460 AT3G16780 RACK1C AT3G18600 TOM40 ATPURC RPS10 AT3G23940 ATL5 CARA ATHD2A AT3G49080 ATEBP1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G56340 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G59670 GAE3 AT4G02930 AT4G04940 ATNDK1 AT4G12600 CYP83A1 AT4G17390 AT4G18440 AT4G24830 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G31810 AtLa1 AT4G35850 AT4G36580 mtHsc70-1 ATIPS1 AT5G02050 AT5G02870 AT5G07090 AT5G08180 AT5G11240 ATRGP2 MEX1 ATCPN21 ATHD2 PYRD AT5G24840 AT5G27330 OLI7 GPDHp AT5G47210 ATRBP45A AT5G59240 GR-RBP3 AT5G61880 AT5G64670
GO:0006364 rRNA processing	BP	1.852e-16	LIP2 AT1G48830 ATNUC-L1 AT1G52930 IMP4 AP40 AT1G73940 EDA27 AT2G37990 AT2G44860 AT3G02560 AT3G03920 RPSAb AT3G04920 AT3G07750 AT3G13230 TOM40 AtGRP4 ATHD2A AT3G53890 ROC2 AT4G04940 AT4G12600 ATGRP2 ATFIB2 AT4G25730 AT4G26600 RPS6 AtLa1 EMB3010 AT5G11240 AT5G16130 TOZ AT5G20160 AT5G22440 AT5G28060 ATFBR1 OLI2 RID2 AT5G59240
GO:0016072 rRNA metabolic process	BP	2.501e-16	LIP2 AT1G48830 ATNUC-L1 AT1G52930 IMP4 AP40 AT1G73940 EDA27 AT2G37990 AT2G44860 AT3G02560 AT3G03920 RPSAb AT3G04920 AT3G07750 AT3G13230 TOM40 AtGRP4 ATHD2A AT3G53890 ROC2 AT4G04940 AT4G12600 ATGRP2 ATFIB2 AT4G25730 AT4G26600 RPS6 AtLa1 EMB3010 AT5G11240 AT5G16130 TOZ AT5G20160 AT5G22440 AT5G28060 ATFBR1 OLI2 RID2 AT5G59240
GO:1901135 carbohydrate derivative metabolic proces...	BP	1.312e-14	AtTRM82 LIP2 GAPC-2 NFD5 AT1G21440 AT1G23280 NFD3 AT1G48570 RACK1B ATNUC-L1 AT1G52930 NOP56 AT1G63660 AT1G64880 AT1G71850 AT1G79150 PPR596 AT2G15000 ASP1 AT2G31790 HSP60-2 WDR55 AT2G35040 AT2G37020 AT2G39795 AT2G40660 ATSPX3 AT3G02650 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G09630 ADK1 AT3G10530 ATPRMT3 AT3G13160 AT3G15140 AT3G15460 AT3G16780 RACK1C AT3G18600 BCAT4 TOM40 RPS10 AT3G23940 ATL5 CARA ATHD2A AT3G49080 ATEBP1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G57490 AT3G57940 AT3G58660 GAE3 AT4G02930 APR AT4G04940 ATNDK1 ATLEUC1 CYP83A1 AT4G17390 AT4G18440 ATPAP24 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G31810 AtLa1 AT4G35850 AT4G36580 ATIPS1 AT5G02050 AT5G02870 SIR AT5G07090 AtPPa6 AT5G11240 ATWRKY75 ATIMD1 ATRGP2 MEX1 ATSPX1 ATCPN21 ATHD2 PYRD OLI7 GPDHp AT5G47210 ATRBP45A AT5G59070 GR-RBP3 AT5G61880 AT5G64670
GO:0034470 ncRNA processing	BP	2.345e-14	AtTRM82 LIP2 DRB1 AT1G48830 ATNUC-L1 AT1G52930 IMP4 AP40 AT1G73940 EDA27 AT2G37990 AT2G44860 AT3G02560 AT3G03920 RPSAb AT3G04920 AT3G07750 AT3G13230 TOM40 AtGRP4 ATHD2A AT3G53890 ROC2 AT4G04940 AT4G12600 ATGRP2 ATFIB2 AT4G25730 AT4G26600 RPS6 AtLa1 EMB3010 AT5G11240 AT5G14600 AT5G16130 TOZ AT5G20160 AT5G22440 AT5G24840 AT5G28060 ATFBR1 OLI2 RID2 AT5G59240
GO:0042274 ribosomal small subunit biogenesis	BP	3.027e-14	AT1G48830 AP40 AT2G05220 AT3G02560 RPSAb AT3G04920 AT3G10610 AT3G53890 RPS6 AT5G04800 EMB3010 AT5G16130 AT5G28060 AT5G59240
GO:1901564 organonitrogen compound metabolic proces...	BP	3.838e-14	AtTRM82 LIP2 UGT1 UGT74E2 GAPC-2 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis NFD5 AT1G23280 ATGSTU14 ATIMD3 NFD3 AT1G48570 RACK1B ATNUC-L1 AT1G50110 AT1G52930 NOP56 AT1G63660 AT1G64880 ATWHY2 AT1G71850 AT1G77670 ATGSTU20 AT1G79150 PPR596 AT2G15000 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. AT2G22230 ATSMO2 ASP1 HSP60-2 WDR55 AT2G35040 APG10 AT2G37020 AT2G39795 AT2G40660 AT2G44040 AT3G02650 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G08030 AT3G09630 ADK1 AT3G10530 AT3G10610 ATMES17 ATPRMT3 AT3G13160 AT3G14390 AT3G15140 AT3G15460 AT3G16780 RACK1C AT3G18600 BCAT4 TOM40 ATPURC RPS10 AT3G23940 ATL5 EDF3 CYP71B15 CARA ATHD2A AT3G49080 ATBCAT-3 ATEBP1 AT3G54400 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G59890 EMB3127 AT4G02930 APR DES-1-LIKE AT4G04940 ATNDK1 AT4G12600 ATLEUC1 CYP83A1 CYP702A2 AT4G17390 AT4G18440 AT4G23620 AT4G24830 ATFIB2 ACS7 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 MTO2 AT4G31810 AtLa1 AT4G33420 AT4G35850 AT4G36580 ATIPS1 AT5G02050 AT5G02870 SIR ATNAS1 AT5G07090 AtPPa6 AT5G11240 AT5G13140 AK ATIMD1 MEX1 similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase ATCPN21 ATHD2 PYRD AT5G38200 OLI7 AT5G47210 ATRBP45A AT5G60710 GR-RBP3 PDCB1 AT5G61880 AT5G64670 ASN2 AT5G66060
GO:0044281 small molecule metabolic process	BP	9.913e-13	emb2386 AtTRM82 ATPHB2 LIP2 AT1G05440 UGT1 UGT74E2 AT1G06790 ATPCNA1 ATSYP111 AT1G09800 GAPC-2 AT1G13730 AT1G14185 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis NFD5 AT1G21440 AT1G22440 AT1G23280 AT1G23410 ATIMD3 NFD3 AT1G48570 RACK1B ATNUC-L1 AT1G50110 AT1G52930 GRI NOP56 ATH7 ARP2 AT1G63660 AT1G64880 ATWHY2 AT1G71850 AT1G71870 AP40 ENO1 NRP1 ATPDI6 AT1G77670 GNR1 ATGSTU20 AT1G79150 GAPCP-1 PPR596 AtSOT1 AT2G15000 AT2G20420 FLA6 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. AT2G22230 ATMES1 HDA13 ATSMO2 ASP1 EMA1 AT2G31790 HSP60-2 WDR55 AT2G35040 APG10 AT2G37020 ATMTP11 AT2G39795 AT2G40660 AT2G44040 AtSLD2 AT3G02650 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G07720 AT3G09630 ADK1 AHB2 AT3G10530 AT3G10610 ATMES17 AT3G11830 ATPRMT3 AT3G13160 AT3G14390 mMDH2 AT3G15140 AT3G15460 AT3G16780 RFC3 RACK1C AT3G18600 AT3G19440 BCAT4 TOM40 ATPURC RPS10 AT3G23940 ATL5 AOC3 CYP71B15 CARA BR6OX2 ATHD2A AT3G49080 ATBCAT-3 AtDWF4 ATEBP1 AT3G53220 ASML1 AT3G54400 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPDI1 ATPURM AT3G56340 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G59670 AT3G59890 GAE3 EMB3127 AT4G02930 APR DES-1-LIKE AT4G04940 ATNDK1 ATCPK4 AT4G12130 AT4G12600 ATLEUC1 CYP83A1 CYP702A2 AT4G17390 AT4G18440 AT4G24830 ATFIB2 AT4G25730 ACS7 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 MTO2 AT4G31810 AtLa1 AT4G35850 AT4G36580 mtHsc70-1 ATIPS1 AT5G02050 AT5G02870 SIR ATNAS1 AT5G07090 AT5G08180 AtPPa6 AT5G11240 AT5G13140 AK TRA2 AT5G13520 AT5G13830 ATIMD1 ATRGP2 MEX1 similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase ATCPN21 ATHD2 PYRD AT5G24840 AT5G27330 AT5G38200 OLI7 AT5G47210 AT5G51310 AT5G53920 ATRBP45A AT5G59240 COBL5 GR-RBP3 PDCB1 AT5G61880 AT5G62210 AT5G64670 ASN2 AT5G66060
GO:0006414 translational elongation	BP	3.257e-12	AT1G07930 ATELF5A-3 AT2G05220 AT2G27710 AT2G40010 AT3G04920 AT3G09200 AT3G10610 AT3G11250 AT3G44590 AT3G53890 AT4G02930 AT4G11120 AT4G25890 AT5G04800 AT5G28060 AT5G40040 AT5G47700 AT5G57290 AT5G59240
GO:0007005 mitochondrion organization	BP	8.704e-12	AT1G08220 AT1G14060 AT1G15420 AT1G18850 AT1G26470 AT1G54770 TIM13 AT2G19385 TIM10 EMB2785 AT2G37990 AT3G07750 TOM40 AT3G22660 HSP60 AT3G49320 AT3G55605 AT3G57000 PMD1 AR192 AtmtOM64 AT5G14580 AT5G15750 AT5G24840 LON1 AT5G38890 ATPHB3 AT5G42150 TIM8 GR-RBP3 AT5G62290 AT5G64680
GO:0000478 endonucleolytic cleavage involved in rRN...	BP	5.165e-11	ATNUC-L1 IMP4 AP40 AT2G37990 RPSAb AT3G07750 ATHD2A AT3G53890 AtLa1 AT5G11240 AT5G20160 ATFBR1
GO:0090502 RNA phosphodiester bond hydrolysis, endo...	BP	5.165e-11	ATNUC-L1 IMP4 AP40 AT2G37990 RPSAb AT3G07750 ATHD2A AT3G53890 AtLa1 AT5G11240 AT5G20160 ATFBR1
GO:0006626 protein targeting to mitochondrion	BP	7.345e-11	AT1G14060 AT1G15420 AT1G18850 AT1G26470 AT1G54770 TIM13 AT2G19385 TIM10 EMB2785 AT2G37990 AT3G07750 TOM40 AT3G22660 HSP60 AT3G49320 AT3G55605 AT3G57000 AR192 AtmtOM64 AT5G15750 AT5G24840 AT5G38890 ATPHB3 AT5G42150 TIM8 GR-RBP3 AT5G62290 AT5G64680
GO:0070585 protein localization to mitochondrion	BP	7.345e-11	AT1G14060 AT1G15420 AT1G18850 AT1G26470 AT1G54770 TIM13 AT2G19385 TIM10 EMB2785 AT2G37990 AT3G07750 TOM40 AT3G22660 HSP60 AT3G49320 AT3G55605 AT3G57000 AR192 AtmtOM64 AT5G15750 AT5G24840 AT5G38890 ATPHB3 AT5G42150 TIM8 GR-RBP3 AT5G62290 AT5G64680
GO:0072655 establishment of protein localization to...	BP	7.345e-11	AT1G14060 AT1G15420 AT1G18850 AT1G26470 AT1G54770 TIM13 AT2G19385 TIM10 EMB2785 AT2G37990 AT3G07750 TOM40 AT3G22660 HSP60 AT3G49320 AT3G55605 AT3G57000 AR192 AtmtOM64 AT5G15750 AT5G24840 AT5G38890 ATPHB3 AT5G42150 TIM8 GR-RBP3 AT5G62290 AT5G64680
GO:0006325 chromatin organization	BP	1.126e-10	ATPRMT10 AT1G05440 ATPCNA1 HTB1 AT1G07820 AT1G09200 AT1G10780 DECOY NRP2 AT1G20370 AT1G23410 G-H2AX NRP1 CYCB2;4 AT2G11910 ATPRMT1A HIS4 ATPCNA2 AT2G37470 AT2G38160 HTA8 AT2G39795 AT2G40660 AT3G02650 AT3G03920 AT3G03960 AT3G05810 AT3G09700 CYC2 AT3G13160 AT3G14190 AT3G16780 AT3G18600 DMS3 AT3G51280 HTA11 AT3G55605 AT3G57000 AT4G02800 AT4G05400 AT4G17390 SNI1 ATFKBP53 ATNAP1;1 RRP41L AT4G29410 ATPRMT11 AT4G30800 NFD1 AT4G31810 AT4G35850 AT5G08180 AT5G10390 AT5G10400 AT5G13520 H2B AT5G25580 HTA7 POLA3 ATFBR1 PMR5 GR-RBP3 AT5G67200
GO:0006839 mitochondrial transport	BP	1.425e-10	AT1G14060 AT1G15420 AT1G18850 AT1G26470 AT1G54770 TIM13 AT1G74240 AT2G19385 TIM10 EMB2785 AT2G37990 AT3G07750 TOM40 AT3G20240 AT3G22660 HSP60 AT3G49320 ATPUMP1 AT3G55605 AT3G57000 AR192 AtmtOM64 AT5G15750 AT5G24840 AT5G26200 AT5G38890 ATPHB3 AT5G42150 TIM8 GR-RBP3 AT5G62290 AT5G64680
GO:0000469 cleavage involved in rRNA processing	BP	1.452e-10	ATNUC-L1 IMP4 AP40 AT2G37990 RPSAb AT3G07750 ATHD2A AT3G53890 AtLa1 AT5G11240 AT5G20160 ATFBR1
GO:0034660 ncRNA metabolic process	BP	1.554e-10	AtTRM82 LIP2 DRB1 AT1G48830 ATNUC-L1 AT1G52930 IMP4 AP40 AT1G73940 EDA27 ATRPAC14 AT2G37990 AT2G40660 AT2G44860 AT3G02560 AT3G03920 RPSAb AT3G04920 AT3G07750 AT3G13230 TOM40 AtGRP4 ATHD2A AT3G53890 ROC2 AT4G04940 AT4G12600 ATGRP2 ATFIB2 AT4G25730 AT4G26600 RPS6 AtLa1 EMB3010 AT5G11240 AT5G14600 AT5G16130 TOZ AT5G20160 AT5G22440 AT5G24840 AT5G28060 ATFBR1 OLI2 RID2 AT5G59240
GO:0072594 establishment of protein localization to...	BP	2.421e-10	AT1G03830 AT1G14060 AT1G15420 AT1G15480 AT1G18850 AT1G26470 AT1G54770 TIM13 AT1G63660 AT1G79150 PPR596 AtTic21 AT2G19385 TIM10 EMB2785 EMA1 AT2G37990 AT3G03920 RPSAb AT3G07750 ATPRMT3 AT3G12340 AT3G12390 TOM40 AT3G22660 HSP60 AT3G49320 ATEBP1 AT3G55605 AT3G57000 AT3G57940 AT4G04940 AT4G26600 AR192 NFD1 AtLa1 AT4G40000 TFL-1 AtmtOM64 AT5G09840 AT5G14580 AT5G15750 TOZ PYRD AT5G24840 AT5G27330 AT5G38890 ATPHB3 AT5G42150 TIM8 AT5G59240 GR-RBP3 AT5G62290 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. AT5G64680
GO:0090501 RNA phosphodiester bond hydrolysis	BP	3.691e-10	ATNUC-L1 IMP4 AP40 AT2G37990 RPSAb AT3G07750 ATHD2A AT3G53890 AtLa1 AT5G11240 AT5G20160 ATFBR1
GO:0033365 protein localization to organelle	BP	6.276e-10	AT1G03830 AT1G14060 AT1G15420 AT1G15480 AT1G18850 AT1G26470 AT1G54770 TIM13 AT1G63660 AT1G79150 PPR596 AtTic21 AT2G19385 TIM10 EMB2785 EMA1 AT2G37990 AT3G03920 RPSAb AT3G07750 ATPRMT3 AT3G12340 AT3G12390 TOM40 AT3G22660 HSP60 AT3G49320 ATEBP1 AT3G55605 AT3G57000 AT3G57940 AT4G04940 AT4G26600 AR192 NFD1 AtLa1 AT4G40000 TFL-1 AtmtOM64 AT5G09840 AT5G14580 AT5G15750 TOZ PYRD AT5G24840 AT5G27330 AT5G38890 ATPHB3 AT5G42150 TIM8 AT5G59240 GR-RBP3 AT5G62290 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. AT5G64680
GO:0016482 cytoplasmic transport	BP	6.549e-10	AT1G03830 AT1G13730 AT1G14060 AT1G15420 AT1G15480 AT1G18850 AT1G26470 AT1G54770 TIM13 AT1G63660 AP40 AT1G79150 PPR596 AtTic21 AT2G19385 TIM10 EMB2785 EMA1 AT2G37990 AT3G03920 RPSAb AT3G07750 ATPRMT3 AT3G12340 AT3G12390 TOM40 AT3G22660 HSP60 ATL5 AT3G46280 AT3G49320 ATEBP1 AT3G55605 AT3G57000 AT3G57940 AT4G04940 AT4G26600 AR192 NFD1 AtLa1 AT4G40000 TFL-1 AtmtOM64 AT5G09840 AAC2 AT5G14580 AT5G15750 TOZ PYRD AT5G24840 AT5G27330 AT5G38890 ATPHB3 AT5G42150 AT5G48650 TIM8 AT5G59240 GR-RBP3 AT5G62290 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. RPS28 AT5G64680
GO:0044711 single-organism biosynthetic process	BP	6.584e-10	ATGPAT2 emb2386 ATPHB2 LIP2 AT1G05440 ATPCNA1 ATSYP111 GAPC-2 AT1G13730 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis NFD5 AT1G21440 AT1G22440 AT1G23280 AT1G23410 ATIMD3 NFD3 AT1G48570 RACK1B ATNUC-L1 UBC20 AT1G52930 GRI NOP56 ARP2 AtLPLAT2 AT1G63660 AT1G64880 ATELF5A-3 ATWHY2 AT1G71850 NRP1 AT1G76470 AT1G77670 ATGSTU20 AT1G79150 PPR596 AtSOT1 AT2G05320 AT2G15000 AT2G20420 FLA6 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. AT2G22230 NPC2 HDA13 ATSMO2 ATPCNA2 ASP1 EMA1 AT2G31790 HSP60-2 WDR55 AT2G35040 APG10 AT2G37020 ATMTP11 AT2G39795 AT2G40660 PYM AT2G44040 ATSPX3 AtSLD2 AT3G02650 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein AT3G07720 AT3G08030 AT3G09630 ADK1 AHB2 AT3G10530 AT3G10610 CYC2 AT3G11830 ATPRMT3 AT3G13160 AT3G14390 AT3G15140 AT3G15460 AT3G16780 RACK1C AT3G18600 BCAT4 TOM40 ATPURC RPS10 AT3G23940 ATL5 AOC3 CYP71B15 CARA BR6OX2 ATHD2A AT3G45710 ATPHS2 AT3G49080 AtDWF4 ATEBP1 ASML1 AT3G54400 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G56340 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G59670 AT3G59890 EMB3127 RGXT2 AT4G02930 APR DES-1-LIKE AT4G04940 ATNDK1 ATCPK4 AT4G12600 ATLEUC1 CYP83A1 CYP702A2 AT4G17390 AT4G18440 AT4G23620 AT4G24830 ATPAP24 ATFIB2 ACS7 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 MTO2 AT4G31810 AtLa1 AT4G35850 CYP84A1 AT4G36580 mtHsc70-1 ATBRI1 ATIPS1 AT5G02050 AT5G02870 SIR ATNAS1 AT5G07090 CYP75B1 AT5G08180 AtPPa6 AT5G11240 ATWRKY75 AT5G13140 AK TRA2 AAC2 AT5G13520 ATIMD1 ATRGP2 AT5G16070 MEX1 ATSPX1 ATCPN21 ATHD2 PYRD AT5G24840 AT5G27330 OLI7 AT5G47210 AT5G51310 AT5G53920 PTAC15 ATRBP45A AT5G59070 AT5G59240 COBL5 GR-RBP3 PDCB1 AT5G61880 AT5G62210 AT5G64670 ASN2
GO:0044271 cellular nitrogen compound biosynthetic ...	BP	9.132e-10	ATPHB2 LIP2 AT1G05440 AT1G06790 ATPCNA1 AT1G13730 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis AtTLP8 HLL NFD5 AT1G21340 AT1G23280 AT1G23410 AT1G26470 ANAC009 NFD3 AT1G48570 RACK1B ATNUC-L1 PLT2 AT1G52930 NOP56 ATMYB72 ARR3 ARP2 AT1G63660 AT1G64880 PAN ATWHY2 AT1G71850 CYCB2;4 AT1G77750 GNR1 ATGSTU20 AT1G79150 PPR596 AT2G15000 AT2G20060 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. NF-YB11 HDA13 ATRPAC14 ATPCNA2 ASP1 EMA1 HSP60-2 WDR55 RPS14 AT2G35040 AT2G37020 AT2G39795 AT2G40660 BHLH100 AT2G42710 AT2G42720 ATSPX3 IAA20 AT3G01410 AT3G01790 AT3G02650 AT3G02790 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein NSN1 AT3G08030 AT3G09630 ADK1 AT3G10530 AT3G10610 CYC2 ATPRMT3 AtMYB10 AT3G13160 AT3G13940 AT3G15140 ANAC054 AT3G15460 AT3G16780 RACK1C AT3G18600 AT3G19500 BCAT4 TOM40 PLT1 ATPURC AT3G21330 RPS10 AT3G23940 ATL5 EDF3 CYP71B15 CARA ATBZIP42 ATHD2A AtMYB45 AT3G49080 DMS3 MYB77 BEH1 GATA18 ATEBP1 AT3G52440 ASML1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G56340 BHLH038 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G59670 EMB3127 AtMYB55 AT4G02930 APR AT4G04940 AT4G05400 ATNDK1 AT4G12600 CYP83A1 ATGRP2 CYP702A2 ATHB-2 AT4G17390 HAT1 AT4G18440 SNI1 AT4G23620 AT4G24830 ATPAP24 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G30180 NFD1 AT4G31810 AtLa1 RSL2 AT4G35850 AT4G36580 BEH2 AT4G37660 mtHsc70-1 AT5G02050 AT5G02870 SIR ATNAS1 AT5G07090 AT5G08180 AtPPa6 AIL6 AT5G11240 ATWRKY75 AtbZIP3 AtMYB56 WOX12 ATSPX1 ATHD2 PYRD AT5G24840 AT5G25580 AT5G27330 ATWRKY74 OLI7 anac094 POLA3 ATS AT5G42700 NF-YC13 AT5G47210 HDG7 ATFBR1 PTAC15 ATRBP45A RPB5C AT5G59240 GR-RBP3 AT5G61880 AT5G64650 AT5G64670 ASN2 AT5G67200
GO:0006996 organelle organization	BP	2.181e-09	ATPHB2 ATPRMT10 AT1G05440 UGT1 ATPCNA1 HTB1 AT1G07820 AT1G08220 ATSYP111 AT1G09200 AT1G10780 GAPC-2 AT1G14060 DECOY AT1G15420 AT1G15480 ATLP-1 NRP2 AT1G18850 AT1G20370 AT1G23410 AT1G26470 AT1G33340 AT1G50400 UBC20 AT1G52930 G-H2AX AT1G54770 ATH7 TIM13 AP40 NRP1 CYCB2;4 AT2G05220 AT2G11910 AT2G19385 ATPRMT1A EDA27 HIS4 TIM10 ATPCNA2 EMB2785 HSP60-2 WDR55 APG10 AT2G37470 AT2G37990 AT2G38160 HTA8 AT2G39795 AT2G40660 AT2G42720 AT3G01410 AT3G02650 AT3G03920 AT3G03960 RPSAb AT3G05810 AT3G07750 AT3G09700 AT3G10610 CYC2 ATPRMT3 AT3G13160 AT3G14190 AT3G16780 AT3G18600 TOM40 AT3G22660 HSP60 DMS3 AT3G49320 AT3G51280 HTA11 ATCDT1B AT3G55605 AT3G57000 PMD1 AT4G02800 AT4G03100 AT4G05400 AT4G15830 AT4G17390 SNI1 ATFKBP53 ATNAP1;1 AR192 RRP41L ARAC7 AT4G29410 ATPRMT11 AT4G30800 NFD1 AT4G31810 AtENODL15 AT4G35850 GYRB2 SIR AT5G04800 AT5G08180 AtmtOM64 AT5G10390 AT5G10400 AAC2 AT5G13520 AT5G14580 AT5G15750 AT5G16070 TOZ ATCPN21 H2B AT5G24840 AtENODL13 AT5G25580 LON1 HTA7 AT5G38890 ATPHB3 BTI3 POLA3 AT5G42150 GFA2 AT5G48360 TIM8 ATFBR1 PTAC15 PMR5 GR-RBP3 AT5G62290 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. AT5G64680 AT5G67200
GO:0018130 heterocycle biosynthetic process	BP	2.182e-09	ATPHB2 LIP2 AT1G05440 AT1G06790 ATPCNA1 AT1G13730 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis AtTLP8 HLL NFD5 AT1G21340 AT1G23280 AT1G23410 AT1G26470 ANAC009 NFD3 AT1G48570 RACK1B ATNUC-L1 PLT2 AT1G52930 NOP56 ATMYB72 ARR3 ARP2 AT1G63660 AT1G64880 PAN ATWHY2 AT1G71850 CYCB2;4 AT1G77750 ATGSTU20 AT1G79150 PPR596 AT2G15000 AT2G20060 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. NF-YB11 HDA13 ATRPAC14 ATPCNA2 ASP1 EMA1 HSP60-2 WDR55 RPS14 AT2G35040 APG10 AT2G37020 AT2G39795 AT2G40660 BHLH100 AT2G42710 AT2G42720 ATSPX3 IAA20 AT3G01410 AT3G01790 AT3G02650 AT3G02790 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein NSN1 AT3G08030 AT3G09630 ADK1 AT3G10530 AT3G10610 CYC2 ATPRMT3 AtMYB10 AT3G13160 AT3G13940 AT3G15140 ANAC054 AT3G15460 AT3G16780 RACK1C AT3G18600 AT3G19500 BCAT4 TOM40 PLT1 ATPURC AT3G21330 RPS10 AT3G23940 ATL5 EDF3 CYP71B15 CARA ATBZIP42 ATHD2A AtMYB45 AT3G49080 DMS3 MYB77 BEH1 GATA18 ATEBP1 AT3G52440 ASML1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G56340 BHLH038 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G59670 EMB3127 AtMYB55 AT4G02930 APR AT4G04940 AT4G05400 ATNDK1 AT4G12600 CYP83A1 ATGRP2 CYP702A2 ATHB-2 AT4G17390 HAT1 AT4G18440 SNI1 AT4G23620 AT4G24830 ATPAP24 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G30180 NFD1 AT4G31810 AtLa1 RSL2 AT4G35850 AT4G36580 BEH2 AT4G37660 mtHsc70-1 AT5G02050 AT5G02870 SIR ATNAS1 AT5G07090 AT5G08180 AtPPa6 AIL6 AT5G11240 ATWRKY75 AtbZIP3 AtMYB56 WOX12 ATSPX1 ATHD2 PYRD AT5G24840 AT5G25580 AT5G27330 ATWRKY74 OLI7 anac094 POLA3 ATS AT5G42700 NF-YC13 AT5G47210 HDG7 ATFBR1 PTAC15 ATRBP45A RPB5C AT5G59240 GR-RBP3 AT5G61880 AT5G64650 AT5G64670 AT5G67200
GO:0034654 nucleobase-containing compound biosynthe...	BP	2.397e-09	ATPHB2 AT1G05440 AT1G06790 ATPCNA1 AT1G13730 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis AtTLP8 HLL NFD5 AT1G21340 AT1G23280 AT1G23410 AT1G26470 ANAC009 NFD3 AT1G48570 RACK1B ATNUC-L1 PLT2 AT1G52930 NOP56 ATMYB72 ARR3 ARP2 AT1G63660 AT1G64880 PAN ATWHY2 AT1G71850 CYCB2;4 AT1G77750 AT1G79150 PPR596 AT2G15000 AT2G20060 NF-YB11 HDA13 ATRPAC14 ATPCNA2 ASP1 EMA1 HSP60-2 WDR55 RPS14 AT2G35040 AT2G37020 AT2G39795 AT2G40660 BHLH100 AT2G42710 AT2G42720 ATSPX3 IAA20 AT3G01410 AT3G01790 AT3G02650 AT3G02790 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein NSN1 AT3G09630 ADK1 AT3G10530 AT3G10610 CYC2 ATPRMT3 AtMYB10 AT3G13160 AT3G13940 AT3G15140 ANAC054 AT3G15460 AT3G16780 RACK1C AT3G18600 AT3G19500 TOM40 PLT1 ATPURC AT3G21330 RPS10 AT3G23940 ATL5 EDF3 CARA ATBZIP42 ATHD2A AtMYB45 AT3G49080 DMS3 MYB77 BEH1 GATA18 ATEBP1 AT3G52440 ASML1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G56340 BHLH038 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G59670 AtMYB55 AT4G02930 AT4G04940 AT4G05400 ATNDK1 AT4G12600 ATGRP2 ATHB-2 AT4G17390 HAT1 AT4G18440 SNI1 AT4G24830 ATPAP24 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G30180 NFD1 AT4G31810 AtLa1 RSL2 AT4G35850 AT4G36580 BEH2 AT4G37660 mtHsc70-1 AT5G02050 AT5G02870 AT5G07090 AT5G08180 AIL6 AT5G11240 ATWRKY75 AtbZIP3 AtMYB56 WOX12 ATSPX1 ATHD2 PYRD AT5G24840 AT5G25580 AT5G27330 ATWRKY74 OLI7 anac094 POLA3 ATS AT5G42700 NF-YC13 AT5G47210 HDG7 ATFBR1 PTAC15 ATRBP45A RPB5C AT5G59240 GR-RBP3 AT5G61880 AT5G64650 AT5G64670 AT5G67200
GO:0019438 aromatic compound biosynthetic process	BP	2.879e-09	ATPHB2 LIP2 AT1G05440 AT1G06790 ATPCNA1 AT1G13730 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis AtTLP8 HLL NFD5 AT1G21340 AT1G23280 AT1G23410 AT1G26470 ANAC009 NFD3 AT1G48570 RACK1B ATNUC-L1 PLT2 AT1G52930 GRI NOP56 ATMYB72 ARR3 ARP2 AT1G63660 AT1G64880 PAN ATWHY2 AT1G71850 CYCB2;4 AT1G76470 AT1G77750 ATGSTU20 AT1G79150 PPR596 AtSOT1 AT2G15000 AT2G20060 NF-YB11 HDA13 ATRPAC14 ATPCNA2 ASP1 EMA1 HSP60-2 WDR55 RPS14 AT2G35040 APG10 AT2G37020 AT2G39795 AT2G40660 BHLH100 AT2G42710 AT2G42720 ATSPX3 IAA20 AT3G01410 AT3G01790 AT3G02650 AT3G02790 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein NSN1 AT3G07720 AT3G08030 AT3G09630 ADK1 AT3G10530 AT3G10610 CYC2 ATPRMT3 AtMYB10 AT3G13160 AT3G13940 AT3G15140 ANAC054 AT3G15460 AT3G16780 RACK1C AT3G18600 AT3G19500 BCAT4 TOM40 PLT1 ATPURC AT3G21330 RPS10 AT3G23940 ATL5 EDF3 CYP71B15 CARA ATBZIP42 ATHD2A AtMYB45 AT3G49080 DMS3 MYB77 BEH1 GATA18 ATEBP1 AT3G52440 ASML1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G56340 BHLH038 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G59670 EMB3127 AtMYB55 AT4G02930 APR AT4G04940 AT4G05400 ATNDK1 ATCPK4 AT4G12600 CYP83A1 ATGRP2 CYP702A2 ATHB-2 AT4G17390 HAT1 AT4G18440 SNI1 AT4G23620 AT4G24830 ATPAP24 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G30180 NFD1 AT4G31810 AtLa1 RSL2 AT4G35850 CYP84A1 AT4G36580 BEH2 AT4G37660 mtHsc70-1 AT5G02050 AT5G02870 SIR AT5G07090 AT5G08180 AtPPa6 AIL6 AT5G11240 ATWRKY75 TRA2 AtbZIP3 AtMYB56 WOX12 ATSPX1 ATHD2 PYRD AT5G24840 AT5G25580 AT5G27330 ATWRKY74 OLI7 anac094 POLA3 ATS AT5G42700 NF-YC13 AT5G47210 HDG7 ATFBR1 PTAC15 ATRBP45A RPB5C AT5G59240 COBL5 GR-RBP3 AT5G61880 AT5G64650 AT5G64670 AT5G67200
GO:0051276 chromosome organization	BP	4.192e-09	ATPRMT10 AT1G05440 ATPCNA1 HTB1 AT1G07820 AT1G09200 AT1G10780 DECOY AT1G15480 NRP2 AT1G20370 AT1G23410 AT1G50400 G-H2AX NRP1 CYCB2;4 AT2G11910 ATPRMT1A HIS4 ATPCNA2 AT2G37470 AT2G38160 HTA8 AT2G39795 AT2G40660 AT2G42720 AT3G01410 AT3G02650 AT3G03920 AT3G03960 AT3G05810 AT3G09700 CYC2 AT3G13160 AT3G14190 AT3G16780 AT3G18600 DMS3 AT3G51280 HTA11 ATCDT1B AT3G55605 AT3G57000 AT4G02800 AT4G05400 AT4G17390 SNI1 ATFKBP53 ATNAP1;1 RRP41L AT4G29410 ATPRMT11 AT4G30800 NFD1 AT4G31810 AT4G35850 GYRB2 AT5G08180 AT5G10390 AT5G10400 AT5G13520 TOZ H2B AT5G25580 HTA7 POLA3 ATFBR1 PMR5 GR-RBP3 AT5G67200
GO:0006479 protein methylation	BP	9.861e-09	ATPRMT10 AT1G05440 ATPCNA1 DECOY AT1G23410 CYCB2;4 ATPRMT1A ATPCNA2 HTA8 AT2G39795 AT2G40660 AT3G02650 AT3G03920 AT3G03960 CYC2 ATPRMT3 AT3G13160 AT3G14190 AT3G16780 AT3G18600 DMS3 AT3G51280 AT3G55605 AT3G57000 AT4G05400 AT4G17390 SNI1 RRP41L AT4G29410 ATPRMT11 AT4G30800 NFD1 AT4G31810 AT4G35850 AT5G08180 AT5G13520 AT5G25580 POLA3 ATFBR1 AT5G53920 GR-RBP3 AT5G67200
GO:0008213 protein alkylation	BP	9.861e-09	ATPRMT10 AT1G05440 ATPCNA1 DECOY AT1G23410 CYCB2;4 ATPRMT1A ATPCNA2 HTA8 AT2G39795 AT2G40660 AT3G02650 AT3G03920 AT3G03960 CYC2 ATPRMT3 AT3G13160 AT3G14190 AT3G16780 AT3G18600 DMS3 AT3G51280 AT3G55605 AT3G57000 AT4G05400 AT4G17390 SNI1 RRP41L AT4G29410 ATPRMT11 AT4G30800 NFD1 AT4G31810 AT4G35850 AT5G08180 AT5G13520 AT5G25580 POLA3 ATFBR1 AT5G53920 GR-RBP3 AT5G67200
GO:0018022 peptidyl-lysine methylation	BP	1.771e-08	ATPRMT10 AT1G05440 ATPCNA1 DECOY AT1G23410 CYCB2;4 ATPRMT1A ATPCNA2 HTA8 AT2G39795 AT2G40660 AT3G02650 AT3G03920 AT3G03960 CYC2 AT3G13160 AT3G14190 AT3G16780 AT3G18600 DMS3 AT3G51280 AT3G55605 AT3G57000 AT4G17390 SNI1 RRP41L AT4G29410 ATPRMT11 AT4G30800 NFD1 AT4G31810 AT4G35850 AT5G08180 AT5G13520 AT5G25580 POLA3 GR-RBP3 AT5G67200
GO:0034968 histone lysine methylation	BP	1.771e-08	ATPRMT10 AT1G05440 ATPCNA1 DECOY AT1G23410 CYCB2;4 ATPRMT1A ATPCNA2 HTA8 AT2G39795 AT2G40660 AT3G02650 AT3G03920 AT3G03960 CYC2 AT3G13160 AT3G14190 AT3G16780 AT3G18600 DMS3 AT3G51280 AT3G55605 AT3G57000 AT4G17390 SNI1 RRP41L AT4G29410 ATPRMT11 AT4G30800 NFD1 AT4G31810 AT4G35850 AT5G08180 AT5G13520 AT5G25580 POLA3 GR-RBP3 AT5G67200
GO:1901362 organic cyclic compound biosynthetic pro...	BP	1.952e-08	ATPHB2 LIP2 AT1G05440 AT1G06790 ATPCNA1 ATSYP111 AT1G13730 encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis AtTLP8 HLL NFD5 AT1G21340 AT1G22440 AT1G23280 AT1G23410 AT1G26470 ANAC009 NFD3 AT1G48570 RACK1B ATNUC-L1 PLT2 AT1G52930 GRI NOP56 ATMYB72 ARR3 ARP2 AT1G63660 AT1G64880 PAN ATWHY2 AT1G71850 CYCB2;4 AT1G76470 AT1G77750 ATGSTU20 AT1G79150 PPR596 AtSOT1 AT2G15000 AT2G20060 FLA6 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. NF-YB11 HDA13 ATSMO2 ATRPAC14 ATPCNA2 ASP1 EMA1 HSP60-2 WDR55 RPS14 AT2G35040 APG10 AT2G37020 AT2G39795 AT2G40660 BHLH100 AT2G42710 AT2G42720 ATSPX3 IAA20 AT3G01410 AT3G01790 AT3G02650 AT3G02790 AT3G03960 AT3G04840 SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein NSN1 AT3G07720 AT3G08030 AT3G09630 ADK1 AT3G10530 AT3G10610 CYC2 ATPRMT3 AtMYB10 AT3G13160 AT3G13940 AT3G15140 ANAC054 AT3G15460 AT3G16780 RACK1C AT3G18600 AT3G19500 BCAT4 TOM40 PLT1 ATPURC AT3G21330 RPS10 AT3G23940 ATL5 EDF3 CYP71B15 CARA BR6OX2 ATBZIP42 ATHD2A AtMYB45 AT3G49080 DMS3 MYB77 AtDWF4 BEH1 GATA18 ATEBP1 AT3G52440 ASML1 encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis ATPURM AT3G56340 BHLH038 AtCBF5 AT3G57490 AT3G57940 AT3G58610 AT3G58660 AT3G59670 EMB3127 AtMYB55 AT4G02930 APR AT4G04940 AT4G05400 ATNDK1 ATCPK4 AT4G12600 CYP83A1 ATGRP2 CYP702A2 ATHB-2 AT4G17390 HAT1 AT4G18440 SNI1 AT4G23620 AT4G24830 ATPAP24 ATFIB2 AR192 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase AT4G29410 AT4G30180 NFD1 AT4G31810 AtLa1 RSL2 AT4G35850 CYP84A1 AT4G36580 BEH2 AT4G37660 mtHsc70-1 AT5G02050 AT5G02870 SIR ATNAS1 AT5G07090 AT5G08180 AtPPa6 AIL6 AT5G11240 ATWRKY75 TRA2 AtbZIP3 AtMYB56 WOX12 ATSPX1 ATHD2 PYRD AT5G24840 AT5G25580 AT5G27330 ATWRKY74 OLI7 anac094 POLA3 ATS AT5G42700 NF-YC13 AT5G47210 HDG7 ATFBR1 PTAC15 ATRBP45A RPB5C AT5G59240 COBL5 GR-RBP3 AT5G61880 AT5G64650 AT5G64670 AT5G67200"
GO:0006913 nucleocytoplasmic transport	BP	2.612e-08	AT1G03830 AT1G13730 AT1G15480 AT1G63660 AP40 AT1G79150 PPR596 EMA1 AT2G37990 AT3G03920 RPSAb ATPRMT3 AT3G12340 AT3G12390 AT3G22660 ATL5 ATEBP1 AT3G57940 AT4G04940 AT4G26600 NFD1 AtLa1 AT4G40000 AT5G09840 AT5G14580 TOZ PYRD AT5G27330 AT5G48650 AT5G59240 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. RPS28
GO:0051169 nuclear transport	BP	2.612e-08	AT1G03830 AT1G13730 AT1G15480 AT1G63660 AP40 AT1G79150 PPR596 EMA1 AT2G37990 AT3G03920 RPSAb ATPRMT3 AT3G12340 AT3G12390 AT3G22660 ATL5 ATEBP1 AT3G57940 AT4G04940 AT4G26600 NFD1 AtLa1 AT4G40000 AT5G09840 AT5G14580 TOZ PYRD AT5G27330 AT5G48650 AT5G59240 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. RPS28
GO:0006605 protein targeting	BP	2.995e-08	AT1G03830 AT1G14060 AT1G15420 AT1G15480 AT1G18850 AT1G26470 AT1G28190 AT1G54770 TIM13 AT1G63660 AT1G79150 PPR596 AtSOT1 AtTic21 AT2G19385 TIM10 EMB2785 EMA1 AT2G37990 AT3G03920 RPSAb AT3G07750 ATPRMT3 AT3G12340 AT3G12390 TOM40 AT3G22660 HSP60 AOC3 CYP71B15 AT3G49320 ATEBP1 AT3G55605 AT3G57000 AT3G57940 AT4G04940 AT4G26600 AR192 NFD1 AtLa1 AT4G40000 TFL-1 AtmtOM64 AtPPa6 AT5G09840 AAC2 AT5G14580 AT5G15750 TOZ PYRD AT5G24840 AT5G27330 AT5G38890 ATPHB3 AT5G42150 TIM8 AT5G59240 GR-RBP3 AT5G62290 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. AT5G64680
GO:1902580 single-organism cellular localization	BP	2.995e-08	AT1G03830 AT1G14060 AT1G15420 AT1G15480 AT1G18850 AT1G26470 AT1G28190 AT1G54770 TIM13 AT1G63660 AT1G79150 PPR596 AtSOT1 AtTic21 AT2G19385 TIM10 EMB2785 EMA1 AT2G37990 AT3G03920 RPSAb AT3G07750 ATPRMT3 AT3G12340 AT3G12390 TOM40 AT3G22660 HSP60 AOC3 CYP71B15 AT3G49320 ATEBP1 AT3G55605 AT3G57000 AT3G57940 AT4G04940 AT4G26600 AR192 NFD1 AtLa1 AT4G40000 TFL-1 AtmtOM64 AtPPa6 AT5G09840 AAC2 AT5G14580 AT5G15750 TOZ PYRD AT5G24840 AT5G27330 AT5G38890 ATPHB3 AT5G42150 TIM8 AT5G59240 GR-RBP3 AT5G62290 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. AT5G64680
GO:0016571 histone methylation	BP	4.272e-08	ATPRMT10 AT1G05440 ATPCNA1 DECOY AT1G23410 CYCB2;4 ATPRMT1A ATPCNA2 HTA8 AT2G39795 AT2G40660 AT3G02650 AT3G03920 AT3G03960 CYC2 AT3G13160 AT3G14190 AT3G16780 AT3G18600 DMS3 AT3G51280 AT3G55605 AT3G57000 AT4G05400 AT4G17390 SNI1 RRP41L AT4G29410 ATPRMT11 AT4G30800 NFD1 AT4G31810 AT4G35850 AT5G08180 AT5G13520 AT5G25580 POLA3 ATFBR1 GR-RBP3 AT5G67200
GO:0006606 protein import into nucleus	BP	9.093e-08	AT1G03830 AT1G15480 AT1G63660 AT1G79150 PPR596 EMA1 AT2G37990 AT3G03920 RPSAb ATPRMT3 AT3G12340 AT3G12390 AT3G22660 ATEBP1 AT3G57940 AT4G04940 AT4G26600 NFD1 AtLa1 AT4G40000 AT5G09840 AT5G14580 TOZ PYRD AT5G27330 AT5G59240 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division."
GO:0044744 protein targeting to nucleus	BP	9.093e-08	AT1G03830 AT1G15480 AT1G63660 AT1G79150 PPR596 EMA1 AT2G37990 AT3G03920 RPSAb ATPRMT3 AT3G12340 AT3G12390 AT3G22660 ATEBP1 AT3G57940 AT4G04940 AT4G26600 NFD1 AtLa1 AT4G40000 AT5G09840 AT5G14580 TOZ PYRD AT5G27330 AT5G59240 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division."
GO:1902593 single-organism nuclear import	BP	9.093e-08	AT1G03830 AT1G15480 AT1G63660 AT1G79150 PPR596 EMA1 AT2G37990 AT3G03920 RPSAb ATPRMT3 AT3G12340 AT3G12390 AT3G22660 ATEBP1 AT3G57940 AT4G04940 AT4G26600 NFD1 AtLa1 AT4G40000 AT5G09840 AT5G14580 TOZ PYRD AT5G27330 AT5G59240 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division."
GO:0016570 histone modification	BP	9.595e-08	ATPRMT10 AT1G05440 ATPCNA1 AT1G10780 DECOY AT1G23410 CYCB2;4 ATPRMT1A ATPCNA2 AT2G38160 HTA8 AT2G39795 AT2G40660 AT3G02650 AT3G03920 AT3G03960 CYC2 AT3G13160 AT3G14190 AT3G16780 AT3G18600 DMS3 AT3G51280 AT3G55605 AT3G57000 AT4G02800 AT4G05400 AT4G17390 SNI1 ATFKBP53 RRP41L AT4G29410 ATPRMT11 AT4G30800 NFD1 AT4G31810 AT4G35850 AT5G08180 AT5G13520 AT5G25580 POLA3 ATFBR1 GR-RBP3 AT5G67200
GO:0051170 nuclear import	BP	1.082e-07	AT1G03830 AT1G15480 AT1G63660 AT1G79150 PPR596 EMA1 AT2G37990 AT3G03920 RPSAb ATPRMT3 AT3G12340 AT3G12390 AT3G22660 ATEBP1 AT3G57940 AT4G04940 AT4G26600 NFD1 AtLa1 AT4G40000 AT5G09840 AT5G14580 TOZ PYRD AT5G27330 AT5G59240 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division."
GO:0022622 root system development	BP	1.523e-07	RGF2 NRP2 ANAC009 AT1G34510 RACK1B ATNUC-L1 PLT2 AtRHD6 ATBS1 NRP1 GAPCP-1 FLA6 LAX2 AT2G22230 ASL18 IAA20 ANAC054 RACK1C PLT1 ATL5 IDL1 AT3G49960 MYB77 RHS13 ATHB-2 RPL16B ATIRT1 AtG3Pp2 AT4G25790 ATXTH14 AT4G30320 RSL2 AtPLAIVA ATBRI1 AIL6 ATWRKY75 AT5G13140 DGR2 ATPHB3 AT5G51310 FLA1 OLI2 RHS19
GO:0048364 root development	BP	1.523e-07	RGF2 NRP2 ANAC009 AT1G34510 RACK1B ATNUC-L1 PLT2 AtRHD6 ATBS1 NRP1 GAPCP-1 FLA6 LAX2 AT2G22230 ASL18 IAA20 ANAC054 RACK1C PLT1 ATL5 IDL1 AT3G49960 MYB77 RHS13 ATHB-2 RPL16B ATIRT1 AtG3Pp2 AT4G25790 ATXTH14 AT4G30320 RSL2 AtPLAIVA ATBRI1 AIL6 ATWRKY75 AT5G13140 DGR2 ATPHB3 AT5G51310 FLA1 OLI2 RHS19
GO:0034504 protein localization to nucleus	BP	1.524e-07	AT1G03830 AT1G15480 AT1G63660 AT1G79150 PPR596 EMA1 AT2G37990 AT3G03920 RPSAb ATPRMT3 AT3G12340 AT3G12390 AT3G22660 ATEBP1 AT3G57940 AT4G04940 AT4G26600 NFD1 AtLa1 AT4G40000 AT5G09840 AT5G14580 TOZ PYRD AT5G27330 AT5G59240 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division."
GO:0006886 intracellular protein transport	BP	2.400e-07	AT1G03830 ATSYP111 AT1G14060 AT1G15420 AT1G15480 AT1G18850 AT1G26470 AT1G28190 AT1G54770 TIM13 AT1G63660 TOM7-2 AT1G79150 PPR596 AtSOT1 AtTic21 AT2G19385 TIM10 EMB2785 EMA1 AT2G37990 AT3G03920 RPSAb AT3G07750 AT3G10780 ATPRMT3 AT3G12340 AT3G12390 TOM40 AT3G22660 HSP60 AOC3 CYP71B15 AT3G49320 ATEBP1 AT3G55605 AT3G57000 AT3G57940 AT4G04940 AT4G26600 AR192 NFD1 AtLa1 AT4G40000 TFL-1 AtmtOM64 AtPPa6 AT5G09840 AAC2 AT5G14580 AT5G15750 TOZ PYRD AT5G24840 AT5G27330 AT5G27395 AT5G38890 ATPHB3 AT5G42150 TIM8 AT5G59240 GR-RBP3 AT5G62290 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. AT5G64680