4.0:Analysis result:Information of module

    Top 100 most enriched GO terms

GOID/Term	Ontology	p-value	Genes
GO:0044711 single-organism biosynthetic process	BP	7.497e-194	AT1G01080 KCS1 AtFKGP ATGPAT4 PIP1;3 AT1G01630 AT1G02150 CER1 AtSAM1 ATCSLD5 AtD27 FZL AtBE2 POR ATHM1 AT1G04040 KCS2 AT1G04420 AT1G04430 LIP2 AT1G04680 TOR2 AT1G05150 emb2394 ATCTL1 encodes a flavonol-7-O-rhamnosyltransferase involved in the formation of rhamnosylated flavonols RHON1 ATGSL07 HPD encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase OE23 AtSLP1 ATNDI1 AT1G07280 EMB2784 ATPCNA1 AT1G07440 KCS3 AXS2 ADT6 PSAO FATB ALB-1V ABC1 AVDE1 ATSYP111 AT1G09310 CRB AT1G09440 iPGAM1 AtHIR1 ACLA-1 AT1G10740 ATFD1 ATSS3 CLPP6 ADT1 ATGLX1 AT1G11860 ATSRS AT1G12080 ELP ATNRT1 AT1G12800 AFB3 GATL3 AOC4 AT1G13650 AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14270 SBH2 AT1G14345 PSS1 CYCA2;3 AT1G15710 CP24 ATCCR1 NDF1 ADAP AT1G16080 CYP79F2 BUS1 ATMYB58 UP6 SPS2 AtHBP1 FUG1 AT1G18060 AT1G18440 AT1G18460 ATSOT17 AT1G18660 NDF6 AT1G19140 LHCA2*1 KCS4 JMT AT1G19710 TUB5 ATLFNR2 ARAC4 CVP1 DRT112 AT1G21440 ATNADK2 AT1G22630 AT1G22850 AOAT1 AOR UGT74B1 ASB1 CER60 Cpn60beta4 ARAB-1 AT1G29700 PDH-E1 PSAK AAE14 UGT78D1 AT1G30690 IMPL1 AK-HSDH PSAF FEI1 ATROPGEF14 AT1G31710 CYP97A3 ACBP PRK ACT1 PKp3 AT1G32470 GBSS1 PRPL11 AT1G33110 AT-GTL1 EMB3003 AT1G35420 RPL21C ACC1 AT1G36280 PMI1 expressed protein localized to the inner membrane of the chloroplast. GAPB AtcFBP CP22 ATMCM2 AT1G44920 AtBGAL5 DGAT3 ACD1 AtPMEAMT ACT8 AT1G49380 LACS2 AtCXE5 GDC1 AT1G51110 AT1G51340 4CL.1 PSAH-2 mMDH1 ATMUM4 ABCD2 ACP2 ATATG18H AtTLP18.3 AT1G54790 ATLOX1 AT1G55260 AT1G55360 ZKT CPN60B PSAG UKL3 ATCSLE1 ATSERAT2;1 AT1G55960 AT1G56050 AT1G56190 ATNAS4 AT1G56500 AT1G57770 ATATP-PRT1 AT1G58170 AtHEMA1 SQE1 AT1G60000 DHNS ABC4 ATB2 LHCA3 ACO2 FMO KAS AT1G62660 ATSCO1 AT1G62780 NRS/ER LACS3 BDG1 TUA1 NDF2 AMT1;2 G-TMT 4CL3 AT1G65230 ATPAO4 FMO AT1G65870 cICDH AT1G66130 ATGSR2 AT1G66330 RGL AT1G66430 DIN9 ATLOX6 AT1G67700 ATKCR1 PSBY ATFXG1 AT1G67950 ATHPR1 AT1G68260 CER6 PSRP3/1 AT1G68600 PHYLLO BIM2 FLN2 AtTCP15 HEMB1 NRT1.7 ATCYCD1;1 AT1G70280 PG2 AT1G70550 AOAT2 JAZ9 PGM2 AT1G70985 AT1G71070 AT1G72230 AT1G72500 AT1G72810 LPA3 AT1G73110 AT1G73170 ATPIN1 AT1G73600 AT1G73655 AT1G74070 ATSOT18 ATSOT16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATKAS2 emb2184 UMAMIT5 AtGH9B7 PETE1 sks5 AT1G76450 AtHMGR1 AT1G76570 ACR3 AT1G77090 LACS9 LAX3 AT1G78040 ATTPPB ATGSTU20 SPS1 ATRHM1 ATTPS1 ATGGH2 ATLUP1 PSBR ECT8 AtkdsA1 ATNADP-ME4 CS17 AT1G80030 NIP6 APG2 RGA AT2G03420 RNE LACS8 AT2G04700 FLA7 AT2G05920 ENR1 AtOPR3 EXGT-A1 AtXYP2 AKN1 AGP9 AT2G15020 ATHNIR KCS9 MCM4 ATHMA4 AT2G19940 ATCLASP ATGLK1 ALF1 LIP1 PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 AT2G21385 AT2G21860 CSI1 PLAT2 AT2G22230 ATIPS2 AAT SCPL8 AT2G23390 NAPRT2 ATMES3 YCF37 AT2G24060 ALDH11A3 AT2G24280 AFR AT2G25830 CYP711A1 FDH ER ATDUF3 HO2 KCS11 AT2G26730 ATCDPMEK AGO4 AT2G27290 AT2G27680 ADT3 ALB3 ADCS TUB7 PY ANTR1 AtFAD3 EMB3147 ATFC-II ATC4H CYP71A13 ATCOQ3 FTSH2 AT2G31040 BBX25 AT2G31670 AT2G31790 ATGSL03 BAM6 AT2G32640 ATCB5-B PRPL28 GALS1 AtCRL2 AT2G34460 AT2G34590 ATFAH1 EDA3 AT2G35260 GDCH AT2G35390 AT2G35410 SKL2 FEI2 ATCSLA07 AT2G35840 AT2G35880 BLH1 NHL12 ATE2FA AT2G36145 MAT3 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 UMAMIT12 AT2G37660 CAC3 AtAUX1 PSRP4 PDX1L4 ATPDX1.1 GAUT7 ATMVD1 PIP2;6 ATMTP11 PnsL1 RCA CYT1 ATISA1 AT2G40400 HEME2 ATKT2 ETG1 CYP98A3 SSL2 NTRC AT2G42130 AT2G42220 ATPPC2 AT2G42690 AT2G43030 ATLEUD1 BIO2 Encodes a defensin-like (DEFL) family protein. AT2G43560 FAB2 ACS1 BGLU26 CHL-CPN10 AT2G44920 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis BEN1 ATPEX16 AT2G45990 KPHMT1 AtSLD2 AtGolS1 CER8 CAO PHR2 CRR6 DEG2 AT3G01060 AtCGS1 AtSS2 PnsL3 ATCYP38 ATBCA1 ATPPT2 AK3 ATKT4 ATRGP1 AT3G02250 GAUT9 ATF1 AT3G02750 ATGSTF11 AtUGP1 PDE326 AT3G03770 ATMS2 EMB3119 PDE181 ATCYSD1 Encodes a defensin-like (DEFL) family protein. AT3G06980 AT3G07270 ATCSLC06 AT3G08030 AT3G08680 LHCB4.2 AT3G09050 PTAC13 CRM3 ADK1 OMR1 AtLCY PAL4 AHB2 ABCI6 AT3G10720 LSF2 AtFAD7 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 ATHST ACT11 PGK1 AT3G12930 ATSERAT2;2 AT3G13120 PUT4 CYP90D1 FLU ESM1 ATPME3 ATGSL04 ATRHM3 HEME1 PRPS20 ATHM4 AT3G15520 AT3G15570 ADS3 MFP1 NDF4 EMB2083 ABCG29 AT3G16370 JAL35 LPD1 HCF107 ECT6 MAT4 ATACP5 NMT1 EMB1270 EMB1865 AT3G18500 ACT2 AT3G19000 ATCAD4 AT3G19480 BCAT4 CBB1 AT3G20390 GluTRBP 4CL5 4CL2 GLTP3 ADOF2 UGT84A2 AT3G22520 ELIP APS1 PKP-ALPHA AT3G23090 bHLH34 ATPHO1 AT3G23510 AT3G23530 AT3G23700 ATSAHH2 GAE6 HCF101 ALDH1A PLSP1 ICK3 GAUT8 AFH1 ATGHBDH AAPT2 AT3G25660 AtCHUP1 AOC1 AOC2 AT3G25805 LTA2 ATPRX AT3G26450 GAMMA-TIP2 ORF02 GAPA CCB1 ATSKL1 ATTSO2 ATMDAR4 UMAMIT47 AT3G28200 AT3G28220 AT3G28460 ABCB19 AT3G29185 ATCM1 AAO2 ATNIT1 RPL9 AT3G45160 PTAC16 CAB4 AT3G47650 AT3G48200 AT3G48420 AT3G48460 AHAS GSA2 BAM2 ARLA1C ICK2 AT3G50685 OEC33 AT3G51140 GMD2 F3'H AT3G51510 ATG4 PSRP2 CP33 AT3G52500 FTSZ2-2 ELL1 CYP97C1 ATPAL2 AtPIP2;1 PYRR AT3G53960 HCEF1 AT3G54210 AT3G54290 AT3G54400 ATGRXCP PMR6 PGPS2 A11 PDE329 ATTSC13 P5CS2 ATDFD SBPASE AT3G56010 UGP3 AT3G56290 AT3G56680 PSRP5 ACSF AT3G57220 ATWRKY69 GAUT15 IPMI1 PIF5 GUN4 AT3G59780 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. CDS5 AT3G60750 MAP65-4 GAUT1 ARATH;BSAS3;1 AtSLD1 AT3G61870 CYP20-3 CP12 ATMYB11 APG3 CSP41A OEP6 AtcpRRF APG1 EMB3126 ATCCD1 AtGPAT8 AT4G00560 AT4G00895 TROL GT72B1 MGP4 AT4G01310 AtSAM2 ATGPAT3 ATXT2 AT4G02530 EOL1 PSAD-1 EMB3129 AFB1 PETC AT4G04340 APR ATPC1 AtMYB74 ATK5 Encodes a putative glycosyl hydrolase family 10 protein (xylanase). APX4 ATPD ATSPS4F AT4G10300 LHCB5 AT4G10390 BASS5 SKU5 FLA2 AT4G13050 CYP83A1 AT4G13840 ATSAHH1 The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. KINESIN-12A PDE226 AT4G14360 APS3 ELIP2 TUA6 CYP97B3 ATCCT2 AtCLA1 SPK1 ATOPT3 CLPR4 AtBAM3 AT4G17560 LIL3:1 AT4G17650 AT4G17740 ATTPS5 MYC4 AT4G18030 ATSS4 CH-42 CCD4 AT4G19460 AK-HSDH PTAC14 BAM3 AT4G20760 ATFAH2 PyrD ATRP1 PRXR1 sks4 AKT2 ATSMO1-2 PGR5-LIKE AT4G23670 ATCSLG3 ATCSLG1 CER2 PGI ATHB22 TAR2 AT4G24750 ATRBP31 AT4G24930 AT4G25030 ACP4 CHLM B1 CGA1 AtFBA5 GDPDL3 AT4G26710 MAP65-2 VTC2 AT4G26860 FAD4 ATK2 CIP7 AT4G27435 AtENODL2 NARA5 AT4G28080 PSB28 PSAE-1 emb2726 AT4G30020 AHA2 AT4G30470 GGP1 FAD6 AT4G31310 AT4G31530 HCF153 EMB2797 PGR3 PDE334 AT4G32330 AtCESA1 AT4G32590 ATSDX1 ATH1 AtGLDP1 AT4G33110 ATHDA14 AT4G33500 AtHMAC6 KUP5 AT4G33740 ATOST1 CCoAOMT1 AT4G34090 SEP1 CLB6 ATCAP1 ERG9 SQS2 ASE2 MRL1 AT4G34920 SLP2 HCF244 XCP1 AFT MCA1 AT4G36180 CYP84A1 AT4G36390 AT4G36530 AtPLT6 AtGGPPS11 ACD2 SQE3 XTH7 SHM1 ATCAD6 ATCAD7 AQI ATROPGEF1 AtVAB2 ATMYB4 ROC1 ATPRP4 AtFBA2 AT4G39040 VHA-A3 ATSEC14 APL3 ATCAD9 ATCESA2 SAMC1 ATSK2 ATIPS1 AKN2 CYP79B2 AT4G39970 DHS1 AT5G01020 AT5G01090 SQD2 AT5G01260 ATPDX1 Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT-HSC70-1 AT5G02940 AtNCS1 SBE2.2 54CP FD-GOGAT ATLDA KCS19 SIR ACR12 ATNAS1 ATCESA3 AT5G05180 AtCHIL AtFAD8 ATEGY2 2-Cys TBR AT5G07020 ERL2 ATMYB29 CYP75B1 AT5G08050 FTRA2 AT5G08415 AT5G08430 PDE340 ATFLS1 AT5G08650 PI-4KBETA2 AtPPa6 PMDH2 CESA5 PROPEP5 ATMIPS3 AST68 ASN3 PAS2 AT5G10690 ATSPS2F PPD5 AtMYB3R4 ATNADP-ME2 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 DiT1 AT5G12970 ATGSL12 ATCYP20-2 AT5G13140 IQD11 EMB3136 ABAR SIG4 CCS52B ATCHS AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 EMB3137 AT5G14410 AT5G14460 AT5G14500 ATDEF2 AT5G14700 BETA AO AT5G14910 AT5G14970 GASA4 AtENODL17 GAUT14 BCCP2 LNG1 AT5G15910 AT5G15950 AtNIK1 AT5G16240 VAT1 BCCP LRR1 AtMYB43 UGT78D2 PSY AtUGP2 MEX1 ATCIMS PCB2 BAM9 ADG2 AT5G19940 AtHBP5 ATMGD2 ATCPN21 AT5G21100 AT5G21105 ATHMA8 AT5G22340 IMS3 CaS HCF136 TUB8 ATSIG5 SQE5 AT5G24155 ATSS1 AT5G26330 AT5G27560 ATCYSD2 DES1 AT5G28500 GME ARRPS1 AT5G34930 CAC2 ATGSL1 atylmg3 AT5G36160 ATPRFB CAT3 AT5G38520 CRR7 UDG4 DEG8 RS5 AT5G40500 ATUBC8 AT5G41760 FTSH5 AOS ATIPK1 NDH18 KCS20 AT5G44020 ABCI21 ATGLK2 TUB4 AT5G44520 AT5G45280 ATFKBP13 CHL AtNUDT11 APE2 KAS1 AT5G46420 AT5G46580 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. FPS1 GAUT4 FRA1 AMK2 AACT2 ADG1 AT5G48590 KAT5 HCT OVA2 ATMYB111 ACLB-2 ATGH9A1 ATPPOX AT5G50000 AT5G50100 OLD5 AT5G51110 AT5G51140 ATTPPA LPA2 ATPGMP CRR1 B2 AT5G52960 AT5G52970 FTSH11 AT5G53340 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 AT5G53750 TAT7 ATOMT1 PTAC15 RPL24 THI1 VTC5 AT5G55220 ATMAP65-1 AtIAMT1 ATKCO1 AT5G56040 GATA21 LUT2 PSD2 AHA3 BIO1 CER3 ADCL APO2 NPL1 NdhN AT5G58330 AT5G58520 AT5G58540 FOLK AtcPT4 ATPDX2 CLB4 ATMYB34 COB PNM1 PDCB1 AtMYB28 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AtTudor2 AT5G62210 ATGT18 AHA11 DXR ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AT5G63700 SHA1 ALX8 PSAN ATGCH JK218 CESA6 ASN2 AT5G65220 BAM1 STR16 ATLFNR1 AT5G66470 MSP-1 ABA1 ICU2 EPS1 IRX15-L ATPA ATPF ATPH ATPI ATPE ATPB ACCD NDHD NDHE ATP6
GO:0044237 cellular metabolic process	BP	1.844e-182	LHY AT1G01080 PDH-E1 KCS1 AtFKGP encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT1G01320 ASG4 AT1G01540 ATGPAT4 PIP1;3 AT1G01630 GAE2 AT1G02110 AT1G02150 CER1 AtSAM1 ATCSLD5 LPA1 AtD27 PSAD-2 FZL AtBE2 AT1G03590 PSB27 POR ATHM1 AT1G03730 AT1G04040 KCS2 IAA3 AXR3 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT1G04420 PDLP2 LIP2 AT1G04800 TOR2 ATGTF2H2 AT1G05140 AT1G05150 AT1G05170 emb2394 LPA19 UGT1 5PTASE13 BT3 ATCTL1 AT1G05870 BBX24 ATMYB13 RHON1 FTSH8 ATGSL07 AT1G06550 HPD OE23 AtSLP1 ATF2KP ATNDI1 AT1G07280 EMB2784 SR45a ATPCNA1 AtRLP1 ATRAB-A2B AT1G07440 KCS3 ATMPK13 GATA11 AXS2 ADT6 AT1G08280 PSAO FATB ALB-1V ABC1 AVDE1 ATSYP111 AT1G08800 AtMYB60 AT1G09310 CRB AT1G09440 iPGAM1 AtHIR1 LRR ATBCAT-1 AT1G10120 ATGSTU18 ATGSTU17 ACLA-1 AT1G10740 AT1G10850 AT1G10900 EMB3103 ATFD1 AT1G11050 SCM AT1G11340 CBRLK1 AT1G11410 ATPMEPCRA ATSS3 CLPP6 ADT1 ATGLX1 AT1G11860 ATSRS Encodes a protein that appears to have 1-amino-cyclopropane-1-carboxylic acid oxidase activity based on mutant analyses. AT1G12080 ELP ATNRT1 AT1G12244 PHR1 AT1G12460 AT1G12500 AT1G12800 AFB3 ICE2 GAPA-2 AOC4 AT1G13650 AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 AT1G14200 AT1G14270 PKS2 SBH2 AT1G14345 AtMYB124 AT1G14460 AT1G14600 RHA2A PSS1 AT1G15165 AT1G15410 AT1G15530 CYCA2;3 AT1G15710 CP24 FDM1 AT1G15920 ATCCR1 NDF1 ADAP AT1G16080 CYP79F2 BUS1 ATMYB58 AT1G16680 HCF173 UP6 ACR11 SPS2 AtHBP1 FUG1 GLYR2 ATEGY3 AT1G18060 ATMPK8 AT1G18170 BEE1 AT1G18440 AT1G18460 AT1G18485 ATSOT17 AT1G18660 AtMYB47 NDF6 AT1G19140 LHCA2*1 BES1 KCS4 AT1G19490 ATDHAR1 JMT ATCLH1 AT1G19690 BEL10 AT1G19710 ARF5 APS2 TUB5 ATLFNR2 CVP1 DRT112 ASG5 AT1G20810 AT1G21060 AT1G21440 AT1G21590 ATNADK2 AT1G21670 LYM1 ATPIP5K1 AT1G22170 AGL87 AT1G22630 ATRABG3B FB AT1G22850 AT1G22910 AT1G23030 AOAT1 ATCAF2 AOR MLP423 UGT74B1 ARL1 AT1G24330 ASB1 BBX15 CER60 AtPERK10 AT1G26190 ATSOFL1 AT1G26220 Cpn60beta4 AT1G26790 AtHB23 AT1G27120 ATGSTU13 SPL11 AT1G27480 ATPUB45 AT1G28390 SRD2 ARAB-1 AT1G29070 AT1G29670 AT1G29700 AT1G29720 RKF1 AB180 AB165 AB140 AT1G29950 PDH-E1 ARF6 PSAK AAE14 AT1G30690 GlcNAc1pUT1 IMPL1 AK-HSDH PSAF FEI1 ATROPGEF14 AT1G31710 CYP97A3 ACBP AT1G31920 PRK ATNSI AT1G32160 ACT1 AT1G32220 KAN2 PKp3 NRT1.5 AT1G32470 GBSS1 PRPL11 AT1G33110 AT-GTL1 AT1G33470 AT1G33600 AT1G33700 ATSERK2 EMB3003 EMB2756 AT1G35420 AT1G35560 RPL21C ACC1 AT1G36280 SHM7 ATNR2 PMI1 expressed protein localized to the inner membrane of the chloroplast. GAPB AtcFBP ATSDC1 CYCA1;1 CP22 ATMCM2 AT1G44920 AtBGAL5 ABF2 Lhca5 5PTASE11 DYW1 mtLPD1 DGAT3 EMB3105 ACD1 RKL1 GATB AtPMEAMT AT1G49010 ACT8 AT1G49380 LACS2 AT1G49580 PUB26 AT1G49975 AT1G50120 FTSH1 AT1G50270 SCL-3 POLGAMMA2 GDC1 AT1G51080 AT1G51110 AT1G51340 4CL.1 ADOF1 AT1G51805 AT1G52220 PSAH-2 ATBG1 ATFPG-1 AT1G52510 AT1G52540 SPA4 FTM6 TCP3 mMDH1 AT1G53290 AT1G53430 ATMUM4 ATMPK18 AtFAP3 ATMSRB1 AT1G53900 ESP AT1G54050 AT1G54290 ABCD2 AT1G54410 AT1G54500 ACP2 ATATG18H AtTLP18.3 AT1G54790 AT1G54820 ANP2 ATLOX1 AtIDD7 AT1G55260 AT1G55360 NDF5 ZKT CPN60B PSAG AT1G55690 UKL3 ATCSLE1 ATSERAT2;1 AT1G55960 HAC04 AT1G56050 AT1G56190 AT1G56210 ATDI19 ATNAS4 AT1G56500 AT1G57770 ATATP-PRT1 AT1G58170 AtHEMA1 SQE1 CRR28 ARF1 CCB4 AT1G59860 AT1G60000 DHNS AT1G60590 ABC4 ATB2 AtNIK3 ACLA-2 ATRECQ4B ATFD2 AT1G61190 AT1G61300 LHCA3 AT1G61610 ATGPT2 AT1G62170 APR2 AT1G62250 ACO2 FMO KAS AT1G62660 ATSCO1 AT1G62780 NRS/ER NRPD1 AT1G63640 AT1G64355 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. LACS3 AT1G64500 AT1G64510 BDG1 AT1G64680 TUA1 NDF2 AMT1;2 RPOD1 G-TMT 4CL3 AT1G65070 AT1G65190 AT1G65220 AT1G65230 AtRLP10 ATPAO4 FMO AT1G65870 cICDH GAD2 AT1G66080 AT1G66130 ZFP4 TMK1 ATGSR2 AtMYB20 AT1G66330 RGL AT1G66430 DIN9 RBCS1A AT1G67280 ATLOX6 EMB2814 AT1G67700 ATKCR1 PSBY ATFXG1 CSK AT1G67950 ATHPR1 AtIDD14 AT1G68260 AT1G68400 CER6 PSRP3/1 AT1G68600 AT1G68810 ATSOFL2 PHYLLO AT1G68940 BIM2 FLN2 AGO7 AtTCP15 HEMB1 CMT3 NRT1.7 AT1G70000 SNL4 EMB25 AT1G70200 ATCYCD1;1 AXY4 AT1G70280 PG2 ATBCA4 AT1G70480 AT1G70550 AOAT2 ABCB26 MMZ2 JAZ9 PGM2 CRR23 AT1G70770 AT1G70985 AT1G71480 AT1G71710 AT1G71810 AT1G72230 AT1G72270 PSY1R AT1G72500 AT1G72810 EDA17 LPA3 AT1G73110 AT1G73170 AT1G73390 AT1G73450 AT1G73460 ATPIN1 AT1G73600 AT1G73655 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. ATMPK15 AtEIL3 AT1G73740 BBX16 SPPA ENO1 AT1G74070 ATSOT18 ATSOT16 ATHSP101 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. IQD31 QKY AT1G74840 NDH-O ATKAS2 RPS9 emb2184 UMAMIT5 AtGH9B7 LQY1 ATCLV1 AtVAB1 PETE1 AT1G76110 AT1G76120 AMY2 sks5 CYCB2;4 AT1G76350 AT1G76450 AtHMGR1 AT1G76570 AT1G76880 ACR3 AT1G77090 AT1G77310 TAPX LACS9 LAX3 PIP5K2 AT1G78010 AT1G78040 RAP2.4 ATTPPB ATGSTU23 ATGSTU20 ATGA2OX1 SPS1 ATSHB ATRHM1 ATTPS1 emb1473 ATGGH2 ATLUP1 AT1G78995 PSBR ECT8 APL AtkdsA1 PGK EMB1047 AT1G79630 AT1G79640 RFO1 ATNADP-ME4 CS17 AT1G80030 encodes a glycerate kinase which catalyzes the last step of photorespiration C2 cycle. AT1G80640 NIP6 AT1G80850 AT1G80870 APG2 AT2G01210 MEE65 RPI2 RGA CRR3 ARR14 AT2G01820 AHK4 PQL3 BRL2 AtIDD5 STI AT2G02780 ATEXP15 AT2G03390 AT2G03420 AT2G03750 AT2G04039 RNE LACS8 AT2G04700 FLA7 EMB2761 LHCB2 LHCB2 PGR5 AT2G05920 ENR1 AtOPR3 PSBX EXGT-A1 AT2G07170 AT2G07689 AGT AT2G13440 AtXYP2 MCM9 AKN1 AGP9 AT2G14910 AT2G15020 ARFB1A ATHNIR OTP51 KCS9 MCM4 ADC1 AT2G16750 AT2G17972 ATBZIP2 AtPPa2 AT2G18630 SCY1 HY3 ATHMA4 AT2G19940 ATCLASP PSAE-2 ALE2 AAS AT2G20550 ATGLK1 ALF1 LIP1 AtERF53 PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 AT2G21380 AT2G21385 ATRL2 AT2G21960 SEP2 CSI1 PLAT2 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT2G22230 ATIPS2 AAT AT2G22360 AGL22 IAA8 SCPL8 AT2G23070 DEAR3 AT2G23360 AT2G23390 NAPRT2 ATMES7 ACL ATMES3 YCF37 AT2G23690 BLH4 AT2G23950 AT2G24020 AT2G24060 PRPL35 PDE319 AT2G24170 AT2G24230 ALDH11A3 AT2G24280 ATRPA2 AFR AT2G24580 ATGPX1 AT2G25530 AtDBP1 AT2G25800 ESE2 AT2G25830 OVA4 AT2G25870 AtGLDP2 AT2G26100 ATHSFA2 CYP711A1 FDH ER AT2G26500 ATDUF3 HO2 KCS11 AT2G26730 AT2G26800 ATCDPMEK AGO4 AT2G27060 LHW AT2G27290 ATNLP1 AT2G27680 ADT3 CH-CPN60A ATFUC1 AT2G28200 DRB2 RAP2.7 AT2G28590 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 ALB3 ADCS AT2G29180 ATGSTU6 AT103-1A TUB7 PY ANTR1 ATVLN1 AtFAD3 PBCP EMB3147 AT2G30320 ATFC-II ATC4H PSBW CYP71A13 ATCOQ3 FTSH2 ASKdZeta AT2G31040 TCP10 ATERF15 BBX25 ATNTH1 AT2G31670 UGT74D1 AT2G31790 ATMYO5 ATGSL03 BAM6 ARASP MAPKKK17 AT2G32640 ATCB5-B ATCOP1 AtPFA-DSP2 ATSUVH2 AtCLO3 PRPL28 AT2G33550 AtCRL2 ATUBC24 EMB3113 LHB1B2 AT2G34460 AT2G34590 ABR ABCC2 ATHB-14 ATFAH1 EDA3 AT2G35050 AT2G35260 GDCH AT2G35390 AT2G35410 SKL2 FEI2 AT2G35640 ATCSLA07 ATERF38 AT2G35760 AT2G35840 AT2G35880 BLH1 NHL12 ATE2FA AT2G36145 AT2G36200 AT2G36350 DML1 AT2G36570 AT2G36630 GAMMA-TIP AtXTH32 MAT3 AT2G36950 ATSIG6 ATPAL1 AT2G37050 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 UMAMIT13 UMAMIT12 AS1 AT2G37660 CAC3 PSRP4 PDX1L4 ATPDX1.1 ATSCAR2 RDO2 GAUT7 ATMVD1 PIP2;6 NATA1 ATMTP11 PnsL1 RCA CYT1 ATISA1 LHCB4.3 AT2G40260 AT2G40400 HEME2 ATKT2 ETG1 CYP98A3 AT2G41050 AT2G41060 AT2G41130 ATCBK3 SSL2 ARR8 NTRC ATVLN2 AT2G41820 AGK1 AT2G41890 AT2G42130 AtSPL9 AT2G42220 ATBZIP34 AT2G42510 ATPPC2 AT2G42690 AT2G42750 ATMPK20 ATPAO2 AT2G43030 ATLEUD1 BIO2 AT2G43500 Encodes a defensin-like (DEFL) family protein. AT2G43560 AT2G43590 FAB2 ACS1 AT2G43760 5PTase12 ATHOL1 AT2G43945 MTHFR2 AT2G44230 BGLU26 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT2G44970 AT2G45180 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis AT2G45340 BEN1 ATPEX16 AT2G45870 ASK20 ATHH2 CYP86A8 AT2G45990 KPHMT1 AtSLD2 AT2G46250 SPA1 AtGH3.11 ARF11 AT2G46810 PSAP PIL1 PTI1-4 SPL1 ATDUF5 CER8 AT2G47440 CAO ATMYB12 PHR2 AT2G47780 AtTic20-II CRR6 DEG2 RPH1 AT3G01060 AtCGS1 AtSS2 ATCFM2 PnsL3 ATHB-1 ATCYP38 AT3G01490 ATBCA1 AT3G01810 AK3 ATKT4 ATRGP1 AT3G02250 RAD23-3 ATF1 AT3G02750 AT3G02820 PNT1 ATGSTF11 AtUGP1 NPC3 PDE326 AT3G03770 ATMS2 APK3 SDG31 IAA16 EMB3119 PDE181 ATWNK1 ATCYSD1 ATN RALFL22 Encodes a defensin-like (DEFL) family protein. AIF1 ATSK12 AT3G05900 AT3G06180 EMB3004 AT3G06410 ACLB-1 GATA15 AT3G06980 AT3G07270 ATCSLC06 ATPUB9 AT3G08030 AT3G08600 AT3G08660 AT3G08680 ATPK1 LHCB4.2 AT3G09050 ATHY2 PTAC13 Fes1A AT3G09440 AT3G09540 AT3G09580 CRM3 AT3G09730 ADK1 PIP5K9 OMR1 AT3G10060 ATDFC AtLCY GYRB1 PAL4 SPD1 AHB2 ABCI6 AT3G10840 LSF2 AtFAD7 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 ATHST AT3G12050 emb2738 ACT11 AT3G12210 ATHSP70 AGC1.5 PGK1 AT3G12930 AT3G13000 AT3G13040 ATSERAT2;2 AT3G13120 AT3G13180 AT3G13226 Cpn60beta2 ATKRS-2 AT3G13510 PUT4 AT3G13740 BGAL1 AT3G14067 FLU AT3G14200 AT3G14205 ESM1 ATPME3 AT3G14330 SRF7 GOX2 GOX1 ATGSL04 ATMPK19 ATRHM3 AT3G14890 HEME1 IDM1 MEE35 HCF243 PRPS20 SPL5 SPA3 ATHM4 AT3G15520 AT3G15550 AT3G15570 ADS3 MFP1 PSAH-1 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. EMB2083 ABCG29 AT3G16350 AT3G16370 JAL35 ATKINESIN-13A ATEBP AT3G16850 AAE7 LPD1 HCF107 ECT6 POK1 MAT4 ATCRSH CIPK1 HYH ATACP5 RLK902 NMT1 WOX1 NRPD2B EMB1270 EMB1865 AT3G18500 ATPUB29 ATWNK6 ACT2 AT3G18870 AtTic62 AT3G19000 ATPREP1 PUB25 ATCAD4 AT3G19480 IKU2 BCAT4 CBB1 AT3G19850 AT3G20230 AT3G20390 POLGAMMA1 AT3G20680 PSBTN AtBBX32 GluTRBP 4CL5 4CL2 GLTP3 ADOF2 UGT84A2 CYCP2;1 AT3G22150 ATWNK2 AT3G22520 ATTSO1 NET1A ELIP APS1 PKP-ALPHA ATSR2 ATCFM3A AT3G23090 bHLH34 AT3G23310 ATPHO1 AT3G23700 ATSAHH2 GAE6 ATTOPII AT3G23930 AT3G24190 HCF101 ALDH1A AT-HSFC1 PLSP1 AT3G24715 ICK3 GAUT8 ATFKBP62 ATGHBDH AtNIK2 AT3G25570 AAPT2 AT3G25660 AtCHUP1 AOC1 AOC2 AT3G25805 LTA2 RPL15 ATPRX AT3G26450 GAMMA-TIP2 ORF02 GAPA ATSNM1 AT3G26700 CCB1 ATICE1 ATSKL1 DRB3 ATTSO2 GHS1 LHCB2 ATMDAR4 RPL12 RPL12-C AT3G28040 UMAMIT47 AT3G28460 AT3G29185 ATCM1 AT3G42660 CHR38 AAO2 LTPG2 ATGSTU27 ATJ ATNIT1 AT3G44620 AtKIN14h RPL9 AtXTH31 AT3G45160 JK224 AT3G45900 ATMYB48 AT3G46370 PTAC16 DUT1 AT3G47070 PEX11B ATSMC2 CAB4 AT3G47580 PYE AT3G47650 PUB39 AT3G47830 ATATM AT3G48200 AT3G48420 AT3G48460 AHAS DCF GSA2 AT3G49000 AT3G49220 BAM2 ATBCAT-3 AT3G49810 ARLA1C OBP1 CRK ICK2 AT3G50685 BEH1 OEC33 AtHB28 SRS1 GATA6 AT3G51090 AT3G51140 GMD2 AT3G51280 ATSSL4 AT3G51510 LTP5 ATWNK5 IMK2 ATG4 AT3G51950 PSRP2 CP33 AT3G52500 ACA1 FTSZ2-2 BGAL2 KIPK ELL1 AT3G52960 CYP97C1 ATPAL2 AT3G53380 AtPIP2;1 AtPPa4 AT3G53680 PYRR HCEF1 ATPTR1 AT3G54210 TBL36 AT3G54290 AT3G54390 AT3G54400 ATGR2 SETH3 LHCA1 ATGRXCP PLA PGPS2 GSTL2 A11 PDE329 PPL1 ATTSC13 OVA1 P5CS2 ATDFD SBPASE ESK1 AT3G56010 UGP3 IMK3 AT3G56290 AT3G56370 PPD6 AT3G56680 AT3G56760 AT3G56870 PSRP5 ACSF AT3G57020 AT3G57030 AT3G57060 AT3G57070 BPG2 PrfB3 AGL16 AT3G57400 ATVLN3 AT3G57800 AT3G57830 SPL15 GIS ATWRKY69 IPMI1 AT3G59040 PIF5 GUN4 ACR4 AT3G59780 MTHFR1 AT3G60320 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. HAT3 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. CDS5 AT3G60750 MAP65-4 AT3G61080 GAUT1 HD-GL2-1 ATPIP1 ARATH;BSAS3;1 LHCA2 AtSLD1 ATX3 AT3G61870 CYP20-3 CP12 AT3G62570 ATMYB11 APG3 ATIPT3 CYCP1;1 CSP41A OEP6 AtFAP1 AtcpRRF ATMRK1 AT3G63340 OTP86 APG1 EMB3126 AT3G63510 ATCCD1 BB Conceptual translation of this open reading frame gave the sequence of a 229-residue hypothetical protein that contains the same sequence as the mature A. thaliana chloroplast luminal 19-kDa protein linked to a putative signal sequence. BRCA2(IV) UNE10 AT4G00165 YAB3 EDA8 RLK4 ATT1 ANTR2 FDM2 AtGPAT8 AT4G00560 NAD-ME2 ASKTHETA AHDP AT4G00870 AT4G00895 MEE47 CRK41 TROL GT72B1 MGP4 AT4G01310 AT4G01460 ABC1 HEMG1 AGY1 AtSAM2 ATGPAT3 MCM7 AT-RSH1 AT4G02410 ATXT2 AT4G02530 AT4G02630 EOL1 PSAD-1 EMB3129 AtRBP-DR1 AFB1 XTH9 AT4G03260 PETC AT4G04340 EMB2369 APR ATPC1 CPK27 ATKEA3 PDF2 AT4G05090 AtMYB74 PSBQ ATK5 Encodes a putative glycosyl hydrolase family 10 protein (xylanase). AT4G08280 ORL1 ARGAH2 APX4 AT4G09040 CRRJ A/N-InvI AT4G09630 ATPD AT4G10060 ATSPS4F ATDET1 AT4G10300 LHCB5 AT4G10390 AT4G11100 SPA2 AT4G11175 ATMPK5 AT4G11570 BASS5 Hop3 SKU5 FLA2 PSAL AT4G12830 EPFL9 AT4G13050 SDG22 AT4G13540 CYP83A1 AT4G13840 SHM4 ATSAHH1 SBP1 KINESIN-12A PDE226 AT4G14330 AT4G14360 bHLH104 ATECI3 NF-YB3 CIPK4 APS3 ELIP2 ATTCX2 TUA6 CYP97B3 ATCCT2 AT-BETA-AMY AT4G15430 PPD1 AT4G15545 IAGLU AtCLA1 AT4G16141 AT4G16155 PHYD SPK1 AT4G16980 CLPR4 AtBAM3 ATRAB1C AT4G17560 LIL3:1 AT4G17650 AT4G17740 ATTPS5 AT4G17810 MYC4 APRR2 AT4G18030 PHYE ATSS4 DEG5 TCP2 CH-42 ATWL4 AT4G18740 AT4G18810 AT4G18820 CMT2 AT4G19460 Encodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death. AK-HSDH AAH PTAC14 BAM3 ATRAB8D AT4G20760 ATFAH2 GHR1 PyrD AT4G21060 ATRP1 PSBQ B120 ATM4 ATML1 AT4G21770 ATTOM1 PRXR1 APR3 AKT2 AT4G22290 CYP706A2 AT4G22730 ATSMO1-2 PGR5-LIKE CRK21 CRK22 PIP1;5 AT4G23670 AT4G23740 CRF2 CRR31 ATCSLG3 ATCSLG1 cpHsc70-1 AT4G24350 CER2 AGL24 PGI ATHB22 TAR2 AT4G24750 ATRBP31 AT4G24790 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) AT4G24930 ATHVA22D AT4G25030 ACP4 CHLM MSRA4 OTP70 AT4G25280 AT4G25290 B1 AT4G25830 CGA1 AtFBA7 AtFBA5 AT4G26540 AT4G26555 AGC1-2 AtWRKY20 GDPDL3 AT4G26710 MAP65-2 VTC2 AT4G26860 AT4G26940 FAD4 AT4G27130 ATK2 AT4G27240 AT4G27300 CIP7 AT4G27435 AtENODL2 AT4G27560 NARA5 AT4G28080 AT4G28180 AT4G28360 AT4G28480 PSB28 AT4G28740 PSAE-1 AT4G28780 emb2726 IAA27 AT4G29100 AT4G29120 PFK1 AT4G30020 AT4G30180 AHA2 VEL1 AR2 GAE1 AT4G30470 SARK GGP1 PDE327 ASHR3 FAD6 ATCIPK6 AT4G31310 ACDO1 HCF153 EMB2797 PGR3 ATGPX7 AT4G32000 PDE334 AT4G32330 AtCESA1 LUG AT4G32590 ATSDX1 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHB-8 ATH1 AtGLDP1 AT4G33080 FAB1A ATHDA14 AT4G33500 AtHMAC6 KUP5 AT4G33560 ATBCA5 AT4G33740 AT4G33760 ATOST1 CCoAOMT1 AT4G34090 SEP1 AT4G34220 ALDH3 CLB6 BLH6 SSR16 ERG9 SQS2 AT4G34730 ASE2 MRL1 AT4G34920 SLP2 AtMYB32 CAT2 HCF244 AT4G35270 XCP1 AFT MCA1 AT4G36180 CYP84A1 GATA7 ALDH3F1 BGAL3 AT4G36390 AT4G36530 BEE2 ATRL3 AtPLT6 AtGGPPS11 BLH2 ACD2 CYP81F3 ANT SQE3 XTH7 SHM1 ATCAD6 ATCAD7 pde191 AQI AtVAB2 AT4G38520 ATMYB4 AT4G38690 ROC1 ATPRP4 AtFBA2 AT4G39040 VHA-A3 SHL1 AT4G39150 ATSEC14 APL3 ATCAD9 ATCESA2 SAMC1 ATSK2 AT4G39630 FKBP16-2 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. ATIPS1 AKN2 CYP79B2 AT4G39960 AT4G39970 DHS1 AT5G01020 LAC8 AT5G01090 SQD2 AT5G01260 ATPDX1 AIRP2 LHCB4.1 AT5G01590 AT5G01890 STN8 OHP AT5G02160 ATMTRNASEII AT5G02370 PLL2 AT5G02460 AT-HSC70-1 AT5G02710 AT5G02940 AT5G03140 ATRAB AtNCS1 SBE2.2 AT5G03870 AT5G03880 54CP GYRB2 FD-GOGAT ATPAL3 ATLDA BTR1 KCS19 SIR ACR12 ATOFP13 NOL ATNAS1 AT5G04980 RUL1 ATCESA3 AT5G05180 AtCHIL AtFAD8 ATEGY2 AT5G05790 UGT76C2 ATROPGEF5 2-Cys ATNUDX27 TBR HAT14 AT5G07020 ERL2 ATMSRA2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ATMYB29 AT5G07800 AT5G08050 TCP17 BIM1 ATAIH AT5G08390 FTRA2 AT5G08415 AT5G08430 PDE340 AT5G08650 NDC1 AtSRT2 PI-4KBETA2 AtPPa6 PMDH2 CESA5 PROPEP5 AT5G10020 ATMIPS3 AST68 ASN3 PAS2 AIL6 AT5G10605 AT5G10690 CIPK5 AT5G10960 AT5G10970 ATSPS2F HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 TINY2 ATNADP-ME2 AT5G12110 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 DiT1 AT5G12970 ATGSL12 ATCYP20-2 AT5G13140 CRN AT5G13410 EMB3136 ABAR SVR3 SIG4 CCS52B ATCHS AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 AT5G14210 EMB3137 AT5G14410 AT5G14460 AT5G14500 ATSK13 ATDEF2 AT5G14700 BETA AO AT5G14910 AT5G14970 AT5G15070 GASA4 AtENODL17 AT5G15390 GAUT14 BCCP2 AtbZIP3 AT5G15910 AT5G15950 AtNIK1 AT5G16240 VAT1 BCCP LRR1 AtMYB43 DHAR3 EMB2247 AT5G16720 AT5G16810 ENH1 PSY AtUGP2 MEX1 AT5G17660 AT5G17670 EMB1241 PSRP6 ATCIMS AT5G18140 anac088 ATSRA1 AT5G18500 AT5G18550 ATOBGC AT5G18600 PCB2 BAM9 EMB3013 NSH3 BUD2 ADG2 AT5G19290 ATOEP80 AT5G19760 AtRbcX2 AT5G19940 AT5G20050 AtHBP5 ATMGD2 ATBRXL4 ATCPN21 CRR42 AT5G21100 AT5G21105 AT5G21222 CIPK26 ATCKX5 ATHMA8 AT5G22020 UBP8 anac089 AT5G22340 IMS3 CaS HCF136 AT5G23170 AT5G23280 HMGB6 AT5G23480 AT5G23820 TUB8 AT5G24010 SLAH3 ATSIG5 SQE5 ATSS1 AT5G24320 PGL5 LSU2 CRY3 AT5G25590 AtYUC6 BGLU37 AtTGG1 AT5G26330 PYR6 AT5G27560 ATCYSD2 DES1 ATNEK3 AT5G28300 AT5G28500 GME ARRPS1 AT5G34930 AT5G35170 AMOS1 CAC2 ATGSL1 AHK2 AT5G35970 atylmg3 AT5G36160 ATPRFB AT5G36230 CAT3 AT5G37010 ARF8 ARLA1A AT5G37790 RBCS3B AT5G38520 CRR7 UDG4 ORTH1 DEG8 AT5G40140 CRK42 RS5 AT5G40500 GPDHp RPL27 DRB5 ATUBC8 AT5G41760 AT5G42070 FTSH5 AOS ATIPK1 AT5G43150 SPL2 TZP NDH18 KCS20 AT5G44020 ATGLK2 TUB4 AT5G44520 MCM6 AT5G45170 AT5G45290 ATFKBP13 AT5G45720 CIPK20 CHL AtNUDT11 AT5G45950 APE2 AtLARP6a KAS1 AT5G46390 AT5G46420 BSK2 AT5G46580 bHLH071 TET1 PYL1 ATNIG1 AT5G46910 Encodes the mitochondrial ATP synthase subunit delta. LON2 LIL3:2 AT5G47190 AT5G47390 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT5G47620 NF-YB2 FPS1 FRA1 AMK2 ATRBOHD AT5G48220 AACT2 ADG1 AT5G48360 HINT3 ATFKBP65 AT5G48590 ATCAP-C AT5G48790 KAT5 LPA66 HCT OVA2 DDM2 ATMYB111 ACLB-2 XIP1 ATGH9A1 cpHsc70-2 ATPPOX AT5G50000 AT5G50100 AT5G50110 AT5G50180 OLD5 AT5G50370 CAA33 AT5G51110 AT5G51140 ATTPPA LPA2 AT5G51560 At-NEET ATPGMP AT5G52010 CRR1 CCB2 SCL8 B2 ATHS83 AT5G52660 AT5G52780 ATWRKY27 AT5G52960 AT5G52970 AT5G53140 FTSH11 AT5G53340 ORG1 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 AT5G53750 AtPSKR2 TAT7 ATOMT1 PTAC15 LHCB3 AHL CRLK1 RPL24 THI1 VTC5 AT5G55220 ATMAP65-1 AtIAMT1 GDPDL4 CRR21 AT5G55950 AtHsp90-3 AtHsp90.2 AT5G56040 ATPEX5 ILL1 AT5G56790 AT5G56840 AT5G56850 GATA21 AT5G56890 NAP1;3 LUT2 CIA2 PSD2 AHA3 BIO1 AT5G57610 CER3 ADCL APO2 NPL1 AT5G58150 NdhN AT5G58330 AT5G58520 AT5G58540 EOL2 FOLK DDB2 AtcPT4 ftsh9 AT5G58950 AT5G59250 ATUXS3 AT5G59610 AtVIP2 AT5G60270 LecRK-I.9 ARF4 ATPDX2 CLB4 ATMYB34 COB PNM1 PDCB1 PIF7 AT5G61350 AtMYB28 AT5G61570 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AtTudor2 ARF1-BP AT5G62210 ATGT18 AT5G62350 CDF1 AHA11 AT5G62710 DXR AT5G62840 BT1 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AT5G63410 SNRK2-5 AT5G63700 AT5G63710 SHA1 AT5G63940 ALX8 PSAN DCT ATGCH JK218 EMB3144 CESA6 ASN2 ATPUB38 AT5G65220 ATHB-5 KAC2 BAM1 XTH6 STR16 ATLFNR1 AT5G66230 AT5G66470 AT5G66520 MSP-1 ENY AT5G66770 ABA1 ICU2 EPS1 TOE3 AT5G67200 IRX15-L ATEB1C RLK ARA12 PSBA MATK RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 RPS14 PSAB PSAA YCF3 RPS4 NDHJ PSBG NDHC ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBF PSBE ORF31 PETG PSAJ RPS18 RPL20 CLPP1 PSBB PSBT PSBN PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 RPL2.1 RPL23 NDHB.1 RPS7 NDHF YCF5 NDHD NDHE NDHG NDHI NDHA NDHH RPS15 RPS7.2 NDHB.2 RPL23.2 RPL2.2 NAD9 RPL16 ATP6 NAD5 COX3
GO:0009987 cellular process	BP	1.465e-181	LHY AT1G01080 PDH-E1 KCS1 AtFKGP encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT1G01300 AT1G01320 PYL9 ASG4 AT1G01540 ATGPAT4 PIP1;3 AT1G01630 ATKEA1 GAE2 AT1G02110 AT1G02150 CER1 AtSAM1 ATCSLD5 LPA1 AT1G03020 AtD27 NET1D PSAD-2 FZL AtBE2 AT1G03440 AT1G03590 PSB27 POR ATHM1 AT1G03730 AT1G04040 ABCC5 ATXIB KCS2 IAA3 AXR3 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT1G04420 AT1G04430 PDLP2 LIP2 AT1G04680 AT1G04800 TOR2 ATGTF2H2 AT1G05140 AT1G05150 AT1G05170 emb2394 ATGLR3.4 LPA19 UGT1 5PTASE13 BT3 ATCTL1 AT1G05870 BBX24 ATMYB13 RHON1 FTSH8 ATGSL07 AT1G06550 HPD OE23 AT1G06830 AtSLP1 ATF2KP ATNDI1 AT1G07280 EMB2784 SR45a ATPCNA1 AtRLP1 ATRAB-A2B AT1G07440 KCS3 ATMPK13 GATA11 AXS2 ADT6 AT1G08280 PSAO FATB ALB-1V ABC1 AVDE1 ATSYP111 ACHT4 AT1G08800 AtMYB60 ATCAX11 AT1G09200 AT1G09310 CRB AT1G09440 iPGAM1 AtHIR1 LRR ATBCAT-1 AT1G10120 ATGSTU18 ATGSTU17 ACLA-1 AT1G10740 AT1G10850 AT1G10900 EMB3103 ATFD1 AT1G11050 SCM AT1G11340 CBRLK1 AT1G11410 ATPMEPCRA ATSS3 CLPP6 ADT1 ATGLX1 AT1G11860 ATSRS Encodes a protein that appears to have 1-amino-cyclopropane-1-carboxylic acid oxidase activity based on mutant analyses. AT1G12080 ELP ATNRT1 ATBETAFRUCT4 AT1G12244 PHR1 ARK3 AT1G12460 AT1G12500 AT1G12800 AFB3 ICE2 GAPA-2 AOC4 Encodes protein phosphatase 2A (PP2A) B'theta subunit. Targeted to peroxisomes. AT1G13650 AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 AT1G14200 AT1G14270 PKS2 SBH2 AT1G14345 AtMYB124 AT1G14460 AT1G14600 ADL1C ATMAP70-4 RHA2A PSS1 AT1G15160 AT1G15165 AT1G15180 AT1G15410 AT1G15530 CYCA2;3 AtAVP1 AT1G15710 CP24 FDM1 AT1G15920 ATCCR1 ATNRAMP6 NDF1 ADAP AT1G16080 CYCB3;1 ATOCT3 CYP79F2 BUS1 ATMYB58 AT1G16680 HCF173 UP6 ACR11 SPS2 AtHBP1 AT1G17200 FUG1 GLYR2 ATEGY3 AT1G18060 ATMPK8 AT1G18170 AT1G18360 BEE1 AT1G18440 AT1G18460 AT1G18485 ATSOT17 AT1G18660 AtMYB47 NDF6 NRT1.9 AT1G19140 LHCA2*1 BES1 KCS4 AT1G19450 AT1G19490 ATDHAR1 JMT ATCLH1 AT1G19690 BEL10 AT1G19710 ARF5 APS2 TUB5 ATLFNR2 ARAC4 ATEXP11 CVP1 DRT112 ASG5 AT1G20810 MCD1 XCP2 AT1G21060 AT1G21350 AT1G21440 AT1G21590 AT1G21630 ATNADK2 AT1G21670 LYM1 ATPIP5K1 AT1G22170 AGL87 AT1G22630 ATRABG3B FB AT1G22850 AT1G22910 AT1G23030 AT1G23200 AT1G23220 AOAT1 ATCAF2 AOR MLP423 UGT74B1 ARL1 AT1G24330 ASB1 BBX15 CER60 AtPERK10 AT1G26190 ATSOFL1 AT1G26220 Cpn60beta4 AT1G26250 AT-EXP10 AT1G26790 AtHB23 AT1G27120 ATGSTU13 LCR SPL11 AT1G27480 ATPUB45 MAP65-8 ABCB13 ABCB14 AtRLP4 AT1G28390 SRD2 ARAB-1 AT1G29070 ATSCAR3 AT1G29670 AT1G29700 AT1G29720 RKF1 AT1G29820 AB180 AB165 AB140 AT1G29950 PDH-E1 ARF6 PSAK AAE14 AT1G30690 GlcNAc1pUT1 IMPL1 AK-HSDH PSAF FEI1 ATROPGEF14 AT1G31710 CYP97A3 ACBP AT1G31920 PRK ATNSI AtLrgB AT1G32160 ACT1 AT1G32220 KAN2 PKp3 NRT1.5 AT1G32470 GBSS1 PRPL11 AT1G33080 AT1G33110 AT-GTL1 AT1G33470 AT1G33600 AT1G33700 SAMC2 ATSERK2 EMB3003 EMB2756 AT1G35420 AT1G35560 RPL21C ACC1 AT1G36280 SHM7 ATNR2 SKS6 PMI1 expressed protein localized to the inner membrane of the chloroplast. GAPB AtcFBP ATSDC1 AT1G44000 CYCA1;1 CP22 ATMCM2 AT1G44920 AtBGAL5 ABF2 Lhca5 AT1G45688 5PTASE11 AT1G47530 DYW1 mtLPD1 AT1G48090 DGAT3 EMB3105 ACD1 RKL1 GATB AtPMEAMT AT1G49010 ACT8 AT1G49380 LACS2 AT1G49580 AtCXE5 AT1G49740 PUB26 AT1G49975 TUA2 AT1G50120 FTSH1 AT1G50270 ATHX SCL-3 ATHKL1 AT1G50660 POLGAMMA2 GDC1 HTA10 AT1G51080 AT1G51110 AT1G51200 AT1G51340 4CL.1 ATB ADOF1 AT1G51805 AT1G52220 PSAH-2 ATROPGEF11 ATBG1 ATFPG-1 AT1G52510 AT1G52540 SPA4 FTM6 TCP3 mMDH1 AT1G53290 TTL1 AT1G53430 ATMUM4 ATMPK18 AtFAP3 ATMSRB1 ATPME1 AT1G53900 ESP AT1G54050 AT1G54290 ABCD2 AT1G54410 AT1G54500 ACP2 ATATG18H AtTLP18.3 AT1G54790 AT1G54820 ANP2 ATLOX1 AtIDD7 AT1G55260 ATDEK1 AT1G55360 NDF5 ZKT CPN60B AT1G55550 PSAG AT1G55690 UKL3 ATCSLE1 ATSERAT2;1 AT1G55960 HAC04 AT1G56050 AT1G56190 AT1G56210 ATDI19 ATNAS4 AT1G56500 SVB AT1G57770 ATATP-PRT1 AT1G58170 AtHEMA1 SQE1 CRR28 ARF1 CCB4 AT1G59860 AT1G60000 DHNS AT1G60590 ABC4 ATB2 AtNIK3 ACLA-2 ATRECQ4B ATFD2 AT1G61190 AT1G61300 LHCA3 AT1G61610 AT1G61660 AT1G61740 ATGPT2 AT1G62170 APR2 AT1G62250 ACO2 FMO KAS AT1G62660 ATSCO1 AT1G62780 NRS/ER AT1G63010 NRPD1 AT1G63640 AT1G64150 AT1G64355 AT1G64370 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. LACS3 AT1G64500 AT1G64510 BDG1 AT1G64680 TUA1 NDF2 AMT1;2 RPOD1 G-TMT CDI Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication). 4CL3 AT1G65070 AT1G65190 AT1G65220 AT1G65230 PTAC4 AtRLP10 ATPP2-A5 ATPAO4 FMO AT1G65870 cICDH GAD2 AT1G66080 AT1G66130 ZFP4 TMK1 ATGSR2 AtMYB20 AT1G66330 RGL AT1G66430 PMI2 DIN9 RBCS1A CRWN1 AT1G67280 ATLOX6 EMB2814 AT1G67700 ATKCR1 PSBY ATFXG1 CSK AT1G67870 AT1G67950 ATHPR1 AT1G68110 AtIDD14 AT1G68260 AT1G68400 CER6 PSRP3/1 AT1G68600 AT1G68780 CLE12 AT1G68810 ATSOFL2 PHYLLO AT1G68940 BIM2 FLN2 AT1G69420 AGO7 AT-EXP1 AtTCP15 HEMB1 CMT3 NRT1.7 AT1G70000 SNL4 EMB25 AT1G70200 ATCYCD1;1 AXY4 AT1G70280 PG2 ATBCA4 AT1G70480 AT1G70550 AOAT2 ABCB26 MMZ2 JAZ9 PGM2 CRR23 AT1G70770 MLP43 AT1G70985 FAB1C AT1G71140 AT1G71480 AT1G71710 AtCPB AT1G71810 AT1G72230 AT1G72270 PSY1R AT1G72500 ATGER1 AT1G72810 AT1G72840 EDA17 LPA3 AT1G73110 AT1G73170 AT1G73390 AT1G73450 AT1G73460 ATPIN1 AT1G73600 AT1G73655 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. ATMPK15 AtEIL3 AT1G73740 BBX16 SPPA ENO1 AT1G74070 ATSOT18 ATSOT16 ATHSP101 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. IQD31 QKY AT1G74730 AT1G74840 NDH-O ATKAS2 RPS9 emb2184 UMAMIT5 AtGH9B7 LQY1 ATCLV1 AtVAB1 ATCDSP32 PETE1 AT1G76110 AT1G76120 AMY2 sks5 CYCB2;4 AT1G76350 AT1G76450 AtHMGR1 AT1G76570 AT1G76670 AT1G76800 AT1G76880 ACR3 AT1G77090 PIN6 AT1G77310 TAPX LACS9 LAX3 PIP5K2 AT1G78010 AT1G78040 RAP2.4 ATTPPB AUF1 AT1G78180 ATGSTU23 ATGSTU20 ATGA2OX1 SPS1 ATSHB ATRHM1 ATTPS1 MSL6 emb1473 ATGGH2 ATLUP1 AT1G78995 PSBR ECT8 APL AtkdsA1 PGK EMB1047 AT1G79630 AT1G79640 RFO1 ATNADP-ME4 SGB1 CS17 AT1G80030 AAA1 encodes a glycerate kinase which catalyzes the last step of photorespiration C2 cycle. AT1G80640 NIP6 AT1G80850 AT1G80870 APG2 AT2G01210 MEE65 RPI2 RGA CRR3 ARR14 AT2G01820 AHK4 ATMAP65-6 PQL3 BRL2 AtIDD5 STI AT2G02780 ATEXP15 AT2G03390 AT2G03420 AT2G03750 AT2G04039 RNE AT2G04280 LACS8 AT2G04700 FLA7 EMB2761 LHCB2 LHCB2 PGR5 AT2G05790 AT2G05920 ENR1 AtOPR3 PSBX EXGT-A1 AT2G07170 ABCC13 AT2G07689 AT2G11910 AGT AT2G13440 AtXYP2 MCM9 AKN1 AGP9 AT2G14910 AT2G15020 AtTic21 ARFB1A AT2G15320 ATHNIR OTP51 KCS9 MCM4 ADC1 AT2G16750 ATGLR2 ARAC1 AT2G17972 ATBZIP2 AtPPa2 AT2G18630 SCY1 HY3 ATHMA4 AT2G19650 AT2G19780 AT2G19940 ATCLASP PSAE-2 ATXIG ALE2 AAS AT2G20550 ATGLK1 ALF1 LIP1 AtERF53 PSB29 ATPRP2 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA AT2G21300 BBX18 AtFBA1 AT2G21340 AT2G21380 AT2G21385 AT2G21560 ATRL2 AT2G21830 AT2G21960 SEP2 CSI1 PLAT2 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT2G22230 ATIPS2 AAT AT2G22360 AGL22 IAA8 SCPL8 AT2G23070 DEAR3 AT2G23360 AT2G23390 NAPRT2 ATXLG1 ATMES7 ACL ATMES3 YCF37 AT2G23690 BLH4 AT2G23950 AT2G24020 AT2G24060 PRPL35 PDE319 AT2G24170 AT2G24230 ALDH11A3 AT2G24280 ATRPA2 AFR AT2G24580 ATGPX1 AT2G25270 AT2G25430 AT2G25530 AtDBP1 AT2G25800 ESE2 AT2G25830 OVA4 AT2G25870 PDF1.2b AtGLDP2 AT2G26100 ATHSFA2 CYP711A1 FDH ER AT2G26500 AR781 ATDUF3 HO2 WEB1 KCS11 AT2G26690 AT2G26730 SCAB1 AT2G26800 ABCG32 ATCDPMEK AGO4 AT2G27060 LHW AT2G27290 ATNLP1 AT2G27680 ATNAT12 ADT3 CH-CPN60A ATFUC1 AT2G28200 AT2G28320 DRB2 RAP2.7 AT2G28590 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 HIS4 ALB3 ADCS ATEXP6 AT2G29180 ATMTPB1 ATGSTU6 AT103-1A TUB7 PY ANTR1 ATVLN1 AtFAD3 ATZIP6 PBCP EMB3147 AT2G30320 ATFC-II KIS ATC4H PSBW CYP71A13 ATCOQ3 FTSH2 ASKdZeta AT2G31040 TCP10 ATERF15 BBX25 ATNTH1 AT2G31670 UGT74D1 AT2G31790 ATMYO5 ATGSL03 BAM6 ATGLR3.7 ARASP MAPKKK17 AT2G32640 ATCB5-B ATCOP1 AtPFA-DSP2 ATXID ATSUVH2 PDLP3 AtCLO3 PRPL28 AT2G33550 GALS1 AtCRL2 ATUBC24 EMB3113 ATRANGAP2 RWA3 LHB1B2 AT2G34460 AT2G34590 ABR ABCC2 AIR9 ATHB-14 ATFAH1 EDA3 AT2G34930 AT2G35050 AT2G35260 GDCH AT2G35390 AT2G35410 SKL2 FEI2 AT2G35640 ATCSLA07 ATERF38 AT2G35760 SAMTL AT2G35840 AT2G35880 BLH1 NHL12 ATE2FA AT2G36145 AT2G36200 ATFTSZ2-1 AT2G36350 DML1 AT2G36570 AT2G36630 GAMMA-TIP AtXTH32 MAT3 ABCB1 AT2G36950 ATSIG6 ATPAL1 AT2G37050 PIP2;2 PIP2;3 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 ABCG33 UMAMIT13 UMAMIT12 AT2G37540 AS1 ATEXP3 AT2G37660 CAC3 AtAUX1 PSRP4 PDX1L4 ATPDX1.1 PYL4 ATSCAR2 cdf3 RDO2 GAUT7 ATMVD1 MAP65-5 ATPT2 PIP2;6 NATA1 ATMTP11 PnsL1 ATEXP4 RCA CYT1 ATISA1 LHCB4.3 AT2G40260 AT2G40400 HEME2 ATKT2 ETG1 CYP98A3 AT2G41050 AT2G41060 AT2G41130 ATCBK3 SSL2 ARR8 NTRC ATVLN2 AT2G41820 AGK1 AT2G41890 AT2G42130 AtSPL9 AT2G42220 ATBZIP34 AT2G42510 ATPPC2 AT2G42690 AT2G42750 ATMPK20 ATPAO2 AT2G43030 ATLEUD1 AT2G43150 AT2G43240 BIO2 AT2G43500 Encodes a defensin-like (DEFL) family protein. AT2G43560 AT2G43590 FAB2 ACS1 AT2G43760 5PTase12 ATHOL1 AT2G43945 MTHFR2 AT2G44230 BGLU26 CHL-CPN10 AT2G44870 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT2G44970 AT2G45180 AFO encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis AT2G45340 BEN1 AGP8 ATPEX16 PEX11D PLIM2a AT2G45870 ASK20 ATHH2 CYP86A8 AT2G45990 KPHMT1 AtSLD2 AT2G46250 SPA1 AtGH3.11 ATCNGC12 ARF11 ROPGAP3 AT2G46810 PSAP PIL1 PTI1-4 SPL1 AtBOR1 ATDUF5 CER8 AT2G47440 CAO ATMYB12 ATNDT1 AT2G47500 PHR2 AT2G47780 AtTic20-II AT2G47880 CRR6 DEG2 AT2G48020 RPH1 AT3G01060 AtCGS1 AtSS2 ATCFM2 PnsL3 ATHB-1 ATCYP38 AT3G01490 ATBCA1 AT3G01810 AK3 ATKT4 ATRGP1 AT3G02250 ATCOL2 RAD23-3 ATF1 AT3G02750 AT3G02820 PNT1 ATGSTF11 AtUGP1 NPC3 PDE326 AT3G03770 ATMS2 APK3 SDG31 IAA16 EMB3119 PDE181 ATWNK1 ATCYSD1 AT3G05165 ATN AT3G05350 AtRLP31 AT3G05470 RALFL22 Encodes a defensin-like (DEFL) family protein. AIF1 ATSK12 AT3G05900 AT3G05910 AT3G05990 AT3G06180 EMB3004 AT3G06410 RWA2 ACLB-1 GATA15 AT3G06750 AT3G06980 AT3G07270 AT3G07310 ATCSLC06 ATPUB9 AT3G07540 AT3G07890 SCPL27 AT3G08030 AT3G08600 AT3G08660 AT3G08680 ATPK1 LHCB4.2 AT3G09050 ATHY2 PTAC13 Fes1A AT3G09440 AT3G09540 ATPAH1 AT3G09580 CRM3 AT3G09730 ADK1 PIP5K9 OMR1 AT3G10060 ATDFC AtLCY GYRB1 PAL4 SPD1 AHB2 ABCI6 AT3G10720 AT3G10840 LSF2 AtFAD7 AT3G11490 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 ATHST AT3G12050 emb2738 ACT11 AT3G12210 ATHSP70 DRT100 AGC1.5 AtZIP1 PGK1 BRG3 AT3G12930 AT3G13000 AT3G13040 ATSERAT2;2 AT3G13120 AT3G13180 AT3G13226 Cpn60beta2 ATKRS-2 AT3G13510 PUT4 AT3G13740 BGAL1 AT3G14067 FLU AT3G14200 AT3G14205 ESM1 ATPME3 AT3G14330 SRF7 GOX2 GOX1 ATGSL04 ATMPK19 ATRHM3 MSL5 AT3G14890 HEME1 IDM1 MEE35 HCF243 PRPS20 SPL5 ATMT3 SPA3 ATHM4 AT3G15470 AT3G15520 AT3G15550 AT3G15570 AT3G15680 AT3G15690 ADS3 SULTR3;4 MFP1 AT3G16060 PSAH-1 AQP1 NDF4 AT3G16270 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. EMB2083 ABCG29 AT3G16350 AHP4 AT3G16370 JAL35 ATRALF23 ATKINESIN-13A ATEBP AT3G16850 AAE7 LPD1 HCF107 ECT6 POK1 MAT4 ATCRSH CIPK1 HYH AT3G17640 PDE321 ATACP5 RLK902 NMT1 WOX1 AT3G18050 NRPD2B EMB1270 PEX3-1 BTS EMB1865 AT3G18500 ATPUB29 ATWNK6 ACT2 ATPLT5 AT3G18870 AtTic62 AT3G19000 POK2 ATPREP1 ARC6H AT3G19370 PUB25 ATCAD4 AT3G19480 QWRF1 IKU2 BCAT4 ARC5 CBB1 AT3G19850 AT3G20230 AT3G20390 POLGAMMA1 AT3G20680 AT3G20820 PSBTN AtBBX32 GluTRBP 4CL5 4CL2 GLTP3 ADOF2 UGT84A2 AT3G21690 ATSGP2 CYCP2;1 CWLP AT3G22150 ATWNK2 AT3G22520 SOL1 ATTSO1 NET1A AT3G22810 ELIP APS1 PKP-ALPHA ATSR2 ATCFM3A AT3G23090 bHLH34 AT3G23310 ATPHO1 KINESIN-12B AT3G23700 RALFL24 ATSAHH2 GAE6 ATTOPII AT3G23930 AT3G24190 HCF101 ALDH1A AT-HSFC1 PLSP1 AT3G24715 ICK3 GAUT8 ATFKBP62 AT3G25410 AFH1 ATGHBDH AtNIK2 AT3G25570 AAPT2 AT3G25660 AtCHUP1 AOC1 AOC2 AT3G25805 LTA2 RPL15 ATPRX CYP71B22 AT3G26450 GAMMA-TIP2 ORF02 GAPA ATSNM1 AT3G26700 CCB1 ATICE1 ATSKL1 DRB3 YSL6 ATTSO2 GHS1 ATCLC-B LHCB2 ATMDAR4 RPL12 RPL12-C AT3G28040 UMAMIT47 ABCB15 AT3G28460 ABCB19 ATEXP5 AT3G29185 ATCM1 AT3G42660 CHR38 AAO2 AT3G43610 LTPG2 ATGSTU27 ATJ ATNIT1 AT3G44620 AtKIN14h RPL9 AtXTH31 AT3G45160 JK224 AT3G45850 AT3G45900 AT3G45930 ATMYB48 AT3G46370 FLA4 AT3G46630 PTAC16 DUT1 AT3G47070 ATPLC8 PEX11B ATSMC2 CAB4 AT3G47580 PYE AT3G47650 PUB39 AT3G47830 ATATM AT3G48200 AT3G48420 AT3G48460 AHAS DCF GSA2 AT3G49000 AT3G49220 DIN11 BAM2 ATBCAT-3 AtRLP44 AT3G49810 ARLA1C KICP-02 OBP1 CRK ICK2 AT3G50685 BEH1 OEC33 AtHB28 SRS1 GATA6 AT3G51090 AT3G51140 AT3G51150 GMD2 AT3G51280 ATSSL4 ATGLR3.6 AT3G51510 LTP5 ATWNK5 AT3G51720 IMK2 ATG4 AT3G51950 AT3G52110 PSRP2 CP33 AT3G52500 ACA1 FTSZ2-2 BGAL2 KIPK ELL1 AT3G52960 CYP97C1 AtRLP45 ATPAL2 CYP71B5 AT3G53380 AtPIP2;1 AtPPa4 AT3G53680 ATCHX20 ACT3 PYRR HCEF1 ATPTR1 AT3G54210 SCR TBL36 AT3G54290 AT3G54390 AT3G54400 ATGR2 SETH3 PIP2;5 LHCA1 ATGRXCP PMR6 AT3G54930 PLA PGPS2 GSTL2 A11 PDE329 PPL1 ATTSC13 OVA1 AT3G55420 P5CS2 ATDFD SBPASE ESK1 AT3G56010 UGP3 IMK3 AT3G56160 AT3G56290 AT3G56370 PPD6 AT3G56680 AT3G56760 AT3G56870 PSRP5 ACSF AT3G57020 AT3G57030 AT3G57060 AT3G57070 BPG2 PrfB3 AGL16 AT3G57400 ATVLN3 AT3G57800 AT3G57830 SPL15 GIS ATMYOS3 ATWRKY69 IPMI1 AT3G59040 PIF5 GUN4 ACR4 AT3G59780 AT3G59940 MTHFR1 AT3G60320 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. HAT3 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. CDS5 AT3G60750 MAP65-4 AT3G61080 GAUT1 HD-GL2-1 ATPIP1 ARATH;BSAS3;1 LHCA2 AtSLD1 ATX3 AT3G61870 CYP20-3 ABCB21 CP12 AT3G62570 ATMYB11 ABCC14 APG3 ATIPT3 CYCP1;1 CSP41A OEP6 AtFAP1 AtcpRRF ATMRK1 AT3G63340 OTP86 APG1 EMB3126 AT3G63510 ATCCD1 BB Conceptual translation of this open reading frame gave the sequence of a 229-residue hypothetical protein that contains the same sequence as the mature A. thaliana chloroplast luminal 19-kDa protein linked to a putative signal sequence. BRCA2(IV) UNE10 AT4G00165 YAB3 EDA8 RLK4 ATT1 ANTR2 FDM2 AtGPAT8 PIP1;4 ATMYC1 AT4G00560 NAD-ME2 ASKTHETA AHDP QUA3 AT4G00870 AT4G00895 MEE47 CRK41 TROL GT72B1 MGP4 AT4G01310 AT4G01460 ABC1 HEMG1 AT4G01790 AGY1 AtSAM2 ATGPAT3 MCM7 AT-RSH1 AT4G02410 ATXT2 AT4G02530 AT4G02630 EOL1 PSAD-1 EMB3129 AT4G03010 AtRBP-DR1 AFB1 XTH9 AT4G03260 PETC ATHM2 AT4G04340 EMB2369 APR ATPC1 CPK27 AT4G04750 ATKEA3 PDF2 AT4G05090 AtMYB74 PSBQ ATK5 Encodes a putative glycosyl hydrolase family 10 protein (xylanase). AT4G08280 ORL1 ARGAH2 APX4 AT4G09040 CRRJ A/N-InvI AT4G09630 ATPD AT4G10060 ATSPS4F ATDET1 AT4G10300 LHCB5 AT4G10390 ATOPT7 AT4G11100 SPA2 AT4G11175 ATMPK5 AT4G11570 BASS5 Hop3 SKU5 FLA2 PSAL AT4G12830 AtENODL19 EPFL9 AT4G13050 SDG22 AT4G13540 CYP83A1 AT4G13840 SHM4 ATSAHH1 SBP1 EDA38 KINESIN-12A PDE226 AT4G14330 AT4G14360 bHLH104 ATECI3 NF-YB3 CIPK4 APS3 ELIP2 AT4G14740 ATTCX2 TUA6 CYP97B3 ATCCT2 AFH3 AT-BETA-AMY AT4G15430 PPD1 AT4G15545 IAGLU AtCLA1 AT4G15830 AT4G16141 AT4G16155 PHYD SPK1 ATOPT3 AT4G16490 AT4G16980 AT-EXPR CLPR4 AtBAM3 ATG2484-1 DELTA-TIP2 AT4G17350 ATRAB1C AtG3Pp4 AT4G17560 LIL3:1 AT4G17650 AT4G17740 ATTPS5 AT4G17810 MYC4 ALMT12 APRR2 AT4G18030 PHYE ATSS4 KAT2 DEG5 TCP2 CH-42 ATWL4 AT4G18740 AtRLP51 AT4G18810 AT4G18820 ATNLM2 CMT2 AT4G19410 AT4G19460 Encodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death. AK-HSDH ATPP2-A1 AAH PTAC14 GALS3 BAM3 ATRAB8D AT4G20760 ATFAH2 GHR1 PyrD AT4G21060 ATRP1 PSBQ B120 ATM4 ATML1 AT4G21770 ATTOM1 AT4G21910 PRXR1 APR3 sks4 AKT2 AT4G22290 CYP706A2 AT4G22730 ATSMO1-2 PGR5-LIKE AT4G22990 CRK21 CRK22 PIP1;5 AT4G23670 AT4G23740 CRF2 CRR31 ARC1 ATCSLG3 ATCSLG1 ATYSL1 cpHsc70-1 AT4G24350 CER2 AGL24 PGI ATHB22 TAR2 AT4G24750 ATRBP31 AT4G24780 AT4G24790 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) AT4G24930 ATHVA22D TPD1 AT4G25030 ACP4 CHLM MSRA4 OTP70 AT4G25280 AT4G25290 ABCB28 ATDTX35 B1 AT4G25830 ATCNFU3 ABCB2 AT4G26130 CGA1 AtFBA7 AtFBA5 AT4G26540 AT4G26555 AGC1-2 AtWRKY20 GDPDL3 ATFIM1 AT4G26710 MAP65-2 VTC2 AT4G26860 AT4G26940 FAD4 AT4G27130 ATK2 AT4G27240 AT4G27300 AT4G27360 CIP7 AT4G27435 AtENODL2 AT4G27560 NARA5 AT4G28080 AT4G28180 ATEXPB3 AT4G28360 AT4G28480 PSB28 AMT1;4 AT4G28740 PSAE-1 AT4G28780 emb2726 IAA27 AT4G29100 AT4G29120 ATHXK1 ADS1 PFK1 ACHT2 ATPAO5 AT4G30020 ATVLN4 AT4G30180 AHA2 VEL1 AR2 GAE1 AT4G30470 SARK GGP1 BRS1 PDE327 scpl29 ASHR3 FAD6 ATCIPK6 AT4G31310 AT4G31360 ACDO1 HCF153 ATCSLC05 EMB2797 PGR3 ATGPX7 AT4G32000 PDE334 AT4G32330 AtCESA1 LUG AT4G32590 ATSDX1 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHB-8 ATH1 AtGLDP1 AT4G33080 ATPME44 FAB1A ATHDA14 AT4G33500 AtHMAC6 KUP5 AT4G33560 ATBCA5 AT4G33740 AT4G33760 CER4 ATOST1 CCoAOMT1 AT4G34090 SEP1 AT4G34220 ALDH3 CLB6 ATCAP1 AT4G34600 BLH6 SSR16 ERG9 SQS2 ATVHA-C1 AT4G34730 ASE2 MRL1 AT4G34920 SLP2 AtMYB32 CAT2 PIP2;7 HCF244 AT4G35270 ATGLR3.2 TMT2 AT4G35320 AT4G35335 XCP1 AFT DAW1 MCA1 ARAC6 AT4G36180 CYP84A1 GATA7 ALDH3F1 BGAL3 AT4G36390 AT4G36530 BEE2 ATRL3 AtPLT6 AtGGPPS11 BLH2 ACD2 CYP81F3 ANT SQE3 XTH7 SHM1 ATCAD6 ATCAD7 pde191 AQI ATROPGEF1 AtVAB2 AT4G38520 ATMYB4 AT4G38660 AT4G38690 ROC1 ATPRP4 ATVHA-C3 AT4G38950 AtFBA2 AT4G39040 AT4G39050 VHA-A3 SHL1 AT4G39150 ATSEC14 APL3 ATCAD9 ATCESA2 SAMC1 ATSK2 AT4G39630 FKBP16-2 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. ATIPS1 AKN2 CYP79B2 AT4G39960 AT4G39970 DHS1 ATGB3 AT5G01020 LAC8 AT5G01090 SQD2 AT5G01260 ATPDX1 AIRP2 LHCB4.1 AT5G01590 ATRAPTOR1A AT5G01790 AT5G01890 STN8 OHP AT5G02160 ATMTRNASEII AT5G02370 PLL2 AT5G02460 AT-HSC70-1 AT5G02710 AT5G02940 iqd2 AT5G03140 ATRAB AtNCS1 SBE2.2 TRM28 ATCSLA09 AT5G03870 AT5G03880 54CP GYRB2 FD-GOGAT ATPAL3 ATLDA BTR1 KCS19 SIR ACR12 ATOFP13 NOL ATNAS1 AT5G04980 RUL1 ATCESA3 AT5G05180 AtCHIL AtFAD8 ATEGY2 AT5G05790 UGT76C2 ATROPGEF5 NEDD1 2-Cys ATNUDX27 AT5G06670 TBR HAT14 AT5G06970 AT5G07020 ERL2 ATMSRA2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ATMYB29 AT5G07800 AT5G08050 TCP17 BIM1 ATAIH AT5G08390 FTRA2 AT5G08415 AT5G08430 PDE340 AT5G08650 NDC1 AAP2 AtSRT2 PI-4KBETA2 AtPPa6 PMDH2 AT5G09760 CESA5 PROPEP5 AT5G10020 ATMIPS3 AST68 ASN3 AtRABH1e AT5G10390 KAC1 PAS2 AIL6 AT5G10605 AT5G10690 CIPK5 AT5G10960 AT5G10970 ATSPS2F HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 TINY2 ATNADP-ME2 NDL2 AT5G12110 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 DiT1 AT5G12970 ATGSL12 ATCYP20-2 AT5G13140 AtSWEET15 CRN AT5G13410 IQD11 EMB3136 SULTR4;1 ABAR SVR3 SIG4 ZIF1 ZIFL1 AT5G13770 CCS52B ATCHS AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 AT5G14210 EMB3137 AT5G14410 AT5G14460 AT5G14500 AT5G14610 ATSK13 ATDEF2 AT5G14700 BETA AO AT5G14880 AT5G14910 AT5G14970 AT5G15070 GASA4 AtENODL17 AT5G15390 ATCNGC2 APG6 GAUT14 BCCP2 LNG1 AtbZIP3 AT5G15910 AT5G15950 AtNIK1 AT5G16240 VAT1 BCCP ATF2 LRR1 AtMYB43 DHAR3 EMB2247 AT5G16720 AT5G16810 AT5G17010 ENH1 PSY AtUGP2 ER-ANT1 MEX1 AT5G17630 AT5G17660 AT5G17670 EMB1241 PSRP6 ATCIMS AT5G18140 anac088 ATSRA1 AT5G18500 AT5G18550 ATOBGC EMB40 AT5G18600 PCB2 BAM9 EMB3013 NSH3 BUD2 ADG2 AT5G19290 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. ATOEP80 AT5G19730 AT5G19760 TUA3 TUA5 AtRbcX2 AT5G19940 AT5G19970 AT5G20050 AtHBP5 PHT4;5 ATMGD2 ATXIK ATBRXL4 AT5G20700 ATCPN21 AT5G20885 CRR42 AT5G21100 AT5G21105 AT5G21222 CIPK26 ATCKX5 ATHMA8 AT5G22020 UBP8 anac089 AT5G22340 emb1211 ATMGT10 H2B IMS3 CaS HCF136 AT5G23170 AT5G23280 HMGB6 AT5G23480 EFO2 AT5G23750 AT5G23820 TUB8 AT5G23910 AT5G24010 SLAH3 ATSIG5 SQE5 ATSS1 AT5G24320 ATYSL2 PGL5 LSU2 CRY3 AT5G25590 AtYUC6 BGLU37 AtTGG1 AT5G26330 PYR6 ATIREG3 AT5G27290 SFP1 SFP2 AT5G27550 AT5G27560 ATCYSD2 DES1 ATNEK3 AT5G28300 AT5G28500 AT5G28750 GME ARRPS1 AT5G34930 AT5G35170 AMOS1 CAC2 ATGSL1 AHK2 AT5G35970 atylmg3 AT5G36160 ATPRFB AT5G36230 CAT3 AT5G37010 ARF8 ARLA1A AT5G37790 PMI15 RBCS3B AT5G38520 CRR7 UDG4 AHP3 ORTH1 DEG8 AT5G40140 CRK42 RS5 AT5G40450 AT5G40500 GPDHp RPL27 DRB5 GL3 ATUBC8 AT5G41760 CIP1 AT5G42070 ATBG_PPAP FTSH5 AOS ATIPK1 AT5G43150 SPL2 TZP NDH18 KCS20 AT5G43870 AT5G44020 AT5G44050 ATGLK2 TUB4 AT5G44520 MCM6 GALS2 AtPP2-A6 AT5G45170 AT5G45290 ATFKBP13 AT5G45700 AT5G45720 CIPK20 CHL AtNUDT11 AT5G45950 APE2 AtLARP6a KAS1 AT5G46390 AT5G46420 BSK2 AT5G46580 bHLH071 TET1 PYL1 BOU ATNIG1 AT5G46910 Encodes the mitochondrial ATP synthase subunit delta. LON2 LIL3:2 AT5G47190 AT5G47390 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT5G47620 NF-YB2 FPS1 FRA1 AMK2 ATRBOHD AT5G48220 AACT2 ADG1 AT5G48360 AT5G48460 HINT3 ATFKBP65 AT5G48590 ATCAP-C AT5G48790 ATSDI1 KAT5 AT5G48900 LPA66 HCT OVA2 DDM2 HRB1 ATMYB111 ACLB-2 XIP1 ATGH9A1 cpHsc70-2 ATPPOX AT5G50000 AT5G50100 AT5G50110 AT5G50180 OLD5 AT5G50370 AT5G50420 CAA33 AT5G51110 AT5G51140 ATTPPA LPA2 EXL3 AT5G51560 At-NEET ATPGMP AT5G52010 ATBAG1 CRR1 CCB2 HCF106 SCL8 B2 ATHS83 AT5G52660 AT5G52780 ATWRKY27 AT5G52960 AT5G52970 AT5G53140 FTSH11 PDV1 AT5G53340 ORG1 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G53500 AtPLR1 AT5G53750 ATMLO11 AtPSKR2 AT5G53900 TAT7 ATOMT1 PTAC15 LHCB3 ATM2 CcdA AHL CRLK1 RPL24 THI1 VTC5 AT5G55220 ATMAP65-1 AtIAMT1 AT5G55400 GDPDL4 LOP1 AT5G55620 ATKCO1 CRR21 ATOPT1 AT5G55950 AtHsp90-3 AtHsp90.2 AT5G56040 ATPEX5 ILL1 AT5G56790 AT5G56840 AT5G56850 GATA21 AT5G56890 NAP1;3 LUT2 CIA2 PSD2 AT5G57345 AHA3 ATVDAC4 BIO1 AT5G57610 CER3 ADCL APO2 ATCNGC5 NPL1 AT5G58150 AT5G58160 NdhN AT5G58330 AT5G58520 AT5G58540 EOL2 FOLK ATPLC5 DDB2 AtcPT4 ftsh9 AT5G58950 GIL1 AT5G59250 ATUXS3 AT5G59610 AT5G59690 AtVIP2 ATEXO70H7 HTA6 AT5G59970 AT5G60270 LecRK-I.9 ARF4 ATPDX2 CLB4 ATMYB34 COB AT5G60930 PNM1 PDCB1 VIP4 AT5G61240 PIF7 AT5G61350 AtMYB28 AT5G61570 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AtTudor2 APC1 AML1 ARF1-BP AT5G62210 ATGT18 AT5G62350 CDF1 AHA11 TUB3 AT5G62710 DXR ATPEX14 AT5G62840 AT5G62890 BT1 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AT5G63410 ATFP3 SNRK2-5 AT5G63700 AT5G63710 SHA1 AT5G63940 ALX8 PSAN DiT2.2 DCT ATGCH JK218 AT5G64460 EMB3144 AT5G64640 CESA6 CLEL ASN2 ATPUB38 AT5G65220 ATHB-5 AT5G65360 KAC2 GTE7 BAM1 XTH6 ATRLP57 STR16 ATLFNR1 AT5G66230 AT5G66310 AT5G66470 AT5G66520 MSP-1 ENY AT5G66740 AT5G66770 ABA1 RALFL34 ICU2 EPS1 TOE3 AT5G67200 IRX15-L CYCD3;2 ATEB1C RLK ARA12 PSBA MATK RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 RPS14 PSAB PSAA YCF3 RPS4 NDHJ PSBG NDHC ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBF PSBE ORF31 PETG PSAJ RPS18 RPL20 CLPP1 PSBB PSBT PSBN PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 RPL2.1 RPL23 NDHB.1 RPS7 NDHF YCF5 NDHD NDHE NDHG NDHI NDHA NDHH RPS15 RPS7.2 NDHB.2 RPL23.2 RPL2.2 NAD9 RPL16 ATP6 NAD5 COX3
GO:0044281 small molecule metabolic process	BP	1.251e-180	AT1G01080 PDH-E1 KCS1 AtFKGP ATGPAT4 PIP1;3 AT1G01630 GAE2 AT1G02150 AtSAM1 FZL AtBE2 POR ATHM1 KCS2 AT1G04420 LIP2 AT1G05150 emb2394 LPA19 UGT1 5PTASE13 ATCTL1 BBX24 AT1G06550 HPD encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase OE23 AtSLP1 ATNDI1 EMB2784 ATPCNA1 AT1G07440 KCS3 AXS2 ADT6 PSAO FATB ALB-1V ABC1 AVDE1 ATSYP111 ACHT4 AT1G09310 CRB iPGAM1 AtHIR1 ATBCAT-1 ATGSTU18 ACLA-1 AT1G10740 ATFD1 CLPP6 ADT1 ATGLX1 AT1G11860 ATSRS AT1G12080 ELP ATNRT1 AT1G12570 AT1G12800 AFB3 GAPA-2 AOC4 AT1G13650 AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 AT1G14190 AT1G14270 SBH2 AT1G14345 PSS1 AT1G15410 AT1G15710 CP24 NDF1 ADAP AT1G16080 CYP79F2 BUS1 UP6 SPS2 AtHBP1 FUG1 GLYR2 AT1G18060 AT1G18460 ATSOT17 AT1G18660 NDF6 AT1G19140 LHCA2*1 KCS4 JMT ATLFNR2 CVP1 DRT112 AT1G21440 ATNADK2 AT1G21670 AT1G22170 AT1G22630 AT1G22850 AOAT1 AOR UGT74B1 ASB1 CER60 Cpn60beta4 ARAB-1 AT1G29670 AT1G29700 PDH-E1 PSAK AAE14 AT1G30690 GlcNAc1pUT1 IMPL1 AK-HSDH PSAF FEI1 ATROPGEF14 AT1G31710 CYP97A3 ACBP PRK ATNSI ACT1 PKp3 AT1G32470 GBSS1 PRPL11 AT1G33110 EMB3003 AT1G35420 ACC1 AT1G36280 SHM7 ATNR2 expressed protein localized to the inner membrane of the chloroplast. GAPB ATSDC1 CP22 ATMCM2 AT1G44920 AtBGAL5 ACD1 GATB AtPMEAMT AT1G49380 LACS2 AtCXE5 FTSH1 ATHX GDC1 AT1G51110 AT1G51340 PSAH-2 ATBG1 mMDH1 ATMUM4 AtFAP3 ESP ABCD2 ACP2 AtTLP18.3 ATLOX1 AT1G55260 AT1G55360 ZKT PSAG ATCSLE1 ATSERAT2;1 AT1G55960 AT1G56190 ATNAS4 AT1G56500 ATATP-PRT1 SQE1 AT1G60000 DHNS ABC4 ATB2 LHCA3 ACO2 FMO KAS AT1G62660 ATSCO1 AT1G62780 NRS/ER LACS3 BDG1 NDF2 AMT1;2 G-TMT AT1G65230 FMO cICDH GAD2 AT1G66130 ATGSR2 AT1G66330 AT1G66430 DIN9 AT1G67280 ATLOX6 AT1G67700 ATKCR1 PSBY ATFXG1 AT1G67950 ATHPR1 AT1G68260 CER6 PSRP3/1 PHYLLO BIM2 FLN2 HEMB1 NRT1.7 AT1G70280 ATBCA4 AT1G70480 AOAT2 JAZ9 CRR23 AT1G70770 AT1G70985 AT1G71710 AT1G72500 AT1G72810 EDA17 LPA3 ATPIN1 ENO1 AT1G74070 ATSOT18 ATSOT16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATKAS2 emb2184 UMAMIT5 AtGH9B7 LQY1 AtVAB1 ATCDSP32 PETE1 AT1G76120 sks5 AT1G76450 AtHMGR1 AT1G76570 ACR3 AT1G77090 LACS9 LAX3 AT1G78040 ATGSTU20 ATGA2OX1 SPS1 ATRHM1 ATGGH2 ATLUP1 PSBR AtkdsA1 PGK ATNADP-ME4 NIP6 RPI2 RGA AT2G03420 LACS8 FLA7 EMB2761 AT2G05920 ENR1 AtOPR3 EXGT-A1 AT2G07689 AtXYP2 AKN1 AGP9 AT2G15020 ATHNIR KCS9 MCM4 ADC1 HY3 ATHMA4 AT2G19940 AAS ALF1 LIP1 PSB29 PDTPI ATSULA BBX18 AtFBA1 AT2G21385 AT2G21860 AT2G21960 PLAT2 AT2G22230 ATIPS2 AAT SCPL8 AT2G23390 NAPRT2 ATMES7 ACL ATMES3 YCF37 AT2G24020 AT2G24060 PRPL35 ALDH11A3 AT2G24280 AFR AT2G24580 AT2G25530 AT2G25830 OVA4 AtGLDP2 FDH ATDUF3 HO2 KCS11 AT2G26730 AT2G26800 ATCDPMEK AT2G27680 ADT3 ADCS AT103-1A PY ANTR1 AtFAD3 EMB3147 ATFC-II CYP71A13 ATCOQ3 FTSH2 BBX25 AT2G31670 AT2G31790 ATCB5-B AtCLO3 PRPL28 AT2G34460 AT2G34590 ATFAH1 EDA3 AT2G35260 GDCH AT2G35390 AT2G35410 SKL2 ATCSLA07 AT2G35880 BLH1 ATE2FA AT2G36145 GAMMA-TIP MAT3 AT2G36950 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 UMAMIT12 AT2G37660 CAC3 ATPDX1.1 ATMVD1 PIP2;6 NATA1 ATMTP11 PnsL1 RCA CYT1 ATKT2 SSL2 NTRC AGK1 AT2G42130 AT2G42220 ATPPC2 AT2G42690 AT2G43030 ATLEUD1 BIO2 AT2G43560 FAB2 ACS1 5PTase12 ATHOL1 MTHFR2 BGLU26 CHL-CPN10 AT2G44920 AT2G45180 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis BEN1 ATPEX16 ATHH2 CYP86A8 AT2G45990 KPHMT1 AtSLD2 AtGH3.11 PSAP CER8 CAO PHR2 AT2G47780 CRR6 DEG2 AT3G01060 AtCGS1 AtSS2 ATCYP38 ATBCA1 AK3 ATKT4 ATRGP1 AT3G02250 ATF1 ATGSTF11 PDE326 ATMS2 EMB3119 ATCYSD1 Encodes a defensin-like (DEFL) family protein. EMB3004 AT3G06980 AT3G07270 AT3G08680 LHCB4.2 PTAC13 ADK1 PIP5K9 OMR1 ATDFC PAL4 AHB2 ABCI6 AT3G10720 AtFAD7 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 ATHST PGK1 AT3G12930 ATSERAT2;2 AT3G13120 ATKRS-2 PUT4 CYP90D1 FLU AT3G14205 ESM1 ATPME3 ATRHM3 HEME1 ATHM4 AT3G15520 ADS3 MFP1 NDF4 AT3G16370 JAL35 AAE7 LPD1 ECT6 MAT4 ATCRSH NMT1 EMB1865 AT3G19480 BCAT4 CBB1 AT3G20390 ADOF2 AT3G22520 APS1 PKP-ALPHA ATFAO3 AT3G23700 ATSAHH2 GAE6 HCF101 PLSP1 ATGHBDH AOC1 AOC2 AT3G25805 LTA2 ATPRX AT3G26450 GAMMA-TIP2 GAPA CCB1 ATSKL1 ATTSO2 ATMDAR4 UMAMIT47 AT3G28200 AT3G29185 ATCM1 AAO2 LTPG2 ATNIT1 RPL9 AT3G45160 PTAC16 DUT1 PEX11B CAB4 AT3G47650 AT3G48200 AT3G48420 AT3G48460 AHAS DCF GSA2 ATBCAT-3 AT3G50685 OEC33 AT3G51090 AT3G51140 GMD2 LTP5 ATG4 PSRP2 CP33 AT3G52500 ACA1 FTSZ2-2 ELL1 CYP97C1 ATPAL2 AtPIP2;1 PYRR HCEF1 AT3G54210 AT3G54400 SETH3 ATGRXCP PGPS2 PPL1 ATTSC13 OVA1 P5CS2 ATDFD SBPASE AT3G56010 AT3G56060 AT3G56290 ACSF ATWRKY69 IPMI1 AT3G59040 PIF5 GUN4 AT3G59780 MTHFR1 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. AT3G60750 ATPIP1 ARATH;BSAS3;1 AtSLD1 AT3G61870 CYP20-3 CSP41A AtFAP1 AtcpRRF APG1 EMB3126 AT3G63510 ATCCD1 ATT1 ANTR2 AT4G00560 NAD-ME2 AT4G00895 TROL AT4G01310 AtSAM2 AT-RSH1 ATXT2 AT4G02530 EOL1 PSAD-1 EMB3129 PETC ATHM2 EMB2369 APR ATPC1 AtMYB74 ARGAH2 APX4 ATPD AT4G10300 LHCB5 AT4G10390 BASS5 FLA2 AT4G13050 CYP83A1 AT4G13840 SHM4 ATSAHH1 ATECI3 APS3 CYP97B3 ATCCT2 IAGLU AtCLA1 SPK1 CLPR4 AT4G17560 LIL3:1 AT4G17650 AT4G18030 CH-42 AK-HSDH ATRAB8D ATFAH2 PyrD ATRP1 PRXR1 sks4 AKT2 ATSMO1-2 PGR5-LIKE PIP1;5 AT4G23670 AT4G24350 CER2 PGI ATHB22 TAR2 AT4G24750 ATRBP31 AT4G24930 ACP4 CHLM MSRA4 AT4G25280 B1 AtFBA7 AtFBA5 GDPDL3 VTC2 AT4G26860 FAD4 ATK2 AtENODL2 NARA5 AT4G28080 PSB28 AT4G28740 PSAE-1 emb2726 AT4G29120 PFK1 ACHT2 AT4G30020 AHA2 GAE1 GGP1 FAD6 AT4G31310 EMB2797 PGR3 PDE334 AtCESA1 AT4G32590 ATSDX1 ATH1 AtGLDP1 ATHDA14 AtHMAC6 KUP5 ATBCA5 AT4G33740 AT4G33760 ATOST1 CCoAOMT1 AT4G34090 SEP1 CLB6 ERG9 SQS2 ASE2 MRL1 SLP2 HCF244 AFT MCA1 AT4G36390 AtPLT6 AtGGPPS11 ACD2 CYP81F3 SQE3 XTH7 SHM1 AQI AtVAB2 ROC1 ATPRP4 AtFBA2 AT4G39040 VHA-A3 SHL1 ATSEC14 ATCESA2 ATSK2 ATIPS1 AKN2 CYP79B2 AT4G39970 DHS1 AT5G01020 AT5G01090 SQD2 AT5G01260 ATPDX1 AT-HSC70-1 AtNCS1 SBE2.2 54CP FD-GOGAT ATPAL3 ATLDA KCS19 SIR ACR12 ATNAS1 AT5G04980 ATCESA3 AT5G05180 AtFAD8 ATEGY2 2-Cys ATNUDX27 ERL2 ATMYB29 AT5G08050 FTRA2 AT5G08415 AT5G08430 PDE340 AT5G08650 AtPPa6 PMDH2 PROPEP5 ATMIPS3 AST68 ASN3 PAS2 AT5G10690 PPD5 ATNADP-ME2 TUB6 DiT1 AT5G12970 ATCYP20-2 AT5G13140 SIG4 ATCHS AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 EMB3137 AT5G14460 AT5G14500 ATDEF2 BETA AO AT5G14910 GASA4 AtENODL17 BCCP2 AT5G15910 AT5G15950 AT5G16240 VAT1 BCCP ATF2 LRR1 EMB2247 ENH1 PSY AtUGP2 MEX1 ATCIMS AT5G18600 PCB2 NSH3 ADG2 AT5G19760 AT5G19940 ATMGD2 ATCPN21 AT5G21100 AT5G21105 ATHMA8 AT5G22340 IMS3 CaS HCF136 AT5G23820 ATSIG5 SQE5 AT5G24155 PGL5 BGLU37 AtTGG1 PYR6 ATCYSD2 DES1 GME ARRPS1 AT5G34930 AT5G35170 CAC2 ATGSL1 atylmg3 AT5G36160 CAT3 AT5G38520 UDG4 DEG8 RS5 AT5G41760 FTSH5 AOS ATIPK1 NDH18 KCS20 AT5G44020 AT5G44520 AT5G45280 ATFKBP13 CHL AtNUDT11 AT5G45950 APE2 KAS1 AT5G46580 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. LIL3:2 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. FPS1 FRA1 AMK2 AT5G48220 AACT2 ADG1 HINT3 KAT5 OVA2 ACLB-2 ATGH9A1 ATPPOX AT5G50000 AT5G50100 OLD5 AT5G50370 AT5G51110 AT5G51140 At-NEET ATPGMP CRR1 B2 AT5G52780 AT5G52960 AT5G52970 FTSH11 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 AT5G53750 TAT7 ATOMT1 RPL24 THI1 VTC5 AT5G55220 ATMAP65-1 GDPDL4 AT5G56040 ATPEX5 AHA3 BIO1 CER3 ADCL APO2 NPL1 NdhN AT5G58330 EOL2 FOLK AtcPT4 ATUXS3 LecRK-I.9 ATPDX2 CLB4 ATMYB34 COB PNM1 PDCB1 AtMYB28 AtTudor2 AT5G62210 AT5G62350 AHA11 DXR ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AT5G63700 ALX8 PSAN DCT ATGCH ASN2 STR16 ATLFNR1 AT5G66470 MSP-1 ABA1 EPS1 ATPA ATPF ATPH ATPI RPS14 ATPE ATPB ACCD NDHB.1 NDHF NDHD NDHE NDHB.2 ATP6 NAD5
GO:0044763 single-organism cellular process	BP	2.961e-168	AT1G01080 PDH-E1 KCS1 AtFKGP PYL9 ATGPAT4 PIP1;3 AT1G01630 ATKEA1 GAE2 AT1G02110 AT1G02150 CER1 AtSAM1 ATCSLD5 LPA1 AT1G03020 AtD27 NET1D PSAD-2 FZL AtBE2 AT1G03440 POR ATHM1 AT1G04040 ABCC5 ATXIB KCS2 AXR3 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT1G04420 AT1G04430 LIP2 AT1G04680 TOR2 ATGTF2H2 AT1G05150 AT1G05170 emb2394 ATGLR3.4 LPA19 UGT1 5PTASE13 ATCTL1 BBX24 RHON1 ATGSL07 AT1G06550 HPD OE23 AT1G06830 AtSLP1 ATNDI1 AT1G07280 EMB2784 ATPCNA1 AtRLP1 ATRAB-A2B AT1G07440 KCS3 ATMPK13 AXS2 ADT6 AT1G08280 PSAO FATB ALB-1V ABC1 AVDE1 ATSYP111 ACHT4 AtMYB60 ATCAX11 AT1G09310 CRB AT1G09440 iPGAM1 AtHIR1 LRR ATBCAT-1 ATGSTU18 ATGSTU17 ACLA-1 AT1G10740 AT1G10850 AT1G10900 ATFD1 AT1G11050 SCM AT1G11340 CBRLK1 AT1G11410 ATSS3 CLPP6 ADT1 ATGLX1 AT1G11860 ATSRS ELP ATNRT1 AT1G12244 PHR1 ARK3 AT1G12460 AT1G12500 AT1G12800 AFB3 ICE2 GAPA-2 AOC4 Encodes protein phosphatase 2A (PP2A) B'theta subunit. Targeted to peroxisomes. AT1G13650 AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 AT1G14270 SBH2 AT1G14345 AtMYB124 RHA2A PSS1 AT1G15160 AT1G15180 AT1G15410 CYCA2;3 AtAVP1 AT1G15710 CP24 FDM1 ATCCR1 ATNRAMP6 NDF1 ADAP AT1G16080 CYCB3;1 ATOCT3 CYP79F2 BUS1 ATMYB58 AT1G16680 UP6 ACR11 SPS2 AtHBP1 AT1G17200 FUG1 GLYR2 AT1G18060 ATMPK8 AT1G18440 AT1G18460 ATSOT17 AT1G18660 NDF6 NRT1.9 AT1G19140 LHCA2*1 BES1 KCS4 AT1G19450 JMT ATCLH1 AT1G19710 ARF5 APS2 TUB5 ATLFNR2 ARAC4 ATEXP11 CVP1 DRT112 ASG5 XCP2 AT1G21350 AT1G21440 AT1G21630 ATNADK2 AT1G21670 LYM1 ATPIP5K1 AT1G22170 AT1G22630 ATRABG3B AT1G22850 AT1G23220 AOAT1 AOR UGT74B1 ASB1 CER60 AT1G26190 Cpn60beta4 AT-EXP10 AT1G27120 ATGSTU13 LCR AT1G27480 MAP65-8 ABCB13 ABCB14 AtRLP4 SRD2 ARAB-1 ATSCAR3 AT1G29670 AT1G29700 RKF1 AT1G29820 PDH-E1 PSAK AAE14 GlcNAc1pUT1 IMPL1 AK-HSDH PSAF FEI1 ATROPGEF14 AT1G31710 CYP97A3 ACBP PRK ATNSI AtLrgB AT1G32160 ACT1 AT1G32220 PKp3 NRT1.5 AT1G32470 GBSS1 PRPL11 AT1G33080 AT1G33110 AT-GTL1 AT1G33600 AT1G33700 SAMC2 ATSERK2 EMB2756 AT1G35420 RPL21C ACC1 AT1G36280 SHM7 ATNR2 PMI1 expressed protein localized to the inner membrane of the chloroplast. GAPB AtcFBP ATSDC1 CYCA1;1 CP22 ATMCM2 AT1G44920 AtBGAL5 ABF2 Lhca5 AT1G45688 5PTASE11 AT1G47530 mtLPD1 AT1G48090 DGAT3 EMB3105 ACD1 RKL1 GATB AtPMEAMT ACT8 AT1G49380 LACS2 AT1G49740 TUA2 FTSH1 AT1G50270 ATHX ATHKL1 AT1G50660 GDC1 AT1G51110 AT1G51200 AT1G51340 4CL.1 ATB PSAH-2 ATROPGEF11 ATBG1 ATFPG-1 SPA4 TCP3 mMDH1 AT1G53290 TTL1 ATMUM4 ATMPK18 AtFAP3 ESP ABCD2 AT1G54500 ACP2 ATATG18H AtTLP18.3 AT1G54790 ANP2 ATLOX1 AT1G55260 ATDEK1 AT1G55360 NDF5 ZKT CPN60B AT1G55550 PSAG ATCSLE1 ATSERAT2;1 AT1G55960 AT1G56050 AT1G56190 AT1G56210 ATNAS4 AT1G56500 SVB AT1G57770 ATATP-PRT1 AT1G58170 AtHEMA1 SQE1 ARF1 AT1G60000 DHNS ABC4 ATB2 AtNIK3 ATRECQ4B ATFD2 LHCA3 AT1G61610 AT1G61660 AT1G61740 ATGPT2 APR2 AT1G62250 ACO2 FMO KAS AT1G62660 ATSCO1 AT1G62780 NRS/ER AT1G63010 NRPD1 AT1G63640 AT1G64150 AT1G64370 LACS3 AT1G64500 AT1G64510 BDG1 TUA1 NDF2 AMT1;2 G-TMT CDI Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication). 4CL3 AT1G65070 AT1G65230 PTAC4 AtRLP10 ATPP2-A5 ATPAO4 FMO AT1G65870 cICDH GAD2 AT1G66130 TMK1 ATGSR2 AT1G66330 RGL AT1G66430 DIN9 AT1G67280 ATLOX6 EMB2814 AT1G67700 ATKCR1 PSBY ATFXG1 CSK AT1G67870 AT1G67950 ATHPR1 AT1G68260 AT1G68400 CER6 PSRP3/1 AT1G68600 AT1G68780 CLE12 PHYLLO BIM2 FLN2 AT1G69420 AGO7 AT-EXP1 AtTCP15 HEMB1 CMT3 NRT1.7 EMB25 AT1G70200 ATCYCD1;1 AT1G70280 PG2 ATBCA4 AT1G70480 AT1G70550 AOAT2 ABCB26 MMZ2 JAZ9 PGM2 CRR23 AT1G70770 MLP43 AT1G70985 FAB1C AT1G71140 AT1G71480 AT1G71710 AtCPB AT1G72230 AT1G72270 PSY1R AT1G72500 ATGER1 AT1G72810 AT1G72840 EDA17 LPA3 AT1G73110 AT1G73170 ATPIN1 AT1G73600 AT1G73655 ATMPK15 AtEIL3 AT1G73740 ENO1 AT1G74070 ATSOT18 ATSOT16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. IQD31 QKY AT1G74730 AT1G74840 ATKAS2 emb2184 UMAMIT5 AtGH9B7 LQY1 ATCLV1 AtVAB1 ATCDSP32 PETE1 AT1G76110 AT1G76120 AMY2 CYCB2;4 AT1G76450 AtHMGR1 AT1G76570 AT1G76670 ACR3 AT1G77090 PIN6 AT1G77310 TAPX LACS9 LAX3 PIP5K2 AT1G78010 AT1G78040 RAP2.4 ATTPPB AUF1 AT1G78180 ATGSTU23 ATGSTU20 ATGA2OX1 SPS1 ATSHB ATRHM1 ATTPS1 MSL6 ATGGH2 ATLUP1 AT1G78995 PSBR ECT8 AtkdsA1 PGK ATNADP-ME4 SGB1 CS17 AT1G80030 AAA1 NIP6 AT1G80850 APG2 AT2G01210 MEE65 RPI2 RGA CRR3 ARR14 AHK4 ATMAP65-6 PQL3 BRL2 AtIDD5 STI AT2G02780 ATEXP15 AT2G03390 AT2G03420 RNE AT2G04280 LACS8 AT2G04700 EMB2761 PGR5 AT2G05790 AT2G05920 ENR1 AtOPR3 EXGT-A1 AT2G07170 ABCC13 AT2G07689 AGT AT2G13440 AKN1 AT2G14910 AT2G15020 AtTic21 ARFB1A AT2G15320 ATHNIR KCS9 MCM4 ADC1 ATGLR2 ARAC1 SCY1 HY3 ATHMA4 AT2G19650 AT2G19780 AT2G19940 ATCLASP PSAE-2 ATXIG AAS ATGLK1 ALF1 LIP1 PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA AT2G21300 BBX18 AtFBA1 AT2G21340 AT2G21380 AT2G21385 AT2G21560 AT2G21830 AT2G21960 CSI1 PLAT2 AT2G22230 ATIPS2 AAT AGL22 IAA8 SCPL8 AT2G23360 AT2G23390 NAPRT2 ATXLG1 ATMES7 ACL ATMES3 YCF37 AT2G24020 AT2G24060 PRPL35 AT2G24230 ALDH11A3 AT2G24280 ATRPA2 AFR AT2G24580 ATGPX1 AT2G25270 AT2G25530 AT2G25800 AT2G25830 OVA4 PDF1.2b AtGLDP2 AT2G26100 ATHSFA2 CYP711A1 FDH ER AR781 ATDUF3 HO2 KCS11 AT2G26690 AT2G26730 SCAB1 AT2G26800 ABCG32 ATCDPMEK AGO4 AT2G27060 LHW AT2G27290 AT2G27680 ATNAT12 ADT3 AT2G28320 DRB2 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 ALB3 ADCS ATEXP6 AT2G29180 ATMTPB1 ATGSTU6 AT103-1A TUB7 PY ANTR1 ATVLN1 AtFAD3 ATZIP6 PBCP EMB3147 ATFC-II KIS ATC4H CYP71A13 ATCOQ3 FTSH2 ASKdZeta AT2G31040 TCP10 ATERF15 BBX25 ATNTH1 AT2G31670 AT2G31790 ATMYO5 ATGSL03 BAM6 ATGLR3.7 AT2G32640 ATCB5-B ATCOP1 ATXID ATSUVH2 AtCLO3 PRPL28 AtCRL2 ATUBC24 ATRANGAP2 AT2G34460 ABR ABCC2 AIR9 ATHB-14 ATFAH1 EDA3 AT2G34930 AT2G35050 AT2G35260 GDCH AT2G35390 AT2G35410 SKL2 FEI2 ATCSLA07 AT2G35760 SAMTL AT2G35840 BLH1 NHL12 ATE2FA AT2G36145 AT2G36200 AT2G36350 DML1 AT2G36570 GAMMA-TIP MAT3 ABCB1 AT2G36950 ATSIG6 ATPAL1 PIP2;2 PIP2;3 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 ABCG33 UMAMIT12 AT2G37540 AS1 ATEXP3 AT2G37660 CAC3 AtAUX1 PSRP4 PDX1L4 ATPDX1.1 PYL4 ATSCAR2 cdf3 RDO2 ATMVD1 MAP65-5 ATPT2 PIP2;6 NATA1 ATMTP11 PnsL1 ATEXP4 RCA CYT1 ATISA1 AT2G40400 HEME2 ATKT2 ETG1 CYP98A3 AT2G41050 AT2G41060 SSL2 ARR8 NTRC ATVLN2 AT2G41820 AGK1 AT2G41890 AT2G42130 AT2G42220 ATBZIP34 ATPPC2 AT2G42690 ATMPK20 AT2G43030 ATLEUD1 AT2G43240 BIO2 Encodes a defensin-like (DEFL) family protein. AT2G43560 FAB2 ACS1 5PTase12 ATHOL1 MTHFR2 BGLU26 CHL-CPN10 AT2G44870 AT2G44920 AT2G44970 AT2G45180 AFO encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis AT2G45340 AGP8 ATPEX16 PLIM2a AT2G45870 ATHH2 CYP86A8 AT2G45990 KPHMT1 AtSLD2 SPA1 AtGH3.11 ATCNGC12 ROPGAP3 PSAP PIL1 SPL1 AtBOR1 CER8 CAO ATNDT1 AT2G47500 PHR2 AT2G47780 AT2G47880 CRR6 DEG2 AT2G48020 AT3G01060 AtCGS1 AtSS2 PnsL3 ATHB-1 ATCYP38 ATBCA1 AK3 ATKT4 ATRGP1 AT3G02250 RAD23-3 ATF1 AT3G02750 AT3G02820 ATGSTF11 AtUGP1 NPC3 PDE326 AT3G03770 ATMS2 SDG31 EMB3119 PDE181 ATCYSD1 AT3G05165 ATN AtRLP31 AT3G05470 RALFL22 Encodes a defensin-like (DEFL) family protein. AIF1 AT3G05990 EMB3004 GATA15 AT3G06750 AT3G06980 AT3G07270 AT3G07310 ATCSLC06 AT3G07540 AT3G07890 SCPL27 AT3G08030 AT3G08600 AT3G08680 LHCB4.2 AT3G09050 ATHY2 PTAC13 ATPAH1 CRM3 AT3G09730 ADK1 PIP5K9 OMR1 AT3G10060 ATDFC AtLCY GYRB1 PAL4 AHB2 ABCI6 LSF2 AtFAD7 AT3G11490 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 ATHST ACT11 AT3G12210 DRT100 AGC1.5 AtZIP1 PGK1 BRG3 AT3G12930 AT3G13040 ATSERAT2;2 AT3G13120 AT3G13226 ATKRS-2 AT3G13510 PUT4 BGAL1 AT3G14067 FLU AT3G14205 ESM1 ATPME3 SRF7 ATGSL04 ATMPK19 ATRHM3 MSL5 HEME1 IDM1 MEE35 PRPS20 ATMT3 ATHM4 AT3G15470 AT3G15520 AT3G15550 AT3G15570 AT3G15690 ADS3 SULTR3;4 MFP1 AT3G16060 AQP1 NDF4 AT3G16270 EMB2083 ABCG29 AHP4 AT3G16370 JAL35 ATRALF23 ATKINESIN-13A ATEBP AT3G16850 AAE7 LPD1 HCF107 ECT6 POK1 MAT4 ATCRSH CIPK1 HYH AT3G17640 PDE321 ATACP5 RLK902 NMT1 AT3G18050 EMB1270 BTS EMB1865 AT3G18500 ACT2 ATPLT5 AT3G19000 POK2 ATPREP1 AT3G19370 ATCAD4 AT3G19480 BCAT4 CBB1 AT3G20390 POLGAMMA1 AT3G20680 AT3G20820 AtBBX32 GluTRBP 4CL5 4CL2 GLTP3 ADOF2 UGT84A2 AT3G21690 ATSGP2 CYCP2;1 CWLP AT3G22520 SOL1 ATTSO1 NET1A AT3G22810 ELIP APS1 PKP-ALPHA ATSR2 AT3G23090 ATPHO1 KINESIN-12B AT3G23700 RALFL24 ATSAHH2 GAE6 ATTOPII HCF101 ALDH1A AT-HSFC1 PLSP1 ICK3 GAUT8 AT3G25410 AFH1 ATGHBDH AAPT2 AT3G25660 AtCHUP1 AOC1 AOC2 AT3G25805 LTA2 ATPRX CYP71B22 AT3G26450 GAMMA-TIP2 ORF02 GAPA ATSNM1 CCB1 ATICE1 ATSKL1 DRB3 YSL6 ATTSO2 ATCLC-B LHCB2 ATMDAR4 AT3G28040 UMAMIT47 ABCB15 AT3G28460 ABCB19 ATEXP5 AT3G29185 ATCM1 AT3G42660 CHR38 AAO2 AT3G43610 LTPG2 ATGSTU27 ATNIT1 AtKIN14h RPL9 AT3G45160 JK224 AT3G45850 AT3G45900 AT3G46370 FLA4 AT3G46630 PTAC16 DUT1 AT3G47070 ATPLC8 PEX11B ATSMC2 CAB4 AT3G47580 PYE AT3G47650 AT3G47830 ATATM AT3G48200 AT3G48420 AT3G48460 AHAS DCF GSA2 AT3G49220 DIN11 BAM2 ATBCAT-3 AtRLP44 ARLA1C KICP-02 OBP1 ICK2 AT3G50685 OEC33 SRS1 AT3G51090 AT3G51140 AT3G51150 GMD2 AT3G51280 ATSSL4 ATGLR3.6 AT3G51510 LTP5 AT3G51720 IMK2 ATG4 AT3G52110 PSRP2 CP33 AT3G52500 ACA1 FTSZ2-2 BGAL2 KIPK ELL1 CYP97C1 AtRLP45 ATPAL2 AtPIP2;1 ATCHX20 PYRR HCEF1 ATPTR1 AT3G54210 SCR AT3G54290 AT3G54400 ATGR2 SETH3 PIP2;5 ATGRXCP PMR6 AT3G54930 PLA PGPS2 GSTL2 PDE329 PPL1 ATTSC13 OVA1 AT3G55420 P5CS2 ATDFD SBPASE AT3G56010 UGP3 IMK3 AT3G56160 AT3G56290 AT3G56370 PPD6 AT3G56680 AT3G56870 PSRP5 ACSF AT3G57060 AT3G57070 BPG2 PrfB3 AGL16 ATVLN3 AT3G57830 SPL15 GIS ATMYOS3 IPMI1 AT3G59040 PIF5 GUN4 ACR4 AT3G59780 AT3G59940 MTHFR1 AT3G60320 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. CDS5 AT3G60750 MAP65-4 AT3G61080 GAUT1 HD-GL2-1 ATPIP1 ARATH;BSAS3;1 AtSLD1 AT3G61870 CYP20-3 ABCB21 ABCC14 APG3 ATIPT3 CYCP1;1 CSP41A OEP6 AtFAP1 AtcpRRF APG1 EMB3126 AT3G63510 ATCCD1 BRCA2(IV) YAB3 EDA8 RLK4 ATT1 ANTR2 FDM2 AtGPAT8 PIP1;4 ATMYC1 AT4G00560 NAD-ME2 AHDP AT4G00895 TROL GT72B1 MGP4 AT4G01310 ABC1 AGY1 AtSAM2 ATGPAT3 MCM7 AT-RSH1 AT4G02410 ATXT2 AT4G02530 EOL1 PSAD-1 EMB3129 AT4G03010 AtRBP-DR1 AFB1 PETC ATHM2 AT4G04340 EMB2369 APR ATPC1 CPK27 AT4G04750 ATKEA3 PDF2 AT4G05090 AtMYB74 PSBQ ATK5 Encodes a putative glycosyl hydrolase family 10 protein (xylanase). ARGAH2 APX4 A/N-InvI AT4G09630 ATPD AT4G10060 ATSPS4F ATDET1 AT4G10300 LHCB5 AT4G10390 ATOPT7 SPA2 AT4G11175 ATMPK5 AT4G11570 BASS5 SKU5 FLA2 PSAL EPFL9 AT4G13050 SDG22 CYP83A1 AT4G13840 SHM4 ATSAHH1 EDA38 KINESIN-12A PDE226 AT4G14330 ATECI3 CIPK4 APS3 ELIP2 AT4G14740 TUA6 CYP97B3 ATCCT2 AFH3 AT4G15545 IAGLU AtCLA1 AT4G15830 AT4G16155 PHYD SPK1 ATOPT3 AT-EXPR CLPR4 AtBAM3 ATG2484-1 DELTA-TIP2 AT4G17350 ATRAB1C AtG3Pp4 AT4G17560 LIL3:1 AT4G17650 AT4G17740 ATTPS5 AT4G17810 ALMT12 APRR2 AT4G18030 PHYE ATSS4 KAT2 TCP2 CH-42 ATWL4 AtRLP51 ATNLM2 AT4G19460 Encodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death. AK-HSDH ATPP2-A1 AAH PTAC14 BAM3 ATRAB8D AT4G20760 ATFAH2 GHR1 PyrD AT4G21060 ATRP1 B120 ATM4 ATML1 AT4G21910 PRXR1 APR3 sks4 AKT2 AT4G22730 ATSMO1-2 PGR5-LIKE AT4G22990 PIP1;5 AT4G23670 AT4G23740 CRR31 ARC1 ATCSLG3 ATCSLG1 ATYSL1 AT4G24350 CER2 AGL24 PGI ATHB22 TAR2 AT4G24750 ATRBP31 AT4G24780 AT4G24930 TPD1 AT4G25030 ACP4 CHLM MSRA4 AT4G25280 AT4G25290 ABCB28 ATDTX35 B1 AT4G25830 ABCB2 AT4G26130 CGA1 AtFBA7 AtFBA5 AT4G26540 AT4G26555 GDPDL3 ATFIM1 AT4G26710 MAP65-2 VTC2 AT4G26860 AT4G26940 FAD4 ATK2 AT4G27300 AT4G27360 CIP7 AT4G27435 AtENODL2 NARA5 AT4G28080 ATEXPB3 PSB28 AMT1;4 AT4G28740 PSAE-1 emb2726 AT4G29120 ATHXK1 ADS1 PFK1 ACHT2 ATPAO5 AT4G30020 ATVLN4 AHA2 VEL1 AR2 GAE1 AT4G30470 SARK GGP1 BRS1 scpl29 ASHR3 FAD6 ATCIPK6 AT4G31310 AT4G31360 ACDO1 HCF153 EMB2797 PGR3 ATGPX7 PDE334 AT4G32330 AtCESA1 LUG AT4G32590 ATSDX1 ATHB-8 ATH1 AtGLDP1 FAB1A ATHDA14 AT4G33500 AtHMAC6 KUP5 AT4G33560 ATBCA5 AT4G33740 AT4G33760 CER4 ATOST1 CCoAOMT1 AT4G34090 SEP1 AT4G34220 ALDH3 CLB6 ATCAP1 AT4G34600 SSR16 ERG9 ATVHA-C1 AT4G34730 ASE2 MRL1 AT4G34920 SLP2 AtMYB32 CAT2 PIP2;7 HCF244 ATGLR3.2 TMT2 AT4G35335 XCP1 AFT DAW1 MCA1 ARAC6 AT4G36180 CYP84A1 ALDH3F1 BGAL3 AT4G36390 AT4G36530 BEE2 AtPLT6 AtGGPPS11 ACD2 CYP81F3 ANT SQE3 XTH7 SHM1 ATCAD6 ATCAD7 pde191 AQI ATROPGEF1 AtVAB2 ATMYB4 AT4G38690 ROC1 ATPRP4 ATVHA-C3 AT4G38950 AtFBA2 AT4G39040 AT4G39050 VHA-A3 SHL1 ATSEC14 APL3 ATCAD9 ATCESA2 SAMC1 ATSK2 AT4G39630 ATIPS1 AKN2 CYP79B2 AT4G39970 DHS1 ATGB3 AT5G01020 LAC8 AT5G01090 SQD2 AT5G01260 ATPDX1 AIRP2 AT5G01590 ATRAPTOR1A AT5G01890 AT5G02160 ATMTRNASEII AT5G02370 AT-HSC70-1 AT5G02710 AT5G02940 iqd2 ATRAB AtNCS1 SBE2.2 TRM28 ATCSLA09 AT5G03870 AT5G03880 54CP GYRB2 FD-GOGAT ATPAL3 ATLDA KCS19 SIR ACR12 NOL ATNAS1 AT5G04980 RUL1 ATCESA3 AT5G05180 AtFAD8 ATEGY2 NEDD1 2-Cys ATNUDX27 AT5G06670 TBR AT5G06970 AT5G07020 ERL2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ATMYB29 AT5G07800 AT5G08050 TCP17 BIM1 AT5G08390 FTRA2 AT5G08415 AT5G08430 PDE340 AT5G08650 NDC1 AAP2 AtSRT2 PI-4KBETA2 AtPPa6 PMDH2 CESA5 PROPEP5 AT5G10020 ATMIPS3 AST68 ASN3 AtRABH1e KAC1 PAS2 AIL6 AT5G10690 CIPK5 AT5G10960 ATSPS2F HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 ATNADP-ME2 NDL2 AT5G12110 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 DiT1 AT5G12970 ATGSL12 ATCYP20-2 AT5G13140 CRN EMB3136 SULTR4;1 ABAR SIG4 ZIF1 ZIFL1 CCS52B ATCHS AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 AT5G14210 EMB3137 AT5G14410 AT5G14460 AT5G14500 ATDEF2 AT5G14700 BETA AO AT5G14880 AT5G14910 AT5G14970 AT5G15070 GASA4 ATCNGC2 GAUT14 BCCP2 LNG1 AtbZIP3 AT5G15910 AT5G15950 AtNIK1 AT5G16240 VAT1 BCCP ATF2 LRR1 AtMYB43 DHAR3 EMB2247 AT5G17010 ENH1 PSY AtUGP2 ER-ANT1 MEX1 AT5G17630 AT5G17670 ATCIMS ATSRA1 AT5G18500 ATOBGC EMB40 AT5G18600 PCB2 BAM9 EMB3013 NSH3 ADG2 AT5G19290 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. AT5G19760 TUA3 TUA5 AT5G19940 AT5G19970 AtHBP5 PHT4;5 ATMGD2 ATXIK AT5G20700 ATCPN21 AT5G20885 AT5G21100 AT5G21105 CIPK26 ATHMA8 AT5G22340 emb1211 ATMGT10 IMS3 CaS HCF136 AT5G23480 AT5G23820 TUB8 AT5G23910 AT5G24010 SLAH3 ATSIG5 SQE5 ATSS1 AT5G24320 ATYSL2 PGL5 CRY3 AT5G25590 BGLU37 AtTGG1 AT5G26330 PYR6 ATIREG3 AT5G27290 SFP1 SFP2 AT5G27550 AT5G27560 ATCYSD2 DES1 AT5G28500 AT5G28750 GME ARRPS1 AT5G34930 AT5G35170 AMOS1 CAC2 ATGSL1 AHK2 AT5G35970 atylmg3 AT5G36160 ATPRFB CAT3 AT5G37010 ARLA1A AT5G38520 CRR7 UDG4 AHP3 ORTH1 DEG8 RS5 AT5G40450 AT5G40500 DRB5 GL3 ATUBC8 AT5G41760 AT5G42070 ATBG_PPAP FTSH5 AOS ATIPK1 AT5G43150 TZP NDH18 KCS20 AT5G43870 AT5G44020 AT5G44050 ATGLK2 TUB4 AT5G44520 AtPP2-A6 ATFKBP13 AT5G45700 CIPK20 CHL AtNUDT11 AT5G45950 APE2 KAS1 AT5G46390 AT5G46420 BSK2 AT5G46580 TET1 PYL1 BOU Encodes the mitochondrial ATP synthase subunit delta. LON2 LIL3:2 AT5G47190 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. FPS1 FRA1 AMK2 ATRBOHD AT5G48220 AACT2 ADG1 AT5G48360 AT5G48460 HINT3 AT5G48590 ATCAP-C ATSDI1 KAT5 AT5G48900 LPA66 HCT OVA2 DDM2 HRB1 XIP1 ATGH9A1 ATPPOX AT5G50000 AT5G50100 AT5G50180 OLD5 AT5G50370 AT5G50420 CAA33 AT5G51110 AT5G51140 ATTPPA LPA2 EXL3 AT5G51560 At-NEET ATPGMP ATBAG1 CRR1 HCF106 B2 AT5G52780 ATWRKY27 AT5G52960 AT5G52970 AT5G53140 FTSH11 AT5G53340 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G53500 AtPLR1 AT5G53750 ATMLO11 AtPSKR2 AT5G53900 TAT7 ATOMT1 PTAC15 ATM2 CcdA AHL RPL24 THI1 VTC5 AT5G55220 ATMAP65-1 AtIAMT1 AT5G55400 GDPDL4 LOP1 ATKCO1 CRR21 ATOPT1 AT5G55950 AtHsp90.2 AT5G56040 ATPEX5 GATA21 NAP1;3 LUT2 PSD2 AT5G57345 AHA3 ATVDAC4 BIO1 CER3 ADCL APO2 ATCNGC5 NPL1 AT5G58150 AT5G58160 NdhN AT5G58330 AT5G58520 AT5G58540 EOL2 FOLK ATPLC5 DDB2 AtcPT4 GIL1 AT5G59250 ATUXS3 AtVIP2 ATEXO70H7 LecRK-I.9 ARF4 ATPDX2 CLB4 ATMYB34 COB AT5G60930 PNM1 PDCB1 VIP4 AT5G61240 AtMYB28 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AtTudor2 APC1 AML1 ARF1-BP AT5G62210 ATGT18 AT5G62350 AHA11 TUB3 DXR ATPEX14 AT5G62840 AT5G62890 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AT5G63410 ATFP3 AT5G63700 AT5G63710 SHA1 ALX8 PSAN DiT2.2 DCT ATGCH JK218 AT5G64460 CESA6 CLEL ASN2 AT5G65220 ATHB-5 KAC2 BAM1 ATRLP57 STR16 ATLFNR1 AT5G66310 AT5G66470 MSP-1 ENY AT5G66740 ABA1 RALFL34 ICU2 EPS1 AT5G67200 IRX15-L CYCD3;2 ATEB1C RLK PSBA ATPA ATPF ATPH ATPI PSBD PSBC RPS14 NDHJ PSBG NDHC ATPE ATPB ACCD PETA PSBF PSBE PETG PSBB PETB PETD NDHB.1 NDHF YCF5 NDHD NDHE NDHG NDHI NDHA NDHH NDHB.2 NAD9 ATP6 NAD5 COX3
GO:0071704 organic substance metabolic process	BP	5.162e-161	LHY AT1G01080 PDH-E1 KCS1 AtFKGP encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT1G01300 AT1G01320 ASG4 AT1G01540 ATGPAT4 PIP1;3 AT1G01630 GAE2 AT1G02110 AT1G02150 CER1 AtSAM1 ATCSLD5 AtD27 NET1D PSAD-2 FZL AtBE2 AT1G03590 PSB27 POR ATHM1 AT1G03730 AT1G04040 KCS2 IAA3 AXR3 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT1G04420 AT1G04430 PDLP2 LIP2 AT1G04680 AT1G04800 TOR2 ATGTF2H2 AT1G05140 AT1G05150 AT1G05170 emb2394 LPA19 UGT1 5PTASE13 BT3 ATCTL1 AT1G05870 encodes a flavonol-7-O-rhamnosyltransferase involved in the formation of rhamnosylated flavonols BBX24 ATMYB13 RHON1 FTSH8 ATGSL07 AT1G06550 HPD encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase OE23 AT1G06730 AtSLP1 ATF2KP ATNDI1 AT1G07280 EMB2784 SR45a ATPCNA1 AtRLP1 ATRAB-A2B AT1G07440 ftsh10 KCS3 ATMPK13 GATA11 AXS2 ADT6 AT1G08280 PSAO FATB ALB-1V ABC1 AVDE1 ATSYP111 ACHT4 AT1G08800 AtMYB60 AT1G09310 CRB AT1G09440 AT1G09750 iPGAM1 AtHIR1 LRR ATBCAT-1 AT1G10120 ATGSTU18 ATGSTU17 ACLA-1 AT1G10740 AT1G10850 AT1G10900 EMB3103 ATFD1 AT1G11050 SCM AT1G11340 CBRLK1 AT1G11410 ATPMEPCRA ATSS3 CLPP6 ADT1 AT1G11820 ATGLX1 AT1G11860 ATSRS Encodes a protein that appears to have 1-amino-cyclopropane-1-carboxylic acid oxidase activity based on mutant analyses. AT1G12080 ELP ATNRT1 ATBETAFRUCT4 AT1G12244 PHR1 AT1G12460 AT1G12500 AT1G12570 ATRBL6 AT1G12800 AFB3 ICE2 GAPA-2 ORP1D GATL3 AOC4 AT1G13650 AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 AT1G14190 AT1G14200 AT1G14270 PKS2 SBH2 AT1G14345 AtMYB124 AT1G14460 AT1G14600 ADL1C scpl50 RHA2A PSS1 AT1G15165 AT1G15410 AT1G15530 CYCA2;3 AT1G15710 CP24 FDM1 AT1G15920 ATCCR1 NDF1 ADAP AT1G16080 CYP79F2 BUS1 ATMYB58 AT1G16680 HCF173 UP6 SPS2 AtHBP1 FUG1 GLYR2 ATEGY3 AT1G18060 ATMPK8 AT1G18170 BEE1 AT1G18440 AT1G18460 AT1G18485 ATSOT17 AT1G18660 AtMYB47 NDF6 AT1G19140 LHCA2*1 BES1 KCS4 AT1G19490 ATDHAR1 AT1G19600 JMT ATCLH1 BEL10 AT1G19710 ARF5 TUB5 ATLFNR2 ARAC4 CVP1 DRT112 ASG5 AT1G20810 XCP2 AT1G21060 AT1G21440 AT1G21590 ATNADK2 AT1G21670 LYM1 ATPIP5K1 AT1G22170 AGL87 AT1G22630 FB AT1G22850 AT1G22910 AT1G23030 AOAT1 ATCAF2 AOR MLP423 UGT74B1 ARL1 AT1G24330 ASB1 BBX15 CER60 AtPERK10 AT1G26190 ATSOFL1 Cpn60beta4 BGLU40 AT1G26790 AtHB23 AT1G27120 SPL11 AT1G27480 ATPUB45 AT1G28390 SRD2 AT1G28600 AT1G28610 AT1G28660 ARAB-1 AT1G29070 AT1G29660 AT1G29670 AT1G29700 AT1G29720 RKF1 AT1G29950 PDH-E1 ARF6 PSAK AAE14 UGT78D1 AT1G30600 AT1G30690 GlcNAc1pUT1 IMPL1 AK-HSDH PSAF FEI1 ATROPGEF14 AT1G31710 CYP97A3 ACBP AT1G31920 PRK ATNSI AT1G32160 ACT1 KAN2 PKp3 NRT1.5 AT1G32470 GBSS1 PRPL11 AT1G33110 AT-GTL1 AT1G33470 AT1G33600 AT1G33700 AT1G33811 ATSERK2 EMB3003 EMB2756 AT1G35340 AT1G35420 AT1G35560 RPL21C ACC1 AT1G36280 SHM7 ATNR2 PMI1 expressed protein localized to the inner membrane of the chloroplast. GAPB AtcFBP ATSDC1 CYCA1;1 CP22 ATMCM2 AT1G44920 AtBGAL5 BGLU1 ATTLL1 ABF2 Lhca5 5PTASE11 DYW1 AT1G48100 DGAT3 EMB3105 ACD1 RKL1 GATB AtPMEAMT AT1G49010 ACT8 AT1G49380 LACS2 AT1G49580 ATPREP2 AtCXE5 AT1G49740 PUB26 AT1G50120 FTSH1 AT1G50270 ATHX AT1G50380 SCL-3 POLGAMMA2 GDC1 AT1G51080 AT1G51110 AT1G51340 Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols. 4CL.1 ADOF1 AT1G51805 AT1G52220 PSAH-2 ATBG1 ATFPG-1 AT1G52510 AT1G52540 SPA4 FTM6 TCP3 mMDH1 AT1G53290 AT1G53430 ATMUM4 ATMPK18 AtFAP3 ATMSRB1 AT1G53900 ESP AT1G54050 AT1G54290 ABCD2 AT1G54500 ACP2 ATATG18H AtTLP18.3 AT1G54790 AT1G54820 ANP2 ATLOX1 AtIDD7 AT1G55260 AT1G55360 NDF5 ZKT CPN60B PSAG AT1G55690 UKL3 ATCSLE1 ATSERAT2;1 AT1G55960 HAC04 AT1G56050 AT1G56190 AT1G56210 ATDI19 ATNAS4 AT1G56500 AT1G57770 ATATP-PRT1 AT1G58170 AtHEMA1 SQE1 RXW8 CRR28 ARF1 AT1G59860 AT1G59970 AT1G60000 BGLU5 BGLU6 DHNS AT1G60590 ABC4 ATB2 AtNIK3 ACLA-2 ATRECQ4B AT1G61190 AT1G61300 LHCA3 AT1G61610 AT1G61660 AT1G61740 AT1G62170 AT1G62250 ACO2 FMO KAS AT1G62660 ATSCO1 AT1G62780 NRS/ER NRPD1 AT1G63640 AT1G64370 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AtGH9C2 LACS3 AT1G64500 AT1G64510 BDG1 AT1G64680 TUA1 NDF2 AMT1;2 RPOD1 G-TMT 4CL3 AT1G65070 AT1G65190 AT1G65220 AT1G65230 AtRLP10 ATHEX1 ATPAO4 FMO AT1G65870 cICDH GAD2 AT1G66080 AT1G66130 ZFP4 TMK1 ATGSR2 AtMYB20 AT1G66330 RGL AT1G66430 DIN9 RBCS1A AT1G67280 ATLOX6 EMB2814 AT1G67700 ATKCR1 PSBY ATFXG1 CSK AT1G67870 AT1G67950 ATHPR1 AtIDD14 AT1G68260 AT1G68400 CER6 PSRP3/1 AT1G68600 AT1G68660 AT1G68810 ATSOFL2 PHYLLO AT1G68940 BIM2 FLN2 AGO7 AtTCP15 HEMB1 CMT3 NRT1.7 AT1G70000 SNL4 EMB25 AT1G70200 ATCYCD1;1 AXY4 AT1G70280 PG2 ATBCA4 AT1G70480 AT1G70550 AOAT2 ABCB26 MMZ2 JAZ9 PGM2 CRR23 AT1G70770 AT1G70985 AT1G71070 AT1G71480 AT1G71710 AT1G71810 AT1G72230 AT1G72270 PSY1R AT1G72500 AT1G72810 EDA17 LPA3 AT1G73110 AT1G73170 AT1G73390 AT1G73450 AT1G73460 ATPIN1 AT1G73600 AT1G73650 AT1G73655 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. ATMPK15 AtEIL3 AT1G73740 BBX16 SPPA ENO1 AT1G74070 ATSOT18 ATSOT16 ATHSP101 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. IQD31 QKY AT1G74840 NDH-O ATKAS2 RPS9 emb2184 UMAMIT5 AtGH9B7 LQY1 ATCLV1 AtVAB1 ATCDSP32 PETE1 AT1G76110 AT1G76120 AMY2 sks5 CYCB2;4 AT1G76350 AT1G76450 AtHMGR1 AT1G76570 AT1G76880 ACR3 AT1G77090 AT1G77310 LACS9 LAX3 PIP5K2 AT1G78010 AT1G78040 AT1G78060 RAP2.4 ATTPPB ATGSTU20 ATGA2OX1 SPS1 ATSHB ATRHM1 ATTPS1 emb1473 ATGGH2 ATLUP1 AT1G78995 PSBR ECT8 APL AtkdsA1 PGK EMB1047 AT1G79600 AT1G79630 AT1G79640 RFO1 AT1G79720 ATNADP-ME4 CS17 AT1G80030 AT1G80640 NIP6 AT1G80850 AT1G80870 APG2 AT2G01210 MEE65 RPI2 RGA ARR14 AT2G01820 AHK4 BRL2 AtIDD5 STI AT2G02780 ATEXP15 AT2G03140 AT2G03390 AT2G03420 AT2G03750 AT2G03980 RNE LACS8 AT2G04378 AT2G04700 FLA7 EMB2761 AT2G05790 AT2G05920 ENR1 AtOPR3 EXGT-A1 AT2G07170 AT2G07689 AT2G13440 AtXYP2 MCM9 AKN1 AGP9 AT2G14910 AT2G15020 ARFB1A ATHNIR OTP51 KCS9 MCM4 ADC1 AT2G16750 AT2G17972 ATBZIP2 AT2G18630 SCY1 HY3 ATHMA4 SLP3 AT2G19940 ATCLASP ALE2 AAS AT2G20550 ATGLK1 ALF1 AT2G20725 LIP1 AtERF53 PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 XK-1 AT2G21380 AT2G21385 AT2G21560 ATRL2 AT2G21860 AT2G21960 CSI1 PLAT2 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT2G22230 ATIPS2 AAT AT2G22360 AGL22 IAA8 SCPL11 SCPL8 scpl10 AT2G23070 DEAR3 AT2G23360 AT2G23390 NAPRT2 ATMES7 ACL ATMES3 YCF37 AT2G23690 BLH4 AT2G23950 AT2G24020 AT2G24060 PRPL35 PDE319 AT2G24170 AT2G24230 ALDH11A3 AT2G24280 ATRPA2 AFR AT2G24580 AT2G25530 AtDBP1 AT2G25800 ESE2 AT2G25830 OVA4 AtGLDP2 AT2G26100 ATHSFA2 CYP711A1 FDH ER AT2G26500 ATDUF3 HO2 KCS11 AT2G26730 AT2G26800 ATCDPMEK AGO4 AT2G27060 LHW AT2G27290 AT2G27420 ATNLP1 AT2G27680 ADT3 CH-CPN60A ATFUC1 AT2G28200 DRB2 BGAL8 RAP2.7 AT2G28590 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 ALB3 ADCS ATRBL1 AT2G29180 AT103-1A TUB7 PY ANTR1 ATVLN1 AtFAD3 PBCP EMB3147 AT2G30320 ATFC-II ATC4H PSBW CYP71A13 ATCOQ3 FTSH2 ASKdZeta AT2G31040 TCP10 ATERF15 BBX25 ATNTH1 AT2G31670 AT2G31790 ATMYO5 ATGSL03 BAM6 ARASP MAPKKK17 AT2G32640 ATCB5-B ATCOP1 AtGH9B8 ATSUVH2 AtCLO3 PRPL28 AT2G33550 GALS1 AtCRL2 ATUBC24 EMB3113 AT2G34460 AtCCP1 AT2G34590 ABR ATHB-14 ATFAH1 EDA3 AT2G35050 AT2G35260 GDCH AT2G35390 AT2G35410 SKL2 FEI2 AT2G35640 ATCSLA07 ATERF38 AT2G35760 scpl26 AT2G35840 AT2G35880 BLH1 NHL12 ATE2FA AT2G36145 AT2G36200 AT2G36350 DML1 AT2G36570 AT2G36630 GAMMA-TIP AtXTH32 MAT3 AT2G36950 ATSIG6 ATPAL1 AT2G37050 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 UMAMIT13 UMAMIT12 AGD7 AS1 AT2G37660 CAC3 AtAUX1 PSRP4 PDX1L4 ATPDX1.1 ATSCAR2 RDO2 GAUT7 ATMVD1 PIP2;6 NATA1 ATMTP11 PnsL1 Encodes a Cysteine-rich peptide (CRP) family protein RCA CYT1 AT2G39850 ATISA1 LHCB4.3 AT2G40260 AT2G40400 HEME2 ATKT2 ETG1 CYP98A3 AT2G41050 AT2G41060 AT2G41130 ATCBK3 SSL2 ARR8 NTRC ATVLN2 AT2G41820 AGK1 AT2G41890 AT2G42130 AtSPL9 AT2G42220 ATBZIP34 AT2G42490 AT2G42510 ATPPC2 AT2G42690 AT2G42750 ATMPK20 ATPAO2 AT2G43030 ATLEUD1 BIO2 AT2G43500 Encodes a defensin-like (DEFL) family protein. AT2G43560 AT2G43590 FAB2 ACS1 AT2G43760 5PTase12 ATHOL1 MTHFR2 AT2G44230 BGLU26 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT2G44970 AT2G45180 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis AT2G45340 BEN1 ATPEX16 AT2G45870 ASK20 ATHH2 CYP86A8 AT2G45990 KPHMT1 AtSLD2 AT2G46250 SPA1 AtGH3.11 ARF11 AT2G46810 PSAP PIL1 PTI1-4 SPL1 AtGolS1 ATDUF5 CER8 AT2G47440 CAO ATMYB12 PHR2 AT2G47780 CRR6 DEG2 AT3G01060 AtCGS1 AtSS2 ATCFM2 PnsL3 ATHB-1 ATCYP38 AT3G01490 ATBCA1 ATPPT2 AT3G01810 AK3 ATKT4 scpl25 ATRGP1 AT3G02250 GAUT9 RAD23-3 MEE31 ATF1 AT3G02750 AT3G02820 PNT1 ATGSTF11 AtUGP1 PDE326 AT3G03770 ATMS2 emb2458 SDG31 IAA16 EMB3119 PDE181 ATWNK1 ATCYSD1 AT3G05180 ATN AT3G05350 RALFL22 Encodes a defensin-like (DEFL) family protein. AIF1 ATSK12 AT3G05900 AT3G06180 EMB3004 AT3G06410 ACLB-1 GATA15 AT3G06980 AT3G07270 AT3G07320 ATCSLC06 ATPUB9 SCPL27 AT3G08030 AT3G08600 AT3G08660 AT3G08680 ATPK1 LHCB4.2 AT3G09050 ATHY2 PTAC13 Fes1A AT3G09440 AT3G09540 ATPAH1 AT3G09580 CRM3 AT3G09730 ADK1 PIP5K9 OMR1 AT3G10060 AtLCY GYRB1 PAL4 SPD1 AHB2 ABCI6 AT3G10720 AT3G10840 LSF2 AtFAD7 AT3G11210 AT3G11470 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 ATHST AT3G12050 emb2738 ACT11 FAD2 AT3G12210 ATTBP2 ATHSP70 AGC1.5 PGK1 AT3G12930 AT3G13000 AT3G13040 ATSERAT2;2 AT3G13120 AT3G13180 AT3G13226 Cpn60beta2 ATKRS-2 AT3G13510 PUT4 CYP90D1 AT3G13740 BGAL1 AT3G14067 FLU AT3G14200 AT3G14205 ESM1 AT3G14220 AT3G14240 ATPME3 AT3G14330 SRF7 ATGSL04 ATMPK19 ATRHM3 AT3G14890 HEME1 IDM1 MEE35 PRPS20 SPL5 ATMT3 SPA3 ATHM4 AT3G15520 AT3G15550 AT3G15570 ADS3 MFP1 PSAH-1 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. EMB2083 ABCG29 AT3G16350 AT3G16370 JAL35 ATKINESIN-13A ATEBP AT3G16850 AAE7 LPD1 HCF107 ECT6 POK1 MAT4 ATCRSH CIPK1 HYH ATACP5 RLK902 NMT1 WOX1 NRPD2B EMB1270 EMB1865 AT3G18500 ATPUB29 ATWNK6 ACT2 AT3G18870 AtTic62 AT3G19000 ATPREP1 AT3G19370 PUB25 ATCAD4 AT3G19480 IKU2 BCAT4 CBB1 AT3G19850 AT3G20015 AT3G20230 AT3G20390 POLGAMMA1 AT3G20680 PSBTN AtBBX32 GluTRBP 4CL5 4CL2 GLTP3 ADOF2 UGT84A2 CYCP2;1 AT3G22150 ATWNK2 AT3G22520 ATTSO1 NET1A ELIP APS1 PKP-ALPHA ATSR2 ATCFM3A AT3G23090 bHLH34 AT3G23310 ATFAO3 ATPHO1 AT3G23510 AT3G23530 HGL1 AT3G23700 ATSAHH2 GAE6 ATTOPII AT3G23930 AT3G24190 HCF101 ALDH1A AT-HSFC1 PLSP1 AT3G24715 ICK3 GAUT8 ATFKBP62 AFH1 ATGHBDH AtNIK2 AT3G25570 AAPT2 AT3G25660 AtCHUP1 AT3G25700 AOC1 AOC2 AT3G25805 LTA2 RPL15 ATPRX AT3G26450 GAMMA-TIP2 ORF02 GAPA ATSNM1 AT3G26700 CCB1 ATICE1 ATSKL1 DRB3 ATTSO2 GHS1 LHCB2 ATMDAR4 RPL12 RPL12-C AT3G28040 UMAMIT47 AT3G28200 AT3G28220 AT3G28460 ABCB19 AT3G29185 ATCM1 AT3G42660 CHR38 AAO2 LTPG2 ATGSTU27 ATJ ATNIT1 AT3G44620 RPL9 AtXTH31 scpl48 AT3G45160 JK224 AT3G45900 ATMYB48 AT3G46370 PTAC16 DUT1 AT3G47070 ATPLC8 PEX11B ATSMC2 CAB4 AT3G47580 PYE AT3G47650 PUB39 AT3G47830 ATATM AT3G48200 CEP3 AT3G48420 AT3G48460 AHAS DCF GSA2 AT3G49000 AT3G49340 BAM2 ATBCAT-3 AT3G49810 ARLA1C AT3G49880 OBP1 CRK ICK2 AT3G50685 BEH1 OEC33 AtHB28 SRS1 GATA6 AT3G51090 AT3G51140 GMD2 F3'H AT3G51280 ATSSL4 AT3G51510 LTP5 ATWNK5 IMK2 ATG4 AT3G51950 PSRP2 CP33 AT3G52500 AT3G52740 FTSZ2-2 BGAL2 KIPK ELL1 AT3G52960 AT3G53100 CYP97C1 ATPAL2 AT3G53380 AtPIP2;1 AT3G53680 PYRR AT3G53960 HCEF1 ATPTR1 AT3G54210 TBL36 AT3G54290 AT3G54390 AT3G54400 ATGR2 SETH3 LHCA1 ATGRXCP PMR6 PLA PGPS2 GSTL2 A11 PDE329 PPL1 ATTSC13 OVA1 P5CS2 ATDFD SBPASE ESK1 AT3G56010 UGP3 AT3G56060 IMK3 AT3G56290 AT3G56370 AT3G56680 AT3G56760 AT3G56870 PSRP5 ACSF AT3G57020 AT3G57030 AT3G57060 AT3G57070 BPG2 PrfB3 AT3G57220 AGL16 AT3G57400 ATVLN3 AT3G57800 AT3G57830 SPL15 GIS ATWRKY69 GAUT15 IPMI1 AT3G59040 PIF5 GUN4 ACR4 AT3G59780 MTHFR1 AT3G60320 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. HAT3 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. CDS5 AT3G60750 MAP65-4 AT3G61080 GAUT1 HD-GL2-1 SDR1 ATPIP1 ARATH;BSAS3;1 AT3G61490 AtSLD1 ATX3 AT3G61820 AT3G61870 CYP20-3 AT3G62110 CP12 AT3G62570 ATMYB11 BGLU8 APG3 ATIPT3 CYCP1;1 CSP41A OEP6 AtFAP1 AtcpRRF PLA ATMRK1 AT3G63340 OTP86 APG1 EMB3126 AT3G63510 ATCCD1 BB BRCA2(IV) UNE10 AT4G00165 YAB3 EDA8 RLK4 ATT1 ANTR2 FDM2 AtGPAT8 AT4G00560 NAD-ME2 ASKTHETA AHDP QUA3 AT4G00870 AT4G00895 MEE47 CRK41 TROL GT72B1 MGP4 AT4G01310 AT4G01460 ABC1 HEMG1 AtSAM2 ATGPAT3 MCM7 AT-RSH1 AT4G02410 ATXT2 AT4G02530 AT4G02630 EOL1 PSAD-1 EMB3129 AtRBP-DR1 AFB1 XTH9 AT4G03260 PETC ATHM2 AT4G04340 EMB2369 APR ATPC1 CPK27 ATKEA3 PDF2 AT4G05090 AtMYB74 PSBQ ATK5 Encodes a putative glycosyl hydrolase family 10 protein (xylanase). ORL1 ARGAH2 APX4 AT4G09040 CRRJ A/N-InvI AT4G09630 ATPD AT4G10060 ATSPS4F ATDET1 AT4G10300 LHCB5 AT4G10390 AT4G11100 SPA2 AT4G11175 AT4G11320 ATMPK5 AT4G11570 BASS5 Hop3 SKU5 FLA2 PSAL AT4G12830 scpl20 EPFL9 AT4G13050 SDG22 AT4G13540 AT4G13550 CYP83A1 AT4G13840 SHM4 ATSAHH1 The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. KINESIN-12A PDE226 AT4G14330 AT4G14360 bHLH104 ATECI3 NF-YB3 CIPK4 APS3 ELIP2 ATTCX2 TUA6 CYP97B3 ATCCT2 AT-BETA-AMY AT4G15430 UGT84A1 AT4G15545 IAGLU AtCLA1 AT4G16141 PHYD SPK1 ATOPT3 CLPR4 AtBAM3 AT4G17180 ATRAB1C AT4G17560 LIL3:1 AT4G17650 AT4G17740 ATTPS5 AT4G17810 MYC4 APRR2 AT4G18030 PHYE ATSS4 DEG5 TCP2 CH-42 ATWL4 AT4G18740 AT4G18810 AT4G18820 AT4G18970 CMT2 CCD4 AT4G19460 Encodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death. AK-HSDH ATPP2-A1 AAH PTAC14 BAM3 ATRAB8D AT4G20760 ATFAH2 GHR1 PyrD AT4G21060 ATRP1 PSBQ B120 ATM4 AT4G21650 ATML1 BGLU47 AT4G21770 PRXR1 sks4 AKT2 AT4G22290 CYP706A2 AT4G22730 ATSMO1-2 PGR5-LIKE CRK21 CRK22 PIP1;5 AT4G23670 AT4G23740 CRF2 AT4G23820 CRR31 ATCSLG3 ATCSLG1 cpHsc70-1 AT4G24350 CER2 AGL24 PGI ATHB22 TAR2 AT4G24750 AT4G24760 ATRBP31 AT4G24790 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) AT4G24930 AT4G25030 ACP4 CHLM MSRA4 OTP70 AT4G25280 AT4G25290 ATDTX35 B1 CGA1 AtFBA7 AtFBA5 AT4G26540 AT4G26555 AGC1-2 AtWRKY20 AT4G26650 GDPDL3 AT4G26710 MAP65-2 AT4G26790 VTC2 AT4G26860 AT4G26940 FAD4 AT4G27130 ATK2 AT4G27240 AT4G27300 CIP7 AT4G27435 AtENODL2 AT4G27560 NARA5 BGLU9 AT4G28080 AT4G28180 AT4G28360 AT4G28480 PSB28 AT4G28706 AT4G28740 PSAE-1 AT4G28780 emb2726 IAA27 AT4G29100 AT4G29120 ATHXK1 PFK1 ACHT2 AT4G29920 AT4G30020 AT4G30180 AHA2 VEL1 AR2 GAE1 AT4G30470 SARK GGP1 BRS1 scpl29 ASHR3 AtLAP2 FAD6 ATCIPK6 AT4G31310 ACDO1 AT4G31530 HCF153 EMB2797 PGR3 AT4G32000 PDE334 AT4G32330 AtCESA1 LUG AT4G32590 ATSDX1 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHB-8 ATH1 AtGLDP1 AT4G33080 AT4G33110 FAB1A AT4G33440 ATHDA14 AT4G33500 AtHMAC6 KUP5 ATBCA5 AT4G33740 AT4G33760 ATOST1 CCoAOMT1 AT4G34090 SEP1 AT4G34220 ALDH3 CLB6 ATCAP1 BLH6 SSR16 ERG9 SQS2 ATVHA-C1 AT4G34730 ASE2 MRL1 AT4G34920 SLP2 AtMYB32 CAT2 HCF244 AT4G35270 AT4G35335 XCP1 AFT MCA1 AT4G36180 CYP84A1 GATA7 ALDH3F1 BGAL3 AT4G36390 AT4G36530 BEE2 ATRL3 AtPLT6 AtGGPPS11 BLH2 ACD2 CYP81F3 ANT SQE3 XTH7 SHM1 ATCAD6 ATCAD7 pde191 AQI ATROPGEF1 AtVAB2 AT4G38520 ATMYB4 AT4G38690 ROC1 ATPRP4 AtFBA2 AT4G39040 VHA-A3 SHL1 AT4G39150 ATSEC14 APL3 ATCAD9 ATCESA2 SAMC1 ATSK2 AT4G39630 FKBP16-2 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. ATIPS1 AKN2 CYP79B2 AT4G39960 AT4G39970 DHS1 AT5G01020 LAC8 AT5G01075 AT5G01090 SQD2 AT5G01260 ATPDX1 AIRP2 LHCB4.1 AT5G01590 AT5G01890 STN8 AT5G02160 Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ATMTRNASEII ABCI20 AT5G02370 MT2B PLL2 AT5G02460 AT-HSC70-1 AT5G02710 AT5G02940 iqd2 AT5G03140 ATRAB AtNCS1 SBE2.2 AT5G03870 AT5G03880 54CP GYRB2 FD-GOGAT ATPAL3 ATLDA BTR1 KCS19 SIR ACR12 ATOFP13 NOL ATNAS1 AT5G04980 RUL1 ATCESA3 AT5G05180 AtCHIL AtFAD8 ATEGY2 AT5G05790 UGT76C2 ATROPGEF5 2-Cys ATNUDX27 TBR HAT14 AT5G07020 AT5G07030 ERL2 ATMSRA2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ATMYB29 CYP75B1 AT5G08050 TCP17 BIM1 ATAIH scpl35 AT5G08390 FTRA2 AT5G08415 AT5G08430 PDE340 ATFLS1 AT5G08650 AAP2 AtSRT2 PI-4KBETA2 AtPPa6 PMDH2 ATBX3 CESA5 PROPEP5 AT5G10020 ATMIPS3 AST68 ASN3 PAS2 AIL6 AT5G10605 AT5G10690 AT5G10770 CIPK5 AT5G10960 AT5G10970 ATSPS2F HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 TINY2 ATNADP-ME2 AT5G12110 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 DiT1 AT5G12970 ATGSL12 ATCYP20-2 AT5G13140 CRN AT5G13410 IQD11 EMB3136 ABAR ATPDAT SVR3 SIG4 CCS52B ATCHS AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 AT5G14210 EMB3137 AT5G14410 AT5G14460 AT5G14500 ATSK13 ATDEF2 AT5G14700 BETA AO AT5G14910 AT5G14970 AT5G15070 GASA4 AtENODL17 AT5G15390 APG6 GAUT14 BCCP2 LNG1 AtbZIP3 AT5G15910 AT5G15950 AtNIK1 AT5G16240 VAT1 BCCP ATF2 LRR1 AtMYB43 DHAR3 EMB2247 AT5G16720 AT5G16810 UGT78D2 ENH1 PSY AtUGP2 MEX1 AT5G17660 AT5G17670 EMB1241 PSRP6 ATCIMS AT5G18140 anac088 ATSRA1 AT5G18500 AT5G18550 ATOBGC AT5G18600 PCB2 BAM9 EMB3013 NSH3 BUD2 ADG2 AT5G19290 AT5G19730 AT5G19760 AtRbcX2 AT5G19940 AT5G20050 AtHBP5 ATMGD2 ATBRXL4 AT5G20700 ATCPN21 AT5G20885 CRR42 AT5G21100 AT5G21105 AT5G21222 CIPK26 ATCKX5 ATHMA8 AT5G22020 UBP8 anac089 AT5G22340 AT5G22850 IMS3 CaS HCF136 AT5G23170 SCPL34 AT5G23280 HMGB6 AT5G23480 AT5G23820 TUB8 AT5G24010 SLAH3 ATSIG5 SQE5 AT5G24155 ATSS1 AT5G24320 PGL5 LSU2 CRY3 AT5G25590 BGLU37 AtTGG1 AT5G26330 PYR6 AT5G27560 ATCYSD2 DES1 ATNEK3 AT5G28300 AT5G28500 GME ARRPS1 AT5G34930 AT5G35170 AMOS1 CAC2 ATGSL1 AHK2 AT5G35970 atylmg3 AT5G36160 ATPRFB AT5G36230 CAT3 AT5G37010 ARF8 ARLA1A AT5G37790 RBCS3B RBCS2B RBCS1B AT5G38510 AT5G38520 CRR7 UDG4 AHP3 ORTH1 DEG8 AT5G40140 CRK42 RS5 AT5G40450 AT5G40500 GPDHp RPL27 DRB5 ATUBC8 AT5G41760 AT5G42070 ATBG_PPAP FTSH5 AT5G42620 AOS AT5G42720 ATIPK1 AT5G43150 SPL2 TZP NDH18 KCS20 AT5G44020 ABCI21 ATGLK2 TUB4 AT5G44520 AT5G44530 MCM6 AT5G45280 AT5G45290 BAM8 AT5G45650 AT5G45670 ATFKBP13 AT5G45720 CIPK20 CHL AtNUDT11 AT5G45950 APE2 AtLARP6a KAS1 AT5G46390 AT5G46420 BSK2 AT5G46580 bHLH071 TET1 PYL1 ATNIG1 AT5G46910 Encodes the mitochondrial ATP synthase subunit delta. LON2 LIL3:2 AT5G47190 AT5G47390 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT5G47620 NF-YB2 FPS1 GAUT4 FRA1 AMK2 AT5G48220 AACT2 ADG1 AT5G48360 HINT3 ATFKBP65 AT5G48590 ATCAP-C AT5G48790 KAT5 LPA66 HCT OVA2 DDM2 AT5G49215 ATMYB111 ACLB-2 XIP1 ATGH9A1 cpHsc70-2 ATPPOX AT5G50000 AT5G50100 AT5G50110 AT5G50180 OLD5 AT5G50370 CAA33 AT5G51110 AT5G51140 ATTPPA LPA2 AT5G51560 At-NEET ATPGMP AT5G52010 CRR1 AT5G52190 EFO1 SCL8 B2 ATHS83 AT5G52660 AT5G52780 ATWRKY27 AT5G52960 AT5G52970 AT5G53140 FTSH11 AT5G53340 ORG1 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 AT5G53750 AtPSKR2 TAT7 ATOMT1 PTAC15 AHL CRLK1 RPL24 THI1 VTC5 AT5G55180 AT5G55220 ATMAP65-1 AtIAMT1 GDPDL4 ATKCO1 CRR21 AT5G55950 AtHsp90-3 AtHsp90.2 AT5G56040 ATPEX5 AT5G56590 ILL1 AT5G56790 AT5G56840 AT5G56850 GATA21 AT5G56890 NAP1;3 LUT2 CIA2 PSD2 AHA3 BIO1 AT5G57610 CER3 ADCL APO2 NPL1 AT5G58150 NdhN AT5G58330 AT5G58520 AT5G58540 EOL2 FOLK ATPLC5 DDB2 AtcPT4 ftsh9 AT5G58950 AT5G59130 ATUXS3 AT5G59610 AtVIP2 AT5G60270 LecRK-I.9 ARF4 ATPDX2 CLB4 ATMYB34 COB PNM1 PDCB1 PIF7 AT5G61350 EMB2728 AtMYB28 AT5G61570 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AtTudor2 ARF1-BP AT5G62210 ATGT18 AT5G62350 CDF1 AHA11 AT5G62710 DXR AT5G62840 AT5G62930 BT1 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AT5G63410 ATFLS2 SNRK2-5 AT5G63700 AT5G63710 SHA1 AtBGAL10 AT5G63940 ALX8 PSAN DCT ATGCH JK218 EMB3144 CESA6 ASN2 ATPUB38 AT5G65220 ATHB-5 KAC2 BAM1 XTH6 CGR3 STR16 ATLFNR1 AT5G66230 AT5G66470 AT5G66520 AT5G66530 MSP-1 ENY AT5G66770 ABA1 ICU2 EPS1 TOE3 AT5G67200 IRX15-L ATEB1C RLK ARA12 PSBA MATK RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 RPS14 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBF PSBE ORF31 PETG PSAJ RPS18 RPL20 CLPP1 PSBB PSBT PSBN PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 RPL2.1 RPL23 NDHB.1 RPS7 NDHF YCF5 NDHD NDHE NDHG NDHI NDHA RPS15 RPS7.2 NDHB.2 RPL23.2 RPL2.2 RPL16 ATP6 NAD5
GO:0044710 single-organism metabolic process	BP	1.365e-158	AT1G01080 PDH-E1 KCS1 AtFKGP ATFRO2 ATGPAT4 PIP1;3 AT1G01630 GAE2 AT1G02110 AT1G02150 CER1 AtSAM1 ATCSLD5 AtD27 FZL AtBE2 2A6 POR ATHM1 AT1G04040 KCS2 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT1G04420 AT1G04430 LIP2 AT1G04680 TOR2 ATGTF2H2 AT1G05150 AT1G05170 emb2394 LPA19 UGT1 5PTASE13 ATCTL1 encodes a flavonol-7-O-rhamnosyltransferase involved in the formation of rhamnosylated flavonols BBX24 RHON1 ATGSL07 AT1G06550 HPD encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase OE23 AT1G06690 AT1G06730 AtSLP1 ATF2KP ATNDI1 AT1G07280 EMB2784 ATPCNA1 AT1G07440 KCS3 AXS2 ADT6 AT1G08280 PSAO FATB ALB-1V ABC1 AVDE1 ATSYP111 ACHT4 AT1G09310 CRB AT1G09440 iPGAM1 AtHIR1 ATBCAT-1 ATGSTU18 ATGSTU17 ACLA-1 AT1G10740 AT1G10900 ATFD1 ATSS3 CLPP6 ADT1 ATGLX1 AT1G11860 ATSRS Encodes a protein that appears to have 1-amino-cyclopropane-1-carboxylic acid oxidase activity based on mutant analyses. AT1G12080 ELP ATNRT1 AT1G12244 PHR1 AT1G12570 AT1G12800 AFB3 GAPA-2 CYP71B2 ORP1D GATL3 AOC4 AT1G13650 AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 AT1G14190 AT1G14270 SBH2 AT1G14345 ADL1C PSS1 AT1G15140 AT1G15410 CYCA2;3 AT1G15710 CP24 FDM1 ATCCR1 NDF1 ADAP AT1G16080 CYP79F2 BUS1 ATMYB58 AT1G16680 UP6 SPS2 AtHBP1 FUG1 GLYR2 AT1G18060 ATMPK8 AT1G18440 AT1G18460 ATSOT17 AT1G18660 NDF6 AT1G19140 LHCA2*1 KCS4 AT1G19600 JMT ATCLH1 AT1G19710 ARF5 TUB5 ATLFNR2 ARAC4 CVP1 DRT112 AT1G21350 AT1G21440 ATNADK2 AT1G21670 LYM1 ATPIP5K1 AT1G22170 AT1G22430 AT1G22630 AT1G22850 AOAT1 AOR UGT74B1 ASB1 CER60 AT1G26190 Cpn60beta4 AT1G27120 ATGSTU13 AT1G27480 AT1G28600 AT1G28610 AT1G28660 ARAB-1 AT1G29660 AT1G29670 AT1G29700 PDH-E1 PSAK AAE14 UGT78D1 AT1G30690 AT1G30760 GlcNAc1pUT1 IMPL1 AK-HSDH PSAF FEI1 ATROPGEF14 AT1G31710 CYP97A3 ACBP PRK ATNSI ACT1 PKp3 NRT1.5 AT1G32470 AT1G32780 GBSS1 PRPL11 AT1G33110 AT-GTL1 AT1G33600 AT1G33700 AT1G33811 EMB3003 EMB2756 AT1G35420 RPL21C ACC1 AT1G36280 SHM7 ATNR2 SKS6 PMI1 expressed protein localized to the inner membrane of the chloroplast. GAPB AtcFBP ATSDC1 CYCA1;1 CP22 ATMCM2 AT1G44920 AtBGAL5 ATTLL1 5PTASE11 mtLPD1 DGAT3 ACD1 GATB AtPMEAMT ACT8 AT1G49380 LACS2 AtCXE5 AT1G49740 FTSH1 AT1G50270 ATHX AT1G50450 GDC1 AT1G51110 AT1G51340 Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols. 4CL.1 PSAH-2 ATBG1 ATFPG-1 SPA4 TCP3 mMDH1 AT1G53290 ATMUM4 AtFAP3 ATMSRB1 ESP ABCD2 AT1G54500 ACP2 ATATG18H AtTLP18.3 AT1G54790 ATLOX1 AT1G55260 AT1G55360 NDF5 ZKT CPN60B PSAG UKL3 ATCSLE1 ATSERAT2;1 AT1G55960 AT1G56050 AT1G56190 AT1G56210 ATNAS4 AT1G56500 AT1G57770 ATATP-PRT1 AT1G58170 AtHEMA1 SQE1 RXW8 ARF1 AT1G60000 DHNS ABC4 ATB2 ATRECQ4B ATFD2 LHCA3 APR2 AT1G62250 ACO2 FMO KAS AT1G62660 ATSCO1 AT1G62780 NRS/ER NRPD1 AT1G63640 LACS3 BDG1 TUA1 NDF2 AMT1;2 CYP89 G-TMT 4CL3 AT1G65070 AT1G65230 AtRLP10 AT1G65560 ATPAO4 FMO AT1G65870 cICDH GAD2 AT1G66130 ATGSR2 AT1G66330 RGL AT1G66430 AT1G66540 DIN9 RBCS1A AT1G67280 ATLOX6 EMB2814 AT1G67700 ATKCR1 PSBY ATFXG1 AT1G67950 ATHPR1 AT1G68080 AT1G68260 CER6 PSRP3/1 AT1G68600 PHYLLO BIM2 FLN2 AGO7 AtTCP15 HEMB1 CMT3 NRT1.7 ATCYCD1;1 AT1G70280 PG2 ATBCA4 AT1G70480 AT1G70550 AOAT2 ABCB26 MMZ2 JAZ9 PGM2 CRR23 AT1G70770 AT1G70985 AT1G71070 AT1G71480 AT1G71500 AT1G71695 AT1G71710 AT1G72230 AT1G72270 AT1G72500 AT1G72810 EDA17 LPA3 AT1G73110 AT1G73170 ATPIN1 AT1G73600 AT1G73650 AT1G73655 AtEIL3 AT1G73740 ENO1 AT1G74070 ATSOT18 ATSOT16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NDH-O ALDH10A8 ATKAS2 emb2184 UMAMIT5 AtGH9B7 LQY1 AtVAB1 ATCDSP32 PETE1 AT1G76110 AT1G76120 AMY2 sks5 CYCB2;4 AT1G76450 AtHMGR1 AT1G76570 ACR3 AT1G77090 LACS9 LAX3 PIP5K2 AT1G78040 ATTPPB ATGSTU23 ATGSTU20 ATGA2OX1 CYP708A3 SPS1 ATRHM1 ATTPS1 ATGGH2 ATLUP1 PSBR ECT8 AtkdsA1 PGK ATNADP-ME4 CS17 AT1G80030 NIP6 AT1G80850 APG2 AT2G01210 RPI2 RGA CRR3 ARR14 AHK4 PQL3 AT2G03390 AT2G03420 AT2G03980 RNE LACS8 AT2G04700 FLA7 EMB2761 PGR5 AT2G05920 ENR1 AtOPR3 EXGT-A1 AT2G07170 AT2G07689 AT2G13440 AtXYP2 AKN1 AGP9 AT2G14910 AT2G15020 ATHNIR KCS9 MCM4 ADC1 HY3 ATHMA4 AT2G19650 AT2G19940 ATCLASP AAS ATGLK1 ALF1 LIP1 PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 XK-1 AT2G21385 AT2G21830 AT2G21860 AT2G21960 CSI1 PLAT2 AT2G22230 ATIPS2 AAT AT2G22420 AGL22 SCPL8 CYP96A1 AT2G23360 AT2G23390 NAPRT2 ATMES7 ACL ATMES3 YCF37 AT2G24020 AT2G24060 PRPL35 SDR2 ALDH11A3 AT2G24280 ATRPA2 AFR AT2G24580 ATGPX1 AT2G25530 AT2G25830 OVA4 AtGLDP2 AT2G26100 ATHSFA2 CYP711A1 FDH ER ATDUF3 HO2 KCS11 AT2G26730 AT2G26800 ATCDPMEK AGO4 AT2G27290 AT2G27680 ADT3 DRB2 AT2G28620 ALB3 ADCS ATGSTU6 AT103-1A TUB7 PY ANTR1 ATVLN1 AtFAD3 EMB3147 ATFC-II ATC4H CYP71A13 ATCOQ3 FTSH2 AT2G31040 TCP10 BBX25 ATNTH1 AT2G31670 AT2G31790 ATGSL03 BAM6 AT2G32640 ATCB5-B ATCOP1 ATSUVH2 AtCLO3 PRPL28 GALS1 AtCRL2 ATUBC24 AT2G34060 AT2G34460 AT2G34590 ABCC2 ATHB-14 ATFAH1 EDA3 AT2G35050 AT2G35260 GDCH AT2G35390 AT2G35410 SKL2 FEI2 ATCSLA07 AT2G35760 AT2G35840 AT2G35880 BLH1 NHL12 ATE2FA AT2G36145 AT2G36200 DML1 GAMMA-TIP MAT3 AT2G36950 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 UMAMIT12 AGD7 AT2G37660 AKR4C10 CAC3 AtAUX1 PSRP4 PDX1L4 ATPDX1.1 ATSCAR2 GAUT7 ATMVD1 PIP2;6 NATA1 ATMTP11 PnsL1 RCA CYT1 ATISA1 AT2G40400 HEME2 ATKT2 ETG1 CYP98A3 AT2G41050 SSL2 ARR8 NTRC ATVLN2 AGK1 AT2G42130 AT2G42220 AT2G42490 ATPPC2 AT2G42690 ATPAO2 AT2G43030 ATLEUD1 BIO2 Encodes a defensin-like (DEFL) family protein. AT2G43560 FAB2 ACS1 5PTase12 ATHOL1 MTHFR2 BGLU26 CHL-CPN10 AT2G44920 AT2G44970 AT2G45180 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis BEN1 CYP76C1 ATPEX16 AT2G45870 ATHH2 CYP86A8 AT2G45990 KPHMT1 AtSLD2 SPA1 AtGH3.11 PSAP SPL1 AtGolS1 CER8 CAO PHR2 AT2G47780 CRR6 DEG2 AT3G01060 AtCGS1 AtSS2 PnsL3 ATHB-1 ATCYP38 ATBCA1 ATPPT2 AK3 ATKT4 ATRGP1 AT3G02250 GAUT9 RAD23-3 ATF1 AT3G02750 ATGSTF11 AtUGP1 PDE326 AT3G03770 ATMS2 SDG31 EMB3119 PDE181 ATCYSD1 AT3G05180 ATN RALFL22 Encodes a defensin-like (DEFL) family protein. AIF1 EMB3004 GATA15 AT3G06980 AT3G07270 ATCSLC06 AT3G08030 AT3G08680 LHCB4.2 AT3G09050 ATHY2 PTAC13 AT3G09440 ATPAH1 AT3G09580 CRM3 AT3G09730 ADK1 PIP5K9 OMR1 ATDFC AtLCY PAL4 AHB2 ABCI6 AT3G10720 LSF2 AtFAD7 AT3G11210 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 ATHST ACT11 FAD2 AT3G12210 ATTBP2 PGK1 AT3G12930 AT3G13040 ATSERAT2;2 AT3G13120 AT3G13226 ATKRS-2 PUT4 CYP90D1 BGAL1 AT3G14067 FLU AT3G14205 ESM1 AT3G14220 ATPME3 ATGSL04 CYP72A11 CYP72A15 ATRHM3 HEME1 IDM1 AT3G15090 PRPS20 ATHM4 AT3G15520 AT3G15550 AT3G15570 ADS3 MFP1 NDF4 EMB2083 ABCG29 AT3G16370 JAL35 AAE7 LPD1 HCF107 ECT6 MAT4 ATCRSH ATACP5 NMT1 EMB1270 AT3G18210 EMB1865 AT3G18500 ACT2 AT3G19000 ATPREP1 ATCAD4 AT3G19480 BCAT4 CBB1 CYP705A21 AT3G20390 POLGAMMA1 AT3G20790 GluTRBP 4CL5 4CL2 GLTP3 ADOF2 UGT84A2 AT3G22520 ATTSO1 ELIP APS1 PKP-ALPHA AT3G23090 bHLH34 ATFAO3 ATPHO1 AT3G23510 AT3G23530 AT3G23700 ATSAHH2 GAE6 ATTOPII HCF101 ALDH1A AT-HSFC1 PLSP1 ICK3 GAUT8 AFH1 ATGHBDH AAPT2 AT3G25660 AtCHUP1 AOC1 AOC2 AT3G25805 LTA2 ATPRX CYP71B22 CYP71B34 CYP71B35 CYP71B36 AT3G26450 GAMMA-TIP2 ORF02 GAPA ATSNM1 CCB1 ATICE1 ATSKL1 DRB3 ATTSO2 ATMDAR4 UMAMIT47 AT3G28200 AT3G28220 AT3G28460 ABCB19 AT3G29185 ATCM1 AT3G42660 AAO2 LTPG2 ATGSTU27 ATNIT1 AtKIN14h RPL9 AT3G44970 AT3G45160 AT3G45900 PTAC16 DUT1 ATPLC8 PEX11B ATSMC2 CAB4 AT3G47650 AT3G47830 ALDH2 ATATM AT3G48200 CYP71A25 AT3G48420 AT3G48460 AHAS DCF GSA2 AT3G49220 DIN11 BAM2 ATBCAT-3 ARLA1C ICK2 AT3G50685 OEC33 AT3G51090 AT3G51140 GMD2 F3'H AT3G51280 AT3G51510 LTP5 ATG4 PSRP2 CP33 AT3G52500 ACA1 FTSZ2-2 BGAL2 ELL1 AT3G53100 CYP97C1 ATPAL2 CYP71B5 AtPIP2;1 PYRR AT3G53960 HCEF1 ATPTR1 AT3G54210 AT3G54290 AT3G54400 ATGR2 SETH3 ATGRXCP PMR6 PLA PGPS2 GSTL2 A11 PDE329 PPL1 ATTSC13 OVA1 P5CS2 ATDFD SBPASE AT3G56010 UGP3 AT3G56060 AT3G56290 CYP94D2 AT3G56680 AT3G56870 PSRP5 ACSF AT3G57060 PrfB3 AT3G57220 ATVLN3 ATWRKY69 GAUT15 IPMI1 AT3G59040 PIF5 GUN4 AT3G59780 MTHFR1 AT3G60290 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. CDS5 AT3G60750 MAP65-4 AT3G61080 GAUT1 SDR1 ATPIP1 ARATH;BSAS3;1 AtSLD1 AT3G61870 CYP20-3 CP12 ATMYB11 APG3 ATIPT3 CSP41A OEP6 AtFAP1 AtcpRRF PLA APG1 EMB3126 AT3G63510 ATCCD1 BRCA2(IV) ATT1 ANTR2 FDM2 AtGPAT8 AT4G00560 NAD-ME2 AT4G00895 TROL GT72B1 MGP4 AT4G01310 ABC1 HEMG1 AtSAM2 ATGPAT3 MCM7 AT-RSH1 ATXT2 AT4G02530 EOL1 PSAD-1 EMB3129 AT4G02940 AFB1 PETC ATHM2 AT4G04340 EMB2369 APR ATPC1 ATMSRB6 AT4G05090 AtMYB74 ATK5 Encodes a putative glycosyl hydrolase family 10 protein (xylanase). ARGAH2 APX4 A/N-InvI AT4G09630 ATPD AT4G10060 ATSPS4F ATDET1 AT4G10300 LHCB5 AT4G10390 SPA2 ATMPK5 AT4G11570 BASS5 CYP706A5 CYP706A6 SKU5 FLA2 AT4G13050 SDG22 AT4G13550 CYP83A1 AT4G13840 SHM4 ATSAHH1 The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. KINESIN-12A PDE226 AT4G14330 AT4G14360 ATECI3 APS3 ELIP2 TUA6 CYP97B3 ATCCT2 AT4G15545 IAGLU AtCLA1 AT4G16155 SPK1 ATOPT3 CLPR4 AtBAM3 AT4G17560 LIL3:1 AT4G17650 AT4G17740 ATTPS5 MYC4 AT4G18030 ATSS4 CH-42 AT4G18970 CCD4 AT4G19460 AK-HSDH AAH PTAC14 BAM3 ATRAB8D AT4G20760 AT4G20820 AT4G20840 ATFAH2 PyrD AT4G21060 ATRP1 B120 MSRB2 PRXR1 APR3 sks4 AKT2 CYP706A1 CYP706A2 ATSMO1-2 PGR5-LIKE PIP1;5 AT4G23670 ATCSLG3 ATCSLG1 AT4G24350 CER2 PGI ATHB22 TAR2 AT4G24750 ATRBP31 AT4G24930 AT4G25030 ACP4 CHLM MSRA4 AT4G25280 AT4G25290 AT4G25600 B1 AT4G25830 CGA1 AtFBA7 AtFBA5 AT4G26555 AT4G26650 GDPDL3 AT4G26710 MAP65-2 AT4G26790 VTC2 AT4G26860 AT4G26940 FAD4 ATK2 CIP7 AT4G27435 AtENODL2 NARA5 AT4G28080 PSB28 AT4G28706 AT4G28740 PSAE-1 AT4G28780 emb2726 AT4G29120 ATHXK1 PFK1 ACHT2 ATPAO5 AT4G30020 AHA2 VEL1 AR2 GAE1 AT4G30470 SARK GGP1 PDE327 ASHR3 FAD6 AT4G31310 ACDO1 AT4G31530 HCF153 EMB2797 PGR3 ATGPX7 PDE334 APX6 AT4G32330 AtCESA1 LUG AT4G32590 ATSDX1 ATH1 AtGLDP1 AT4G33110 FAB1A ATHDA14 AT4G33500 AtHMAC6 KUP5 ATBCA5 AT4G33740 AT4G33760 CER4 ATOST1 CCoAOMT1 AT4G34090 SEP1 ALDH3 CLB6 ATCAP1 SSR16 ERG9 SQS2 ATVHA-C1 ASE2 MRL1 AT4G34920 SLP2 APX3 CAT2 HCF244 AT4G35335 XCP1 AFT MCA1 AT4G36180 CYP84A1 ALDH3F1 BGAL3 AT4G36390 AT4G36530 AtPLT6 AtGGPPS11 ACD2 CYP81H1 CYP81D5 CYP81D4 CYP81F3 SQE3 XTH7 NDH-M SHM1 ATCAD6 ATCAD7 AQI ATROPGEF1 AtVAB2 ATMYB4 AT4G38690 ROC1 ATPRP4 AtFBA2 AT4G39040 VHA-A3 SHL1 ATSEC14 APL3 ATCAD9 ATCESA2 SAMC1 CYP96A12 ATSK2 AT4G39630 ATIPS1 AKN2 CYP79B2 AT4G39970 DHS1 AT5G01020 LAC8 AT5G01090 SQD2 AT5G01260 ATPDX1 AIRP2 Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ABCI20 AT5G02370 MT2B AT-HSC70-1 AT5G02940 iqd2 AtNCS1 SBE2.2 54CP FD-GOGAT ATPAL3 ATLDA KCS19 SIR ACR12 NOL ATNAS1 AT5G04980 ATCESA3 AT5G05180 AtCHIL AtFAD8 ATEGY2 UGT76C2 2-Cys ATNUDX27 TBR AT5G07020 ERL2 ATMSRA2 ATMYB29 AT5G07800 CYP75B1 AT5G08050 FTRA2 AT5G08415 AT5G08430 PDE340 ATFLS1 AT5G08650 NDC1 PI-4KBETA2 AtPPa6 PMDH2 ATBX3 CESA5 PROPEP5 ATMIPS3 AST68 ASN3 PAS2 CYP81K2 AT5G10690 ATSPS2F HY5 PPD5 AtMYB3R4 ATNADP-ME2 AT5G12110 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 DiT1 AT5G12970 ATGSL12 ATCYP20-2 AT5G13140 CRN IQD11 EMB3136 ABAR ATPDAT SIG4 CCS52B ATCHS AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 EMB3137 AT5G14410 AT5G14460 AT5G14500 ATDEF2 AT5G14700 BETA AO AT5G14910 AT5G14970 AT5G15070 GASA4 AtENODL17 GAUT14 BCCP2 LNG1 AT5G15910 AT5G15950 AtNIK1 AT5G16240 VAT1 BCCP ATF2 LRR1 AtMYB43 DHAR3 EMB2247 molecular function has not been defined, was shown involved in oxidative stress tolerance. UGT78D2 ENH1 PSY AtUGP2 MEX1 AT5G17670 ATCIMS ATSRA1 AT5G18600 PCB2 BAM9 NSH3 ADG2 AT5G19290 AT5G19760 AT5G19940 AtHBP5 ATMGD2 ATCPN21 AT5G21100 AT5G21105 ATCKX5 ATHMA8 AT5G22340 IMS3 CaS HCF136 AT5G23480 AT5G23820 TUB8 SLAH3 ATSIG5 SQE5 AT5G24155 ATSS1 PGL5 CRY3 CYP71B12 AT5G25590 AtYUC6 BGLU37 AtTGG1 AT5G26330 PYR6 AT5G27560 ATCYSD2 DES1 AT5G28500 GME ARRPS1 AT5G34930 AT5G35170 CAC2 ATGSL1 AHK2 AT5G35970 atylmg3 AT5G36160 ATPRFB AT5G36230 CAT3 AT5G37010 ARLA1A RBCS3B RBCS2B RBCS1B AT5G38520 CRR7 UDG4 AHP3 DEG8 RS5 AT5G40500 DRB5 ATUBC8 AT5G41760 FTSH5 AOS ATIPK1 AT5G43150 TZP NDH18 KCS20 ARD4 AT5G44020 ABCI21 ATGLK2 TUB4 AT5G44390 AT5G44520 AT5G45280 AT5G45670 ATFKBP13 CHL AtNUDT11 AT5G45950 APE2 KAS1 AT5G46420 AT5G46580 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. LIL3:2 AT5G47190 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. FPS1 GAUT4 FRA1 AMK2 ATRBOHD AT5G48220 AACT2 ADG1 HINT3 AT5G48590 ATCAP-C KAT5 HCT OVA2 DDM2 ATMYB111 ACLB-2 ATGH9A1 ATPPOX AT5G50000 AT5G50100 OLD5 AT5G50370 AT5G51110 AT5G51140 ATTPPA LPA2 At-NEET ATPGMP CRR1 CYP96A4 B2 AT5G52780 AT5G52960 AT5G52970 FTSH11 AT5G53340 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 AT5G53750 TAT7 ATOMT1 PTAC15 CcdA AHL RPL24 THI1 VTC5 AT5G55220 ATMAP65-1 AtIAMT1 GDPDL4 ATKCO1 AT5G56040 ATPEX5 GATA21 NAP1;3 LUT2 PSD2 AHA3 BIO1 CER3 ADCL APO2 NPL1 NdhN AT5G58330 AT5G58390 AT5G58520 AT5G58540 EOL2 FOLK ATPLC5 DDB2 AtcPT4 ATUXS3 LecRK-I.9 ATPDX2 CLB4 ATMYB34 COB PNM1 PDCB1 AtMYB28 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AtTudor2 ARF1-BP AT5G62210 ATGT18 AT5G62350 AHA11 DXR AT5G62930 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. ATFLS2 AT5G63700 SHA1 ALX8 PSAN DCT ATGCH JK218 CESA6 ASN2 AT5G65220 BAM1 AT5G65840 STR16 ATLFNR1 AT5G66470 AT5G66530 MSP-1 sks17 ABA1 ICU2 EPS1 AT5G67200 IRX15-L ATEB1C PSBA ATPA ATPF ATPH ATPI PSBD PSBC RPS14 NDHJ PSBG NDHC ATPE ATPB RBCL ACCD PETA PSBF PSBE PETG PSAJ PSBB PETB PETD NDHB.1 NDHF NDHD NDHE NDHG NDHI NDHA NDHH NDHB.2 NAD9 ATP6 NAD5 COX3
GO:0044699 single-organism process	BP	4.312e-155	LHY AT1G01080 PDH-E1 KCS1 AtFKGP PYL9 ATFRO2 ATGPAT4 PIP1;3 AT1G01630 ATKEA1 GAE2 AT1G02110 AT1G02150 CER1 ATTOC33 AtSAM1 ATCSLD5 AtLEA3 LPA1 AT1G03020 AtD27 NET1D PSAD-2 FZL AtBE2 2A6 AT1G03440 POR ATHM1 AT1G04040 ABCC5 ATXIB KCS2 IAA3 AXR3 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT1G04420 AT1G04430 LIP2 AT1G04680 TOR2 ATGTF2H2 AT1G05070 AT1G05150 AT1G05170 emb2394 ATGLR3.4 LPA19 UGT1 5PTASE13 BT3 ATCTL1 encodes a flavonol-7-O-rhamnosyltransferase involved in the formation of rhamnosylated flavonols BBX24 RHON1 ATGSL07 AT1G06550 HPD encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase OE23 AT1G06690 AT1G06730 AT1G06830 AtSLP1 ATF2KP ATNDI1 AT1G07280 EMB2784 ATPCNA1 AtRLP1 ATRAB-A2B AT1G07440 DVL9 MT1C KCS3 ATMPK13 ATVAM2 AXS2 ADT6 AT1G08280 PSAO FATB ALB-1V ABC1 AVDE1 ATSYP111 ACHT4 AtMYB60 ATCAX11 AT1G09200 AT1G09310 CRB AT1G09440 iPGAM1 AtHIR1 LRR ATBCAT-1 ATGSTU18 ATGSTU17 emb2004 ACLA-1 AT1G10740 AT1G10850 AT1G10900 ATFD1 AT1G11050 SCM AT1G11340 CBRLK1 AT1G11410 ATSS3 CLPP6 ADT1 ATGLX1 AT1G11860 ATSRS Encodes a protein that appears to have 1-amino-cyclopropane-1-carboxylic acid oxidase activity based on mutant analyses. AT1G12080 ELP ATNRT1 ATBETAFRUCT4 AT1G12244 PHR1 ARK3 AT1G12460 AT1G12500 AT1G12570 AT1G12800 AFB3 ICE2 GAPA-2 CYP71B2 ORP1D GATL3 AOC4 Encodes protein phosphatase 2A (PP2A) B'theta subunit. Targeted to peroxisomes. AT1G13650 AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 AT1G14190 AT1G14270 PKS2 SBH2 AT1G14345 AtMYB124 ADL1C RHA2A PSS1 AT1G15140 AT1G15160 AT1G15180 AT1G15410 CYCA2;3 AtAVP1 AT1G15710 CP24 FDM1 AT1G15920 ATCCR1 ATNRAMP6 NDF1 ADAP AT1G16080 CYCB3;1 ATOCT3 CYP79F2 BUS1 ATMST2 ATMYB58 AT1G16680 HCF173 UP6 AtVHP2;2 ACR11 SPS2 AtHBP1 ICR1 AT1G17200 FUG1 GLYR2 ABCG11 AT1G18060 ATMPK8 AT1G18440 AT1G18460 ATSOT17 AT1G18660 NDF6 AGL65 NRT1.9 AT1G19140 LHCA2*1 BES1 KCS4 AT1G19450 AT1G19600 JMT ATCLH1 BEL10 AT1G19710 ARF5 APS2 TUB5 ATLFNR2 ARAC4 ATEXP11 CVP1 DRT112 ASG5 XCP2 AT1G21070 AT1G21350 AT1G21440 AT1G21630 ATNADK2 AT1G21670 AT1G21810 LYM1 ATPIP5K1 AT1G22170 AT1G22430 AT1G22550 AT1G22630 ATRABG3B FB AT1G22850 AT1G23220 AOAT1 AOR UGT74B1 EMB2421 ASB1 CER60 AT1G26190 Cpn60beta4 AT1G26250 AT-EXP10 AT1G27120 ATGSTU13 LCR SPL11 AT1G27480 MAP65-8 ABCB13 LTPG1 ABCB14 AtRLP4 AT1G28390 SRD2 AT1G28600 AT1G28610 AT1G28660 ARAB-1 ATSCAR3 AT1G29660 AT1G29670 AT1G29700 RKF1 AT1G29820 PDH-E1 ARF6 PSAK AAE14 UGT78D1 AT1G30690 AT1G30760 ATPUP4 GlcNAc1pUT1 IMPL1 AK-HSDH PSAF FEI1 ATROPGEF14 AT1G31710 CYP97A3 ACBP AT1G31920 PRK ATNSI AtLrgB AT1G32160 ACT1 AT1G32220 KAN2 PKp3 NRT1.5 AT1G32470 AT1G32780 GBSS1 PRPL11 AT1G33080 AT1G33110 AT-GTL1 AT1G33600 AT1G33700 AT1G33811 OHP2 SAMC2 ATSERK2 EMB3003 EMB2756 AT1G35420 AT1G35560 RPL21C ACC1 AT1G36280 SHM7 ATNR2 SKS6 PMI1 expressed protein localized to the inner membrane of the chloroplast. GAPB AtcFBP ATSDC1 AAP5 CYCA1;1 CP22 SIAR1 ATMCM2 AT1G44920 AtBGAL5 ATTLL1 ABF2 Lhca5 AT1G45688 5PTASE11 AT1G47530 AT1G47670 mtLPD1 AT1G48090 DGAT3 EMB3105 ACD1 RKL1 GATB AtPMEAMT ACT8 AT1G49380 LACS2 AT1G49580 AtCXE5 AT1G49740 TUA2 FTSH1 AT1G50270 ATHX AT1G50450 ATHKL1 AT1G50660 GDC1 AT1G51110 AT1G51200 AT1G51340 Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols. 4CL.1 ATB F-ATMBP AT1G52190 AT1G52220 PSAH-2 ATROPGEF11 ATBG1 TSA1 ATFPG-1 SPA4 FTM6 TCP3 mMDH1 AT1G53290 TTL1 AT1G53380 ATMUM4 ATMPK18 AtFAP3 ATMSRB1 ESP ABCD2 AT1G54500 ACP2 ATATG18H AtTLP18.3 AT1G54790 ANP2 ATLOX1 AT1G55260 ATDEK1 AT1G55360 NDF5 ZKT CPN60B AT1G55550 PSAG AT1G55690 UKL3 ATCSLE1 ATSERAT2;1 AT1G55960 AT1G56050 AT1G56190 AT1G56210 ATDI19 ATNAS4 AT1G56500 SVB AT1G57770 ATATP-PRT1 AT1G58170 AtHEMA1 AAP1 SQE1 RXW8 AT1G59740 ARF1 AT1G60000 DHNS ABC4 ATB2 AtNIK3 ATRECQ4B ATFD2 LHCA3 AT1G61610 AT1G61660 AT1G61740 ATGPT2 APR2 AtPTR6 AT1G62250 ACO2 AT1G62510 FMO KAS AT1G62660 ATSCO1 AT1G62780 NRS/ER AT1G63010 NRPD1 TET10 AT1G63640 AT1G64150 AT1G64370 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. LACS3 AT1G64500 AT1G64510 BDG1 TUA1 NDF2 AMT1;2 RPOD1 CYP89 G-TMT CDI Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication). 4CL3 AT1G65070 AT1G65230 PTAC4 AtRLP10 ATPP2-A5 AT1G65560 ATPAO4 FMO AT1G65870 cICDH GAD2 AT1G66130 TMK1 ATGSR2 AT1G66330 RGL AT1G66430 AT1G66540 DIN9 RBCS1A AT1G67280 ATLOX6 EMB2814 AT1G67700 ATKCR1 PSBY ATFXG1 CSK AT1G67870 AT1G67950 ATHPR1 AT1G68080 AT1G68260 AT1G68400 CER6 PSRP3/1 AT1G68600 AT1G68780 CLE12 PHYLLO BIM2 FLN2 AT1G69420 AGO7 AT-EXP1 AtTCP15 HEMB1 CMT3 NRT1.7 SHW1 SNL4 EMB25 AT1G70200 ATCYCD1;1 AXY4 AT1G70280 PG2 ATBCA4 AT1G70480 AT1G70550 AOAT2 ABCB26 MMZ2 JAZ9 PGM2 CRR23 AT1G70770 MLP43 AT1G70985 FAB1C AT1G71070 AT1G71140 AT1G71480 AT1G71500 AT1G71695 AT1G71710 AtCPB AT1G72130 AT1G72230 AT1G72270 PSY1R AT1G72500 ATGER1 AT1G72810 AT1G72840 EDA17 LPA3 AT1G73110 AT1G73170 ATPIN1 AT1G73600 AT1G73650 AT1G73655 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. ATMPK15 AtEIL3 AT1G73740 BBX16 ENO1 AT1G74070 ATSOT18 ATSOT16 TRM4 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. IQD31 QKY AT1G74730 AT1G74840 NDH-O ALDH10A8 ATKAS2 emb2184 UMAMIT5 AtGH9B7 LQY1 ATCLV1 AtVAB1 ATCDSP32 PETE1 AT1G76110 AT1G76120 AMY2 sks5 CYCB2;4 AT1G76450 AtHMGR1 AT1G76570 AT1G76670 AT1G76740 ACR3 AT1G77090 PIN6 AT1G77310 TAPX LACS9 LAX3 PIP5K2 AT1G78010 AT1G78040 AT1G78060 RAP2.4 ATTPPB AUF1 AT1G78180 ATGSTU23 ATGSTU20 ATGA2OX1 CYP708A3 SPS1 ATSHB ATRHM1 ATTPS1 MSL6 emb1473 ATGGH2 ATLUP1 AT1G78995 PSBR ECT8 AtkdsA1 PGK EMB1047 ATNADP-ME4 SGB1 CS17 AT1G80030 AAA1 NIP6 PDE318 AT1G80850 APG2 AT2G01210 MEE65 RPI2 RGA CRR3 ARR14 AT2G01820 AHK4 ATMAP65-6 PQL3 BRL2 AtPTR4 AtIDD5 STI AT2G02780 ATEXP15 AT2G03390 AT2G03420 AT2G03980 RNE AT2G04280 LACS8 AT2G04700 FLA7 EMB2761 PGR5 AT2G05790 AT2G05920 ENR1 AtOPR3 EXGT-A1 AT2G07170 ABCC13 AT2G07689 AT2G10940 AGT AT2G13440 ABCG5 AtXYP2 AKN1 AGP9 AT2G14910 AT2G15020 LTP AtTic21 ARFB1A AT2G15320 ATHNIR KCS9 MCM4 ADC1 ATGLR2 MCA2 ARAC1 AHK1 SCY1 HY3 AT2G18860 ATHMA4 TET2 AT2G19650 AT2G19780 AT2G19940 ATCLASP PSAE-2 ATXIG ALE2 AAS ATGLK1 ALF1 LIP1 PSB29 LAX2 ATCSP4 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA AT2G21300 BBX18 AtFBA1 AT2G21340 XK-1 AT2G21380 AT2G21385 ATSFH3 AT2G21560 ATRL2 AT2G21830 AT2G21860 AT2G21960 CSI1 PLAT2 AT2G22230 ATIPS2 AAT AT2G22420 AGL22 IAA8 SCPL8 CYP96A1 AT2G23360 AT2G23390 NAPRT2 ATXLG1 ATMES7 ACL ATMES3 YCF37 BLH4 AT2G23950 AT2G24020 AT2G24060 PRPL35 SDR2 AT2G24230 ALDH11A3 AT2G24280 ATRPA2 AFR AT2G24580 ATGPX1 AT2G25270 AT2G25530 emb2410 AT2G25800 AT2G25830 OVA4 PDF1.2b AtGLDP2 AT2G26100 ATHSFA2 CYP711A1 FDH ER AR781 ATDUF3 HO2 KCS11 AT2G26690 AT2G26730 SCAB1 AT2G26800 ABCG32 ATCDPMEK AGO4 AT2G27060 AT2G27130 LHW AT2G27290 AT2G27680 ATNAT12 ADT3 CH-CPN60A AT2G28200 AT2G28320 DRB2 RAP2.7 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 ALB3 ADCS ATEXP6 AT2G29180 ATMTPB1 ATGSTU6 AT103-1A TUB7 PY ANTR1 ATVLN1 AtFAD3 ATZIP6 PBCP EMB3147 ATFC-II KIS AT2G30460 ATC4H CYP71A13 ATCOQ3 FTSH2 ASKdZeta AT2G31040 TCP10 ATERF15 BBX25 ATNTH1 AT2G31670 AT2G31790 ATMYO5 ATGSL03 BAM6 ATGLR3.7 AT2G32640 ATCB5-B ATCOP1 ATXID ATSUVH2 AtCLO3 PRPL28 GALS1 AtCRL2 ATUBC24 EMB3113 AT2G34060 ATRANGAP2 AT2G34460 AT2G34590 ABR ABCC2 AIR9 ATHB-14 ATFAH1 EDA3 EDA18 AT2G34930 AT2G35050 AT2G35260 GDCH AT2G35390 AT2G35410 SKL2 FEI2 ATCSLA07 AT2G35760 SAMTL AT2G35840 AT2G35880 BLH1 NHL12 ATE2FA DOT1 AT2G36145 AT2G36200 AT2G36350 DML1 AT2G36570 GAMMA-TIP MAT3 ABCB1 AT2G36950 ATSIG6 ATPAL1 PIP2;2 PIP2;3 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 ABCG33 UMAMIT12 AT2G37540 AGD7 AS1 ATEXP3 AT2G37660 AKR4C10 LCD1 AT2G37900 CAC3 AtAUX1 PSRP4 PDX1L4 ATPDX1.1 PYL4 ATSCAR2 cdf3 ATLTP1 RDO2 GAUT7 ATMVD1 MAP65-5 ATPT2 PIP2;6 NATA1 ATMTP11 PnsL1 ATEXP4 RCA CYT1 ATPROT1 ATISA1 AT2G40400 HEME2 ATKT2 ETG1 AT2G40760 CYP98A3 AT2G41050 AT2G41060 SSL2 ARR8 NTRC EMB2654 ATVLN2 AT2G41820 AGK1 AT2G41890 AT2G42130 AtSPL9 AT2G42220 ATBZIP34 AT2G42490 ATPPC2 AT2G42690 ATMPK20 ATPAO2 AT2G43030 ATLEUD1 AT2G43240 BIO2 Encodes a defensin-like (DEFL) family protein. AT2G43560 FAB2 ACS1 5PTase12 ATHOL1 MTHFR2 AT2G44300 BGLU26 CHL-CPN10 AT2G44870 AT2G44920 AT2G44970 AT2G45180 AFO encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis AT2G45340 BEN1 AGP8 CYP76C1 ATPEX16 PLIM2a AT2G45850 AT2G45870 ATHH2 CYP86A8 AT2G45990 KPHMT1 AtSLD2 SPA1 AtGH3.11 ATCNGC12 CYP78A6 AT2G46690 ROPGAP3 PSAP PIL1 SPL1 AtBOR1 AtGolS1 CER8 CAO ATNDT1 AT2G47500 PHR2 AT2G47780 AT2G47880 CRR6 DEG2 AT2G48020 RPH1 AT3G01060 AtCGS1 AtSS2 PnsL3 ATHB-1 ATCYP38 ATBCA1 ATPPT2 AT3G01810 AK3 ATKT4 ATRGP1 AT3G02250 GAUT9 ATCOL2 RAD23-3 MEE31 ATF1 AT3G02750 AT3G02820 ATGSTF11 AtUGP1 NPC3 PDE326 AT3G03770 ATMS2 APK3 emb2458 SDG31 EMB3119 PDE181 ATCYSD1 AT3G05165 AT3G05180 AT3G05220 ATN AtRLP31 AT3G05470 RALFL22 Encodes a defensin-like (DEFL) family protein. AIF1 ATSK12 AT3G05990 AT3G06035 AT3G06130 EMB3004 GATA15 AT3G06750 AT3G06980 AT3G07270 AT3G07310 ATCSLC06 AT3G07540 AT3G07890 SCPL27 AT3G08030 AT3G08600 AT3G08640 AT3G08680 LHCB4.2 AT3G09050 OPS ATHY2 PTAC13 AT3G09440 ATPAH1 AT3G09580 CRM3 AT3G09730 ADK1 PIP5K9 OMR1 AT3G10060 ATPAP16 ATDFC AtLCY GYRB1 PAL4 AT3G10350 AHB2 ABCI6 AT3G10720 LSF2 ATWI-12 AtFAD7 AT3G11210 AT3G11490 AT3G11560 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 ATHST emb2738 ACT11 FAD2 FLOR1 AT3G12210 ATTBP2 DRT100 AGC1.5 AtZIP1 PGK1 BRG3 AT3G12930 AT3G13040 ATSERAT2;2 AT3G13120 AT3G13180 AT3G13226 Cpn60beta2 ATKRS-2 AT3G13510 PUT4 CYP90D1 BGAL1 AT3G14067 FLU AT3G14205 ESM1 AT3G14220 ATPME3 SRF7 ATGSL04 CYP72A11 CYP72A15 ATMPK19 ATRHM3 MSL5 HEME1 IDM1 MEE35 AT3G15090 PRPS20 SPL5 ATMT3 ATHM4 AT3G15470 AT3G15520 AT3G15550 AT3G15570 AT3G15690 ADS3 TPR4 SULTR3;4 MFP1 AT3G16060 AQP1 NDF4 AT3G16270 EMB2083 ABCG29 AHP4 AT3G16370 JAL35 ATRALF23 ATKINESIN-13A ATEBP AT3G16850 AAE7 LPD1 HCF107 ECT6 AT3G17340 POK1 MAT4 ATCRSH CIPK1 HYH AT3G17640 PDE321 ATACP5 RLK902 NMT1 WOX1 AT3G18050 EMB1270 AT3G18210 BTS EMB1865 AT3G18500 ACT2 ATPLT5 AtTic62 AT3G19000 POK2 ATPREP1 AT3G19370 ATCAD4 AT3G19480 IKU2 BCAT4 CBB1 AT3G19850 CYP705A21 AT3G20390 POLGAMMA1 AT3G20680 AT3G20790 AT3G20820 AtBBX32 GluTRBP 4CL5 4CL2 GLTP3 ADOF2 AT3G21390 UGT84A2 AT3G21670 AT3G21690 ATSGP2 CYCP2;1 CWLP Encodes a Protease inhibitor/seed storage/LTP family protein ATWNK2 AT3G22520 SOL1 ATTSO1 NET1A AT3G22810 ELIP APS1 PKP-ALPHA ATSR2 ATCFM3A AT3G23090 bHLH34 ATFAO3 ATPHO1 AT3G23510 AT3G23530 AT3G23660 KINESIN-12B AT3G23700 RALFL24 ATSAHH2 GAE6 ATTOPII HCF101 ALDH1A AT-HSFC1 PLSP1 ICK3 GAUT8 ATFKBP62 AT3G25410 AFH1 ATGHBDH AAPT2 AT3G25660 AtCHUP1 AOC1 AOC2 AT3G25805 LTA2 ATPRX CYP71B22 CYP71B34 CYP71B35 CYP71B36 AT3G26450 GAMMA-TIP2 ORF02 GAPA ATSNM1 CCB1 ATICE1 ATSKL1 DRB3 YSL6 ATTSO2 ATCLC-B LHCB2 ATMDAR4 AT3G28040 UMAMIT47 AT3G28200 AT3G28220 ABCB15 AT3G28460 ABCB19 ATEXP5 AT3G29185 ATCM1 DAYSLEEPER AT3G42660 CHR38 AAO2 AT3G43610 LTPG2 ATGSTU27 ATJ ATNIT1 AtKIN14h ATPSK3 RPL9 AT3G44970 AT3G45160 TET3 JK224 AT3G45850 AT3G45900 AT3G46370 FLA4 AT3G46630 PTAC16 DUT1 AT3G47070 ATPLC8 PEX11B ATSMC2 CAB4 AT3G47580 PYE AT3G47650 AT3G47830 GTR1 ALDH2 ATATM AT3G48200 CYP71A25 AT3G48420 AT3G48460 AHAS DCF GSA2 AT3G49220 iqd21 DIN11 BAM2 ATBCAT-3 AtRLP44 ARLA1C KICP-02 OBP1 CRK ICK2 AT3G50685 AT3G50790 OEC33 SRS1 AT3G51090 AT3G51140 AT3G51150 GMD2 F3'H AT3G51280 ATSSL4 ATGLR3.6 AT3G51510 LTP5 ATWNK5 AT3G51720 IMK2 ATG4 AST12 AT3G52110 PSRP2 CP33 AT3G52500 ACA1 FTSZ2-2 BGAL2 KIPK ELL1 AT3G53100 CYP97C1 AtRLP45 ATPAL2 CYP71B5 AtPIP2;1 ATCHX20 PYRR AT3G53960 HCEF1 ATPTR1 AT3G54210 SCR AT3G54290 AT3G54400 ATGR2 SETH3 PIP2;5 AT3G54830 LHCA1 ATGRXCP PMR6 AT3G54930 PLA PGPS2 GSTL2 ABCG18 A11 PDE329 PPL1 ATTSC13 OVA1 AT3G55420 P5CS2 ATDFD SBPASE AT3G56010 UGP3 AT3G56060 IMK3 AT3G56160 Encodes a putative amino acid transporter. AT3G56290 AT3G56370 CYP94D2 PPD6 AT3G56680 AT3G56870 PSRP5 ACSF AT3G57060 AT3G57070 BPG2 PrfB3 AT3G57220 AGL16 ATVLN3 AT3G57830 SPL15 GIS ATMYOS3 ATWRKY69 GAUT15 IPMI1 AT3G59040 PIF5 GUN4 ACR4 AT3G59780 AT3G59940 MTHFR1 AT3G60290 AT3G60320 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. CDS5 AT3G60750 MAP65-4 AT3G61080 GAUT1 HD-GL2-1 SDR1 ATPIP1 ARATH;BSAS3;1 AtSLD1 HS AT3G61870 CYP20-3 ABCB21 CP12 ATMYB11 ABCC14 APG3 ATIPT3 CYCP1;1 CSP41A OEP6 AtFAP1 AtcpRRF PLA APG1 EMB3126 AT3G63510 ATCCD1 BB BRCA2(IV) UNE10 AT4G00165 YAB3 EDA8 RLK4 ATT1 ANTR2 FDM2 AtGPAT8 PIP1;4 ATMYC1 AT4G00560 NAD-ME2 AHDP AT4G00895 MEE47 TROL GT72B1 MGP4 AT4G01310 ABC1 HEMG1 AT4G01790 AGY1 AtSAM2 ATGPAT3 MCM7 AT-RSH1 AT4G02410 ATXT2 ATTOC159 AT4G02530 EOL1 PSAD-1 EMB3129 AT4G02940 AT4G03010 AtRBP-DR1 AFB1 XTH9 PETC ATHM2 AT4G04340 EMB2369 APR ATPC1 CPK27 AT4G04750 ATMSRB6 ATKEA3 PDF2 AT4G05090 AtMYB74 ATENT6 PSBQ ATK5 Encodes a putative glycosyl hydrolase family 10 protein (xylanase). ARGAH2 APX4 A/N-InvI AT4G09630 ATPD AT4G10060 ATSPS4F ATDET1 AT4G10300 LHCB5 AT4G10390 ATOPT7 AT4G11100 SPA2 AT4G11175 ATMPK5 AT4G11570 BASS5 CYP706A5 CYP706A6 PME1 SKU5 FLA2 PSAL AtENODL19 EPFL9 AT4G12980 AT4G13050 MEE55 SDG22 AT4G13550 CYP83A1 AT4G13840 SHM4 ATSAHH1 EDA38 The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. KINESIN-12A PDE226 AT4G14330 AT4G14360 ATECI3 ATCFM3B CIPK4 APS3 ELIP2 AT4G14740 ATTCX2 TUA6 CYP97B3 ATCCT2 ATXR3 AFH3 AT4G15430 AT4G15545 IAGLU AtCLA1 ATVAMP724 AT4G15810 AT4G15830 AtSWEET17 AT4G16155 PHYD SPK1 ATOPT3 AT4G16380 AT4G16490 AT4G16980 AT-EXPR CLPR4 AtBAM3 ATG2484-1 DELTA-TIP2 AT4G17350 ATRAB1C AtG3Pp4 AT4G17560 LIL3:1 AT4G17650 AT4G17740 ATTPS5 AT4G17810 MYC4 ALMT12 APRR2 AT4G18030 PHYE ATSS4 KAT2 TCP2 CH-42 ATWL4 AtRLP51 AT4G18810 AT4G18820 ATNLM2 AT4G18970 CCD4 AT4G19460 Encodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death. AK-HSDH ATPP2-A1 AAH PTAC14 BAM3 ATRAB8D AT4G20760 AT4G20820 AT4G20840 ATFAH2 GHR1 PyrD AT4G21060 emb1417 ATRP1 PSBQ B120 ATM4 ATML1 MSRB2 AT4G21910 PRXR1 APR3 sks4 AKT2 AT4G22490 CYP706A1 CYP706A2 AT4G22730 ATSMO1-2 PGR5-LIKE AT4G22990 PIP1;5 AT4G23670 AT4G23740 CRF2 CRR31 ARC1 ATCSLG3 ATCSLG1 ATYSL1 cpHsc70-1 AT4G24350 CER2 AGL24 PGI ATHB22 TAR2 AT4G24750 ATRBP31 AT4G24780 AT4G24930 ATHVA22D TPD1 AT4G25030 ACP4 CHLM MSRA4 AT4G25280 AT4G25290 ABCB28 AT4G25600 ATDTX35 B1 AT4G25830 ABCB2 AT4G26130 CGA1 AtFBA7 AtFBA5 AT4G26540 AT4G26555 AtWRKY20 AT4G26650 GDPDL3 ATFIM1 AT4G26710 MAP65-2 AT4G26790 VTC2 AT4G26860 AT4G26940 FAD4 AT4G27130 ATK2 AT4G27300 AT4G27360 CIP7 AT4G27435 AtENODL2 NARA5 ATMTM1 AT4G28080 ATEXPB3 AtMAN5 PSB28 AMT1;4 AT4G28706 AT4G28740 PSAE-1 AT4G28780 emb2726 IAA27 AT4G29120 ATHXK1 ADS1 PFK1 ACHT2 ATPAO5 AT4G30020 AT4G30060 ATVLN4 AHA2 VEL1 AR2 GAE1 AT4G30470 SARK GGP1 BRS1 PDE327 scpl29 ASHR3 AtLAP2 FAD6 ATCIPK6 AT4G31280 AT4G31310 AT4G31360 ACDO1 AT4G31530 HCF153 EMB2797 ENP PGR3 ATGPX7 PDE334 APX6 AT4G32330 AtCESA1 LUG AT4G32590 ATSDX1 ATHB-8 ATH1 AtGLDP1 AT4G33110 FAB1A ATHDA14 AT4G33500 AtHMAC6 KUP5 AT4G33560 ATBCA5 AT4G33740 AT4G33760 CER4 ATOST1 CCoAOMT1 AT4G34090 SEP1 AT4G34220 ALDH3 CLB6 ATCAP1 AT4G34600 BLH6 SSR16 ERG9 SQS2 ATVHA-C1 AT4G34730 ASE2 MRL1 AT4G34920 SLP2 AtMYB32 APX3 CAT2 PIP2;7 HCF244 ATGLR3.2 TMT2 AT4G35335 XCP1 AFT DAW1 MCA1 ARAC6 AT4G36180 CYP84A1 ALDH3F1 BGAL3 AT4G36390 AT4G36530 BEE2 AtPLT6 AtGGPPS11 BLH2 ACD2 MEE59 CYP81H1 CYP81D5 CYP81D4 CYP81F3 MEL1 ANT SQE3 XTH7 NDH-M SHM1 ATCAD6 ATCAD7 pde191 AQI ATROPGEF1 AtVAB2 ATMYB4 AT4G38660 AT4G38690 ROC1 ATPRP4 ATVHA-C3 AT4G38950 AtFBA2 AT4G39040 AT4G39050 VHA-A3 SHL1 ATSEC14 APL3 ATCAD9 ATCESA2 SAMC1 CYP96A12 ATSK2 AT4G39630 ATIPS1 AKN2 CYP79B2 AT4G39970 DHS1 ATGB3 AT5G01020 LAC8 AT5G01090 SQD2 LAX1 AT5G01260 ACI1 ATPDX1 AIRP2 LHCB4.1 AT5G01590 ATRAPTOR1A AT5G01890 OHP AT5G02160 Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ATMTRNASEII ABCI20 AT5G02370 MT2B AT-HSC70-1 AT5G02710 AT5G02940 iqd2 ATRAB AtNCS1 SBE2.2 TRM28 ATCSLA09 AT5G03870 AT5G03880 54CP GYRB2 FD-GOGAT ATPAL3 ATLDA KCS19 SIR ACR12 NOL ATNAS1 AT5G04980 RUL1 ATCESA3 AT5G05180 AtCHIL AtFAD8 ATEGY2 AT5G05820 UGT76C2 AT5G05960 NEDD1 2-Cys ATNUDX27 AT5G06670 TBR FTIP1 AT5G06970 AT5G07020 ERL2 ATMSRA2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ATMYB29 AT5G07800 CYP75B1 AT5G08050 TCP17 BIM1 ATAIH AT5G08390 FTRA2 AT5G08415 AT5G08430 PDE340 ATFLS1 AT5G08650 NDC1 AAP2 AtSRT2 PI-4KBETA2 AtPPa6 PMDH2 ATBX3 AT5G09760 CESA5 PROPEP5 AT5G10020 ATMIPS3 AST68 ASN3 AtRABH1e KAC1 PAS2 AIL6 CYP81K2 AT5G10690 CIPK5 AT5G10960 ATSPS2F HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 ATNADP-ME2 NDL2 AT5G12010 ATMSL10 AT5G12110 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 DiT1 AT5G12970 ATGSL12 ATCYP20-2 AT5G13140 AtSWEET15 CRN AT5G13400 IQD11 EMB3136 SULTR4;1 ABAR ATPDAT CYL1 SIG4 ZIF1 ZIFL1 CCS52B ATCHS AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 AT5G14210 EMB3137 AT5G14410 AT5G14460 AT5G14500 ATDEF2 AT5G14700 BETA AO AT5G14880 AT5G14910 AT5G14940 AT5G14970 AT5G15070 GASA4 AtENODL17 ATCNGC2 GAUT14 BCCP2 LNG1 AtbZIP3 AT5G15910 AT5G15950 AtNIK1 AT5G16240 VAT1 BCCP ATF2 PIN5 LRR1 AtMYB43 DHAR3 EMB2247 molecular function has not been defined, was shown involved in oxidative stress tolerance. AT5G17010 UGT78D2 ENH1 PSY AtUGP2 ER-ANT1 MEX1 AT5G17630 AT5G17670 EMB1241 ATCIMS AT5G17980 APY2 anac088 ATSRA1 AT5G18500 ATOBGC EMB40 AT5G18590 AT5G18600 PCB2 BAM9 EMB3013 NSH3 AT5G19090 ADG2 AT5G19290 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. ATOEP80 AT5G19760 TUA3 TUA5 AT5G19940 AT5G19970 AT5G20050 AtHBP5 PHT4;5 ATMGD2 ATXIK AT5G20700 ATCPN21 AT5G20885 AT5G21100 AT5G21105 CIPK26 ATCKX5 ATHMA8 anac089 AT5G22340 emb1211 ATMGT10 H2B IMS3 CaS HCF136 AT5G23480 AT5G23820 TUB8 AT5G23910 AT5G24010 SLAH3 ATSIG5 SQE5 AT5G24155 ATSS1 AT5G24320 ATYSL2 PGL5 AT5G24580 CRY3 CYP71B12 DGR2 AT5G25590 AtYUC6 BGLU37 AtTGG1 AT5G26330 PYR6 AtRH3 ATIREG3 AT5G27290 SFP1 SFP2 AT5G27550 AT5G27560 ATCYSD2 DES1 AT5G28500 AT5G28750 GME ARRPS1 AT5G34930 AT5G35170 AMOS1 CAC2 ATGSL1 AHK2 AT5G35970 atylmg3 AT5G36160 ATPRFB AT5G36230 CAT3 AT5G37010 ARF8 WSD1 ARLA1A RBCS3B RBCS2B RBCS1B AT5G38520 CRR7 UDG4 AHP3 ORTH1 DEG8 RS5 AT5G40450 AT5G40500 AT5G41060 DRB5 GL3 ATUBC8 AT5G41760 CIP1 AT5G42070 ATBG_PPAP AtMfl1 FTSH5 AOS ATIPK1 AT5G43150 SPL2 TZP NDH18 KCS20 ARD4 AT5G43870 AT5G44020 AT5G44050 ABCI21 ATGLK2 TUB4 AT5G44390 AT5G44520 MCM6 AtPP2-A6 AT5G45280 BAM8 AT5G45670 ATFKBP13 AT5G45700 AtRLP55 CIPK20 CHL AtNUDT11 AT5G45950 APE2 AtLARP6a KAS1 AT5G46390 AT5G46420 BSK2 AT5G46580 TET1 PYL1 BOU Encodes the mitochondrial ATP synthase subunit delta. LON2 LIL3:2 AT5G47190 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. FPS1 GAUT4 FRA1 AMK2 ATRBOHD PAT1 AT5G48220 AACT2 ADG1 AT5G48360 AT5G48460 HINT3 AT5G48590 ATCAP-C ATSDI1 KAT5 AT5G48900 LPA66 HCT OVA2 DDM2 HRB1 ATMYB111 ACLB-2 AAP6 XIP1 ATGH9A1 RUS6 cpHsc70-2 ATPPOX AT5G50000 AT5G50100 AT5G50180 OLD5 EMB1006 AT5G50370 AT5G50420 AT5G50740 AtSWEET13 CAA33 AT5G51110 AT5G51140 ATTPPA LPA2 EXL3 AT5G51560 At-NEET ATPGMP ATBAG1 CRR1 CYP96A4 HCF106 B2 AT5G52780 ATWRKY27 AT5G52960 AT5G52970 AT5G53140 FTSH11 AT5G53340 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G53500 AtPLR1 AT5G53750 ATMLO11 emb2737 AtPSKR2 AT5G53900 TAT7 ATOMT1 PTAC15 ATM2 CcdA AT5G54300 AHL RPL24 THI1 VTC5 AT5G55220 ATMAP65-1 AtIAMT1 AT5G55400 GDPDL4 LOP1 AT5G55580 ATKCO1 FLA1 CRR21 ATOPT1 AT5G55950 AtHsp90.2 AT5G56040 ATPEX5 ATET2 GATA21 NAP1;3 LUT2 CIA2 PSD2 AT5G57345 AHA3 ATVDAC4 BIO1 AT5G57710 CER3 ADCL APO2 ATCNGC5 NPL1 AT5G58150 AT5G58160 NdhN AT5G58330 AT5G58390 AT5G58520 AT5G58540 EOL2 FOLK ATPLC5 DDB2 AtcPT4 AT5G58930 GIL1 AT5G59250 ATUXS3 AT5G59480 AtVIP2 ATEXO70H7 HTA6 LecRK-I.9 ARF4 ATPDX2 CLB4 ATMYB34 COB AT5G60930 PNM1 PDCB1 VIP4 AT5G61240 PIF7 EMB2728 AtMYB28 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AtTudor2 APC1 AML1 ARF1-BP AT5G62210 ATGT18 AT5G62350 CDF1 AHA11 TUB3 AT5G62710 AT5G62730 DXR ATPEX14 AT5G62840 AT5G62890 AT5G62930 BT1 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AT5G63410 ATFP3 ATFLS2 AT5G63700 AT5G63710 SHA1 AAP4 ALX8 PSAN DiT2.2 DCT ATGCH JK218 AT5G64460 EMB3144 CESA6 CLEL ASN2 AT5G65220 ATHB-5 KAC2 BAM1 ATRLP57 AT5G65840 AT5G65990 STR16 ATLFNR1 AT5G66230 AT5G66310 AtMAN7 AT5G66470 AT5G66530 MSP-1 ENY AT5G66740 sks17 ABA1 RALFL34 ICU2 EPS1 TOE3 AT5G67200 IRX15-L CYCD3;2 ATEB1C RLK ARA12 PSBA ATPA ATPF ATPH ATPI PSBD PSBC RPS14 NDHJ PSBG NDHC ATPE ATPB RBCL ACCD PETA PSBF PSBE PETG PSAJ PSBB PETB PETD NDHB.1 NDHF YCF5 NDHD NDHE NDHG NDHI NDHA NDHH NDHB.2 NAD9 ATP6 NAD5 COX3
GO:0008152 metabolic process	BP	4.069e-154	LHY AT1G01080 PDH-E1 KCS1 AtFKGP encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT1G01300 AT1G01320 AT1G01390 UGT72B3 ASG4 AT1G01540 ATFRO2 ATGPAT4 PIP1;3 AT1G01630 GAE2 AT1G02110 AT1G02150 CER1 AtSAM1 ATCSLD5 LPA1 AtD27 NET1D PSAD-2 FZL AtBE2 2A6 AT1G03590 PSB27 POR ATHM1 AT1G03730 AT1G04040 KCS2 IAA3 AXR3 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT1G04420 AT1G04430 PDLP2 LIP2 AT1G04680 AT1G04800 TOR2 ATGTF2H2 AT1G05140 AT1G05150 AT1G05170 emb2394 LPA19 UGT1 5PTASE13 BT3 ATCTL1 AT1G05870 encodes a flavonol-7-O-rhamnosyltransferase involved in the formation of rhamnosylated flavonols BBX24 ATMYB13 RHON1 FTSH8 ATGSL07 AT1G06550 HPD encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase OE23 AT1G06690 AT1G06730 AtSLP1 ATF2KP ATNDI1 UGT71C5 UGT71C4 AT1G07280 EMB2784 SR45a ATPCNA1 AtRLP1 ATRAB-A2B AT1G07440 ftsh10 KCS3 ATMPK13 GATA11 AXS2 ADT6 AT1G08280 PSAO FATB ALB-1V ABC1 AVDE1 ATSYP111 ACHT4 AT1G08800 AtMYB60 AT1G09310 CRB AT1G09440 AT1G09750 iPGAM1 AtHIR1 LRR ATBCAT-1 AT1G10120 ATGSTU18 ATGSTU17 ACLA-1 AT1G10740 AT1G10850 AT1G10900 EMB3103 ATFD1 AT1G11050 SCM AT1G11340 CBRLK1 AT1G11410 ATPMEPCRA ATSS3 CLPP6 ADT1 AT1G11820 ATGLX1 AT1G11860 ATSRS Encodes a protein that appears to have 1-amino-cyclopropane-1-carboxylic acid oxidase activity based on mutant analyses. AT1G12080 ELP ATNRT1 ATBETAFRUCT4 AT1G12244 PHR1 AT1G12460 AT1G12500 AT1G12570 ATRBL6 AT1G12800 AFB3 ICE2 GAPA-2 CYP71B2 ORP1D GATL3 AOC4 AT1G13650 AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 AT1G14190 AT1G14200 AT1G14270 PKS2 SBH2 AT1G14345 AtMYB124 AT1G14460 AT1G14600 ADL1C scpl50 RHA2A PSS1 AT1G15140 AT1G15165 AT1G15410 AT1G15530 CYCA2;3 AT1G15710 CP24 FDM1 AT1G15920 ATCCR1 NDF1 ADAP AT1G16080 CYP79F2 BUS1 ATMYB58 AT1G16680 HCF173 UP6 ACR11 SPS2 AtHBP1 FUG1 GLYR2 ATEGY3 AT1G18060 ATMPK8 AT1G18170 BEE1 AT1G18440 AT1G18460 AT1G18485 ATSOT17 AT1G18660 AtMYB47 NDF6 AT1G19140 LHCA2*1 BES1 KCS4 AT1G19490 ATDHAR1 AT1G19600 JMT ATCLH1 AT1G19690 BEL10 AT1G19710 ARF5 APS2 TUB5 ATLFNR2 ARAC4 CVP1 DRT112 ASG5 AT1G20810 XCP2 AT1G21060 AT1G21350 AT1G21440 AT1G21590 ATNADK2 AT1G21670 LYM1 ATPIP5K1 AT1G22170 AtUGT85A5 AT1G22430 AGL87 AT1G22630 ATRABG3B FB AT1G22850 AT1G22910 AT1G23030 AOAT1 ATCAF2 AOR MLP423 UGT74B1 ARL1 AT1G24330 EMB2421 ASB1 BBX15 CER60 AtPERK10 AT1G26190 ATSOFL1 AT1G26220 Cpn60beta4 BGLU40 AT1G26790 AtHB23 AT1G27120 ATGSTU13 SPL11 AT1G27480 ATPUB45 AT1G28390 SRD2 AT1G28600 AT1G28610 AT1G28660 ARAB-1 AT1G29070 AT1G29660 AT1G29670 AT1G29700 AT1G29720 RKF1 AB180 AB165 AB140 AT1G29950 PDH-E1 ARF6 PSAK AAE14 UGT78D1 AT1G30600 AT1G30690 AT1G30760 GlcNAc1pUT1 IMPL1 AK-HSDH PSAF FEI1 ATROPGEF14 AT1G31710 CYP97A3 ACBP AT1G31920 PRK ATNSI AT1G32160 ACT1 AT1G32220 KAN2 PKp3 NRT1.5 AT1G32470 AT1G32780 GBSS1 PRPL11 AT1G33110 AT-GTL1 AT1G33470 AT1G33600 AT1G33700 AT1G33811 ATSERK2 EMB3003 EMB2756 AT1G35340 AT1G35420 AT1G35560 RPL21C ACC1 AT1G36280 SHM7 ATNR2 SKS6 PMI1 expressed protein localized to the inner membrane of the chloroplast. GAPB AtcFBP ATSDC1 CYCA1;1 CP22 ATMCM2 AT1G44920 AtBGAL5 BGLU1 ATTLL1 ABF2 Lhca5 5PTASE11 DYW1 mtLPD1 AT1G48100 DGAT3 EMB3105 ACD1 RKL1 GATB AtPMEAMT AT1G49010 ACT8 AT1G49380 LACS2 AT1G49580 ATPREP2 AT1G49650 AtCXE5 AT1G49740 PUB26 AT1G49975 AT1G50120 FTSH1 AT1G50270 ATHX AT1G50380 SCL-3 AT1G50450 POLGAMMA2 GDC1 AT1G51080 AT1G51110 AT1G51340 Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols. ABCG12 4CL.1 ADOF1 AT1G51805 AT1G52220 PSAH-2 ATBG1 ATFPG-1 AT1G52510 AT1G52540 SPA4 FTM6 TCP3 mMDH1 AT1G53290 AT1G53430 ATMUM4 ATMPK18 AtFAP3 ATMSRB1 AT1G53900 ESP AT1G54050 AT1G54290 ABCD2 AT1G54410 AT1G54500 ACP2 ATATG18H AtTLP18.3 AT1G54790 AT1G54820 ANP2 ATLOX1 AtIDD7 AT1G55260 AT1G55360 NDF5 ZKT CPN60B PSAG AT1G55690 UKL3 ATCSLE1 ATSERAT2;1 AT1G55960 HAC04 AT1G56050 AT1G56190 AT1G56210 ATDI19 ATNAS4 AT1G56500 AT1G57770 ATATP-PRT1 AT1G58170 AtHEMA1 SQE1 RXW8 CRR28 ARF1 CCB4 AT1G59860 AT1G59970 AT1G60000 BGLU5 BGLU6 DHNS AT1G60590 ABC4 ATB2 AtNIK3 ACLA-2 ATRECQ4B ATFD2 AT1G60990 AT1G61190 AT1G61300 LHCA3 AT1G61610 AT1G61660 AT1G61740 ATGPT2 AT1G62170 APR2 AT1G62250 ACO2 FMO KAS AT1G62660 ATSCO1 AT1G62780 NRS/ER NRPD1 AT1G63640 AT1G64355 AT1G64370 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AtGH9C2 LACS3 AT1G64500 AT1G64510 BDG1 AT1G64680 TUA1 NDF2 AMT1;2 RPOD1 CYP89 G-TMT 4CL3 AT1G65070 AT1G65190 AT1G65220 AT1G65230 AtRLP10 AT1G65560 ATHEX1 ATPAO4 FMO AT1G65870 cICDH GAD2 AT1G66080 AT1G66130 ZFP4 TMK1 ATGSR2 AtMYB20 AT1G66330 RGL AT1G66430 AT1G66540 DIN9 RBCS1A AT1G67280 ATLOX6 EMB2814 AT1G67700 ATKCR1 PSBY ATFXG1 CSK AT1G67870 AT1G67950 ATHPR1 AT1G68080 AtIDD14 AT1G68260 AT1G68400 CER6 PSRP3/1 AT1G68600 AT1G68660 AT1G68810 ATSOFL2 PHYLLO AT1G68940 BIM2 FLN2 AGO7 AT1G69523 AT1G69526 AtTCP15 HEMB1 CMT3 NRT1.7 AT1G70000 SNL4 EMB25 AT1G70200 ATCYCD1;1 AXY4 AT1G70280 PG2 ATBCA4 AT1G70480 AT1G70550 AOAT2 ABCB26 MMZ2 JAZ9 PGM2 CRR23 AT1G70770 AT1G70985 AT1G71070 AT1G71480 AT1G71500 AT1G71695 AT1G71710 AT1G71810 AT1G72030 AT1G72230 AT1G72270 PSY1R AT1G72500 AT1G72810 EDA17 LPA3 AT1G73110 AT1G73170 AT1G73390 AT1G73450 AT1G73460 ATPIN1 AT1G73600 AT1G73650 AT1G73655 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. ATMPK15 AtEIL3 AT1G73740 BBX16 SPPA ENO1 AT1G74070 ATSOT18 ATSOT16 ATHSP101 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. IQD31 QKY AT1G74840 NDH-O ALDH10A8 ATKAS2 RPS9 emb2184 UMAMIT5 AtGH9B7 LQY1 ATCLV1 AtVAB1 ATCDSP32 PETE1 AT1G76110 AT1G76120 AMY2 sks5 CYCB2;4 AT1G76350 AT1G76450 AtHMGR1 AT1G76570 AT1G76880 ACR3 AT1G77060 AT1G77090 AT1G77310 TAPX LACS9 LAX3 PIP5K2 AT1G78010 AT1G78040 AT1G78060 RAP2.4 ATTPPB AT1G78140 ATGSTU23 ATGSTU20 ATGA2OX1 CYP708A3 SPS1 ATSHB ATRHM1 ATTPS1 emb1473 ATGGH2 ATLUP1 AT1G78995 PSBR ECT8 APL AtkdsA1 PGK EMB1047 AT1G79600 AT1G79630 AT1G79640 RFO1 AT1G79720 ATNADP-ME4 CS17 AT1G80030 encodes a glycerate kinase which catalyzes the last step of photorespiration C2 cycle. AT1G80640 NIP6 AT1G80850 AT1G80870 APG2 AT2G01210 MEE65 RPI2 RGA CRR3 ARR14 AT2G01820 AHK4 PQL3 BRL2 AtIDD5 STI AT2G02780 ATEXP15 AT2G03140 AT2G03390 AT2G03420 AT2G03550 ACR5 AT2G03750 AT2G03980 AT2G04039 RNE LACS8 AT2G04378 AT2G04700 FLA7 EMB2761 LHCB2 LHCB2 PGR5 AT2G05790 AT2G05920 ENR1 AtOPR3 PSBX EXGT-A1 AT2G07170 AT2G07689 AGT AT2G13440 AtXYP2 MCM9 AKN1 AGP9 AT2G14910 AT2G15020 ARFB1A ATHNIR OTP51 KCS9 MCM4 ADC1 AT2G16750 AT2G16890 AT2G17972 ATBZIP2 AtPPa2 AT2G18560 AT2G18570 AT2G18630 SCY1 HY3 ATHMA4 SLP3 AT2G19650 AT2G19940 ATCLASP PSAE-2 ALE2 AAS AT2G20550 ATGLK1 ALF1 AT2G20725 LIP1 AtERF53 PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 XK-1 AT2G21380 AT2G21385 AT2G21560 ATRL2 AT2G21830 AT2G21860 AT2G21960 SEP2 CSI1 PLAT2 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT2G22230 ATIPS2 AAT AT2G22360 AT2G22420 AGL22 IAA8 SCPL11 SCPL8 scpl10 AT2G23070 CYP96A1 DEAR3 AT2G23360 AT2G23390 NAPRT2 ATMES7 ACL ATMES3 YCF37 AT2G23690 BLH4 AT2G23950 AT2G24020 AT2G24060 PRPL35 PDE319 AT2G24170 SDR2 AT2G24230 ALDH11A3 AT2G24280 ATRPA2 AFR AT2G24580 ATGPX1 AT2G25530 AtDBP1 AT2G25800 ESE2 AT2G25830 OVA4 AT2G25870 AtGLDP2 AT2G26100 ATHSFA2 CYP711A1 FDH ER AT2G26500 ATDUF3 HO2 KCS11 AT2G26730 AT2G26800 ATCDPMEK AGO4 AT2G27060 LHW AT2G27290 AT2G27420 ATNLP1 AT2G27680 ADT3 CH-CPN60A ATFUC1 AT2G28200 DRB2 BGAL8 RAP2.7 AT2G28590 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 ALB3 ADCS ATRBL1 AT2G29180 AT2G29290 AT2G29310 AT2G29340 ATGSTU6 AT103-1A TUB7 PY ANTR1 UGT71D1 ATVLN1 AtFAD3 AT2G30150 PBCP EMB3147 AT2G30320 ATFC-II ATC4H PSBW CYP71A13 ATCOQ3 FTSH2 ASKdZeta AT2G31040 TCP10 ATERF15 BBX25 ATNTH1 AT2G31670 UGT74D1 AT2G31790 ATMYO5 ATGSL03 BAM6 ARASP MAPKKK17 AT2G32640 ATCB5-B ATCOP1 AtPFA-DSP2 AtGH9B8 ATSUVH2 AtCLO3 PRPL28 AT2G33550 GALS1 AtCRL2 ATUBC24 EMB3113 AT2G34060 LHB1B2 AT2G34460 AtCCP1 AT2G34590 ABR ABCC2 ATHB-14 ATFAH1 EDA3 AT2G35050 AT2G35260 GDCH AT2G35390 AT2G35410 AT2G35450 SKL2 FEI2 AT2G35640 ATCSLA07 CTF2A ATERF38 AT2G35760 scpl26 AT2G35840 AT2G35880 BLH1 NHL12 ATE2FA AT2G36145 AT2G36200 AT2G36350 DML1 AT2G36570 AT2G36630 GAMMA-TIP AtXTH32 MAT3 AT2G36950 ATSIG6 ATPAL1 AT2G37050 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 UMAMIT13 UMAMIT12 AT2G37540 AGD7 AS1 AT2G37660 AKR4C10 CAC3 AtAUX1 PSRP4 PDX1L4 ATPDX1.1 ATSCAR2 RDO2 GAUT7 ATMVD1 PIP2;6 NATA1 ATMTP11 PnsL1 Encodes a Cysteine-rich peptide (CRP) family protein RCA CYT1 AT2G39850 ATISA1 LHCB4.3 AT2G40260 AT2G40400 HEME2 ATKT2 ETG1 CYP98A3 AT2G41040 AT2G41050 AT2G41060 AT2G41130 ATCBK3 SSL2 ARR8 NTRC ATVLN2 AT2G41820 AGK1 AT2G41890 AT2G42130 AtSPL9 AT2G42220 ATBZIP34 AT2G42490 AT2G42510 ATPPC2 AT2G42690 AT2G42750 ATMPK20 ATPAO2 AT2G43030 ATLEUD1 BIO2 AT2G43500 Encodes a defensin-like (DEFL) family protein. AT2G43560 AT2G43590 FAB2 ACS1 AT2G43760 5PTase12 ATHOL1 ATHOL2 AT2G43945 MTHFR2 AT2G44230 BGLU26 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT2G44970 AT2G45180 AFO encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis AT2G45340 BEN1 CYP76C1 ATPEX16 AT2G45870 ASK20 ATHH2 CYP86A8 AT2G45990 KPHMT1 AtSLD2 AT2G46250 SPA1 AtGH3.11 ARF11 AT2G46810 PSAP PIL1 PTI1-4 SPL1 AtGolS1 ATDUF5 CER8 AT2G47440 CAO ATMYB12 PHR2 AT2G47780 AtTic20-II CRR6 DEG2 RPH1 AT3G01060 AtCGS1 AtSS2 ATCFM2 PnsL3 ATHB-1 ATCYP38 AT3G01490 ATBCA1 ATPPT2 AT3G01810 AT3G01980 AK3 ATKT4 scpl25 ATRGP1 AT3G02250 GAUT9 RAD23-3 MEE31 ATF1 AT3G02750 AT3G02820 PNT1 ATGSTF11 AtUGP1 AT3G03350 NPC3 PDE326 AT3G03770 ATMS2 APK3 emb2458 SDG31 IAA16 EMB3119 PDE181 ATWNK1 ATCYSD1 AT3G05180 AT3G05190 ATN AT3G05350 RALFL22 Encodes a defensin-like (DEFL) family protein. AIF1 ATSK12 AT3G05900 AT3G06180 EMB3004 AT3G06410 ACLB-1 GATA15 AT3G06980 AT3G07270 AT3G07320 ATCSLC06 ATPUB9 SCPL27 AT3G08030 AT3G08600 AT3G08660 AT3G08680 ATPK1 LHCB4.2 AT3G09050 ATHY2 PTAC13 Fes1A AT3G09440 AT3G09540 ATPAH1 AT3G09580 CRM3 AT3G09730 ADK1 PIP5K9 OMR1 AT3G10060 ATDFC AtLCY GYRB1 PAL4 AT3G10350 SPD1 AHB2 ABCI6 AT3G10720 AT3G10840 LSF2 AT3G10970 AtFAD7 AT3G11210 AT3G11470 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 ATHST AT3G12050 emb2738 ACT11 FAD2 AT3G12210 ATTBP2 ATHSP70 AGC1.5 PGK1 AT3G12930 AT3G13000 AT3G13040 ATSERAT2;2 AT3G13120 AT3G13180 AT3G13226 Cpn60beta2 ATKRS-2 AT3G13510 PUT4 CYP90D1 AT3G13740 BGAL1 AT3G14067 FLU AT3G14200 AT3G14205 ESM1 AT3G14220 AT3G14240 ATPME3 AT3G14330 SRF7 GOX2 GOX1 ATGSL04 CYP72A11 CYP72A15 ATMPK19 ATRHM3 AT3G14890 HEME1 IDM1 MEE35 AT3G15090 HCF243 PRPS20 SPL5 ATMT3 SPA3 ATHM4 AT3G15520 AT3G15550 AT3G15570 ADS3 MFP1 PSAH-1 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. EMB2083 ABCG29 AT3G16350 AT3G16370 JAL35 ATKINESIN-13A ATEBP AT3G16850 AAE7 LPD1 HCF107 ECT6 POK1 MAT4 ATCRSH CIPK1 HYH ATACP5 RLK902 NMT1 WOX1 NRPD2B EMB1270 AT3G18210 EMB1865 AT3G18500 ATPUB29 ATWNK6 ACT2 AT3G18870 AtTic62 AT3G19000 ATPREP1 AT3G19370 PUB25 ATCAD4 AT3G19480 IKU2 BCAT4 CBB1 AT3G19850 AT3G20015 CYP705A21 AT3G20230 AT3G20390 POLGAMMA1 AT3G20680 AT3G20790 PSBTN AtBBX32 GluTRBP 4CL5 4CL2 GLTP3 ADOF2 UGT84A2 UGT71B1 HYR1 CYCP2;1 AT3G22150 ATWNK2 AT3G22520 ATTSO1 NET1A ELIP APS1 PKP-ALPHA ATSR2 ATCFM3A AT3G23090 bHLH34 AT3G23310 ATFAO3 ATPHO1 AT3G23510 AT3G23530 HGL1 AT3G23700 ATSAHH2 GAE6 ATTOPII AT3G23930 AT3G24190 HCF101 ALDH1A AT-HSFC1 PLSP1 AT3G24715 ICK3 GAUT8 ATFKBP62 AFH1 ATGHBDH AtNIK2 AT3G25570 AAPT2 AT3G25660 AtCHUP1 AT3G25700 AOC1 AOC2 AT3G25805 LTA2 RPL15 ATPRX CYP71B22 CYP71B34 CYP71B35 CYP71B36 AT3G26450 GAMMA-TIP2 ORF02 GAPA ATSNM1 AT3G26700 CCB1 ATICE1 ATSKL1 DRB3 ATTSO2 GHS1 AT3G27320 LHCB2 ATMDAR4 RPL12 RPL12-C AT3G28040 UMAMIT47 AT3G28200 AT3G28220 AT3G28460 ABCB19 AT3G29185 ATCM1 AT3G42660 CHR38 AAO2 LTPG2 ATGSTU27 ATJ ATNIT1 AT3G44620 AtKIN14h RPL9 AT3G44970 AtXTH31 scpl48 AT3G45160 JK224 AT3G45900 ATMYB48 AT3G46370 AT3G46650 UGT76E11 PTAC16 DUT1 AT3G47070 ATPLC8 ATHSD2 PEX11B ATSMC2 CAB4 AT3G47580 PYE AT3G47650 PUB39 AT3G47830 ALDH2 ATATM AT3G48200 CYP71A25 CEP3 AT3G48420 AT3G48460 AHAS ATCXE12 DCF GSA2 AT3G49000 AT3G49220 AT3G49340 DIN11 BAM2 ATBCAT-3 AT3G49810 ARLA1C AT3G49880 OBP1 CRK AT3G50560 ICK2 AT3G50685 BEH1 OEC33 AtHB28 SRS1 GATA6 AT3G51090 AT3G51140 GMD2 F3'H AT3G51280 ATSSL4 AT3G51510 LTP5 ATWNK5 IMK2 ATG4 AT3G51950 PSRP2 CP33 AT3G52500 ACA1 AT3G52740 FTSZ2-2 BGAL2 KIPK ELL1 AT3G52960 AT3G53100 CYP97C1 ATPAL2 CYP71B5 AT3G53380 AtPIP2;1 AtPPa4 AT3G53680 PYRR AT3G53960 HCEF1 ATPTR1 AT3G54210 TBL36 AT3G54290 AT3G54390 AT3G54400 ATGR2 SETH3 LHCA1 ATGRXCP PMR6 PLA PGPS2 GSTL2 A11 PDE329 PPL1 ATTSC13 OVA1 P5CS2 ATDFD AT3G55710 SBPASE ESK1 AT3G56010 UGP3 AT3G56060 IMK3 AT3G56290 AT3G56370 CYP94D2 PPD6 AT3G56680 AT3G56760 AT3G56870 PSRP5 ACSF AT3G57020 AT3G57030 AT3G57060 AT3G57070 BPG2 PrfB3 AT3G57220 AGL16 AT3G57400 ATVLN3 AT3G57800 AT3G57830 SPL15 GIS ATWRKY69 GAUT15 IPMI1 AT3G59040 PIF5 GUN4 ACR4 AT3G59780 MTHFR1 AT3G60290 AT3G60320 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. HAT3 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. CDS5 AT3G60750 MAP65-4 AT3G61080 GAUT1 HD-GL2-1 SDR1 ATPIP1 ARATH;BSAS3;1 LHCA2 AT3G61490 AtSLD1 ATX3 AT3G61820 AT3G61870 CYP20-3 AT3G62110 CP12 AT3G62570 ATMYB11 BGLU8 APG3 ATIPT3 CYCP1;1 CSP41A OEP6 AtFAP1 AtcpRRF PLA ATMRK1 AT3G63340 OTP86 APG1 EMB3126 AT3G63510 ATCCD1 BB Conceptual translation of this open reading frame gave the sequence of a 229-residue hypothetical protein that contains the same sequence as the mature A. thaliana chloroplast luminal 19-kDa protein linked to a putative signal sequence. BRCA2(IV) UNE10 AT4G00165 YAB3 EDA8 RLK4 ATT1 ANTR2 FDM2 AtGPAT8 AT4G00560 NAD-ME2 ASKTHETA AHDP QUA3 AT4G00870 AT4G00895 MEE47 CRK41 TROL GT72B1 MGP4 AT4G01310 AT4G01460 ABC1 HEMG1 AGY1 AtSAM2 ATGPAT3 MCM7 AT-RSH1 AT4G02410 ATXT2 AT4G02530 AT4G02630 EOL1 PSAD-1 EMB3129 AT4G02940 AtRBP-DR1 AFB1 XTH9 AT4G03260 PETC ATHM2 AT4G04340 EMB2369 APR ATPC1 CPK27 ATMSRB6 ATKEA3 PDF2 AT4G05090 AtMYB74 PSBQ ATK5 Encodes a putative glycosyl hydrolase family 10 protein (xylanase). AT4G08280 ORL1 ARGAH2 APX4 AT4G09040 CRRJ A/N-InvI AT4G09630 ATPD AT4G10060 ATSPS4F ATDET1 AT4G10300 LHCB5 AT4G10390 AT4G11100 SPA2 AT4G11175 AT4G11320 ATMPK5 AT4G11410 AT4G11570 BASS5 CYP706A5 CYP706A6 Hop3 SKU5 FLA2 PSAL AT4G12830 scpl20 EPFL9 AT4G13050 SDG22 AT4G13540 AT4G13550 PTAC5 CYP83A1 AT4G13840 SHM4 ATSAHH1 SBP1 The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. KINESIN-12A PDE226 AT4G14330 AT4G14360 bHLH104 ATECI3 NF-YB3 CIPK4 APS3 ELIP2 ATTCX2 TUA6 CYP97B3 ATCCT2 AT-BETA-AMY AT4G15430 UGT84A1 UGT84A3 UGT84A4 PPD1 AT4G15545 IAGLU AtCLA1 AT4G16141 AT4G16155 PHYD SPK1 ATOPT3 AT4G16980 CLPR4 AtBAM3 AT4G17180 ATRAB1C AT4G17560 LIL3:1 AT4G17650 AT4G17740 ATTPS5 AT4G17810 MYC4 APRR2 AT4G18030 PHYE ATSS4 DEG5 TCP2 CH-42 ATWL4 AT4G18740 AT4G18810 AT4G18820 AT4G18970 CMT2 CCD4 AT4G19460 Encodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death. AK-HSDH ATPP2-A1 AAH PTAC14 BAM3 ATRAB8D AT4G20760 AT4G20820 AT4G20840 ATFAH2 GHR1 PyrD AT4G21060 ATRP1 PSBQ B120 ATM4 AT4G21650 ATML1 BGLU47 AT4G21770 ATTOM1 MSRB2 PRXR1 APR3 sks4 AKT2 AT4G22290 CYP706A1 CYP706A2 AT4G22730 ATSMO1-2 PGR5-LIKE CRK21 CRK22 PIP1;5 AT4G23670 AT4G23740 CRF2 AT4G23820 CRR31 ATCSLG3 ATCSLG1 cpHsc70-1 AT4G24350 CER2 AGL24 PGI ATHB22 TAR2 AT4G24750 AT4G24760 ATRBP31 AT4G24790 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) AT4G24930 ATHVA22D AT4G25030 ACP4 CHLM MSRA4 OTP70 AT4G25280 AT4G25290 AT4G25600 ATDTX35 B1 AT4G25830 ATCNFU3 CGA1 AtFBA7 AtFBA5 AT4G26540 AT4G26555 AGC1-2 AtWRKY20 AT4G26650 GDPDL3 AT4G26710 MAP65-2 AT4G26790 VTC2 AT4G26860 AT4G26940 FAD4 AT4G27130 ATK2 AT4G27240 AT4G27300 CIP7 AT4G27435 AtENODL2 AT4G27560 NARA5 BGLU9 AT4G28080 AT4G28180 AtMAN5 AT4G28360 AT4G28480 PSB28 AT4G28706 AT4G28740 PSAE-1 AT4G28780 emb2726 IAA27 AT4G29100 AT4G29120 ATHXK1 PFK1 AT4G29590 ACHT2 ATPAO5 AT4G29920 AT4G30020 AT4G30180 AHA2 VEL1 AR2 GAE1 AT4G30470 SARK GGP1 BRS1 PDE327 scpl29 ASHR3 AtLAP2 FAD6 ATCIPK6 AT4G31310 ACDO1 AT4G31530 HCF153 EMB2797 PGR3 ATGPX7 AT4G32000 PDE334 APX6 AT4G32330 AtCESA1 LUG AT4G32590 ATSDX1 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHB-8 ATH1 AtGLDP1 AT4G33080 AT4G33110 FAB1A AT4G33440 ATHDA14 AT4G33500 AtHMAC6 KUP5 AT4G33560 ATBCA5 AT4G33740 AT4G33760 CER4 ATOST1 CCoAOMT1 AT4G34090 SEP1 AT4G34220 ALDH3 CLB6 ATCAP1 BLH6 SSR16 ERG9 SQS2 ATVHA-C1 AT4G34730 ASE2 MRL1 AT4G34920 SLP2 AtMYB32 APX3 CAT2 HCF244 AT4G35270 AT4G35335 XCP1 AFT MCA1 AT4G36180 CYP84A1 GATA7 ALDH3F1 BGAL3 AT4G36390 AT4G36530 BEE2 ATRL3 AtPLT6 AtGGPPS11 BLH2 ACD2 CYP81H1 CYP81D5 CYP81D4 CYP81F3 ANT SQE3 XTH7 NDH-M SHM1 ATCAD6 ATCAD7 pde191 AQI ATROPGEF1 AtVAB2 AT4G38520 ATMYB4 AT4G38690 ROC1 ATPRP4 AtFBA2 AT4G39040 VHA-A3 SHL1 AT4G39150 ATSEC14 APL3 ATCAD9 ATCESA2 SAMC1 CYP96A12 ATSK2 AT4G39630 FKBP16-2 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. ATIPS1 AKN2 CYP79B2 AT4G39960 AT4G39970 DHS1 AT5G01020 LAC8 AT5G01075 AT5G01090 SQD2 AT5G01260 ATPDX1 AIRP2 LHCB4.1 AT5G01590 AT5G01890 STN8 OHP AT5G02160 AT5G02230 Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ATMTRNASEII ABCI20 AT5G02370 MT2B PLL2 AT5G02460 AT-HSC70-1 AT5G02710 AT5G02940 iqd2 AT5G03140 ATRAB AtNCS1 SBE2.2 AT5G03870 AT5G03880 54CP GYRB2 FD-GOGAT ATPAL3 ATLDA BTR1 KCS19 SIR ACR12 ATOFP13 NOL ATNAS1 AT5G04980 RUL1 ATCESA3 AT5G05180 AtCHIL AtFAD8 ATEGY2 AT5G05790 UGT76C2 AT5G05890 ATROPGEF5 AT5G06060 2-Cys ATNUDX27 TBR HAT14 AT5G07020 AT5G07030 ERL2 ATMSRA2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ATMYB29 AT5G07800 CYP75B1 AT5G08050 TCP17 BIM1 ATAIH scpl35 AT5G08390 FTRA2 AT5G08415 AT5G08430 PDE340 ATFLS1 AT5G08650 NDC1 AAP2 AtSRT2 PI-4KBETA2 AtPPa6 PMDH2 ATBX3 CESA5 PROPEP5 AT5G10020 ATMIPS3 AST68 ASN3 PAS2 AIL6 CYP81K2 AT5G10605 AT5G10690 AT5G10770 CIPK5 AT5G10960 AT5G10970 ATSPS2F HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 TINY2 ATNADP-ME2 AT5G12110 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 DiT1 AT5G12970 ATGSL12 ATCYP20-2 AT5G13140 CRN AT5G13410 IQD11 EMB3136 ABAR ATPDAT SVR3 SIG4 CCS52B ATCHS AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 AT5G14210 EMB3137 AT5G14410 AT5G14460 AT5G14500 ATSK13 ATDEF2 AT5G14700 BETA AO AT5G14910 AT5G14970 AT5G15070 GASA4 AtENODL17 AT5G15390 APG6 GAUT14 BCCP2 LNG1 AtbZIP3 AT5G15910 AT5G15950 AtNIK1 AT5G16240 VAT1 AT5G16340 BCCP ATF2 LRR1 AtMYB43 DHAR3 EMB2247 AT5G16720 AT5G16810 molecular function has not been defined, was shown involved in oxidative stress tolerance. AT5G17040 UGT78D2 ENH1 PSY AtUGP2 MEX1 AT5G17660 AT5G17670 EMB1241 PSRP6 ATCIMS AT5G18140 anac088 ATSRA1 AT5G18500 AT5G18550 ATOBGC AT5G18600 PCB2 BAM9 EMB3013 NSH3 BUD2 ADG2 AT5G19290 ATOEP80 AT5G19730 AT5G19760 AtRbcX2 AT5G19940 AT5G20050 AtHBP5 ATMGD2 ATBRXL4 AT5G20700 ATCPN21 AT5G20885 CRR42 AT5G21100 AT5G21105 AT5G21222 CIPK26 ATCKX5 ATHMA8 AT5G22020 UBP8 anac089 AT5G22340 AT5G22620 emb1211 AT5G22850 IMS3 CaS HCF136 AT5G23170 SCPL34 AT5G23280 HMGB6 AT5G23480 AT5G23820 TUB8 AT5G24010 SLAH3 ATSIG5 SQE5 AT5G24155 ATSS1 AT5G24320 PGL5 LSU2 CRY3 CYP71B12 AT5G25590 AtYUC6 BGLU37 AtTGG1 AT5G26330 PYR6 AT5G27560 ATCYSD2 DES1 ATNEK3 AT5G28300 AT5G28500 GME ARRPS1 AT5G34930 AT5G35170 AMOS1 CAC2 ATGSL1 AHK2 AT5G35970 atylmg3 AT5G36160 ATPRFB AT5G36230 ATPGLP1 AT5G36790 CAT3 AT5G37010 ARF8 WSD1 ARLA1A AT5G37790 4CL8 RBCS3B RBCS2B RBCS1B AT5G38510 AT5G38520 CRR7 UDG4 AHP3 ORTH1 DEG8 AT5G40140 CRK42 RS5 AT5G40450 AT5G40500 GPDHp RPL27 DRB5 ATUBC8 AT5G41760 AT5G42070 ATBG_PPAP FTSH5 AT5G42620 AOS AT5G42720 ATIPK1 AT5G43150 SPL2 TZP NDH18 KCS20 ARD4 AT5G44020 ABCI21 ATGLK2 TUB4 AT5G44390 AT5G44520 AT5G44530 MCM6 AT5G45170 AT5G45280 AT5G45290 BAM8 AT5G45650 AT5G45670 ATFKBP13 AT5G45720 CIPK20 CHL AtNUDT11 AT5G45950 APE2 AtLARP6a KAS1 AT5G46390 AT5G46420 BSK2 AT5G46580 bHLH071 TET1 PYL1 ATNIG1 AT5G46910 Encodes the mitochondrial ATP synthase subunit delta. LON2 LIL3:2 AT5G47190 AT5G47390 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT5G47620 NF-YB2 FPS1 GAUT4 FRA1 AMK2 ATRBOHD AT5G48220 AACT2 ADG1 AT5G48360 HINT3 ATFKBP65 AT5G48590 ATCAP-C AT5G48790 KAT5 LPA66 HCT OVA2 DDM2 AT5G49215 ATMYB111 ACLB-2 XIP1 ATGH9A1 cpHsc70-2 ATPPOX AT5G50000 AT5G50100 AT5G50110 AT5G50180 OLD5 AT5G50370 CAA33 AT5G51030 AT5G51110 AT5G51140 ATTPPA LPA2 AT5G51560 At-NEET ATPGMP AT5G52010 CRR1 CCB2 AT5G52190 EFO1 CYP96A4 SCL8 B2 ATHS83 AT5G52660 AT5G52780 ATWRKY27 AT5G52960 AT5G52970 AT5G53140 FTSH11 AT5G53340 ORG1 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 AT5G53750 AtPSKR2 TAT7 ATOMT1 PTAC15 LHCB3 CcdA AHL CRLK1 RPL24 THI1 VTC5 AT5G55180 AT5G55220 ATMAP65-1 AtIAMT1 GDPDL4 ATKCO1 CRR21 AT5G55950 AtHsp90-3 AtHsp90.2 AT5G56040 ATPEX5 AT5G56590 ILL1 AT5G56790 AT5G56840 AT5G56850 GATA21 AT5G56890 NAP1;3 LUT2 AT5G57040 CIA2 PSD2 AHA3 BIO1 AT5G57610 CER3 ADCL APO2 NPL1 AT5G58150 NdhN AT5G58330 AT5G58390 AT5G58520 AT5G58540 EOL2 FOLK ATPLC5 DDB2 AtcPT4 ftsh9 AT5G58950 AT5G59130 AT5G59250 ATUXS3 AT5G59610 AtVIP2 AT5G60270 LecRK-I.9 ARF4 ATPDX2 CLB4 ATMYB34 COB PNM1 PDCB1 PIF7 AT5G61350 EMB2728 AtMYB28 AT5G61570 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AtTudor2 AT5G61830 ARF1-BP AT5G62210 ATGT18 AT5G62350 CDF1 AHA11 AT5G62710 DXR AT5G62840 AT5G62930 BT1 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AT5G63410 ATFLS2 SNRK2-5 AT5G63700 AT5G63710 SHA1 AtBGAL10 AT5G63940 ALX8 PSAN DCT ATGCH JK218 EMB3144 CESA6 ASN2 ATPUB38 AT5G65220 ATHB-5 KAC2 BAM1 XTH6 CGR3 AT5G65840 ACR1 STR16 ATLFNR1 AT5G66230 AtMAN7 AT5G66470 AT5G66520 AT5G66530 MSP-1 ENY AT5G66770 sks17 ABA1 ICU2 EPS1 TOE3 AT5G67200 IRX15-L ATEB1C RLK ARA12 PSBA MATK RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 RPS14 PSAB PSAA YCF3 RPS4 NDHJ PSBG NDHC ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBF PSBE ORF31 PETG PSAJ RPS18 RPL20 CLPP1 PSBB PSBT PSBN PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 RPL2.1 RPL23 NDHB.1 RPS7 NDHF YCF5 NDHD NDHE NDHG NDHI NDHA NDHH RPS15 RPS7.2 NDHB.2 RPL23.2 RPL2.2 NAD9 RPL16 ATP6 NAD5 COX3
GO:0043436 oxoacid metabolic process	BP	3.215e-141	AT1G01080 PDH-E1 KCS1 ATGPAT4 AT1G01630 AT1G02150 AtSAM1 AtBE2 POR KCS2 AT1G04420 LIP2 AT1G05150 emb2394 UGT1 ATCTL1 BBX24 AT1G06550 HPD OE23 EMB2784 KCS3 ADT6 PSAO FATB ALB-1V ABC1 AVDE1 AT1G09310 CRB AtHIR1 ATBCAT-1 ACLA-1 ATFD1 CLPP6 ADT1 ATGLX1 AT1G11860 ATSRS ELP ATNRT1 AT1G12800 AFB3 GAPA-2 AOC4 AT1G13650 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14270 SBH2 AT1G14345 PSS1 AT1G15410 AT1G15710 CP24 ADAP CYP79F2 BUS1 UP6 AtHBP1 FUG1 ATSOT17 AT1G18660 LHCA2*1 KCS4 JMT ATLFNR2 CVP1 DRT112 AT1G21440 AT1G21670 AT1G22170 AOAT1 AOR UGT74B1 ASB1 CER60 Cpn60beta4 AT1G29670 PDH-E1 PSAK IMPL1 AK-HSDH PSAF FEI1 ATROPGEF14 AT1G31710 CYP97A3 ACBP PRK ACT1 PKp3 AT1G32470 PRPL11 AT1G33110 AT1G35420 ACC1 SHM7 ATNR2 expressed protein localized to the inner membrane of the chloroplast. GAPB ATSDC1 CP22 AT1G44920 ACD1 GATB AT1G49380 LACS2 GDC1 AT1G51110 AT1G51340 PSAH-2 ATBG1 mMDH1 AtFAP3 ESP ABCD2 ACP2 AtTLP18.3 ATLOX1 AT1G55260 AT1G55360 PSAG ATCSLE1 ATSERAT2;1 AT1G56190 ATNAS4 AT1G56500 ATATP-PRT1 AT1G60000 ABC4 ATB2 LHCA3 ACO2 FMO KAS AT1G62780 LACS3 BDG1 AT1G65230 FMO cICDH GAD2 ATGSR2 AT1G66430 DIN9 AT1G67280 ATLOX6 AT1G67700 ATKCR1 PSBY ATFXG1 AT1G67950 ATHPR1 AT1G68260 CER6 PSRP3/1 PHYLLO NRT1.7 AT1G70280 ATBCA4 AT1G70480 AOAT2 JAZ9 AT1G72500 AT1G72810 EDA17 LPA3 ENO1 AT1G74070 ATSOT18 ATSOT16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATKAS2 emb2184 UMAMIT5 PETE1 ACR3 AT1G77090 LACS9 AT1G78040 ATGSTU20 ATGA2OX1 ATGGH2 PSBR AtkdsA1 PGK ATNADP-ME4 RGA AT2G03420 LACS8 EMB2761 AT2G05920 ENR1 AtOPR3 AKN1 ATHNIR KCS9 ADC1 HY3 AT2G19940 AAS ALF1 LIP1 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 PLAT2 AT2G22230 AAT SCPL8 AT2G23390 ATMES7 ACL ATMES3 YCF37 AT2G24020 AT2G24060 ALDH11A3 AT2G24280 AT2G24580 AT2G25530 AT2G25830 OVA4 AtGLDP2 FDH ATDUF3 HO2 KCS11 AT2G26800 ATCDPMEK AT2G27680 ADT3 ADCS AT103-1A PY ANTR1 AtFAD3 ATFC-II CYP71A13 ATCOQ3 AT2G31670 AT2G31790 AtCLO3 PRPL28 ATFAH1 EDA3 AT2G35260 GDCH AT2G35410 SKL2 ATCSLA07 BLH1 GAMMA-TIP AT2G36950 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. UMAMIT12 AT2G37660 CAC3 PIP2;6 NATA1 PnsL1 RCA CYT1 ATKT2 NTRC AT2G42130 AT2G42220 ATPPC2 AT2G42690 AT2G43030 ATLEUD1 BIO2 AT2G43560 FAB2 ACS1 ATHOL1 MTHFR2 BGLU26 CHL-CPN10 AT2G44920 AT2G45180 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis ATPEX16 ATHH2 CYP86A8 AtSLD2 AtGH3.11 CER8 CAO PHR2 AT2G47780 CRR6 DEG2 AtCGS1 ATCYP38 ATBCA1 AK3 ATKT4 AT3G02250 ATF1 ATGSTF11 PDE326 ATMS2 EMB3119 ATCYSD1 Encodes a defensin-like (DEFL) family protein. EMB3004 AT3G06980 AT3G07270 LHCB4.2 PTAC13 ADK1 PIP5K9 OMR1 PAL4 AHB2 ABCI6 AtFAD7 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 PGK1 AT3G12930 ATSERAT2;2 AT3G13120 ATKRS-2 FLU ESM1 ATPME3 HEME1 ATHM4 AT3G15520 ADS3 MFP1 NDF4 AT3G16370 JAL35 AAE7 LPD1 ECT6 MAT4 EMB1865 AT3G19480 BCAT4 CBB1 AT3G20390 ADOF2 AT3G22520 APS1 PKP-ALPHA AT3G23700 ATSAHH2 GAE6 HCF101 PLSP1 ATGHBDH AOC1 AOC2 AT3G25805 LTA2 ATPRX AT3G26450 GAMMA-TIP2 GAPA CCB1 ATSKL1 ATMDAR4 UMAMIT47 AT3G29185 ATCM1 AAO2 LTPG2 ATNIT1 RPL9 AT3G45160 PTAC16 CAB4 AT3G47650 AHAS DCF GSA2 ATBCAT-3 AT3G50685 OEC33 AT3G51090 AT3G51140 LTP5 ATG4 PSRP2 CP33 AT3G52500 FTSZ2-2 CYP97C1 ATPAL2 AtPIP2;1 AT3G54210 AT3G54400 SETH3 ATGRXCP PGPS2 OVA1 P5CS2 ATDFD SBPASE AT3G56010 ACSF IPMI1 PIF5 GUN4 AT3G59780 MTHFR1 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. AT3G60750 ATPIP1 ARATH;BSAS3;1 AtSLD1 AT3G61870 CYP20-3 AtFAP1 AtcpRRF APG1 EMB3126 AT3G63510 ATCCD1 ATT1 NAD-ME2 TROL AT4G01310 ATXT2 AT4G02530 EOL1 PSAD-1 EMB3129 PETC EMB2369 APR ATPC1 AtMYB74 ARGAH2 APX4 ATPD AT4G10300 LHCB5 AT4G10390 BASS5 AT4G13050 CYP83A1 AT4G13840 SHM4 ATSAHH1 ATECI3 CYP97B3 IAGLU AtCLA1 CLPR4 AT4G17560 LIL3:1 AT4G17650 AT4G18030 CH-42 AK-HSDH ATRAB8D ATFAH2 ATRP1 PRXR1 ATSMO1-2 PIP1;5 AT4G23670 CER2 PGI ATHB22 TAR2 AT4G24750 ATRBP31 AT4G24930 ACP4 CHLM MSRA4 B1 AtFBA7 AtFBA5 VTC2 FAD4 ATK2 AtENODL2 NARA5 AT4G28080 PSB28 PSAE-1 emb2726 PFK1 AT4G30020 GGP1 FAD6 EMB2797 PGR3 PDE334 AtCESA1 AT4G32590 ATSDX1 ATH1 AtGLDP1 ATHDA14 KUP5 ATBCA5 AT4G33740 AT4G33760 ATOST1 CCoAOMT1 AT4G34090 SEP1 CLB6 MRL1 SLP2 HCF244 AFT MCA1 AT4G36390 AtPLT6 AtGGPPS11 CYP81F3 XTH7 SHM1 AQI ROC1 ATPRP4 AtFBA2 AT4G39040 SHL1 ATCESA2 ATSK2 ATIPS1 AKN2 CYP79B2 AT4G39970 DHS1 AT5G01020 AT5G01090 SQD2 ATPDX1 AT-HSC70-1 SBE2.2 54CP FD-GOGAT ATPAL3 ATLDA KCS19 SIR ATNAS1 ATCESA3 AtFAD8 ATEGY2 2-Cys ATNUDX27 ERL2 ATMYB29 FTRA2 AT5G08415 AT5G08430 AT5G08650 AtPPa6 PMDH2 AST68 ASN3 PAS2 AT5G10690 PPD5 ATNADP-ME2 TUB6 DiT1 AT5G12970 ATCYP20-2 AT5G13140 AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 EMB3137 AT5G14460 AT5G14500 ATDEF2 BETA AT5G14910 GASA4 BCCP2 AT5G16240 VAT1 BCCP EMB2247 PSY MEX1 ATCIMS AT5G18600 PCB2 AT5G19760 AT5G19940 ATMGD2 ATCPN21 AT5G22340 IMS3 CaS AT5G23820 BGLU37 AtTGG1 ATCYSD2 DES1 GME ARRPS1 AT5G34930 CAC2 ATGSL1 AT5G36160 CAT3 AT5G38520 UDG4 DEG8 AT5G41760 FTSH5 AOS NDH18 KCS20 AT5G44020 AT5G44520 ATFKBP13 CHL AT5G45950 APE2 KAS1 AT5G46580 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. LIL3:2 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. FRA1 AT5G48220 ADG1 KAT5 OVA2 ATGH9A1 ATPPOX AT5G50000 AT5G51110 AT5G51140 ATPGMP CRR1 B2 AT5G52960 AT5G52970 FTSH11 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 AT5G53750 RPL24 VTC5 AT5G55220 ATMAP65-1 ATPEX5 AHA3 BIO1 CER3 ADCL APO2 NPL1 AT5G58330 EOL2 LecRK-I.9 CLB4 ATMYB34 COB PDCB1 AtMYB28 AtTudor2 AT5G62210 AT5G62350 DXR ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. ALX8 PSAN DCT ASN2 STR16 ATLFNR1 AT5G66470 MSP-1 ABA1 EPS1 RPS14 ACCD NDHD NDHE
GO:0006082 organic acid metabolic process	BP	6.791e-141	AT1G01080 PDH-E1 KCS1 ATGPAT4 AT1G01630 AT1G02150 AtSAM1 AtBE2 POR KCS2 AT1G04420 LIP2 AT1G05150 emb2394 UGT1 ATCTL1 BBX24 AT1G06550 HPD OE23 EMB2784 KCS3 ADT6 PSAO FATB ALB-1V ABC1 AVDE1 AT1G09310 CRB AtHIR1 ATBCAT-1 ACLA-1 ATFD1 CLPP6 ADT1 ATGLX1 AT1G11860 ATSRS ELP ATNRT1 AT1G12800 AFB3 GAPA-2 AOC4 AT1G13650 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14270 SBH2 AT1G14345 PSS1 AT1G15410 AT1G15710 CP24 ADAP CYP79F2 BUS1 UP6 AtHBP1 FUG1 ATSOT17 AT1G18660 LHCA2*1 KCS4 JMT ATLFNR2 CVP1 DRT112 AT1G21440 AT1G21670 AT1G22170 AOAT1 AOR UGT74B1 ASB1 CER60 Cpn60beta4 AT1G29670 PDH-E1 PSAK IMPL1 AK-HSDH PSAF FEI1 ATROPGEF14 AT1G31710 CYP97A3 ACBP PRK ACT1 PKp3 AT1G32470 PRPL11 AT1G33110 AT1G35420 ACC1 SHM7 ATNR2 expressed protein localized to the inner membrane of the chloroplast. GAPB ATSDC1 CP22 AT1G44920 ACD1 GATB AT1G49380 LACS2 GDC1 AT1G51110 AT1G51340 PSAH-2 ATBG1 mMDH1 AtFAP3 ESP ABCD2 ACP2 AtTLP18.3 ATLOX1 AT1G55260 AT1G55360 PSAG ATCSLE1 ATSERAT2;1 AT1G56190 ATNAS4 AT1G56500 ATATP-PRT1 AT1G60000 ABC4 ATB2 LHCA3 ACO2 FMO KAS AT1G62780 LACS3 BDG1 AT1G65230 FMO cICDH GAD2 ATGSR2 AT1G66430 DIN9 AT1G67280 ATLOX6 AT1G67700 ATKCR1 PSBY ATFXG1 AT1G67950 ATHPR1 AT1G68260 CER6 PSRP3/1 PHYLLO NRT1.7 AT1G70280 ATBCA4 AT1G70480 AOAT2 JAZ9 AT1G72500 AT1G72810 EDA17 LPA3 ENO1 AT1G74070 ATSOT18 ATSOT16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATKAS2 emb2184 UMAMIT5 PETE1 ACR3 AT1G77090 LACS9 AT1G78040 ATGSTU20 ATGA2OX1 ATGGH2 PSBR AtkdsA1 PGK ATNADP-ME4 RGA AT2G03420 LACS8 EMB2761 AT2G05920 ENR1 AtOPR3 AKN1 ATHNIR KCS9 ADC1 HY3 AT2G19940 AAS ALF1 LIP1 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 PLAT2 AT2G22230 AAT SCPL8 AT2G23390 ATMES7 ACL ATMES3 YCF37 AT2G24020 AT2G24060 ALDH11A3 AT2G24280 AT2G24580 AT2G25530 AT2G25830 OVA4 AtGLDP2 FDH ATDUF3 HO2 KCS11 AT2G26800 ATCDPMEK AT2G27680 ADT3 ADCS AT103-1A PY ANTR1 AtFAD3 ATFC-II CYP71A13 ATCOQ3 AT2G31670 AT2G31790 AtCLO3 PRPL28 ATFAH1 EDA3 AT2G35260 GDCH AT2G35410 SKL2 ATCSLA07 BLH1 GAMMA-TIP AT2G36950 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. UMAMIT12 AT2G37660 CAC3 PIP2;6 NATA1 PnsL1 RCA CYT1 ATKT2 NTRC AT2G42130 AT2G42220 ATPPC2 AT2G42690 AT2G43030 ATLEUD1 BIO2 AT2G43560 FAB2 ACS1 ATHOL1 MTHFR2 BGLU26 CHL-CPN10 AT2G44920 AT2G45180 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis ATPEX16 ATHH2 CYP86A8 AtSLD2 AtGH3.11 CER8 CAO PHR2 AT2G47780 CRR6 DEG2 AtCGS1 ATCYP38 ATBCA1 AK3 ATKT4 AT3G02250 ATF1 ATGSTF11 PDE326 ATMS2 EMB3119 ATCYSD1 Encodes a defensin-like (DEFL) family protein. EMB3004 AT3G06980 AT3G07270 LHCB4.2 PTAC13 ADK1 PIP5K9 OMR1 PAL4 AHB2 ABCI6 AtFAD7 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 PGK1 AT3G12930 ATSERAT2;2 AT3G13120 ATKRS-2 FLU ESM1 ATPME3 HEME1 ATHM4 AT3G15520 ADS3 MFP1 NDF4 AT3G16370 JAL35 AAE7 LPD1 ECT6 MAT4 EMB1865 AT3G19480 BCAT4 CBB1 AT3G20390 ADOF2 AT3G22520 APS1 PKP-ALPHA AT3G23700 ATSAHH2 GAE6 HCF101 PLSP1 ATGHBDH AOC1 AOC2 AT3G25805 LTA2 ATPRX AT3G26450 GAMMA-TIP2 GAPA CCB1 ATSKL1 ATMDAR4 UMAMIT47 AT3G29185 ATCM1 AAO2 LTPG2 ATNIT1 RPL9 AT3G45160 PTAC16 CAB4 AT3G47650 AHAS DCF GSA2 ATBCAT-3 AT3G50685 OEC33 AT3G51090 AT3G51140 LTP5 ATG4 PSRP2 CP33 AT3G52500 FTSZ2-2 CYP97C1 ATPAL2 AtPIP2;1 AT3G54210 AT3G54400 SETH3 ATGRXCP PGPS2 OVA1 P5CS2 ATDFD SBPASE AT3G56010 ACSF IPMI1 PIF5 GUN4 AT3G59780 MTHFR1 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. AT3G60750 ATPIP1 ARATH;BSAS3;1 AtSLD1 AT3G61870 CYP20-3 AtFAP1 AtcpRRF APG1 EMB3126 AT3G63510 ATCCD1 ATT1 NAD-ME2 TROL AT4G01310 ATXT2 AT4G02530 EOL1 PSAD-1 EMB3129 PETC EMB2369 APR ATPC1 AtMYB74 ARGAH2 APX4 ATPD AT4G10300 LHCB5 AT4G10390 BASS5 AT4G13050 CYP83A1 AT4G13840 SHM4 ATSAHH1 ATECI3 CYP97B3 IAGLU AtCLA1 CLPR4 AT4G17560 LIL3:1 AT4G17650 AT4G18030 CH-42 AK-HSDH ATRAB8D ATFAH2 ATRP1 PRXR1 ATSMO1-2 PIP1;5 AT4G23670 CER2 PGI ATHB22 TAR2 AT4G24750 ATRBP31 AT4G24930 ACP4 CHLM MSRA4 B1 AtFBA7 AtFBA5 VTC2 FAD4 ATK2 AtENODL2 NARA5 AT4G28080 PSB28 PSAE-1 emb2726 PFK1 AT4G30020 GGP1 FAD6 EMB2797 PGR3 PDE334 AtCESA1 AT4G32590 ATSDX1 ATH1 AtGLDP1 ATHDA14 KUP5 ATBCA5 AT4G33740 AT4G33760 ATOST1 CCoAOMT1 AT4G34090 SEP1 CLB6 MRL1 SLP2 HCF244 AFT MCA1 AT4G36390 AtPLT6 AtGGPPS11 CYP81F3 XTH7 SHM1 AQI ROC1 ATPRP4 AtFBA2 AT4G39040 SHL1 ATCESA2 ATSK2 ATIPS1 AKN2 CYP79B2 AT4G39970 DHS1 AT5G01020 AT5G01090 SQD2 ATPDX1 AT-HSC70-1 SBE2.2 54CP FD-GOGAT ATPAL3 ATLDA KCS19 SIR ATNAS1 ATCESA3 AtFAD8 ATEGY2 2-Cys ATNUDX27 ERL2 ATMYB29 FTRA2 AT5G08415 AT5G08430 AT5G08650 AtPPa6 PMDH2 AST68 ASN3 PAS2 AT5G10690 PPD5 ATNADP-ME2 TUB6 DiT1 AT5G12970 ATCYP20-2 AT5G13140 AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 EMB3137 AT5G14460 AT5G14500 ATDEF2 BETA AT5G14910 GASA4 BCCP2 AT5G16240 VAT1 BCCP EMB2247 PSY MEX1 ATCIMS AT5G18600 PCB2 AT5G19760 AT5G19940 ATMGD2 ATCPN21 AT5G22340 IMS3 CaS AT5G23820 BGLU37 AtTGG1 ATCYSD2 DES1 GME ARRPS1 AT5G34930 CAC2 ATGSL1 AT5G36160 CAT3 AT5G38520 UDG4 DEG8 AT5G41760 FTSH5 AOS NDH18 KCS20 AT5G44020 AT5G44520 ATFKBP13 CHL AT5G45950 APE2 KAS1 AT5G46580 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. LIL3:2 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. FRA1 AT5G48220 ADG1 KAT5 OVA2 ATGH9A1 ATPPOX AT5G50000 AT5G51110 AT5G51140 ATPGMP CRR1 B2 AT5G52960 AT5G52970 FTSH11 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 AT5G53750 RPL24 VTC5 AT5G55220 ATMAP65-1 ATPEX5 AHA3 BIO1 CER3 ADCL APO2 NPL1 AT5G58330 EOL2 LecRK-I.9 CLB4 ATMYB34 COB PDCB1 AtMYB28 AtTudor2 AT5G62210 AT5G62350 DXR ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. ALX8 PSAN DCT ASN2 STR16 ATLFNR1 AT5G66470 MSP-1 ABA1 EPS1 RPS14 ACCD NDHD NDHE
GO:0015979 photosynthesis	BP	1.667e-135	LPA1 PSAD-2 FZL PSB27 POR ATHM1 AT1G05140 emb2394 LPA19 OE23 PSAO ALB-1V CRB CLPP6 ATSRS GAPA-2 PnsL2 AT1G14270 AT1G14345 CP24 NDF1 HCF173 ACR11 NDF6 LHCA2*1 ATLFNR2 AT1G26220 AT1G29700 AB180 AB165 AB140 PSAK PSAF PRK AT1G32470 RPL21C PMI1 GAPB AtcFBP CP22 Lhca5 AT1G49975 FTSH1 AT1G52220 PSAH-2 AT1G54500 AtTLP18.3 NDF5 ZKT PSAG AT1G56500 CCB4 ABC4 ATFD2 LHCA3 ATGPT2 ATSCO1 AT1G64355 NDF2 RPOD1 AT1G65230 RBCS1A AT1G67700 PSBY CSK ATHPR1 PHYLLO CRR23 LPA3 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NDH-O ATKAS2 emb2184 LQY1 PETE1 AT1G76450 AT1G76570 AT1G77090 TAPX PSBR APG2 CRR3 PQL3 AT2G04039 LHCB2 LHCB2 PGR5 PSBX OTP51 HY3 PSAE-2 ATGLK1 PSB29 PDTPI AtFBA1 SEP2 AT2G26500 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). ALB3 PBCP PSBW FTSH2 ARASP LHB1B2 EDA3 GDCH AT2G35410 SKL2 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 PIP2;6 PnsL1 RCA LHCB4.3 AT2G42220 AT2G43030 AT2G43560 AT2G43945 BGLU26 AT2G44920 AT2G45990 PSAP AtTic20-II DEG2 RPH1 PnsL3 ATCYP38 ATBCA1 EMB3119 LHCB4.2 ABCI6 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 PGK1 AT3G13120 ESM1 HCF243 ADS3 PSAH-1 NDF4 HCF107 AtTic62 PSBTN GluTRBP AT3G23700 HCF101 PLSP1 AtCHUP1 GAPA CCB1 LHCB2 PTAC16 AT3G47070 CAB4 AT3G47650 AT3G48420 OEC33 PSRP2 HCEF1 LHCA1 PPL1 SBPASE PPD6 ACSF PrfB3 GUN4 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. CDS5 LHCA2 AT3G61870 CYP20-3 CP12 CSP41A EMB3126 Conceptual translation of this open reading frame gave the sequence of a 229-residue hypothetical protein that contains the same sequence as the mature A. thaliana chloroplast luminal 19-kDa protein linked to a putative signal sequence. TROL AGY1 AT4G02530 PSAD-1 PETC ATPC1 PSBQ AT4G08280 APX4 ATPD LHCB5 PSAL PPD1 AT4G16980 LIL3:1 DEG5 CH-42 PSBQ PGR5-LIKE ACP4 CHLM NARA5 PSB28 PSAE-1 PDE327 FAD6 PDE334 AtHMAC6 SEP1 HCF244 SHM1 AtFBA2 SAMC1 LHCB4.1 STN8 OHP AT5G03880 FD-GOGAT 2-Cys AT5G08050 FTRA2 AT5G08650 AtPPa6 PMDH2 ATMIPS3 PPD5 EMB3136 ABAR EMB3137 BETA ENH1 ADG2 ATOEP80 AT5G19940 CRR42 ATHMA8 CaS HCF136 ATSIG5 AT5G27560 ARRPS1 AT5G35170 AMOS1 ATPRFB RBCS3B AT5G38520 CRR7 DEG8 FTSH5 ATGLK2 AT5G44520 AT5G45170 CHL APE2 LIL3:2 AT5G48790 AT5G51110 LPA2 CRR1 CCB2 AT5G52780 AT5G52960 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. LHCB3 LUT2 NPL1 NdhN AT5G58330 AT5G59250 CLB4 PSAN ATLFNR1 MSP-1 PSBA MATK RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 PSAB PSAA YCF3 RPS4 NDHJ PSBG NDHC ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBF PSBE ORF31 PETG PSAJ RPS18 RPL20 CLPP1 PSBB PSBT PSBN PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 NDHF YCF5 NDHD NDHE NDHG NDHI NDHA NDHH RPS15 RPL2.2
GO:0009058 biosynthetic process	BP	2.093e-135	LHY AT1G01080 KCS1 AtFKGP encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ASG4 ATGPAT4 PIP1;3 AT1G01630 AT1G02110 AT1G02150 CER1 AtSAM1 ATCSLD5 AtD27 NET1D FZL AtBE2 AT1G03590 POR ATHM1 AT1G03730 AT1G04040 KCS2 IAA3 AXR3 AT1G04420 AT1G04430 PDLP2 LIP2 AT1G04680 AT1G04800 TOR2 ATGTF2H2 AT1G05150 AT1G05170 emb2394 BT3 ATCTL1 AT1G05870 encodes a flavonol-7-O-rhamnosyltransferase involved in the formation of rhamnosylated flavonols ATMYB13 RHON1 ATGSL07 HPD encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase OE23 AtSLP1 ATF2KP ATNDI1 AT1G07280 EMB2784 ATPCNA1 AT1G07440 KCS3 GATA11 AXS2 ADT6 AT1G08280 PSAO FATB ALB-1V ABC1 AVDE1 ATSYP111 AT1G08800 AtMYB60 AT1G09310 CRB AT1G09440 iPGAM1 AtHIR1 LRR AT1G10120 ACLA-1 AT1G10740 EMB3103 ATFD1 AT1G11050 ATSS3 CLPP6 ADT1 ATGLX1 AT1G11860 ATSRS Encodes a protein that appears to have 1-amino-cyclopropane-1-carboxylic acid oxidase activity based on mutant analyses. AT1G12080 ELP ATNRT1 AT1G12800 AFB3 ICE2 GATL3 AOC4 AT1G13650 AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14270 SBH2 AT1G14345 AtMYB124 AT1G14460 AT1G14600 PSS1 CYCA2;3 AT1G15710 CP24 ATCCR1 NDF1 ADAP AT1G16080 CYP79F2 BUS1 ATMYB58 HCF173 UP6 SPS2 AtHBP1 FUG1 AT1G18060 BEE1 AT1G18440 AT1G18460 ATSOT17 AT1G18660 AtMYB47 NDF6 AT1G19140 LHCA2*1 BES1 KCS4 AT1G19490 JMT ATCLH1 BEL10 AT1G19710 ARF5 TUB5 ATLFNR2 ARAC4 CVP1 DRT112 AT1G21060 AT1G21440 ATNADK2 AGL87 AT1G22630 FB AT1G22850 AOAT1 AOR UGT74B1 ASB1 BBX15 CER60 AT1G26190 Cpn60beta4 AT1G26790 AtHB23 AT1G27120 SPL11 SRD2 ARAB-1 AT1G29070 AT1G29700 AT1G29950 PDH-E1 ARF6 PSAK AAE14 UGT78D1 AT1G30690 IMPL1 AK-HSDH PSAF FEI1 ATROPGEF14 AT1G31710 CYP97A3 ACBP PRK ACT1 KAN2 PKp3 NRT1.5 AT1G32470 GBSS1 PRPL11 AT1G33110 AT-GTL1 AT1G33600 EMB3003 AT1G35420 AT1G35560 RPL21C ACC1 AT1G36280 ATNR2 PMI1 expressed protein localized to the inner membrane of the chloroplast. GAPB AtcFBP CYCA1;1 CP22 ATMCM2 AT1G44920 AtBGAL5 ABF2 5PTASE11 DGAT3 EMB3105 ACD1 GATB AtPMEAMT ACT8 AT1G49380 LACS2 AT1G49580 AtCXE5 SCL-3 POLGAMMA2 GDC1 AT1G51110 AT1G51340 ABCG12 4CL.1 ADOF1 PSAH-2 FTM6 TCP3 mMDH1 AT1G53290 ATMUM4 ATMSRB1 AT1G53900 AT1G54290 ABCD2 AT1G54410 AT1G54500 ACP2 ATATG18H AtTLP18.3 AT1G54790 ATLOX1 AtIDD7 AT1G55260 AT1G55360 NDF5 ZKT CPN60B PSAG AT1G55690 UKL3 ATCSLE1 ATSERAT2;1 AT1G55960 HAC04 AT1G56050 AT1G56190 ATDI19 ATNAS4 AT1G56500 AT1G57770 ATATP-PRT1 AT1G58170 AtHEMA1 SQE1 ARF1 AT1G60000 DHNS ABC4 ATB2 ACLA-2 ATRECQ4B AT1G60990 AT1G61190 AT1G61300 LHCA3 AT1G61610 AT1G61660 AT1G61740 ACO2 FMO KAS AT1G62660 ATSCO1 AT1G62780 NRS/ER NRPD1 AT1G63640 AT1G64370 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. LACS3 AT1G64500 AT1G64510 BDG1 TUA1 NDF2 AMT1;2 RPOD1 G-TMT 4CL3 AT1G65070 AT1G65220 AT1G65230 ATPAO4 FMO AT1G65870 cICDH GAD2 AT1G66130 ZFP4 ATGSR2 AtMYB20 AT1G66330 RGL AT1G66430 DIN9 ATLOX6 EMB2814 AT1G67700 ATKCR1 PSBY ATFXG1 CSK AT1G67870 AT1G67950 ATHPR1 AtIDD14 AT1G68260 CER6 PSRP3/1 AT1G68600 AT1G68810 PHYLLO BIM2 FLN2 AtTCP15 HEMB1 CMT3 NRT1.7 AT1G70000 SNL4 ATCYCD1;1 AT1G70280 PG2 AT1G70550 AOAT2 JAZ9 PGM2 AT1G70985 AT1G71070 AT1G72230 AT1G72500 AT1G72810 LPA3 AT1G73110 AT1G73170 AT1G73390 ATPIN1 AT1G73600 AT1G73650 AT1G73655 AtEIL3 AT1G73740 BBX16 AT1G74070 ATSOT18 ATSOT16 ATHSP101 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G74840 ATKAS2 RPS9 emb2184 UMAMIT5 AtGH9B7 PETE1 AT1G76110 sks5 CYCB2;4 AT1G76350 AT1G76450 AtHMGR1 AT1G76570 AT1G76880 ACR3 AT1G77090 AT1G77310 LACS9 LAX3 AT1G78040 RAP2.4 ATTPPB ATGSTU20 SPS1 ATSHB ATRHM1 ATTPS1 emb1473 ATGGH2 ATLUP1 AT1G78995 PSBR ECT8 APL AtkdsA1 AT1G79630 ATNADP-ME4 CS17 AT1G80030 encodes a glycerate kinase which catalyzes the last step of photorespiration C2 cycle. NIP6 APG2 AT2G01210 MEE65 RGA ARR14 AtIDD5 STI AT2G03420 RNE LACS8 AT2G04700 FLA7 EMB2761 AT2G05920 ENR1 AtOPR3 EXGT-A1 AT2G07170 AGT AtXYP2 MCM9 AKN1 AGP9 AT2G15020 ARFB1A ATHNIR KCS9 MCM4 ADC1 ATBZIP2 AT2G18630 SCY1 HY3 ATHMA4 AT2G19940 ATCLASP ATGLK1 ALF1 LIP1 AtERF53 PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 AT2G21385 AT2G21560 ATRL2 AT2G21860 CSI1 PLAT2 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT2G22230 ATIPS2 AAT AGL22 IAA8 SCPL8 DEAR3 AT2G23360 AT2G23390 NAPRT2 ATMES3 YCF37 AT2G23690 BLH4 AT2G24060 PRPL35 PDE319 AT2G24170 ALDH11A3 AT2G24280 ATRPA2 AFR AT2G25530 ESE2 AT2G25830 OVA4 AT2G26100 ATHSFA2 CYP711A1 FDH ER ATDUF3 HO2 KCS11 AT2G26730 ATCDPMEK AGO4 LHW AT2G27290 ATNLP1 AT2G27680 ADT3 CH-CPN60A AT2G28200 DRB2 RAP2.7 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 ALB3 ADCS AT2G29180 TUB7 PY ANTR1 ATVLN1 AtFAD3 EMB3147 ATFC-II ATC4H CYP71A13 ATCOQ3 FTSH2 AT2G31040 TCP10 ATERF15 BBX25 AT2G31670 AT2G31790 ATGSL03 BAM6 AT2G32640 ATCB5-B ATCOP1 ATSUVH2 PRPL28 AT2G33550 GALS1 AtCRL2 EMB3113 AT2G34460 AT2G34590 ATHB-14 ATFAH1 EDA3 AT2G35050 AT2G35260 GDCH AT2G35390 AT2G35410 SKL2 FEI2 AT2G35640 ATCSLA07 ATERF38 AT2G35840 AT2G35880 BLH1 NHL12 ATE2FA AT2G36145 AT2G36200 AT2G36350 DML1 AT2G36630 GAMMA-TIP MAT3 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 UMAMIT12 AS1 AT2G37660 CAC3 AtAUX1 PSRP4 PDX1L4 ATPDX1.1 RDO2 GAUT7 ATMVD1 PIP2;6 ATMTP11 PnsL1 RCA CYT1 ATISA1 AT2G40260 AT2G40400 HEME2 ATKT2 ETG1 CYP98A3 AT2G41060 AT2G41130 ATCBK3 SSL2 ARR8 NTRC ATVLN2 AT2G42130 AtSPL9 AT2G42220 ATBZIP34 ATPPC2 AT2G42690 AT2G43030 ATLEUD1 BIO2 AT2G43500 Encodes a defensin-like (DEFL) family protein. AT2G43560 FAB2 ACS1 AT2G43760 AT2G44230 BGLU26 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AFO encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis BEN1 ATPEX16 AT2G45990 KPHMT1 AtSLD2 ARF11 AT2G46810 PIL1 SPL1 AtGolS1 CER8 CAO ATMYB12 PHR2 CRR6 DEG2 RPH1 AT3G01060 AtCGS1 AtSS2 PnsL3 ATHB-1 ATCYP38 ATBCA1 ATPPT2 AK3 ATKT4 ATRGP1 AT3G02250 GAUT9 ATF1 AT3G02750 AT3G02820 PNT1 ATGSTF11 AtUGP1 PDE326 AT3G03770 ATMS2 IAA16 EMB3119 PDE181 ATCYSD1 RALFL22 Encodes a defensin-like (DEFL) family protein. AIF1 AT3G06180 AT3G06410 ACLB-1 GATA15 AT3G06980 AT3G07270 ATCSLC06 AT3G08030 AT3G08660 AT3G08680 ATPK1 LHCB4.2 AT3G09050 ATHY2 PTAC13 AT3G09540 CRM3 ADK1 OMR1 ATDFC AtLCY GYRB1 PAL4 SPD1 AHB2 ABCI6 AT3G10720 LSF2 AtFAD7 AT3G11470 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 ATHST ACT11 PGK1 AT3G12930 AT3G13000 AT3G13040 ATSERAT2;2 AT3G13120 AT3G13180 ATKRS-2 AT3G13510 PUT4 CYP90D1 FLU ESM1 ATPME3 GOX2 GOX1 ATGSL04 ATRHM3 AT3G14890 HEME1 IDM1 MEE35 PRPS20 SPL5 ATMT3 ATHM4 AT3G15520 AT3G15550 AT3G15570 ADS3 MFP1 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. EMB2083 ABCG29 AT3G16350 AT3G16370 JAL35 ATKINESIN-13A ATEBP LPD1 HCF107 ECT6 POK1 MAT4 HYH ATACP5 NMT1 WOX1 NRPD2B EMB1270 EMB1865 AT3G18500 ACT2 AT3G19000 AT3G19370 ATCAD4 AT3G19480 BCAT4 CBB1 AT3G20230 AT3G20390 POLGAMMA1 AT3G20680 AtBBX32 GluTRBP 4CL5 4CL2 GLTP3 ADOF2 UGT84A2 AT3G22520 ATTSO1 ELIP APS1 PKP-ALPHA ATSR2 AT3G23090 bHLH34 ATPHO1 AT3G23510 AT3G23530 AT3G23700 ATSAHH2 GAE6 ATTOPII AT3G23930 AT3G24190 HCF101 ALDH1A AT-HSFC1 PLSP1 ICK3 GAUT8 ATFKBP62 AFH1 ATGHBDH AT3G25570 AAPT2 AT3G25660 AtCHUP1 AOC1 AOC2 AT3G25805 LTA2 RPL15 ATPRX AT3G26450 GAMMA-TIP2 ORF02 GAPA CCB1 ATICE1 ATSKL1 ATTSO2 GHS1 ATMDAR4 RPL12 RPL12-C UMAMIT47 AT3G28200 AT3G28220 AT3G28460 ABCB19 AT3G29185 ATCM1 AT3G42660 CHR38 AAO2 ATJ ATNIT1 RPL9 AT3G45160 JK224 ATMYB48 PTAC16 DUT1 CAB4 PYE AT3G47650 ATATM AT3G48200 AT3G48420 AT3G48460 AHAS DCF GSA2 AT3G49000 BAM2 ARLA1C OBP1 CRK ICK2 AT3G50685 BEH1 OEC33 AtHB28 SRS1 GATA6 AT3G51140 GMD2 F3'H AT3G51280 ATSSL4 AT3G51510 ATG4 AT3G51950 PSRP2 CP33 AT3G52500 AT3G52740 FTSZ2-2 ELL1 CYP97C1 ATPAL2 AtPIP2;1 AT3G53680 PYRR AT3G53960 HCEF1 AT3G54210 AT3G54290 AT3G54390 AT3G54400 ATGRXCP PMR6 PGPS2 A11 PDE329 ATTSC13 OVA1 P5CS2 ATDFD SBPASE ESK1 AT3G56010 UGP3 AT3G56290 AT3G56680 AT3G56760 AT3G56870 PSRP5 ACSF AT3G57020 AT3G57030 AT3G57070 PrfB3 AT3G57220 AGL16 AT3G57400 ATVLN3 AT3G57800 SPL15 GIS ATWRKY69 GAUT15 IPMI1 PIF5 GUN4 AT3G59780 AT3G60290 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. HAT3 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. CDS5 AT3G60750 MAP65-4 GAUT1 HD-GL2-1 SDR1 ARATH;BSAS3;1 AtSLD1 ATX3 AT3G61870 CYP20-3 CP12 ATMYB11 APG3 ATIPT3 CSP41A OEP6 AtcpRRF APG1 EMB3126 ATCCD1 BRCA2(IV) UNE10 AT4G00165 YAB3 AtGPAT8 AT4G00560 AT4G00870 AT4G00895 MEE47 TROL GT72B1 MGP4 AT4G01310 AT4G01460 HEMG1 AtSAM2 ATGPAT3 MCM7 ATXT2 AT4G02530 EOL1 PSAD-1 EMB3129 AFB1 PETC AT4G04340 EMB2369 APR ATPC1 CPK27 PDF2 AtMYB74 PSBQ ATK5 Encodes a putative glycosyl hydrolase family 10 protein (xylanase). APX4 ATPD ATSPS4F AT4G10300 LHCB5 AT4G10390 AT4G11175 ATMPK5 BASS5 SKU5 FLA2 AT4G13050 AT4G13540 CYP83A1 AT4G13840 ATSAHH1 The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. KINESIN-12A PDE226 AT4G14330 AT4G14360 bHLH104 NF-YB3 CIPK4 APS3 ELIP2 ATTCX2 TUA6 CYP97B3 ATCCT2 AT4G15430 UGT84A1 AtCLA1 AT4G16141 PHYD SPK1 ATOPT3 CLPR4 AtBAM3 ATRAB1C AT4G17560 LIL3:1 AT4G17650 AT4G17740 ATTPS5 AT4G17810 MYC4 APRR2 AT4G18030 PHYE ATSS4 TCP2 CH-42 AT4G18740 AT4G18820 CCD4 AT4G19460 AK-HSDH ATPP2-A1 PTAC14 BAM3 ATRAB8D AT4G20760 ATFAH2 GHR1 PyrD AT4G21060 ATRP1 ATM4 ATML1 PRXR1 sks4 AKT2 CYP706A2 ATSMO1-2 PGR5-LIKE AT4G23670 CRF2 ATCSLG3 ATCSLG1 CER2 AGL24 PGI ATHB22 TAR2 AT4G24750 ATRBP31 AT4G24790 AT4G24930 AT4G25030 ACP4 CHLM AT4G25280 B1 ATCNFU3 CGA1 AtFBA7 AtFBA5 AtWRKY20 GDPDL3 AT4G26710 MAP65-2 VTC2 AT4G26860 AT4G26940 FAD4 AT4G27130 ATK2 AT4G27240 CIP7 AT4G27435 AtENODL2 AT4G27560 NARA5 AT4G28080 AT4G28180 AT4G28360 PSB28 PSAE-1 emb2726 IAA27 AT4G29100 AT4G30020 AT4G30180 AHA2 VEL1 AT4G30470 GGP1 FAD6 AT4G31310 AT4G31530 HCF153 EMB2797 PGR3 PDE334 AT4G32330 AtCESA1 LUG AT4G32590 ATSDX1 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHB-8 ATH1 AtGLDP1 AT4G33110 FAB1A ATHDA14 AT4G33500 AtHMAC6 KUP5 AT4G33740 AT4G33760 CER4 ATOST1 CCoAOMT1 AT4G34090 SEP1 CLB6 ATCAP1 BLH6 SSR16 ERG9 SQS2 AT4G34730 ASE2 MRL1 AT4G34920 SLP2 AtMYB32 HCF244 AT4G35270 XCP1 AFT MCA1 AT4G36180 CYP84A1 GATA7 BGAL3 AT4G36390 AT4G36530 BEE2 ATRL3 AtPLT6 AtGGPPS11 BLH2 ACD2 ANT SQE3 XTH7 SHM1 ATCAD6 ATCAD7 pde191 AQI ATROPGEF1 AtVAB2 ATMYB4 AT4G38690 ROC1 ATPRP4 AtFBA2 AT4G39040 VHA-A3 ATSEC14 APL3 ATCAD9 ATCESA2 SAMC1 ATSK2 AT4G39630 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. ATIPS1 AKN2 CYP79B2 AT4G39970 DHS1 AT5G01020 AT5G01090 SQD2 AT5G01260 ATPDX1 AT5G02160 Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ABCI20 AT5G02370 PLL2 AT5G02460 AT-HSC70-1 AT5G02940 ATRAB AtNCS1 SBE2.2 AT5G03870 54CP GYRB2 FD-GOGAT ATPAL3 ATLDA KCS19 SIR ACR12 ATOFP13 ATNAS1 ATCESA3 AT5G05180 AtCHIL AtFAD8 ATEGY2 AT5G05790 2-Cys TBR HAT14 AT5G07020 ERL2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ATMYB29 CYP75B1 AT5G08050 TCP17 BIM1 ATAIH AT5G08390 FTRA2 AT5G08415 AT5G08430 PDE340 ATFLS1 AT5G08650 AAP2 AtSRT2 PI-4KBETA2 AtPPa6 PMDH2 CESA5 PROPEP5 ATMIPS3 AST68 ASN3 PAS2 AIL6 AT5G10690 AT5G10970 ATSPS2F HY5 OCP3 PPD5 AtMYB3R4 TINY2 ATNADP-ME2 AT5G12110 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 DiT1 AT5G12970 ATGSL12 ATCYP20-2 AT5G13140 IQD11 EMB3136 ABAR SIG4 CCS52B ATCHS AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 EMB3137 AT5G14410 AT5G14460 AT5G14500 ATDEF2 AT5G14700 BETA AO AT5G14910 AT5G14970 GASA4 AtENODL17 GAUT14 BCCP2 LNG1 AtbZIP3 AT5G15910 AT5G15950 AtNIK1 AT5G16240 VAT1 BCCP LRR1 AtMYB43 EMB2247 UGT78D2 PSY AtUGP2 MEX1 PSRP6 ATCIMS anac088 ATSRA1 AT5G18550 PCB2 BAM9 BUD2 ADG2 AT5G19290 AT5G19730 AT5G19940 AtHBP5 ATMGD2 AT5G20700 ATCPN21 AT5G20885 AT5G21100 AT5G21105 ATHMA8 AT5G22020 anac089 AT5G22340 emb1211 IMS3 CaS HCF136 AT5G23280 HMGB6 AT5G23480 TUB8 SLAH3 ATSIG5 SQE5 AT5G24155 ATSS1 AT5G24320 LSU2 CRY3 AT5G25590 AtYUC6 AT5G26330 AT5G27560 ATCYSD2 DES1 AT5G28300 AT5G28500 GME ARRPS1 AT5G34930 AT5G35170 AMOS1 CAC2 ATGSL1 AHK2 atylmg3 AT5G36160 ATPRFB AT5G36230 CAT3 AT5G37010 ARF8 WSD1 ARLA1A AT5G38520 CRR7 UDG4 ORTH1 DEG8 RS5 AT5G40450 AT5G40500 GPDHp RPL27 ATUBC8 AT5G41760 AT5G42070 FTSH5 AOS ATIPK1 SPL2 TZP NDH18 KCS20 AT5G44020 ABCI21 ATGLK2 TUB4 AT5G44520 MCM6 AT5G45280 AT5G45290 ATFKBP13 AT5G45720 CHL AtNUDT11 APE2 KAS1 AT5G46420 BSK2 AT5G46580 bHLH071 TET1 PYL1 ATNIG1 AT5G46910 Encodes the mitochondrial ATP synthase subunit delta. AT5G47190 AT5G47390 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. NF-YB2 FPS1 GAUT4 FRA1 AMK2 AACT2 ADG1 ATFKBP65 AT5G48590 ATCAP-C KAT5 HCT OVA2 DDM2 ATMYB111 ACLB-2 XIP1 ATGH9A1 ATPPOX AT5G50000 AT5G50100 OLD5 AT5G51110 AT5G51140 ATTPPA LPA2 ATPGMP AT5G52010 CRR1 EFO1 SCL8 B2 AT5G52660 ATWRKY27 AT5G52960 AT5G52970 FTSH11 AT5G53340 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 AT5G53750 TAT7 ATOMT1 PTAC15 RPL24 THI1 VTC5 AT5G55220 ATMAP65-1 AtIAMT1 ATKCO1 CRR21 AT5G55950 AT5G56040 AT5G56840 GATA21 LUT2 CIA2 PSD2 AHA3 BIO1 CER3 ADCL APO2 NPL1 NdhN AT5G58330 AT5G58520 AT5G58540 EOL2 FOLK AtcPT4 AtVIP2 ARF4 ATPDX2 CLB4 ATMYB34 COB PNM1 PDCB1 PIF7 AtMYB28 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AtTudor2 ARF1-BP AT5G62210 ATGT18 CDF1 AHA11 DXR BT1 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. ATFLS2 AT5G63700 AT5G63710 SHA1 ALX8 PSAN ATGCH JK218 CESA6 ASN2 AT5G65220 ATHB-5 KAC2 BAM1 STR16 ATLFNR1 AT5G66230 AT5G66470 MSP-1 ENY AT5G66770 ABA1 ICU2 EPS1 TOE3 AT5G67200 IRX15-L PSBA MATK RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 RPS14 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBF PSBE ORF31 PETG PSAJ RPS18 RPL20 CLPP1 PSBB PSBT PSBN PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 RPL2.1 RPL23 RPS7 YCF5 NDHD NDHE NDHG NDHI NDHA RPS15 RPS7.2 RPL23.2 RPL2.2 NAD9 RPL16 ATP6
GO:1901576 organic substance biosynthetic process	BP	5.834e-133	LHY AT1G01080 KCS1 AtFKGP encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ASG4 ATGPAT4 PIP1;3 AT1G01630 AT1G02110 AT1G02150 CER1 AtSAM1 ATCSLD5 AtD27 NET1D FZL AtBE2 AT1G03590 POR ATHM1 AT1G03730 AT1G04040 KCS2 IAA3 AXR3 AT1G04420 AT1G04430 PDLP2 LIP2 AT1G04680 AT1G04800 TOR2 ATGTF2H2 AT1G05150 AT1G05170 emb2394 BT3 ATCTL1 AT1G05870 encodes a flavonol-7-O-rhamnosyltransferase involved in the formation of rhamnosylated flavonols ATMYB13 RHON1 ATGSL07 HPD encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase OE23 AtSLP1 ATF2KP ATNDI1 AT1G07280 EMB2784 ATPCNA1 AT1G07440 KCS3 GATA11 AXS2 ADT6 AT1G08280 PSAO FATB ALB-1V ABC1 AVDE1 ATSYP111 AT1G08800 AtMYB60 AT1G09310 CRB AT1G09440 iPGAM1 AtHIR1 LRR AT1G10120 ACLA-1 AT1G10740 EMB3103 ATFD1 AT1G11050 ATSS3 CLPP6 ADT1 ATGLX1 AT1G11860 ATSRS Encodes a protein that appears to have 1-amino-cyclopropane-1-carboxylic acid oxidase activity based on mutant analyses. AT1G12080 ELP ATNRT1 AT1G12800 AFB3 ICE2 GATL3 AOC4 AT1G13650 AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14270 SBH2 AT1G14345 AtMYB124 AT1G14460 AT1G14600 PSS1 CYCA2;3 AT1G15710 CP24 ATCCR1 NDF1 ADAP AT1G16080 CYP79F2 BUS1 ATMYB58 HCF173 UP6 SPS2 AtHBP1 FUG1 AT1G18060 BEE1 AT1G18440 AT1G18460 ATSOT17 AT1G18660 AtMYB47 NDF6 AT1G19140 LHCA2*1 BES1 KCS4 AT1G19490 JMT ATCLH1 BEL10 AT1G19710 ARF5 TUB5 ATLFNR2 ARAC4 CVP1 DRT112 AT1G21060 AT1G21440 ATNADK2 AGL87 AT1G22630 FB AT1G22850 AOAT1 AOR UGT74B1 ASB1 BBX15 CER60 Cpn60beta4 AT1G26790 AtHB23 AT1G27120 SPL11 SRD2 ARAB-1 AT1G29070 AT1G29700 AT1G29950 PDH-E1 ARF6 PSAK AAE14 UGT78D1 AT1G30690 IMPL1 AK-HSDH PSAF FEI1 ATROPGEF14 AT1G31710 CYP97A3 ACBP PRK ACT1 KAN2 PKp3 NRT1.5 AT1G32470 GBSS1 PRPL11 AT1G33110 AT-GTL1 AT1G33600 EMB3003 AT1G35420 AT1G35560 RPL21C ACC1 AT1G36280 PMI1 expressed protein localized to the inner membrane of the chloroplast. GAPB AtcFBP CYCA1;1 CP22 ATMCM2 AT1G44920 AtBGAL5 ABF2 5PTASE11 DGAT3 EMB3105 ACD1 GATB AtPMEAMT ACT8 AT1G49380 LACS2 AT1G49580 AtCXE5 SCL-3 POLGAMMA2 GDC1 AT1G51110 AT1G51340 4CL.1 ADOF1 PSAH-2 FTM6 TCP3 mMDH1 AT1G53290 ATMUM4 ATMSRB1 AT1G53900 AT1G54290 ABCD2 AT1G54500 ACP2 ATATG18H AtTLP18.3 AT1G54790 ATLOX1 AtIDD7 AT1G55260 AT1G55360 NDF5 ZKT CPN60B PSAG UKL3 ATCSLE1 ATSERAT2;1 AT1G55960 HAC04 AT1G56050 AT1G56190 ATDI19 ATNAS4 AT1G56500 AT1G57770 ATATP-PRT1 AT1G58170 AtHEMA1 SQE1 ARF1 AT1G60000 DHNS ABC4 ATB2 ACLA-2 ATRECQ4B AT1G61190 AT1G61300 LHCA3 AT1G61610 AT1G61660 AT1G61740 ACO2 FMO KAS AT1G62660 ATSCO1 AT1G62780 NRS/ER NRPD1 AT1G63640 AT1G64370 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. LACS3 AT1G64500 AT1G64510 BDG1 TUA1 NDF2 AMT1;2 RPOD1 G-TMT 4CL3 AT1G65070 AT1G65220 AT1G65230 ATPAO4 FMO AT1G65870 cICDH GAD2 AT1G66130 ZFP4 ATGSR2 AtMYB20 AT1G66330 RGL AT1G66430 DIN9 ATLOX6 EMB2814 AT1G67700 ATKCR1 PSBY ATFXG1 CSK AT1G67870 AT1G67950 ATHPR1 AtIDD14 AT1G68260 CER6 PSRP3/1 AT1G68600 AT1G68810 PHYLLO BIM2 FLN2 AtTCP15 HEMB1 CMT3 NRT1.7 AT1G70000 SNL4 ATCYCD1;1 AT1G70280 PG2 AT1G70550 AOAT2 JAZ9 PGM2 AT1G70985 AT1G71070 AT1G72230 AT1G72500 AT1G72810 LPA3 AT1G73110 AT1G73170 AT1G73390 ATPIN1 AT1G73600 AT1G73650 AT1G73655 AtEIL3 AT1G73740 BBX16 AT1G74070 ATSOT18 ATSOT16 ATHSP101 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G74840 ATKAS2 RPS9 emb2184 UMAMIT5 AtGH9B7 PETE1 AT1G76110 sks5 CYCB2;4 AT1G76350 AT1G76450 AtHMGR1 AT1G76570 AT1G76880 ACR3 AT1G77090 AT1G77310 LACS9 LAX3 AT1G78040 RAP2.4 ATTPPB ATGSTU20 SPS1 ATSHB ATRHM1 ATTPS1 emb1473 ATGGH2 ATLUP1 AT1G78995 PSBR ECT8 APL AtkdsA1 AT1G79630 ATNADP-ME4 CS17 AT1G80030 NIP6 APG2 AT2G01210 MEE65 RGA ARR14 AtIDD5 AT2G03420 RNE LACS8 AT2G04700 FLA7 EMB2761 AT2G05920 ENR1 AtOPR3 EXGT-A1 AT2G07170 AtXYP2 MCM9 AKN1 AGP9 AT2G15020 ARFB1A ATHNIR KCS9 MCM4 ADC1 ATBZIP2 AT2G18630 SCY1 HY3 ATHMA4 AT2G19940 ATCLASP ATGLK1 ALF1 LIP1 AtERF53 PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 AT2G21385 AT2G21560 ATRL2 AT2G21860 CSI1 PLAT2 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT2G22230 ATIPS2 AAT AGL22 IAA8 SCPL8 DEAR3 AT2G23360 AT2G23390 NAPRT2 ATMES3 YCF37 AT2G23690 BLH4 AT2G24060 PRPL35 PDE319 AT2G24170 ALDH11A3 AT2G24280 ATRPA2 AFR AT2G25530 ESE2 AT2G25830 OVA4 AT2G26100 ATHSFA2 CYP711A1 FDH ER ATDUF3 HO2 KCS11 AT2G26730 ATCDPMEK AGO4 LHW AT2G27290 ATNLP1 AT2G27680 ADT3 AT2G28200 DRB2 RAP2.7 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 ALB3 ADCS AT2G29180 TUB7 PY ANTR1 ATVLN1 AtFAD3 EMB3147 ATFC-II ATC4H CYP71A13 ATCOQ3 FTSH2 AT2G31040 TCP10 ATERF15 BBX25 AT2G31670 AT2G31790 ATGSL03 BAM6 AT2G32640 ATCB5-B ATCOP1 ATSUVH2 PRPL28 AT2G33550 GALS1 AtCRL2 EMB3113 AT2G34460 AT2G34590 ATHB-14 ATFAH1 EDA3 AT2G35050 AT2G35260 GDCH AT2G35390 AT2G35410 SKL2 FEI2 AT2G35640 ATCSLA07 ATERF38 AT2G35840 AT2G35880 BLH1 NHL12 ATE2FA AT2G36145 AT2G36200 AT2G36350 DML1 AT2G36630 GAMMA-TIP MAT3 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 UMAMIT12 AS1 AT2G37660 CAC3 AtAUX1 PSRP4 PDX1L4 ATPDX1.1 RDO2 GAUT7 ATMVD1 PIP2;6 ATMTP11 PnsL1 RCA CYT1 ATISA1 AT2G40260 AT2G40400 HEME2 ATKT2 ETG1 CYP98A3 AT2G41060 AT2G41130 ATCBK3 SSL2 ARR8 NTRC ATVLN2 AT2G42130 AtSPL9 AT2G42220 ATBZIP34 ATPPC2 AT2G42690 AT2G43030 ATLEUD1 BIO2 AT2G43500 Encodes a defensin-like (DEFL) family protein. AT2G43560 FAB2 ACS1 AT2G43760 AT2G44230 BGLU26 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis BEN1 ATPEX16 AT2G45990 KPHMT1 AtSLD2 ARF11 AT2G46810 PIL1 SPL1 AtGolS1 CER8 CAO ATMYB12 PHR2 CRR6 DEG2 AT3G01060 AtCGS1 AtSS2 PnsL3 ATHB-1 ATCYP38 ATBCA1 ATPPT2 AK3 ATKT4 ATRGP1 AT3G02250 GAUT9 ATF1 AT3G02750 AT3G02820 PNT1 ATGSTF11 AtUGP1 PDE326 AT3G03770 ATMS2 IAA16 EMB3119 PDE181 ATCYSD1 RALFL22 Encodes a defensin-like (DEFL) family protein. AIF1 AT3G06180 AT3G06410 ACLB-1 GATA15 AT3G06980 AT3G07270 ATCSLC06 AT3G08030 AT3G08660 AT3G08680 ATPK1 LHCB4.2 AT3G09050 ATHY2 PTAC13 AT3G09540 CRM3 ADK1 OMR1 AtLCY GYRB1 PAL4 SPD1 AHB2 ABCI6 AT3G10720 LSF2 AtFAD7 AT3G11470 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 ATHST ACT11 PGK1 AT3G12930 AT3G13000 AT3G13040 ATSERAT2;2 AT3G13120 AT3G13180 ATKRS-2 AT3G13510 PUT4 CYP90D1 FLU ESM1 ATPME3 ATGSL04 ATRHM3 AT3G14890 HEME1 IDM1 MEE35 PRPS20 SPL5 ATMT3 ATHM4 AT3G15520 AT3G15550 AT3G15570 ADS3 MFP1 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. EMB2083 ABCG29 AT3G16350 AT3G16370 JAL35 ATEBP LPD1 HCF107 ECT6 POK1 MAT4 HYH ATACP5 NMT1 WOX1 NRPD2B EMB1270 EMB1865 AT3G18500 ACT2 AT3G19000 AT3G19370 ATCAD4 AT3G19480 BCAT4 CBB1 AT3G20230 AT3G20390 POLGAMMA1 AT3G20680 AtBBX32 GluTRBP 4CL5 4CL2 GLTP3 ADOF2 UGT84A2 AT3G22520 ATTSO1 ELIP APS1 PKP-ALPHA ATSR2 AT3G23090 bHLH34 ATPHO1 AT3G23510 AT3G23530 AT3G23700 ATSAHH2 GAE6 ATTOPII AT3G23930 AT3G24190 HCF101 ALDH1A AT-HSFC1 PLSP1 ICK3 GAUT8 ATFKBP62 AFH1 ATGHBDH AT3G25570 AAPT2 AT3G25660 AtCHUP1 AOC1 AOC2 AT3G25805 LTA2 RPL15 ATPRX AT3G26450 GAMMA-TIP2 ORF02 GAPA CCB1 ATICE1 ATSKL1 ATTSO2 GHS1 ATMDAR4 RPL12 RPL12-C UMAMIT47 AT3G28200 AT3G28220 AT3G28460 ABCB19 AT3G29185 ATCM1 AT3G42660 CHR38 AAO2 ATJ ATNIT1 RPL9 AT3G45160 JK224 ATMYB48 PTAC16 DUT1 CAB4 PYE AT3G47650 ATATM AT3G48200 AT3G48420 AT3G48460 AHAS DCF GSA2 AT3G49000 BAM2 ARLA1C OBP1 CRK ICK2 AT3G50685 BEH1 OEC33 AtHB28 SRS1 GATA6 AT3G51140 GMD2 F3'H AT3G51280 ATSSL4 AT3G51510 ATG4 AT3G51950 PSRP2 CP33 AT3G52500 AT3G52740 FTSZ2-2 ELL1 CYP97C1 ATPAL2 AtPIP2;1 AT3G53680 PYRR AT3G53960 HCEF1 AT3G54210 AT3G54290 AT3G54390 AT3G54400 ATGRXCP PMR6 PGPS2 A11 PDE329 ATTSC13 OVA1 P5CS2 ATDFD SBPASE ESK1 AT3G56010 UGP3 AT3G56290 AT3G56680 AT3G56760 AT3G56870 PSRP5 ACSF AT3G57020 AT3G57030 AT3G57070 PrfB3 AT3G57220 AGL16 AT3G57400 ATVLN3 AT3G57800 SPL15 GIS ATWRKY69 GAUT15 IPMI1 PIF5 GUN4 AT3G59780 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. HAT3 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. CDS5 AT3G60750 MAP65-4 GAUT1 HD-GL2-1 SDR1 ARATH;BSAS3;1 AtSLD1 ATX3 AT3G61870 CYP20-3 CP12 ATMYB11 APG3 CSP41A OEP6 AtcpRRF APG1 EMB3126 ATCCD1 BRCA2(IV) UNE10 AT4G00165 YAB3 AtGPAT8 AT4G00560 AT4G00870 AT4G00895 MEE47 TROL GT72B1 MGP4 AT4G01310 AT4G01460 HEMG1 AtSAM2 ATGPAT3 MCM7 ATXT2 AT4G02530 EOL1 PSAD-1 EMB3129 AFB1 PETC AT4G04340 EMB2369 APR ATPC1 CPK27 PDF2 AtMYB74 ATK5 Encodes a putative glycosyl hydrolase family 10 protein (xylanase). APX4 ATPD ATSPS4F AT4G10300 LHCB5 AT4G10390 AT4G11175 ATMPK5 BASS5 SKU5 FLA2 AT4G13050 AT4G13540 CYP83A1 AT4G13840 ATSAHH1 The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. KINESIN-12A PDE226 AT4G14330 AT4G14360 bHLH104 NF-YB3 APS3 ELIP2 ATTCX2 TUA6 CYP97B3 ATCCT2 AT4G15430 UGT84A1 AtCLA1 AT4G16141 PHYD SPK1 ATOPT3 CLPR4 AtBAM3 ATRAB1C AT4G17560 LIL3:1 AT4G17650 AT4G17740 ATTPS5 AT4G17810 MYC4 APRR2 AT4G18030 PHYE ATSS4 TCP2 CH-42 AT4G18740 AT4G18820 CCD4 AT4G19460 AK-HSDH ATPP2-A1 PTAC14 BAM3 ATRAB8D AT4G20760 ATFAH2 GHR1 PyrD AT4G21060 ATRP1 ATM4 ATML1 PRXR1 sks4 AKT2 CYP706A2 ATSMO1-2 PGR5-LIKE AT4G23670 CRF2 ATCSLG3 ATCSLG1 CER2 AGL24 PGI ATHB22 TAR2 AT4G24750 ATRBP31 AT4G24790 AT4G24930 AT4G25030 ACP4 CHLM AT4G25280 B1 CGA1 AtFBA7 AtFBA5 AtWRKY20 GDPDL3 AT4G26710 MAP65-2 VTC2 AT4G26860 AT4G26940 FAD4 AT4G27130 ATK2 AT4G27240 CIP7 AT4G27435 AtENODL2 AT4G27560 NARA5 AT4G28080 AT4G28180 AT4G28360 PSB28 PSAE-1 emb2726 IAA27 AT4G29100 AT4G30020 AT4G30180 AHA2 AT4G30470 GGP1 FAD6 AT4G31310 AT4G31530 HCF153 EMB2797 PGR3 PDE334 AT4G32330 AtCESA1 LUG AT4G32590 ATSDX1 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHB-8 ATH1 AtGLDP1 AT4G33110 ATHDA14 AT4G33500 AtHMAC6 KUP5 AT4G33740 AT4G33760 ATOST1 CCoAOMT1 AT4G34090 SEP1 CLB6 ATCAP1 BLH6 SSR16 ERG9 SQS2 AT4G34730 ASE2 MRL1 AT4G34920 SLP2 AtMYB32 HCF244 AT4G35270 XCP1 AFT MCA1 AT4G36180 CYP84A1 GATA7 BGAL3 AT4G36390 AT4G36530 BEE2 ATRL3 AtPLT6 AtGGPPS11 BLH2 ACD2 ANT SQE3 XTH7 SHM1 ATCAD6 ATCAD7 pde191 AQI ATROPGEF1 AtVAB2 ATMYB4 AT4G38690 ROC1 ATPRP4 AtFBA2 AT4G39040 VHA-A3 ATSEC14 APL3 ATCAD9 ATCESA2 SAMC1 ATSK2 AT4G39630 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. ATIPS1 AKN2 CYP79B2 AT4G39970 DHS1 AT5G01020 AT5G01090 SQD2 AT5G01260 ATPDX1 AT5G02160 Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ABCI20 AT5G02370 PLL2 AT5G02460 AT-HSC70-1 AT5G02940 ATRAB AtNCS1 SBE2.2 AT5G03870 54CP GYRB2 FD-GOGAT ATLDA KCS19 SIR ACR12 ATOFP13 ATNAS1 ATCESA3 AT5G05180 AtCHIL AtFAD8 ATEGY2 AT5G05790 2-Cys TBR HAT14 AT5G07020 ERL2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ATMYB29 CYP75B1 AT5G08050 TCP17 BIM1 ATAIH FTRA2 AT5G08415 AT5G08430 PDE340 ATFLS1 AT5G08650 AAP2 AtSRT2 PI-4KBETA2 AtPPa6 PMDH2 CESA5 PROPEP5 ATMIPS3 AST68 ASN3 PAS2 AIL6 AT5G10690 AT5G10970 ATSPS2F HY5 OCP3 PPD5 AtMYB3R4 TINY2 ATNADP-ME2 AT5G12110 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 DiT1 AT5G12970 ATGSL12 ATCYP20-2 AT5G13140 IQD11 EMB3136 ABAR SIG4 CCS52B ATCHS AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 EMB3137 AT5G14410 AT5G14460 AT5G14500 ATDEF2 AT5G14700 BETA AO AT5G14910 AT5G14970 GASA4 AtENODL17 GAUT14 BCCP2 LNG1 AtbZIP3 AT5G15910 AT5G15950 AtNIK1 AT5G16240 VAT1 BCCP LRR1 AtMYB43 EMB2247 UGT78D2 PSY AtUGP2 MEX1 PSRP6 ATCIMS anac088 ATSRA1 AT5G18550 PCB2 BAM9 BUD2 ADG2 AT5G19290 AT5G19730 AT5G19940 AtHBP5 ATMGD2 AT5G20700 ATCPN21 AT5G20885 AT5G21100 AT5G21105 ATHMA8 AT5G22020 anac089 AT5G22340 IMS3 CaS HCF136 AT5G23280 HMGB6 AT5G23480 TUB8 SLAH3 ATSIG5 SQE5 AT5G24155 ATSS1 LSU2 CRY3 AT5G25590 AT5G26330 AT5G27560 ATCYSD2 DES1 AT5G28300 AT5G28500 GME ARRPS1 AT5G34930 AT5G35170 AMOS1 CAC2 ATGSL1 AHK2 atylmg3 AT5G36160 ATPRFB AT5G36230 CAT3 AT5G37010 ARF8 AT5G38520 CRR7 UDG4 ORTH1 DEG8 RS5 AT5G40450 AT5G40500 GPDHp RPL27 ATUBC8 AT5G41760 AT5G42070 FTSH5 AOS ATIPK1 SPL2 TZP NDH18 KCS20 AT5G44020 ABCI21 ATGLK2 TUB4 AT5G44520 MCM6 AT5G45280 AT5G45290 ATFKBP13 AT5G45720 CHL AtNUDT11 APE2 KAS1 AT5G46420 BSK2 AT5G46580 bHLH071 TET1 PYL1 ATNIG1 AT5G46910 Encodes the mitochondrial ATP synthase subunit delta. AT5G47190 AT5G47390 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. NF-YB2 FPS1 GAUT4 FRA1 AMK2 AACT2 ADG1 ATFKBP65 AT5G48590 ATCAP-C KAT5 HCT OVA2 DDM2 ATMYB111 ACLB-2 XIP1 ATGH9A1 ATPPOX AT5G50000 AT5G50100 OLD5 AT5G51110 AT5G51140 ATTPPA LPA2 ATPGMP AT5G52010 CRR1 EFO1 SCL8 B2 AT5G52660 ATWRKY27 AT5G52960 AT5G52970 FTSH11 AT5G53340 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 AT5G53750 TAT7 ATOMT1 PTAC15 RPL24 THI1 VTC5 AT5G55220 ATMAP65-1 AtIAMT1 ATKCO1 CRR21 AT5G55950 AT5G56040 AT5G56840 GATA21 LUT2 CIA2 PSD2 AHA3 BIO1 CER3 ADCL APO2 NPL1 NdhN AT5G58330 AT5G58520 AT5G58540 EOL2 FOLK AtcPT4 AtVIP2 ARF4 ATPDX2 CLB4 ATMYB34 COB PNM1 PDCB1 PIF7 AtMYB28 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AtTudor2 ARF1-BP AT5G62210 ATGT18 CDF1 AHA11 DXR BT1 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. ATFLS2 AT5G63700 AT5G63710 SHA1 ALX8 PSAN ATGCH JK218 CESA6 ASN2 AT5G65220 ATHB-5 KAC2 BAM1 STR16 ATLFNR1 AT5G66230 AT5G66470 MSP-1 ENY AT5G66770 ABA1 ICU2 EPS1 TOE3 AT5G67200 IRX15-L PSBA MATK RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 RPS14 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBF PSBE ORF31 PETG PSAJ RPS18 RPL20 CLPP1 PSBB PSBT PSBN PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 RPL2.1 RPL23 RPS7 YCF5 NDHD NDHE NDHG NDHI NDHA RPS15 RPS7.2 RPL23.2 RPL2.2 RPL16 ATP6
GO:1901564 organonitrogen compound metabolic proces...	BP	6.167e-126	AT1G01630 AtSAM1 FZL POR ATHM1 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase LIP2 AT1G05150 emb2394 LPA19 UGT1 ATCTL1 HPD OE23 EMB2784 AT1G07440 ADT6 PSAO ALB-1V ABC1 AVDE1 AT1G09310 CRB AtHIR1 ATBCAT-1 ATGSTU18 ATGSTU17 ACLA-1 ATFD1 CLPP6 ADT1 ATGLX1 AT1G11860 ATSRS ELP AT1G12800 AFB3 PnsL2 SBH2 AT1G14345 PSS1 AT1G15410 AT1G15710 CP24 NDF1 AT1G16080 GLYR2 AT1G18060 AT1G18440 ATSOT17 NDF6 LHCA2*1 ATCLH1 ATLFNR2 DRT112 ATNADK2 AT1G22630 AOAT1 AOR UGT74B1 ASB1 ATSOFL1 PDH-E1 PSAK AK-HSDH PSAF ATROPGEF14 AT1G31710 CYP97A3 ACBP PRK ATNSI ACT1 NRT1.5 AT1G32470 PRPL11 AT1G33110 AT1G33700 EMB2756 AT1G35420 AT1G36280 SHM7 expressed protein localized to the inner membrane of the chloroplast. GAPB ATSDC1 CP22 ACD1 GATB AtPMEAMT FTSH1 GDC1 AT1G51110 4CL.1 PSAH-2 AtTLP18.3 AT1G55260 AT1G55360 PSAG ATCSLE1 ATSERAT2;1 AT1G56050 AT1G56190 ATNAS4 ATATP-PRT1 AtHEMA1 SQE1 AT1G60000 LHCA3 AT1G62250 ACO2 FMO AT1G62660 ATSCO1 AT1G62780 NDF2 AT1G65230 ATPAO4 FMO cICDH GAD2 ATGSR2 AT1G66430 AT1G67700 ATKCR1 PSBY AT1G67950 ATHPR1 AT1G68260 CER6 ATSOFL2 PHYLLO FLN2 HEMB1 AT1G70280 AOAT2 ABCB26 CRR23 AT1G70770 AT1G71480 AT1G72500 AT1G72810 LPA3 SPPA ATSOT18 ATSOT16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATKAS2 emb2184 UMAMIT5 LQY1 AtVAB1 PETE1 AT1G76450 AtHMGR1 AT1G76570 ACR3 AT1G77090 AT1G78040 ATGSTU20 ATGGH2 PSBR RPI2 EMB2761 AT2G05920 AtOPR3 AT2G07689 AT2G14910 ATHNIR ADC1 ATHMA4 AT2G19940 AAS ATGLK1 ALF1 LIP1 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA AtFBA1 AT2G21960 AT2G22230 ATIPS2 AAT SCPL8 NAPRT2 ATMES3 YCF37 AT2G24060 PRPL35 ALDH11A3 AT2G24580 AT2G25830 OVA4 AtGLDP2 ATDUF3 HO2 AT2G26800 ATCDPMEK ATNLP1 AT2G27680 ADT3 ADCS PY ATFC-II CYP71A13 ATCOQ3 FTSH2 AT2G31670 EDA3 GDCH AT2G35390 AT2G35410 SKL2 AT2G35760 BLH1 AT2G36145 GAMMA-TIP MAT3 AT2G36950 ATPAL1 AT2G37660 PDX1L4 ATPDX1.1 NATA1 PnsL1 AT2G40400 HEME2 ATKT2 SSL2 NTRC ATVLN2 AGK1 AT2G42220 AT2G42490 AT2G42690 ATPAO2 AT2G43030 ATLEUD1 BIO2 AT2G43560 FAB2 ACS1 AT2G43760 MTHFR2 BGLU26 CHL-CPN10 AT2G44920 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis KPHMT1 PSAP CAO CRR6 AtCGS1 ATHB-1 ATCYP38 ATBCA1 AK3 ATF1 ATGSTF11 PDE326 ATMS2 EMB3119 ATCYSD1 RALFL22 AT3G07270 AT3G08030 LHCB4.2 ATHY2 ADK1 PIP5K9 OMR1 PAL4 SPD1 ABCI6 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 PGK1 AT3G12930 AT3G13040 ATSERAT2;2 AT3G13120 ATKRS-2 PUT4 AT3G14067 FLU ESM1 ATPME3 HEME1 PRPS20 ATHM4 ADS3 MFP1 NDF4 JAL35 ECT6 MAT4 ATCRSH NMT1 AT3G19480 BCAT4 CBB1 GluTRBP ADOF2 AT3G22520 ELIP APS1 AT3G23700 ATSAHH2 GAE6 HCF101 ATGHBDH AT3G25570 LTA2 ATPRX AT3G26450 GAMMA-TIP2 ATSKL1 ATCM1 ATGSTU27 ATNIT1 AT3G45900 PTAC16 DUT1 PEX11B CAB4 AT3G47650 AT3G48200 AT3G48420 AHAS GSA2 ATBCAT-3 OEC33 AT3G51140 ATSSL4 ATG4 AT3G52500 FTSZ2-2 CYP97C1 ATPAL2 AtPIP2;1 PYRR HCEF1 ATPTR1 AT3G54400 ATGR2 PPL1 ATTSC13 OVA1 P5CS2 ATDFD SBPASE AT3G56010 AT3G56680 ACSF AT3G57020 AT3G57030 IPMI1 AT3G59040 PIF5 GUN4 AT3G59780 MTHFR1 AT3G60750 AT3G61080 ARATH;BSAS3;1 AT3G61870 CYP20-3 APG3 ATIPT3 CSP41A AtcpRRF EMB3126 ATCCD1 ANTR2 AT4G00895 TROL AT4G01310 ABC1 HEMG1 AtSAM2 AT-RSH1 AT4G02530 EOL1 PSAD-1 PETC EMB2369 APR ATPC1 ARGAH2 APX4 AT4G09630 ATPD AT4G10060 LHCB5 AT4G11570 CYP83A1 SHM4 CIPK4 ELIP2 ATCCT2 IAGLU AtCLA1 LIL3:1 CH-42 AK-HSDH AAH PyrD PRXR1 ATSMO1-2 PGR5-LIKE AT4G23670 AT4G24350 CER2 TAR2 ATRBP31 CHLM MSRA4 CGA1 AtFBA7 AtFBA5 ATK2 CIP7 AT4G28740 PSAE-1 AT4G29120 AHA2 GGP1 FAD6 ACDO1 PGR3 PDE334 ATSDX1 ATH1 AtGLDP1 ATHDA14 AtHMAC6 KUP5 AT4G33740 AT4G33760 CCoAOMT1 AT4G34090 SEP1 ERG9 ASE2 SLP2 MCA1 BGAL3 AT4G36390 AtPLT6 ACD2 CYP81F3 SHM1 AQI AtVAB2 ATMYB4 ROC1 ATPRP4 AtFBA2 AT4G39040 VHA-A3 ATSEC14 ATSK2 ATIPS1 AKN2 CYP79B2 DHS1 AT5G01020 AT5G01090 SQD2 ATPDX1 AIRP2 AtNCS1 SBE2.2 ATPAL3 ATLDA SIR NOL ATNAS1 UGT76C2 2-Cys AT5G08050 ATAIH AT5G08430 PDE340 AT5G08650 AtPPa6 PMDH2 AST68 ASN3 PAS2 ATNADP-ME2 TUB6 DiT1 AT5G12970 ATCYP20-2 AT5G13140 ABAR SIG4 AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 AT5G14500 AO AT5G14910 AT5G14970 GASA4 AT5G15950 VAT1 EMB2247 ENH1 PSY MEX1 ATCIMS PCB2 NSH3 BUD2 ADG2 AT5G19940 ATCPN21 AT5G21100 AT5G21105 ATCKX5 ATHMA8 AT5G22020 AT5G22340 IMS3 CaS HCF136 AT5G23820 SLAH3 PGL5 ATCYSD2 DES1 ARRPS1 AT5G34930 ATGSL1 AHK2 AT5G35970 atylmg3 AT5G36160 CAT3 ARLA1A AT5G41760 FTSH5 AOS AT5G43150 AT5G44020 ATGLK2 AT5G44520 ATFKBP13 CHL AtNUDT11 APE2 AT5G46580 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. FPS1 FRA1 AT5G48220 ADG1 HINT3 OVA2 ATGH9A1 ATPPOX AT5G50000 OLD5 AT5G51110 AT5G51140 At-NEET ATPGMP CRR1 AT5G52780 AT5G52960 AT5G52970 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 ATOMT1 THI1 ATMAP65-1 GATA21 AHA3 BIO1 ADCL APO2 NdhN EOL2 ATPDX2 CLB4 ATMYB34 PNM1 PDCB1 AtTudor2 AHA11 DXR ATNDPK2 PSAN DCT ATGCH ASN2 STR16 ATLFNR1 MSP-1 ATPA ATPF ATPH ATPI ATPE ATPB NDHB.1 NDHF NDHD NDHE NDHB.2 ATP6 NAD5
GO:0019752 carboxylic acid metabolic process	BP	4.028e-125	AT1G01080 PDH-E1 KCS1 ATGPAT4 AT1G01630 AT1G02150 AtSAM1 POR KCS2 AT1G04420 LIP2 AT1G05150 emb2394 UGT1 ATCTL1 BBX24 AT1G06550 HPD OE23 EMB2784 KCS3 ADT6 PSAO FATB ALB-1V ABC1 AVDE1 AT1G09310 CRB AtHIR1 ATBCAT-1 ACLA-1 ATFD1 CLPP6 ADT1 ATGLX1 AT1G11860 ATSRS ELP AT1G12800 AFB3 GAPA-2 AOC4 AT1G13650 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14270 SBH2 AT1G14345 PSS1 AT1G15410 AT1G15710 CP24 ADAP UP6 FUG1 ATSOT17 AT1G18660 LHCA2*1 KCS4 JMT ATLFNR2 CVP1 DRT112 AT1G21670 AT1G22170 AOAT1 AOR UGT74B1 ASB1 CER60 Cpn60beta4 AT1G29670 PDH-E1 PSAK IMPL1 AK-HSDH PSAF ATROPGEF14 AT1G31710 CYP97A3 ACBP PRK ACT1 PKp3 AT1G32470 PRPL11 AT1G33110 AT1G35420 ACC1 SHM7 expressed protein localized to the inner membrane of the chloroplast. GAPB ATSDC1 CP22 AT1G44920 ACD1 GATB AT1G49380 LACS2 GDC1 AT1G51110 PSAH-2 ATBG1 mMDH1 AtFAP3 ACP2 AtTLP18.3 ATLOX1 AT1G55260 AT1G55360 PSAG ATCSLE1 ATSERAT2;1 AT1G56190 ATNAS4 AT1G56500 ATATP-PRT1 AT1G60000 ABC4 ATB2 LHCA3 ACO2 FMO KAS AT1G62780 LACS3 BDG1 AT1G65230 FMO cICDH GAD2 ATGSR2 AT1G66430 DIN9 AT1G67280 ATLOX6 AT1G67700 ATKCR1 PSBY AT1G67950 ATHPR1 AT1G68260 CER6 PSRP3/1 PHYLLO AT1G70280 ATBCA4 AT1G70480 AOAT2 JAZ9 AT1G72500 AT1G72810 EDA17 LPA3 ENO1 AT1G74070 ATSOT18 ATSOT16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATKAS2 emb2184 UMAMIT5 PETE1 ACR3 AT1G77090 LACS9 AT1G78040 ATGSTU20 ATGA2OX1 ATGGH2 PSBR AtkdsA1 PGK ATNADP-ME4 RGA AT2G03420 LACS8 EMB2761 AT2G05920 ENR1 AtOPR3 ATHNIR KCS9 ADC1 HY3 AT2G19940 AAS ALF1 LIP1 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 PLAT2 AT2G22230 AAT SCPL8 AT2G23390 ATMES7 ACL ATMES3 YCF37 AT2G24020 AT2G24060 ALDH11A3 AT2G24580 AT2G25530 AT2G25830 OVA4 AtGLDP2 FDH ATDUF3 HO2 KCS11 AT2G26800 ATCDPMEK AT2G27680 ADT3 ADCS AT103-1A PY ANTR1 AtFAD3 ATFC-II CYP71A13 ATCOQ3 AT2G31670 AtCLO3 PRPL28 ATFAH1 EDA3 GDCH AT2G35410 SKL2 ATCSLA07 BLH1 GAMMA-TIP AT2G36950 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 CAC3 PIP2;6 NATA1 PnsL1 RCA CYT1 ATKT2 NTRC AT2G42130 AT2G42220 ATPPC2 AT2G42690 AT2G43030 ATLEUD1 BIO2 AT2G43560 FAB2 ACS1 MTHFR2 BGLU26 CHL-CPN10 AT2G44920 AT2G45180 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis ATPEX16 ATHH2 CYP86A8 AtSLD2 AtGH3.11 CER8 CAO PHR2 AT2G47780 CRR6 DEG2 AtCGS1 ATCYP38 ATBCA1 AK3 ATF1 ATGSTF11 PDE326 ATMS2 EMB3119 ATCYSD1 EMB3004 AT3G06980 AT3G07270 LHCB4.2 PTAC13 ADK1 PIP5K9 OMR1 PAL4 AHB2 ABCI6 AtFAD7 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 PGK1 AT3G12930 ATSERAT2;2 AT3G13120 ATKRS-2 FLU ESM1 ATPME3 HEME1 ATHM4 AT3G15520 ADS3 MFP1 NDF4 AT3G16370 JAL35 AAE7 LPD1 ECT6 MAT4 EMB1865 AT3G19480 BCAT4 CBB1 AT3G20390 ADOF2 AT3G22520 APS1 PKP-ALPHA AT3G23700 ATSAHH2 GAE6 HCF101 ATGHBDH AOC1 AOC2 AT3G25805 LTA2 ATPRX AT3G26450 GAMMA-TIP2 GAPA CCB1 ATSKL1 AT3G29185 ATCM1 AAO2 LTPG2 ATNIT1 RPL9 CAB4 AT3G47650 AHAS DCF GSA2 ATBCAT-3 AT3G51090 AT3G51140 LTP5 ATG4 PSRP2 CP33 AT3G52500 FTSZ2-2 CYP97C1 ATPAL2 AtPIP2;1 AT3G54210 AT3G54400 SETH3 PGPS2 OVA1 P5CS2 ATDFD SBPASE AT3G56010 ACSF IPMI1 PIF5 GUN4 AT3G59780 MTHFR1 AT3G60750 ATPIP1 ARATH;BSAS3;1 AtSLD1 AT3G61870 CYP20-3 AtFAP1 AtcpRRF APG1 EMB3126 AT3G63510 ATCCD1 ATT1 NAD-ME2 TROL AT4G01310 AT4G02530 EOL1 PSAD-1 EMB3129 PETC EMB2369 APR ATPC1 AtMYB74 ARGAH2 APX4 ATPD AT4G10300 LHCB5 AT4G10390 AT4G13050 CYP83A1 SHM4 ATSAHH1 ATECI3 CYP97B3 IAGLU AtCLA1 CLPR4 AT4G17560 LIL3:1 AT4G17650 AT4G18030 CH-42 AK-HSDH ATRAB8D ATFAH2 PRXR1 ATSMO1-2 PIP1;5 AT4G23670 CER2 PGI ATHB22 TAR2 AT4G24750 ATRBP31 ACP4 CHLM MSRA4 B1 AtFBA7 AtFBA5 VTC2 FAD4 ATK2 NARA5 AT4G28080 PSB28 PSAE-1 emb2726 PFK1 GGP1 FAD6 EMB2797 PGR3 PDE334 AtCESA1 AT4G32590 ATSDX1 ATH1 AtGLDP1 ATHDA14 KUP5 ATBCA5 AT4G33740 AT4G33760 ATOST1 CCoAOMT1 AT4G34090 SEP1 CLB6 MRL1 SLP2 HCF244 AFT MCA1 AT4G36390 AtPLT6 SHM1 AQI ROC1 ATPRP4 AtFBA2 AT4G39040 SHL1 ATSK2 ATIPS1 AKN2 CYP79B2 DHS1 AT5G01020 AT5G01090 SQD2 ATPDX1 AT-HSC70-1 SBE2.2 54CP FD-GOGAT ATPAL3 ATLDA KCS19 SIR ATNAS1 ATCESA3 AtFAD8 ATEGY2 2-Cys ATNUDX27 ERL2 FTRA2 AT5G08415 AT5G08430 AT5G08650 AtPPa6 PMDH2 AST68 ASN3 PAS2 AT5G10690 PPD5 ATNADP-ME2 TUB6 DiT1 AT5G12970 ATCYP20-2 AT5G13140 AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 EMB3137 AT5G14460 AT5G14500 ATDEF2 BETA AT5G14910 GASA4 BCCP2 AT5G16240 VAT1 BCCP EMB2247 PSY MEX1 ATCIMS AT5G18600 PCB2 AT5G19760 AT5G19940 ATMGD2 ATCPN21 AT5G22340 IMS3 CaS AT5G23820 ATCYSD2 DES1 GME ARRPS1 AT5G34930 CAC2 ATGSL1 AT5G36160 CAT3 UDG4 AT5G41760 AOS NDH18 KCS20 AT5G44020 AT5G44520 ATFKBP13 CHL AT5G45950 APE2 KAS1 AT5G46580 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. LIL3:2 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. FRA1 AT5G48220 ADG1 KAT5 OVA2 ATGH9A1 AT5G50000 AT5G51110 AT5G51140 ATPGMP CRR1 B2 AT5G52960 AT5G52970 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G53750 RPL24 VTC5 AT5G55220 ATMAP65-1 ATPEX5 BIO1 CER3 ADCL APO2 AT5G58330 EOL2 LecRK-I.9 CLB4 ATMYB34 COB PDCB1 AtTudor2 AT5G62210 AT5G62350 DXR ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. ALX8 PSAN DCT ASN2 STR16 ATLFNR1 AT5G66470 MSP-1 ABA1 EPS1 RPS14 ACCD NDHE
GO:0019637 organophosphate metabolic process	BP	1.414e-120	AT1G01080 AtFKGP ATGPAT4 GAE2 AT1G02150 POR ATHM1 AT1G04420 LIP2 emb2394 LPA19 5PTASE13 AtSLP1 ATF2KP ATNDI1 EMB2784 ATPCNA1 AT1G07440 AXS2 PSAO ALB-1V ABC1 AVDE1 CRB ATGSTU18 AT1G10900 ATFD1 CLPP6 AT1G12800 AT1G13650 AT1G13730 PnsL2 AT1G14270 AT1G14345 PSS1 NDF1 AT1G16080 UP6 FUG1 GLYR2 AT1G18060 AT1G18660 NDF6 LHCA2*1 ATLFNR2 CVP1 DRT112 ATNADK2 ATPIP5K1 AT1G22630 AT1G22850 AOR Cpn60beta4 AT1G29700 GlcNAc1pUT1 IMPL1 CYP97A3 ACBP PRK ATNSI ACT1 AT1G32470 GBSS1 PRPL11 AT1G36280 GAPB AtcFBP ATMCM2 AT1G44920 5PTASE11 ACD1 AtPMEAMT AT1G49380 FTSH1 GDC1 AT1G51110 ATMUM4 AtTLP18.3 ZKT PSAG AT1G55960 AT1G56500 ABC4 ATSCO1 AT1G62780 NRS/ER NDF2 AMT1;2 AT1G65230 cICDH AT1G66130 AT1G66330 AT1G67700 CER6 PSRP3/1 BIM2 FLN2 HEMB1 AOAT2 PGM2 CRR23 AT1G70770 AT1G70985 AT1G71710 ATPIN1 AT1G74070 ATKAS2 emb2184 LQY1 AtVAB1 AT1G76450 AtHMGR1 AT1G76570 AT1G77090 PIP5K2 AT1G78040 ATRHM1 NIP6 RPI2 AT2G03420 AT2G07689 AT2G15020 MCM4 ATHMA4 ALF1 LIP1 PSB29 PDTPI ATSULA BBX18 AtFBA1 AT2G21385 AT2G21960 ATIPS2 SCPL8 AT2G23390 NAPRT2 YCF37 AT2G24060 PRPL35 AFR HO2 ATCDPMEK AT2G27290 AT2G27680 PY ATFC-II FTSH2 BBX25 PRPL28 AT2G34460 EDA3 GDCH AT2G35390 AT2G35410 SKL2 ATE2FA AT2G36145 ATSIG6 AT2G37240 AT2G37660 PDX1L4 ATPDX1.1 ATMVD1 ATMTP11 SSL2 NTRC AGK1 AT2G42130 AT2G43030 AT2G43560 FAB2 ACS1 AT2G43760 5PTase12 AT2G44920 AT2G44970 AT2G45990 PSAP PHR2 DEG2 AT3G01060 AtSS2 ATCYP38 ATBCA1 ATRGP1 ATF1 ATGSTF11 PDE326 EMB3119 AT3G06980 PTAC13 PIP5K9 SPD1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 PGK1 AT3G12930 AT3G13120 FLU AT3G14205 ESM1 ATRHM3 ATHM4 AT3G15520 ADS3 MFP1 NDF4 ATCRSH NMT1 EMB1865 GLTP3 AT3G23700 GAE6 HCF101 ATGHBDH AAPT2 AT3G25660 AT3G25805 LTA2 CCB1 ATSKL1 ATTSO2 AT3G29185 RPL9 PTAC16 DUT1 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 ARLA1C OEC33 GMD2 ATG4 PSRP2 CP33 FTSZ2-2 CYP97C1 HCEF1 AT3G54210 AT3G54290 PLA PGPS2 PPL1 SBPASE AT3G56010 AT3G56290 ACSF AT3G59040 PIF5 GUN4 AT3G59780 CDS5 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 CSP41A AtcpRRF APG1 EMB3126 ATCCD1 ANTR2 AtGPAT8 AT4G00560 AT4G00895 TROL AT4G01310 ATGPAT3 AT-RSH1 AT4G02530 EMB3129 PETC ATPC1 AT4G05090 APX4 ATPD AT4G10300 CYP83A1 CYP97B3 ATCCT2 AtCLA1 CLPR4 AT4G17560 LIL3:1 AT4G17740 AT4G18030 CH-42 AK-HSDH PTAC14 AKT2 PGR5-LIKE PGI AT4G24750 ACP4 CHLM AT4G25280 AtFBA7 AtFBA5 AT4G26710 AT4G26860 FAD4 NARA5 AT4G28080 PSB28 AT4G28740 emb2726 AT4G29120 AHA2 GAE1 FAD6 AT4G31310 HCF153 PGR3 PDE334 ATSDX1 ATH1 AtGLDP1 FAB1A ATHDA14 AtHMAC6 AT4G34090 SEP1 CLB6 ASE2 MRL1 AT4G34920 HCF244 MCA1 AT4G36390 ACD2 SQE3 AtVAB2 AtFBA2 AT4G39040 VHA-A3 ATSEC14 ATIPS1 SQD2 AT5G01260 ATPDX1 SBE2.2 54CP ATLDA AT5G04980 AT5G05180 ATEGY2 2-Cys AT5G08050 PDE340 AT5G08650 PI-4KBETA2 PMDH2 PROPEP5 ATMIPS3 AT5G10690 PPD5 ATNADP-ME2 SIG4 EMB3137 AT5G14410 AT5G14460 ATDEF2 AO AT5G14910 AT5G15910 AT5G15950 ENH1 PSY AtUGP2 MEX1 AT5G17670 PCB2 ADG2 ATCPN21 ATHMA8 CaS HCF136 ATSIG5 PGL5 PYR6 GME ARRPS1 AT5G35170 ATGSL1 atylmg3 AT5G38520 UDG4 AT5G40500 GPDHp FTSH5 AOS ATIPK1 NDH18 AT5G44520 ATFKBP13 CHL AtNUDT11 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. FPS1 AMK2 ADG1 HINT3 AT5G50100 OLD5 AT5G50370 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 AHL RPL24 AT5G55220 PSD2 AHA3 NdhN FOLK ATUXS3 CLB4 PNM1 AtTudor2 AHA11 DXR ATNDPK2 AT5G63700 PSAN ATLFNR1 AT5G66470 ABA1 ATPA ATPF ATPH ATPI ATPE ATPB NDHB.1 NDHF NDHD NDHE NDHB.2 ATP6 NAD5
GO:0006091 generation of precursor metabolites and ...	BP	2.298e-119	PDH-E1 AtSAM1 LPA1 PSAD-2 FZL PSB27 POR ATHM1 AT1G05140 emb2394 LPA19 ATCTL1 BBX24 OE23 PSAO CRB ATFD1 CLPP6 ATGLX1 ATSRS GAPA-2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 AT1G14270 AT1G14345 CP24 NDF1 HCF173 ACR11 NDF6 LHCA2*1 ATLFNR2 AT1G22170 AT1G26220 AT1G29700 AB180 AB165 AB140 PRK PKp3 AT1G32470 RPL21C PMI1 GAPB CP22 Lhca5 ACD1 FTSH1 AT1G52220 PSAH-2 mMDH1 AT1G54500 AtTLP18.3 NDF5 PSAG AT1G56190 AT1G56500 CCB4 ABC4 ATB2 ATFD2 LHCA3 ACO2 ATSCO1 AT1G64355 NDF2 cICDH ATGSR2 AT1G66430 AT1G67700 PSBY ATHPR1 PHYLLO CRR23 LPA3 ENO1 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NDH-O ATKAS2 emb2184 LQY1 PETE1 AMY2 AT1G76570 AT1G78040 PSBR PGK APG2 RGA CRR3 PQL3 LHCB2 LHCB2 PGR5 AT2G07689 OTP51 PSAE-2 ATGLK1 PSB29 AtFBA1 SEP2 AT2G26500 ALB3 PBCP PSBW FTSH2 ARASP LHB1B2 EDA3 GDCH SKL2 GAMMA-TIP Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 PIP2;6 PnsL1 RCA LHCB4.3 AT2G42220 ATPPC2 AT2G43030 AT2G43560 AT2G43945 BGLU26 ATHH2 AT2G45990 PSAP AtTic20-II DEG2 RPH1 PnsL3 ATCYP38 ATBCA1 EMB3119 LHCB4.2 ABCI6 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 PGK1 HCF243 ADS3 PSAH-1 NDF4 HCF107 AtTic62 AT3G20390 PSBTN GluTRBP APS1 PKP-ALPHA AT3G23700 PLSP1 AtCHUP1 GAMMA-TIP2 GAPA CCB1 LHCB2 AtKIN14h PTAC16 CAB4 AT3G47650 AT3G48420 OEC33 PSRP2 AtPIP2;1 HCEF1 LHCA1 PPL1 SBPASE ACSF PrfB3 GUN4 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. CDS5 AT3G60750 ATPIP1 ARATH;BSAS3;1 LHCA2 AT3G61870 CYP20-3 CSP41A TROL AT4G02530 PSAD-1 PETC ATPC1 AT4G08280 APX4 ATPD LHCB5 PSAL ATSAHH1 PPD1 AT4G16980 LIL3:1 DEG5 PSBQ PGR5-LIKE PIP1;5 PGI ACP4 AT4G25830 AtFBA7 AtFBA5 PSB28 PSAE-1 PFK1 FAD6 PDE334 AtCESA1 AtHMAC6 SEP1 HCF244 AFT SHM1 AtFBA2 SHL1 SAMC1 LHCB4.1 STN8 OHP AT-HSC70-1 AT5G03880 FD-GOGAT SIR ATCESA3 2-Cys AT5G08050 FTRA2 AtPPa6 PMDH2 TUB6 EMB3136 ABAR EMB3137 BETA ENH1 ADG2 ATOEP80 AT5G19760 AT5G19940 ATCPN21 CRR42 ATHMA8 CaS HCF136 ATSIG5 AT5G27560 ARRPS1 AT5G35170 AMOS1 ATGSL1 ATPRFB AT5G38520 CRR7 DEG8 FTSH5 ATGLK2 AT5G44520 CHL APE2 Encodes the mitochondrial ATP synthase subunit delta. LIL3:2 AMK2 AT5G48790 ATGH9A1 OLD5 AT5G50370 AT5G51110 LPA2 CRR1 CCB2 AT5G52780 AT5G52960 GLT1 LHCB3 LUT2 NPL1 NdhN AT5G58330 AT5G59250 CLB4 COB AT5G62350 PSAN ATLFNR1 MSP-1 PSBA MATK RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 RPS14 PSAB PSAA YCF3 RPS4 NDHJ PSBG NDHC ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBF PSBE ORF31 PETG PSAJ RPS18 RPL20 CLPP1 PSBB PSBT PSBN PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 NDHB.1 NDHF YCF5 NDHD NDHE NDHG NDHI NDHA NDHH RPS15 NDHB.2 RPL2.2 NAD9 ATP6 NAD5 COX3
GO:0044238 primary metabolic process	BP	2.038e-118	LHY AT1G01080 PDH-E1 KCS1 AtFKGP encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT1G01300 AT1G01320 ASG4 AT1G01540 ATGPAT4 PIP1;3 AT1G01630 GAE2 AT1G02110 AT1G02150 AtSAM1 ATCSLD5 AtD27 NET1D PSAD-2 FZL AtBE2 AT1G03590 PSB27 POR ATHM1 AT1G04040 KCS2 IAA3 AXR3 AT1G04420 AT1G04430 PDLP2 LIP2 AT1G04680 AT1G04800 TOR2 ATGTF2H2 AT1G05140 AT1G05150 AT1G05170 emb2394 LPA19 UGT1 5PTASE13 BT3 ATCTL1 AT1G05870 BBX24 ATMYB13 RHON1 FTSH8 ATGSL07 AT1G06550 HPD encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase OE23 AT1G06730 ATF2KP AT1G07280 EMB2784 SR45a ATPCNA1 AtRLP1 ATRAB-A2B AT1G07440 ftsh10 KCS3 ATMPK13 GATA11 AXS2 ADT6 AT1G08280 PSAO FATB ALB-1V ABC1 AVDE1 ATSYP111 AT1G08800 AtMYB60 AT1G09310 CRB AT1G09440 AT1G09750 iPGAM1 AtHIR1 LRR ATBCAT-1 AT1G10120 ATGSTU18 ACLA-1 AT1G10740 AT1G10850 AT1G10900 EMB3103 ATFD1 AT1G11050 SCM AT1G11340 CBRLK1 AT1G11410 ATPMEPCRA ATSS3 CLPP6 ADT1 AT1G11820 ATGLX1 AT1G11860 ATSRS AT1G12080 ELP ATNRT1 ATBETAFRUCT4 AT1G12244 PHR1 AT1G12460 AT1G12500 ATRBL6 AT1G12800 AFB3 ICE2 GAPA-2 ORP1D GATL3 AT1G13650 AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 AT1G14200 AT1G14270 PKS2 SBH2 AT1G14345 AtMYB124 AT1G14460 AT1G14600 ADL1C scpl50 RHA2A PSS1 AT1G15165 AT1G15410 AT1G15530 CYCA2;3 AT1G15710 CP24 FDM1 AT1G15920 NDF1 ADAP AT1G16080 ATMYB58 AT1G16680 HCF173 UP6 FUG1 GLYR2 ATEGY3 AT1G18060 ATMPK8 AT1G18170 BEE1 AT1G18440 AT1G18460 AT1G18485 ATSOT17 AT1G18660 AtMYB47 NDF6 LHCA2*1 BES1 KCS4 AT1G19490 ATDHAR1 AT1G19600 ATCLH1 BEL10 AT1G19710 ARF5 TUB5 ATLFNR2 ARAC4 CVP1 DRT112 ASG5 AT1G20810 XCP2 AT1G21060 AT1G21590 ATNADK2 LYM1 ATPIP5K1 AT1G22170 AGL87 AT1G22630 FB AT1G22910 AT1G23030 AOAT1 ATCAF2 AOR MLP423 UGT74B1 ARL1 AT1G24330 ASB1 BBX15 CER60 AtPERK10 AT1G26190 Cpn60beta4 BGLU40 AT1G26790 AtHB23 AT1G27120 SPL11 AT1G27480 ATPUB45 AT1G28390 SRD2 AT1G28600 AT1G28610 AT1G28660 ARAB-1 AT1G29070 AT1G29660 AT1G29670 AT1G29720 RKF1 AT1G29950 PDH-E1 ARF6 PSAK AT1G30600 AT1G30690 GlcNAc1pUT1 IMPL1 AK-HSDH PSAF FEI1 ATROPGEF14 AT1G31710 CYP97A3 ACBP AT1G31920 PRK ATNSI AT1G32160 ACT1 KAN2 PKp3 AT1G32470 GBSS1 PRPL11 AT1G33110 AT-GTL1 AT1G33470 AT1G33600 AT1G33700 AT1G33811 ATSERK2 EMB3003 EMB2756 AT1G35340 AT1G35420 AT1G35560 RPL21C ACC1 AT1G36280 SHM7 ATNR2 PMI1 expressed protein localized to the inner membrane of the chloroplast. GAPB AtcFBP ATSDC1 CYCA1;1 CP22 ATMCM2 AT1G44920 AtBGAL5 BGLU1 ATTLL1 ABF2 Lhca5 5PTASE11 DYW1 AT1G48100 DGAT3 EMB3105 ACD1 RKL1 GATB AtPMEAMT AT1G49010 ACT8 AT1G49380 LACS2 AT1G49580 ATPREP2 AtCXE5 AT1G49740 PUB26 FTSH1 AT1G50270 AT1G50380 SCL-3 POLGAMMA2 GDC1 AT1G51080 AT1G51110 Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols. 4CL.1 ADOF1 AT1G51805 AT1G52220 PSAH-2 ATBG1 ATFPG-1 AT1G52510 AT1G52540 SPA4 FTM6 TCP3 mMDH1 AT1G53290 AT1G53430 ATMUM4 ATMPK18 AtFAP3 ATMSRB1 AT1G53900 AT1G54050 AT1G54290 ABCD2 AT1G54500 ACP2 ATATG18H AtTLP18.3 AT1G54790 AT1G54820 ANP2 ATLOX1 AtIDD7 AT1G55260 AT1G55360 NDF5 ZKT CPN60B PSAG AT1G55690 UKL3 ATCSLE1 ATSERAT2;1 HAC04 AT1G56190 AT1G56210 ATDI19 AT1G56500 AT1G57770 ATATP-PRT1 AT1G58170 SQE1 RXW8 CRR28 ARF1 AT1G59860 AT1G59970 AT1G60000 BGLU5 BGLU6 AT1G60590 ABC4 ATB2 AtNIK3 ATRECQ4B AT1G61190 AT1G61300 LHCA3 AT1G61610 AT1G61660 AT1G61740 AT1G62170 ACO2 FMO KAS AT1G62660 ATSCO1 AT1G62780 NRS/ER NRPD1 AT1G63640 AT1G64370 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AtGH9C2 LACS3 AT1G64500 AT1G64510 BDG1 AT1G64680 TUA1 NDF2 RPOD1 AT1G65070 AT1G65190 AT1G65220 AT1G65230 AtRLP10 ATHEX1 FMO cICDH GAD2 AT1G66080 ZFP4 TMK1 ATGSR2 AtMYB20 RGL AT1G66430 DIN9 AT1G67280 ATLOX6 EMB2814 AT1G67700 ATKCR1 PSBY ATFXG1 CSK AT1G67870 AT1G67950 ATHPR1 AtIDD14 AT1G68260 AT1G68400 CER6 PSRP3/1 AT1G68600 AT1G68660 AT1G68810 PHYLLO AT1G68940 BIM2 FLN2 AGO7 AtTCP15 HEMB1 CMT3 AT1G70000 SNL4 EMB25 AT1G70200 ATCYCD1;1 AXY4 AT1G70280 PG2 AT1G70550 AOAT2 MMZ2 PGM2 CRR23 AT1G70770 AT1G71070 AT1G71710 AT1G71810 AT1G72230 AT1G72270 PSY1R AT1G72500 AT1G72810 EDA17 LPA3 AT1G73110 AT1G73170 AT1G73390 AT1G73450 AT1G73460 ATPIN1 AT1G73600 AT1G73650 AT1G73655 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. ATMPK15 AtEIL3 AT1G73740 BBX16 SPPA ENO1 AT1G74070 ATSOT18 ATSOT16 ATHSP101 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. QKY AT1G74840 NDH-O ATKAS2 RPS9 emb2184 UMAMIT5 AtGH9B7 LQY1 ATCLV1 AtVAB1 PETE1 AT1G76110 AT1G76120 AMY2 sks5 CYCB2;4 AT1G76350 AT1G76450 AtHMGR1 AT1G76880 ACR3 AT1G77090 AT1G77310 LACS9 LAX3 PIP5K2 AT1G78010 AT1G78040 AT1G78060 RAP2.4 ATTPPB ATGSTU20 ATGA2OX1 ATSHB ATRHM1 ATTPS1 emb1473 ATGGH2 ATLUP1 AT1G78995 PSBR ECT8 APL AtkdsA1 PGK EMB1047 AT1G79630 AT1G79640 RFO1 AT1G79720 ATNADP-ME4 CS17 AT1G80030 AT1G80640 AT1G80850 AT1G80870 APG2 AT2G01210 MEE65 RPI2 RGA ARR14 AT2G01820 AHK4 BRL2 AtIDD5 STI AT2G02780 AT2G03140 AT2G03390 AT2G03420 AT2G03750 AT2G03980 RNE LACS8 AT2G04378 AT2G04700 FLA7 EMB2761 AT2G05790 AT2G05920 ENR1 AtOPR3 EXGT-A1 AT2G07170 AT2G07689 AT2G13440 AtXYP2 MCM9 AKN1 AGP9 ARFB1A ATHNIR OTP51 KCS9 MCM4 ADC1 AT2G16750 AT2G17972 ATBZIP2 AT2G18630 SCY1 HY3 ATHMA4 SLP3 AT2G19940 ATCLASP ALE2 AAS AT2G20550 ATGLK1 ALF1 AT2G20725 LIP1 AtERF53 PSB29 PDTPI ATSULA BBX18 AtFBA1 XK-1 AT2G21380 AT2G21385 AT2G21560 ATRL2 AT2G21860 AT2G21960 CSI1 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT2G22230 ATIPS2 AAT AT2G22360 AGL22 IAA8 SCPL11 SCPL8 scpl10 AT2G23070 DEAR3 AT2G23360 AT2G23390 NAPRT2 ATMES3 YCF37 AT2G23690 BLH4 AT2G23950 AT2G24060 PRPL35 PDE319 AT2G24170 AT2G24230 ALDH11A3 AT2G24280 ATRPA2 AT2G24580 AtDBP1 AT2G25800 ESE2 AT2G25830 OVA4 AtGLDP2 AT2G26100 ATHSFA2 CYP711A1 FDH ER AT2G26500 HO2 KCS11 AT2G26730 AT2G26800 ATCDPMEK AGO4 AT2G27060 LHW AT2G27290 AT2G27420 AT2G27680 ADT3 CH-CPN60A ATFUC1 AT2G28200 DRB2 BGAL8 RAP2.7 AT2G28590 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 ALB3 ADCS ATRBL1 AT2G29180 TUB7 PY ATVLN1 AtFAD3 PBCP AT2G30320 ATFC-II ATC4H PSBW ATCOQ3 FTSH2 ASKdZeta AT2G31040 TCP10 ATERF15 BBX25 ATNTH1 AT2G31670 ATGSL03 BAM6 ARASP MAPKKK17 AT2G32640 ATCB5-B ATCOP1 AtGH9B8 ATSUVH2 AtCLO3 PRPL28 AT2G33550 GALS1 ATUBC24 EMB3113 AtCCP1 AT2G34590 ABR ATHB-14 ATFAH1 EDA3 AT2G35050 AT2G35260 GDCH AT2G35390 AT2G35410 SKL2 FEI2 AT2G35640 ATERF38 scpl26 AT2G35840 AT2G35880 BLH1 NHL12 ATE2FA AT2G36145 AT2G36200 AT2G36350 DML1 AT2G36570 AT2G36630 GAMMA-TIP MAT3 AT2G36950 ATSIG6 ATPAL1 AT2G37050 UMAMIT13 AGD7 AS1 AT2G37660 CAC3 AtAUX1 PSRP4 ATSCAR2 RDO2 GAUT7 ATMVD1 NATA1 PnsL1 Encodes a Cysteine-rich peptide (CRP) family protein CYT1 AT2G39850 ATISA1 LHCB4.3 AT2G40260 ATKT2 ETG1 CYP98A3 AT2G41050 AT2G41130 ATCBK3 ARR8 NTRC AT2G41820 AGK1 AT2G41890 AT2G42130 AtSPL9 AT2G42220 ATBZIP34 AT2G42510 ATPPC2 AT2G42690 AT2G42750 ATMPK20 AT2G43030 ATLEUD1 BIO2 AT2G43500 Encodes a defensin-like (DEFL) family protein. AT2G43560 AT2G43590 FAB2 ACS1 AT2G43760 5PTase12 MTHFR2 AT2G44230 BGLU26 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT2G44970 AT2G45180 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis AT2G45340 BEN1 ATPEX16 AT2G45870 ASK20 ATHH2 CYP86A8 AtSLD2 AT2G46250 SPA1 ARF11 AT2G46810 PSAP PIL1 PTI1-4 SPL1 AtGolS1 ATDUF5 CER8 AT2G47440 CAO ATMYB12 PHR2 AT2G47780 CRR6 DEG2 AtCGS1 AtSS2 ATCFM2 PnsL3 ATHB-1 ATCYP38 AT3G01490 ATBCA1 AT3G01810 AK3 ATKT4 scpl25 ATRGP1 GAUT9 RAD23-3 MEE31 ATF1 AT3G02750 AT3G02820 PNT1 ATGSTF11 AtUGP1 PDE326 AT3G03770 ATMS2 emb2458 SDG31 IAA16 EMB3119 PDE181 ATWNK1 ATCYSD1 AT3G05180 ATN AT3G05350 AIF1 ATSK12 AT3G05900 AT3G06180 AT3G06410 ACLB-1 GATA15 AT3G06980 AT3G07270 AT3G07320 ATCSLC06 ATPUB9 SCPL27 AT3G08600 AT3G08660 AT3G08680 ATPK1 LHCB4.2 AT3G09050 PTAC13 Fes1A AT3G09440 AT3G09540 ATPAH1 AT3G09580 CRM3 AT3G09730 ADK1 PIP5K9 OMR1 AT3G10060 AtLCY GYRB1 PAL4 SPD1 AHB2 ABCI6 AT3G10720 AT3G10840 LSF2 AtFAD7 AT3G11210 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 ATHST AT3G12050 emb2738 ACT11 FAD2 AT3G12210 ATTBP2 ATHSP70 AGC1.5 PGK1 AT3G12930 AT3G13000 AT3G13040 ATSERAT2;2 AT3G13120 AT3G13180 AT3G13226 Cpn60beta2 ATKRS-2 AT3G13510 PUT4 CYP90D1 AT3G13740 BGAL1 AT3G14067 FLU AT3G14200 AT3G14205 ESM1 AT3G14220 AT3G14240 ATPME3 AT3G14330 SRF7 ATGSL04 ATMPK19 ATRHM3 AT3G14890 HEME1 IDM1 MEE35 PRPS20 SPL5 ATMT3 SPA3 ATHM4 AT3G15520 AT3G15550 AT3G15570 ADS3 MFP1 PSAH-1 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. EMB2083 ABCG29 AT3G16350 AT3G16370 JAL35 ATKINESIN-13A ATEBP AT3G16850 AAE7 HCF107 ECT6 POK1 MAT4 ATCRSH CIPK1 HYH ATACP5 RLK902 NMT1 WOX1 NRPD2B EMB1270 EMB1865 AT3G18500 ATPUB29 ATWNK6 ACT2 AT3G18870 AtTic62 AT3G19000 ATPREP1 AT3G19370 PUB25 AT3G19480 IKU2 BCAT4 CBB1 AT3G19850 AT3G20015 AT3G20230 AT3G20390 POLGAMMA1 AT3G20680 PSBTN AtBBX32 4CL5 4CL2 GLTP3 ADOF2 CYCP2;1 AT3G22150 ATWNK2 AT3G22520 ATTSO1 APS1 PKP-ALPHA ATSR2 ATCFM3A AT3G23090 bHLH34 AT3G23310 AT3G23510 AT3G23530 HGL1 AT3G23700 ATSAHH2 GAE6 ATTOPII AT3G23930 AT3G24190 HCF101 AT-HSFC1 PLSP1 AT3G24715 ICK3 GAUT8 ATFKBP62 AFH1 ATGHBDH AtNIK2 AAPT2 AT3G25660 AtCHUP1 AT3G25700 AOC1 AT3G25805 LTA2 RPL15 ATPRX AT3G26450 GAMMA-TIP2 ORF02 GAPA ATSNM1 AT3G26700 CCB1 ATICE1 ATSKL1 DRB3 ATTSO2 GHS1 LHCB2 RPL12 RPL12-C AT3G28040 AT3G28200 AT3G28220 AT3G28460 ABCB19 AT3G29185 ATCM1 AT3G42660 CHR38 AAO2 LTPG2 ATJ AT3G44620 RPL9 scpl48 JK224 ATMYB48 AT3G46370 PTAC16 DUT1 AT3G47070 ATPLC8 PEX11B ATSMC2 CAB4 AT3G47580 PYE AT3G47650 PUB39 AT3G47830 ATATM AT3G48200 CEP3 AT3G48420 AT3G48460 AHAS GSA2 AT3G49000 AT3G49340 BAM2 ATBCAT-3 AT3G49810 ARLA1C AT3G49880 OBP1 CRK ICK2 AT3G50685 BEH1 OEC33 AtHB28 SRS1 GATA6 AT3G51090 AT3G51140 GMD2 AT3G51280 ATSSL4 AT3G51510 LTP5 ATWNK5 IMK2 ATG4 AT3G51950 PSRP2 CP33 AT3G52500 FTSZ2-2 BGAL2 KIPK ELL1 AT3G52960 AT3G53100 CYP97C1 ATPAL2 AT3G53380 AtPIP2;1 AT3G53680 PYRR HCEF1 AT3G54210 AT3G54290 AT3G54390 AT3G54400 SETH3 LHCA1 PMR6 PLA PGPS2 GSTL2 PDE329 PPL1 ATTSC13 OVA1 P5CS2 ATDFD SBPASE ESK1 AT3G56010 UGP3 IMK3 AT3G56290 AT3G56370 AT3G56760 AT3G56870 PSRP5 ACSF AT3G57060 AT3G57070 BPG2 PrfB3 AT3G57220 AGL16 AT3G57400 ATVLN3 AT3G57800 AT3G57830 SPL15 GIS ATWRKY69 GAUT15 IPMI1 AT3G59040 PIF5 GUN4 ACR4 AT3G59780 MTHFR1 AT3G60320 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. HAT3 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. CDS5 AT3G60750 MAP65-4 GAUT1 HD-GL2-1 ATPIP1 ARATH;BSAS3;1 AT3G61490 AtSLD1 ATX3 AT3G61820 AT3G61870 CYP20-3 AT3G62110 CP12 AT3G62570 ATMYB11 BGLU8 APG3 ATIPT3 CYCP1;1 CSP41A OEP6 AtFAP1 AtcpRRF PLA ATMRK1 AT3G63340 OTP86 APG1 EMB3126 AT3G63510 ATCCD1 BB BRCA2(IV) UNE10 AT4G00165 YAB3 EDA8 RLK4 ATT1 ANTR2 FDM2 AtGPAT8 AT4G00560 ASKTHETA AHDP QUA3 AT4G00870 AT4G00895 MEE47 CRK41 TROL GT72B1 MGP4 AT4G01310 AT4G01460 AtSAM2 ATGPAT3 MCM7 AT-RSH1 AT4G02410 ATXT2 AT4G02530 AT4G02630 EOL1 PSAD-1 EMB3129 AtRBP-DR1 AFB1 XTH9 AT4G03260 PETC AT4G04340 EMB2369 APR ATPC1 CPK27 ATKEA3 PDF2 AT4G05090 AtMYB74 PSBQ ATK5 Encodes a putative glycosyl hydrolase family 10 protein (xylanase). ORL1 ARGAH2 APX4 AT4G09040 CRRJ A/N-InvI AT4G09630 ATPD AT4G10060 ATSPS4F ATDET1 AT4G10300 LHCB5 AT4G10390 AT4G11100 SPA2 AT4G11175 AT4G11320 ATMPK5 Hop3 SKU5 FLA2 PSAL AT4G12830 scpl20 EPFL9 AT4G13050 SDG22 AT4G13540 AT4G13550 CYP83A1 SHM4 ATSAHH1 KINESIN-12A PDE226 AT4G14330 AT4G14360 bHLH104 ATECI3 NF-YB3 CIPK4 APS3 ATTCX2 TUA6 CYP97B3 ATCCT2 AT-BETA-AMY AT4G15430 AT4G15545 IAGLU AtCLA1 AT4G16141 PHYD SPK1 ATOPT3 CLPR4 AtBAM3 AT4G17180 ATRAB1C AT4G17560 LIL3:1 AT4G17650 AT4G17740 ATTPS5 AT4G17810 MYC4 APRR2 AT4G18030 PHYE ATSS4 DEG5 TCP2 CH-42 ATWL4 AT4G18740 AT4G18810 AT4G18820 AT4G18970 CMT2 AT4G19460 Encodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death. AK-HSDH ATPP2-A1 AAH PTAC14 BAM3 ATRAB8D AT4G20760 ATFAH2 GHR1 AT4G21060 ATRP1 PSBQ B120 ATM4 AT4G21650 ATML1 BGLU47 AT4G21770 PRXR1 sks4 AT4G22290 CYP706A2 AT4G22730 ATSMO1-2 PGR5-LIKE CRK21 CRK22 PIP1;5 AT4G23670 AT4G23740 CRF2 AT4G23820 CRR31 ATCSLG3 ATCSLG1 cpHsc70-1 AT4G24350 CER2 AGL24 PGI ATHB22 AT4G24750 AT4G24760 ATRBP31 AT4G24790 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) ACP4 CHLM MSRA4 OTP70 AT4G25280 AT4G25290 B1 CGA1 AtFBA7 AtFBA5 AT4G26540 AT4G26555 AGC1-2 AtWRKY20 AT4G26650 GDPDL3 AT4G26710 MAP65-2 AT4G26790 VTC2 AT4G26940 FAD4 AT4G27130 ATK2 AT4G27240 AT4G27300 CIP7 AT4G27435 AT4G27560 NARA5 BGLU9 AT4G28080 AT4G28180 AT4G28360 AT4G28480 PSB28 AT4G28706 AT4G28740 PSAE-1 AT4G28780 emb2726 IAA27 AT4G29100 AT4G29120 ATHXK1 PFK1 AT4G29920 AT4G30020 AT4G30180 AHA2 VEL1 GAE1 SARK GGP1 BRS1 scpl29 ASHR3 AtLAP2 FAD6 ATCIPK6 AT4G31530 HCF153 EMB2797 PGR3 AT4G32000 PDE334 AT4G32330 AtCESA1 LUG AT4G32590 ATSDX1 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHB-8 ATH1 AtGLDP1 AT4G33080 AT4G33110 FAB1A AT4G33440 ATHDA14 AT4G33500 AtHMAC6 KUP5 AT4G33740 AT4G33760 ATOST1 CCoAOMT1 AT4G34090 SEP1 AT4G34220 CLB6 ATCAP1 BLH6 SSR16 ERG9 SQS2 ATVHA-C1 AT4G34730 ASE2 MRL1 AT4G34920 SLP2 AtMYB32 CAT2 HCF244 AT4G35270 AT4G35335 XCP1 AFT MCA1 AT4G36180 GATA7 BGAL3 AT4G36390 AT4G36530 BEE2 ATRL3 AtPLT6 AtGGPPS11 BLH2 ACD2 ANT SQE3 XTH7 SHM1 pde191 AQI ATROPGEF1 AtVAB2 AT4G38520 ATMYB4 AT4G38690 ROC1 ATPRP4 AtFBA2 AT4G39040 VHA-A3 SHL1 AT4G39150 ATSEC14 APL3 ATCESA2 SAMC1 ATSK2 AT4G39630 FKBP16-2 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. ATIPS1 AKN2 CYP79B2 AT4G39960 DHS1 AT5G01020 AT5G01075 AT5G01090 SQD2 AT5G01260 ATPDX1 LHCB4.1 AT5G01590 AT5G01890 STN8 AT5G02160 Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ATMTRNASEII ABCI20 AT5G02370 MT2B PLL2 AT5G02460 AT-HSC70-1 AT5G02710 AT5G02940 iqd2 AT5G03140 ATRAB AtNCS1 SBE2.2 AT5G03870 AT5G03880 54CP GYRB2 FD-GOGAT ATPAL3 ATLDA BTR1 KCS19 SIR ACR12 ATOFP13 NOL AT5G04980 RUL1 ATCESA3 AT5G05180 AtFAD8 ATEGY2 AT5G05790 UGT76C2 2-Cys TBR HAT14 AT5G07020 AT5G07030 ERL2 ATMSRA2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ATMYB29 AT5G08050 TCP17 BIM1 scpl35 AT5G08390 FTRA2 AT5G08415 AT5G08430 PDE340 AT5G08650 AAP2 AtSRT2 PI-4KBETA2 AtPPa6 PMDH2 ATBX3 CESA5 AT5G10020 ATMIPS3 AST68 ASN3 PAS2 AIL6 AT5G10605 AT5G10690 AT5G10770 CIPK5 AT5G10960 AT5G10970 ATSPS2F HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 TINY2 ATNADP-ME2 AT5G12110 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 DiT1 AT5G12970 ATGSL12 ATCYP20-2 AT5G13140 CRN AT5G13410 IQD11 EMB3136 ATPDAT SVR3 SIG4 CCS52B ATCHS AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 AT5G14210 EMB3137 AT5G14410 AT5G14460 AT5G14500 ATSK13 ATDEF2 AO AT5G14910 AT5G14970 AT5G15070 GASA4 AtENODL17 AT5G15390 APG6 GAUT14 BCCP2 LNG1 AtbZIP3 AtNIK1 AT5G16240 VAT1 BCCP LRR1 AtMYB43 DHAR3 EMB2247 AT5G16720 AT5G16810 ENH1 PSY MEX1 AT5G17660 AT5G17670 EMB1241 PSRP6 ATCIMS AT5G18140 anac088 ATSRA1 AT5G18500 AT5G18550 ATOBGC PCB2 BAM9 EMB3013 NSH3 ADG2 AT5G19290 AT5G19760 AtRbcX2 AT5G19940 AT5G20050 AtHBP5 ATMGD2 AT5G20700 ATCPN21 AT5G20885 CRR42 AT5G21100 AT5G21105 AT5G21222 CIPK26 ATHMA8 UBP8 anac089 AT5G22340 AT5G22850 IMS3 CaS HCF136 AT5G23170 SCPL34 AT5G23280 HMGB6 AT5G23480 AT5G23820 TUB8 AT5G24010 ATSIG5 SQE5 AT5G24155 ATSS1 AT5G24320 PGL5 LSU2 CRY3 AT5G25590 BGLU37 AT5G26330 PYR6 AT5G27560 ATCYSD2 DES1 ATNEK3 AT5G28300 AT5G28500 GME ARRPS1 AT5G34930 AT5G35170 AMOS1 CAC2 ATGSL1 AHK2 atylmg3 AT5G36160 ATPRFB AT5G36230 CAT3 AT5G37010 ARF8 ARLA1A AT5G37790 AT5G38510 AT5G38520 CRR7 UDG4 AHP3 ORTH1 DEG8 AT5G40140 CRK42 RS5 AT5G40450 AT5G40500 RPL27 DRB5 ATUBC8 AT5G41760 AT5G42070 ATBG_PPAP FTSH5 AT5G42620 AOS AT5G42720 SPL2 TZP NDH18 KCS20 AT5G44020 ATGLK2 TUB4 AT5G44520 AT5G44530 MCM6 AT5G45280 AT5G45290 BAM8 AT5G45650 AT5G45670 ATFKBP13 AT5G45720 CIPK20 CHL AtNUDT11 AT5G45950 APE2 AtLARP6a KAS1 AT5G46390 AT5G46420 BSK2 AT5G46580 bHLH071 TET1 PYL1 ATNIG1 AT5G46910 Encodes the mitochondrial ATP synthase subunit delta. LON2 LIL3:2 AT5G47190 AT5G47390 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT5G47620 NF-YB2 FPS1 GAUT4 FRA1 AMK2 AT5G48220 AACT2 ADG1 AT5G48360 HINT3 ATFKBP65 AT5G48590 ATCAP-C AT5G48790 KAT5 LPA66 HCT OVA2 DDM2 AT5G49215 ATMYB111 ACLB-2 XIP1 ATGH9A1 cpHsc70-2 AT5G50000 AT5G50110 AT5G50180 OLD5 AT5G50370 CAA33 AT5G51110 AT5G51140 ATTPPA LPA2 AT5G51560 At-NEET ATPGMP AT5G52010 CRR1 AT5G52190 SCL8 B2 ATHS83 AT5G52660 AT5G52780 ATWRKY27 AT5G52960 AT5G52970 AT5G53140 FTSH11 AT5G53340 ORG1 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 AtPSKR2 ATOMT1 PTAC15 AHL CRLK1 RPL24 THI1 VTC5 AT5G55180 AT5G55220 ATMAP65-1 AtIAMT1 GDPDL4 ATKCO1 CRR21 AT5G55950 AtHsp90-3 AtHsp90.2 AT5G56040 ATPEX5 AT5G56590 ILL1 AT5G56790 AT5G56840 AT5G56850 GATA21 AT5G56890 NAP1;3 LUT2 CIA2 PSD2 AHA3 BIO1 AT5G57610 CER3 ADCL APO2 NPL1 AT5G58150 NdhN AT5G58330 AT5G58520 AT5G58540 EOL2 FOLK ATPLC5 DDB2 AtcPT4 ftsh9 AT5G58950 AT5G59130 ATUXS3 AT5G59610 AtVIP2 AT5G60270 LecRK-I.9 ARF4 CLB4 ATMYB34 COB PNM1 PDCB1 PIF7 AT5G61350 EMB2728 AtMYB28 AT5G61570 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AtTudor2 ARF1-BP ATGT18 AT5G62350 CDF1 AHA11 AT5G62710 DXR AT5G62840 AT5G62930 BT1 ATNDPK2 AT5G63410 SNRK2-5 AT5G63700 AT5G63710 SHA1 AtBGAL10 AT5G63940 ALX8 PSAN DCT JK218 EMB3144 CESA6 ASN2 ATPUB38 AT5G65220 ATHB-5 KAC2 BAM1 XTH6 CGR3 STR16 ATLFNR1 AT5G66470 AT5G66520 AT5G66530 MSP-1 ENY AT5G66770 ABA1 ICU2 TOE3 AT5G67200 IRX15-L ATEB1C RLK ARA12 PSBA MATK RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 RPS14 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBF PSBE ORF31 PETG PSAJ RPS18 RPL20 CLPP1 PSBB PSBT PSBN PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 RPL2.1 RPL23 NDHB.1 RPS7 NDHF YCF5 NDHD NDHE NDHG NDHI NDHA RPS15 RPS7.2 NDHB.2 RPL23.2 RPL2.2 RPL16 ATP6 NAD5
GO:0019684 photosynthesis, light reaction	BP	1.822e-115	LPA1 PSAD-2 FZL PSB27 POR ATHM1 AT1G05140 emb2394 LPA19 OE23 PSAO CRB CLPP6 ATSRS GAPA-2 PnsL2 AT1G14270 AT1G14345 CP24 NDF1 HCF173 ACR11 NDF6 LHCA2*1 ATLFNR2 AT1G26220 AT1G29700 AB180 AB165 AB140 PRK AT1G32470 RPL21C PMI1 GAPB CP22 Lhca5 FTSH1 AT1G52220 PSAH-2 AT1G54500 AtTLP18.3 NDF5 PSAG AT1G56500 CCB4 ABC4 ATFD2 LHCA3 ATSCO1 AT1G64355 NDF2 AT1G67700 PSBY ATHPR1 PHYLLO CRR23 LPA3 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NDH-O ATKAS2 emb2184 LQY1 PETE1 AT1G76570 PSBR APG2 CRR3 PQL3 LHCB2 LHCB2 PGR5 OTP51 PSAE-2 ATGLK1 PSB29 AtFBA1 SEP2 AT2G26500 ALB3 PBCP PSBW FTSH2 ARASP LHB1B2 EDA3 GDCH SKL2 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 PIP2;6 PnsL1 RCA LHCB4.3 AT2G42220 AT2G43030 AT2G43560 AT2G43945 BGLU26 AT2G45990 PSAP AtTic20-II DEG2 RPH1 PnsL3 ATCYP38 ATBCA1 EMB3119 LHCB4.2 ABCI6 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 PGK1 HCF243 ADS3 PSAH-1 NDF4 HCF107 AtTic62 PSBTN GluTRBP AT3G23700 PLSP1 AtCHUP1 GAPA CCB1 LHCB2 PTAC16 CAB4 AT3G47650 AT3G48420 OEC33 PSRP2 HCEF1 LHCA1 PPL1 SBPASE ACSF PrfB3 GUN4 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. CDS5 LHCA2 AT3G61870 CYP20-3 CSP41A TROL AT4G02530 PSAD-1 PETC ATPC1 AT4G08280 APX4 ATPD LHCB5 PSAL PPD1 AT4G16980 LIL3:1 DEG5 PSBQ PGR5-LIKE ACP4 PSB28 PSAE-1 FAD6 PDE334 AtHMAC6 SEP1 HCF244 SHM1 AtFBA2 SAMC1 LHCB4.1 STN8 OHP AT5G03880 FD-GOGAT 2-Cys AT5G08050 FTRA2 AtPPa6 PMDH2 EMB3136 ABAR EMB3137 BETA ENH1 ADG2 ATOEP80 AT5G19940 CRR42 ATHMA8 CaS HCF136 ATSIG5 AT5G27560 ARRPS1 AMOS1 ATPRFB AT5G38520 CRR7 DEG8 FTSH5 ATGLK2 CHL APE2 LIL3:2 AT5G48790 AT5G51110 LPA2 CRR1 CCB2 AT5G52780 AT5G52960 LHCB3 LUT2 NPL1 NdhN AT5G58330 AT5G59250 CLB4 PSAN ATLFNR1 MSP-1 PSBA MATK PSBK PSBI ATPA ATPF ATPH PSBD PSBC YCF9 PSAB PSAA YCF3 NDHJ PSBG NDHC ATPE ACCD PSAI YCF4 YCF10 PETA PSBL PSBF PSBE ORF31 PETG PSAJ RPS18 PSBB PSBT PSBN PSBH PETB PETD RPL16 YCF5 NDHD NDHE NDHG NDHI NDHA NDHH
GO:1901135 carbohydrate derivative metabolic proces...	BP	2.471e-115	AT1G01080 AtFKGP GAE2 AT1G02150 AtSAM1 AtBE2 POR ATHM1 AT1G04420 LIP2 AT1G05170 emb2394 LPA19 ATCTL1 ATF2KP EMB2784 AT1G07440 AXS2 AT1G08280 PSAO ALB-1V ABC1 AVDE1 CRB ATGSTU18 ATFD1 CLPP6 ATNRT1 AT1G12800 AT1G13650 PnsL2 AT1G14270 AT1G14345 PSS1 NDF1 AT1G16080 CYP79F2 BUS1 AtHBP1 FUG1 GLYR2 AT1G18060 ATSOT17 AT1G18660 NDF6 LHCA2*1 AT1G19710 ATLFNR2 CVP1 DRT112 AT1G21440 AT1G22630 AOR UGT74B1 Cpn60beta4 AT1G27120 GlcNAc1pUT1 AK-HSDH FEI1 CYP97A3 PRK ATNSI ACT1 AT1G32470 GBSS1 PRPL11 AT1G33700 AT1G36280 GAPB AtcFBP AT1G44920 ACD1 AT1G49380 FTSH1 GDC1 AT1G51110 AT1G51340 AT1G53290 ATMUM4 ESP ABCD2 ATATG18H AtTLP18.3 AT1G56500 ABC4 FMO ATSCO1 AT1G62780 NRS/ER NDF2 AT1G65230 FMO AT1G67700 ATFXG1 CER6 PSRP3/1 BIM2 FLN2 HEMB1 NRT1.7 PGM2 CRR23 AT1G70770 AT1G73170 AT1G74070 ATSOT18 ATSOT16 ATKAS2 emb2184 LQY1 AtVAB1 AT1G76450 AtHMGR1 AT1G77090 AT1G78040 ATRHM1 AtkdsA1 RPI2 AT2G03420 AT2G07689 AKN1 ATHMA4 ALF1 LIP1 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21960 SCPL8 AT2G23390 YCF37 AT2G24060 PRPL35 AT2G24280 AT2G26100 HO2 ATCDPMEK AT2G27680 ATFUC1 PY ATFC-II FTSH2 AT2G31670 AT2G31790 PRPL28 EDA3 AT2G35050 AT2G35260 GDCH AT2G35390 AT2G35410 SKL2 AT2G36145 MAT3 ATSIG6 UMAMIT12 AT2G37660 ATISA1 NTRC AT2G42130 ATPPC2 AT2G42690 AT2G43030 ATLEUD1 AT2G43560 FAB2 ACS1 ATHOL1 BGLU26 AT2G44920 AT2G44970 PSAP PHR2 DEG2 AtSS2 ATCYP38 ATBCA1 ATKT4 ATRGP1 AT3G02250 ATF1 ATGSTF11 PDE326 EMB3119 Encodes a defensin-like (DEFL) family protein. AT3G06980 PTAC13 ADK1 ABCI6 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 PGK1 AT3G12930 ATSERAT2;2 AT3G13120 FLU ESM1 ATRHM3 ATHM4 AT3G15520 ADS3 MFP1 NDF4 MAT4 ATCRSH ATACP5 EMB1865 BCAT4 AT3G20390 APS1 AT3G23700 GAE6 HCF101 PLSP1 ATGHBDH AT3G25805 LTA2 ATPRX CCB1 ATSKL1 ATMDAR4 UMAMIT47 AT3G29185 RPL9 AT3G45160 PTAC16 DUT1 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 AT3G50685 OEC33 GMD2 ATG4 PSRP2 CP33 FTSZ2-2 CYP97C1 PYRR HCEF1 AT3G54210 ATGRXCP PLA PPL1 SBPASE AT3G56010 UGP3 ACSF ATVLN3 IPMI1 AT3G59040 PIF5 GUN4 AT3G59780 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 CSP41A AtcpRRF APG1 EMB3126 ATCCD1 ANTR2 AT4G00560 AT4G00895 TROL AT4G01310 AtSAM2 AT-RSH1 ATXT2 AT4G02530 EMB3129 PETC APR ATPC1 APX4 ATPD AT4G10060 ATSPS4F AT4G10300 BASS5 CYP83A1 AT4G13840 CYP97B3 AtCLA1 CLPR4 AT4G17560 LIL3:1 AT4G17650 AT4G18030 ATSS4 CH-42 AT4G19460 AT4G21060 ATRP1 PRXR1 PGR5-LIKE AT4G24350 PGI AT4G24750 AT4G24930 ACP4 CHLM AtFBA7 AtFBA5 AT4G26940 AtENODL2 NARA5 AT4G28080 PSB28 AT4G28740 emb2726 AT4G29120 AT4G30020 AHA2 GAE1 GGP1 FAD6 EMB2797 PGR3 PDE334 ATH1 AtGLDP1 ATHDA14 AtHMAC6 AT4G34090 SEP1 CLB6 MRL1 SLP2 HCF244 AtGGPPS11 ACD2 CYP81F3 XTH7 AtVAB2 AtFBA2 AT4G39040 VHA-A3 ATCESA2 ATIPS1 AKN2 CYP79B2 AT4G39970 SQD2 ATPDX1 SBE2.2 54CP ATLDA SIR ATEGY2 UGT76C2 2-Cys ATMYB29 AT5G08050 PDE340 AT5G08650 AtPPa6 PMDH2 AST68 AT5G10690 ATSPS2F PPD5 ATNADP-ME2 SIG4 ATIMD1 EMB3137 AT5G14460 ATDEF2 AT5G14910 ENH1 PSY MEX1 AT5G17670 PCB2 NSH3 ADG2 AT5G19940 ATMGD2 ATCPN21 ATHMA8 IMS3 CaS HCF136 ATSS1 PGL5 BGLU37 AtTGG1 GME ARRPS1 ATGSL1 atylmg3 AT5G38520 UDG4 DEG8 GPDHp FTSH5 AOS NDH18 AT5G44020 AT5G44520 ATFKBP13 CHL AtNUDT11 PYL1 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. ADG1 HINT3 ATPPOX AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 FTSH11 AT5G53340 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 RPL24 AT5G55220 AHA3 APO2 NPL1 NdhN AT5G58330 ATUXS3 CLB4 ATMYB34 PNM1 AtMYB28 AtTudor2 AHA11 DXR ATNDPK2 PSAN ATLFNR1 AT5G66470 ATPA ATPF ATPH ATPI ATPE ATPB NDHB.1 NDHF NDHD NDHE NDHB.2 ATP6 NAD5
GO:0006793 phosphorus metabolic process	BP	2.801e-115	AT1G01080 AtFKGP AT1G01540 ATGPAT4 PIP1;3 GAE2 AT1G02150 PSAD-2 FZL PSB27 POR ATHM1 AT1G04420 LIP2 TOR2 emb2394 LPA19 5PTASE13 OE23 AtSLP1 ATF2KP ATNDI1 EMB2784 ATPCNA1 AT1G07440 ATMPK13 AXS2 PSAO ALB-1V ABC1 AVDE1 ATSYP111 CRB AT1G09440 AtHIR1 LRR ATGSTU18 ACLA-1 AT1G10850 AT1G10900 ATFD1 AT1G11050 SCM AT1G11340 CBRLK1 AT1G11410 CLPP6 ATSRS AT1G12080 AT1G12460 AT1G12800 GAPA-2 AT1G13650 AT1G13730 PnsL2 AT1G14270 PKS2 AT1G14345 PSS1 AT1G15530 CYCA2;3 CP24 NDF1 AT1G16080 HCF173 UP6 FUG1 GLYR2 AT1G18060 ATMPK8 AT1G18660 NDF6 LHCA2*1 ATCLH1 ATLFNR2 CVP1 DRT112 ASG5 AT1G21590 ATNADK2 ATPIP5K1 AT1G22630 AT1G22850 AOR AtPERK10 AT1G26190 Cpn60beta4 AT1G28390 AT1G29700 AT1G29720 RKF1 PDH-E1 GlcNAc1pUT1 IMPL1 FEI1 CYP97A3 ACBP PRK ATNSI AT1G32160 ACT1 AT1G32470 GBSS1 PRPL11 AT1G33600 ATSERK2 EMB3003 RPL21C AT1G36280 PMI1 GAPB AtcFBP CYCA1;1 ATMCM2 AT1G44920 AtBGAL5 5PTASE11 ACD1 RKL1 AtPMEAMT AT1G49380 AT1G49580 FTSH1 GDC1 AT1G51110 AT1G51805 AT1G52220 PSAH-2 AT1G52540 SPA4 TCP3 AT1G53430 ATMUM4 ATMPK18 AtTLP18.3 AT1G54820 ANP2 ZKT PSAG AT1G55960 AT1G56500 ABC4 AtNIK3 ACLA-2 AT1G61610 KAS ATSCO1 AT1G62780 NRS/ER AT1G63640 NDF2 AMT1;2 AT1G65190 AT1G65230 cICDH AT1G66130 TMK1 AT1G66330 AT1G67700 PSBY CSK ATHPR1 AT1G68400 CER6 PSRP3/1 BIM2 FLN2 AtTCP15 HEMB1 CMT3 ATCYCD1;1 AOAT2 PGM2 CRR23 AT1G70770 AT1G70985 AT1G71710 AT1G71810 PSY1R AT1G73450 AT1G73460 ATPIN1 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. ATMPK15 AtEIL3 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. IQD31 NDH-O ATKAS2 emb2184 AtGH9B7 LQY1 ATCLV1 AtVAB1 PETE1 AT1G76110 CYCB2;4 AT1G76450 AtHMGR1 AT1G76570 AT1G77090 LAX3 PIP5K2 AT1G78040 ATRHM1 AT1G79640 RFO1 AT1G80640 NIP6 AT1G80870 APG2 AT2G01210 RPI2 AT2G01820 AHK4 BRL2 AT2G02780 AT2G03420 AT2G03750 FLA7 ENR1 AT2G07689 AtXYP2 AKN1 AGP9 AT2G15020 MCM4 AT2G16750 AtPPa2 HY3 ATHMA4 ALE2 ATGLK1 ALF1 LIP1 PSB29 PDTPI ATSULA BBX18 AtFBA1 AT2G21385 AT2G21960 ATIPS2 AGL22 SCPL8 AT2G23070 AT2G23390 NAPRT2 YCF37 AT2G23950 AT2G24060 PRPL35 AT2G24230 AFR AtDBP1 AT2G25870 ER HO2 KCS11 AT2G26730 ATCDPMEK AGO4 AT2G27060 AT2G27290 AT2G27680 AT2G28590 ALB3 PY ANTR1 ATVLN1 PBCP ATFC-II CYP71A13 FTSH2 ASKdZeta TCP10 BBX25 MAPKKK17 AtPFA-DSP2 PRPL28 AT2G34460 AT2G34590 ABR EDA3 AT2G35050 AT2G35260 GDCH AT2G35390 AT2G35410 SKL2 FEI2 ATCSLA07 ATE2FA AT2G36145 AT2G36350 AT2G36570 ATSIG6 AT2G37050 AT2G37240 AT2G37660 PDX1L4 ATPDX1.1 ATMVD1 ATMTP11 RCA ATCBK3 SSL2 NTRC AT2G41820 AGK1 AT2G41890 AT2G42130 ATMPK20 AT2G43030 BIO2 AT2G43560 FAB2 ACS1 AT2G43760 5PTase12 BGLU26 AT2G44920 AT2G44970 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis AT2G45340 AT2G45990 SPA1 PSAP PTI1-4 CAO PHR2 DEG2 AT3G01060 AtSS2 ATCYP38 AT3G01490 ATBCA1 ATRGP1 ATF1 ATGSTF11 NPC3 PDE326 AT3G03770 EMB3119 ATWNK1 ATN AIF1 ATSK12 ACLB-1 AT3G06980 ATPUB9 AT3G08680 ATPK1 LHCB4.2 PTAC13 PIP5K9 SPD1 ABCI6 LSF2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 AGC1.5 PGK1 AT3G12930 AT3G13120 FLU AT3G14205 ESM1 SRF7 ATMPK19 ATRHM3 SPA3 ATHM4 AT3G15520 ADS3 MFP1 NDF4 AT3G16850 LPD1 HCF107 ATCRSH CIPK1 RLK902 NMT1 EMB1865 ATWNK6 IKU2 CBB1 AT3G19850 PSBTN GLTP3 CYCP2;1 ATWNK2 ATSR2 AT3G23310 AT3G23700 GAE6 ATTOPII AT3G24190 HCF101 PLSP1 AT3G24715 ICK3 ATGHBDH AtNIK2 AAPT2 AT3G25660 AtCHUP1 AT3G25805 LTA2 AT3G26700 CCB1 ATSKL1 ATTSO2 AT3G28040 AT3G29185 AT3G44620 RPL9 JK224 AT3G46370 PTAC16 DUT1 PEX11B AT3G47580 AT3G47650 AT3G48200 AT3G48420 GSA2 BAM2 ARLA1C CRK ICK2 AT3G50685 OEC33 GMD2 ATSSL4 ATWNK5 IMK2 ATG4 PSRP2 CP33 FTSZ2-2 ELL1 CYP97C1 AT3G53380 AtPPa4 HCEF1 AT3G54210 AT3G54290 PLA PGPS2 PPL1 SBPASE AT3G56010 IMK3 AT3G56290 AT3G56370 AT3G56760 ACSF AT3G57830 AT3G59040 PIF5 GUN4 ACR4 AT3G59780 AT3G60320 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. CDS5 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 CYCP1;1 CSP41A AtcpRRF ATMRK1 AT3G63340 APG1 EMB3126 ATCCD1 RLK4 ANTR2 AtGPAT8 AT4G00560 ASKTHETA AT4G00895 CRK41 TROL AT4G01310 ATGPAT3 AT-RSH1 AT4G02410 AT4G02530 AT4G02630 PSAD-1 EMB3129 AT4G03260 PETC ATPC1 CPK27 ATKEA3 AT4G05090 ATK5 APX4 ATPD AT4G10300 AT4G10390 SPA2 ATMPK5 FLA2 CYP83A1 PDE226 CIPK4 CYP97B3 ATCCT2 AT4G15545 AtCLA1 PHYD SPK1 CLPR4 AT4G17560 LIL3:1 AT4G17740 AT4G18030 PHYE CH-42 ATWL4 Encodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death. AK-HSDH PTAC14 BAM3 GHR1 PSBQ B120 AKT2 AT4G22730 ATSMO1-2 PGR5-LIKE CRK21 CRK22 AT4G23740 CRR31 PGI AT4G24750 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) ACP4 CHLM AT4G25280 AtFBA7 AtFBA5 AT4G26540 AGC1-2 AT4G26710 MAP65-2 AT4G26860 FAD4 AT4G27300 NARA5 AT4G28080 PSB28 AT4G28740 emb2726 AT4G29120 AHA2 GAE1 SARK FAD6 ATCIPK6 AT4G31310 HCF153 PGR3 AT4G32000 PDE334 ATSDX1 ATH1 AtGLDP1 AT4G33080 FAB1A ATHDA14 AT4G33500 AtHMAC6 ATOST1 AT4G34090 SEP1 AT4G34220 CLB6 ERG9 ASE2 MRL1 AT4G34920 HCF244 MCA1 AT4G36180 AT4G36390 ACD2 SQE3 AtVAB2 AT4G38520 ROC1 AtFBA2 AT4G39040 VHA-A3 ATSEC14 SAMC1 ATIPS1 AKN2 AT5G01020 SQD2 AT5G01260 ATPDX1 AT5G01890 STN8 AT5G03140 SBE2.2 AT5G03880 54CP ATLDA AT5G04980 RUL1 AT5G05180 ATEGY2 2-Cys ERL2 AT5G08050 PDE340 AT5G08650 PI-4KBETA2 AtPPa6 PMDH2 PROPEP5 AT5G10020 ATMIPS3 PAS2 AT5G10690 CIPK5 PPD5 ATNADP-ME2 TUB6 CRN EMB3136 SIG4 AT5G14210 EMB3137 AT5G14410 AT5G14460 ATSK13 ATDEF2 BETA AO AT5G14910 AtENODL17 AT5G15910 AT5G15950 AtNIK1 BCCP LRR1 AT5G16810 ENH1 PSY AtUGP2 MEX1 AT5G17670 ATSRA1 AT5G18500 PCB2 EMB3013 ADG2 AT5G19940 AT5G20050 ATCPN21 AT5G21222 CIPK26 ATHMA8 CaS HCF136 AT5G23170 AT5G24010 ATSIG5 PGL5 PYR6 ATNEK3 GME ARRPS1 AT5G35170 CAC2 ATGSL1 AHK2 atylmg3 ATPRFB AT5G37010 AT5G37790 AT5G38520 UDG4 CRK42 AT5G40500 GPDHp FTSH5 AOS ATIPK1 NDH18 ATGLK2 AT5G44520 ATFKBP13 CIPK20 CHL AtNUDT11 APE2 BSK2 PYL1 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. FPS1 AMK2 AACT2 ADG1 HINT3 AT5G48790 ACLB-2 XIP1 AT5G50000 AT5G50100 AT5G50180 OLD5 AT5G50370 AT5G51110 LPA2 AT5G51560 At-NEET ATPGMP AT5G52780 AT5G52970 AT5G53140 ORG1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 AtPSKR2 AHL CRLK1 RPL24 THI1 AT5G55220 AT5G56040 AT5G56790 AT5G56890 PSD2 AHA3 AT5G57610 APO2 NPL1 AT5G58150 NdhN AT5G58520 AT5G58540 FOLK AT5G58950 ATUXS3 AT5G60270 LecRK-I.9 CLB4 PNM1 AT5G61350 AT5G61570 AtTudor2 AHA11 AT5G62710 DXR ATNDPK2 AT5G63410 SNRK2-5 AT5G63700 AT5G63710 SHA1 AT5G63940 PSAN JK218 BAM1 ATLFNR1 AT5G66470 MSP-1 ABA1 AT5G67200 ATEB1C RLK ATPA ATPF ATPH ATPI ATPE ATPB NDHB.1 NDHF NDHD NDHE NDHB.2 ATP6 NAD5
GO:0009628 response to abiotic stimulus	BP	3.139e-115	LHY KCS1 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT1G01300 ASG4 ATGPAT4 PIP1;3 AT1G02110 CER1 AtSAM1 ATCSLD5 POR ATHM1 AT1G04040 ABCC5 KCS2 AT1G04430 AT1G04680 TOR2 ATGLR3.4 5PTASE13 BT3 ATCTL1 encodes a flavonol-7-O-rhamnosyltransferase involved in the formation of rhamnosylated flavonols BBX24 ATMYB13 AT1G06550 OE23 ATNDI1 SR45a AtRLP1 AT1G07400 ATRAB-A2B AT1G07440 KCS3 ATVAM2 ADT6 ABC1 AVDE1 AtMYB60 CRB iPGAM1 ATGSTU17 ACLA-1 ATFD1 CBRLK1 ADT1 ATGLX1 ELP ATNRT1 ATBETAFRUCT4 PHR1 AFB3 ICE2 CYP71B2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14200 AT1G14210 PKS2 SBH2 RHA2A AtAVP1 CP24 ATCCR1 ADAP ATOCT3 ACR11 ATRABA1B AT1G17200 ABCG11 ATEGY3 AtMYB47 LHCA2*1 KCS4 JMT AT1G19710 ATLFNR2 ARAC4 DRT112 AT1G20870 FB AOAT1 AOR ASB1 CER60 ABCB13 ABCB14 AT1G29660 AT1G29670 AB165 AT1G30440 UGT78D1 KUF1 FEI1 ACBP PRK AT1G32220 GBSS1 AT-GTL1 OHP2 RPL21C ACC1 ATNR2 GAPB CP22 ABF2 mtLPD1 ACD1 AT1G49010 ACT8 TUA2 AT1G50280 ATHX AT1G50380 ATHKL1 GDC1 AT1G51200 AT1G51400 ABCG12 4CL.1 ATBG1 TSA1 FRS6 SPA4 mMDH1 TTL1 AT1G54050 AT1G54410 ATATG18H AtTLP18.3 CPN60B ATSERAT2;1 ATDI19 AT1G56500 AtHEMA1 SQE1 AT1G59860 ATB2 ATRECQ4B ATFD2 DWA3 ATGPT2 ACO2 KAS AT1G62660 AT1G63010 AT1G64150 BDG1 RPOD1 4CL3 cICDH GAD2 AT1G66080 ATGSR2 RGL PMI2 DIN9 RBCS1A AT1G67280 CSK ATHPR1 CER6 AT-EXP1 SHW1 AT1G70000 SNL4 PG2 MMZ2 PGM2 AT1G70770 AtCPB AT1G72270 ATPIN1 AT1G73650 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. AtEIL3 BBX16 SPPA ATSOT16 ATHSP101 ATHVA22A QKY AT1G74840 ALDH10A8 ATKAS2 UMAMIT5 AtGH9B7 ATCDSP32 AT1G76450 AtHMGR1 AT1G76570 TAPX LAX3 PIP5K2 AT1G77800 RAP2.4 ATGSTU20 ATRHM1 ATGGH2 PSBR AT1G80030 RGA AHK4 LHCB2 PGR5 ENR1 AtOPR3 EXGT-A1 AGT KCS9 ADC1 ATGLR2 AHK1 ATSYP112 HY3 AT2G19310 ATCLASP AtERF53 ATCSP4 PDTPI AtFBA1 ATRL2 SEP2 AT2G22230 ATIPS2 AT2G22360 AGL22 AT2G23390 ATMES3 AFR AT2G25530 emb2410 ATHSFA2 FDH AR781 KCS11 ATCDPMEK ADT3 AT2G28200 RAP2.7 HIS4 ATEXP6 TUB7 ANTR1 AtFAD3 PBCP ATC4H FTSH2 BBX25 ATGLR3.7 ATCOP1 ATSUVH2 AtCLO3 EMB3113 ABR ATHB-14 GDCH FEI2 BLH1 GAMMA-TIP MAT3 ABCB1 ATSIG6 ATPAL1 PIP2;2 PIP2;3 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AS1 ATEXP3 AT2G37660 LCD1 AtAUX1 ATPDX1.1 cdf3 RDO2 ANNAT4 PIP2;6 RCA CYT1 AT2G39980 LHCB4.3 AT2G41040 ATCBK3 AT2G42690 ATPAO2 FAB2 BGLU26 AT2G44920 ATHH2 SPA1 AtGH3.11 ROPGAP3 PIL1 AtGolS1 CAO ATMYB12 AGP26 AtSS2 ATHB-1 ATCYP38 ATBCA1 ATRGP1 AT3G02250 MEE31 AT3G02910 AtUGP1 AT3G03770 ATMS2 IAA16 EMB3119 AT3G05640 FRS7 AT3G08620 AT3G08640 AT3G08660 ATPK1 LHCB4.2 Fes1A AT3G09440 AT3G10060 AtFAD7 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 AT3G12050 ATHSP70 DRT100 PGK1 AT3G13510 FLU ESM1 ATMT3 AT3G15570 ADS3 TPR4 AQP1 AT3G16350 AT3G16370 JAL35 ATEBP AT3G16850 MAT4 CIPK1 HYH mRNA level of the MEB5.2 gene (At3g17800) remains unchanged after cutting the inflorescence stem ACT2 ATCAD4 BCAT4 CBB1 AT3G19850 AT3G20390 AtBBX32 4CL2 UGT84A2 AT3G22104 ATWNK2 ATTSO1 ELIP APS1 ATSR2 bHLH34 AT3G23700 ATSAHH2 AT3G24190 ATFKBP62 AFH1 AOC1 AOC2 AT3G26450 AT3G26490 GAMMA-TIP2 GAPA ATICE1 LHCB2 ABCB15 ABCB19 ATGSTU27 ATJ AT3G44380 AT3G44450 AT3G44820 JK224 FLA4 AT3G46630 PTAC16 AT3G47070 CAB4 ATATM DIN11 BAM2 OEC33 AT3G50840 GATA6 F3'H ATGLR3.6 ATWNK5 AT3G52360 AT3G52740 ATPAL2 AtPIP2;1 HCEF1 SCR ATBTAF1 LHCA1 PMR6 A11 ATTSC13 P5CS2 SBPASE ESK1 ACSF AT3G57020 PIF5 ACR4 AT3G60290 AT3G60320 AT3G60750 SDR1 ATPIP1 ARATH;BSAS3;1 CYP20-3 CP12 CSP41A ATCCD1 BRCA2(IV) EDA8 PIP1;4 AHDP TROL GT72B1 AGY1 AtSAM2 ATXT2 AT4G02530 AT4G02940 AFB1 PETC CPK27 AtMYB74 APX4 ATPD ATSPS4F ATDET1 LHCB5 SPA2 Hop3 SKU5 FLA2 AtENODL19 CYP83A1 ATSAHH1 The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. ATECI3 ELIP2 TUA6 AT4G15430 UGT84A1 AT4G15545 AtCLA1 ATVAMP724 AtSWEET17 PHYD ATOPT3 AT4G16490 AT4G16980 AtBAM3 ATG2484-1 DELTA-TIP2 LIL3:1 AT4G17650 PHYE ATSS4 KAT2 ERD3 AT4G19460 Encodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death. ATPP2-A1 BAM3 PSBQ ATM4 PRXR1 sks4 PGR5-LIKE PIP1;5 AT4G23670 CRR31 cpHsc70-1 AGL24 TAR2 ATRBP31 ATHVA22D AT4G25030 ACP4 MSRA4 ABCB2 CGA1 AtFBA7 AT4G26710 VTC2 FAD4 CIP7 VEL1 AT4G30400 FAD6 ATCIPK6 ENP ATGPX7 PDE334 AtCESA1 ATSDX1 ATH1 AT4G33500 AT4G33560 ATOST1 SEP1 ALDH3 ATCAP1 AtMYB32 CAT2 PIP2;7 HCF244 ATGLR3.2 AFT MCA1 CYP84A1 GATA7 ALDH3F1 MEL1 SQE3 SHM1 ATROPGEF1 AtVAB2 ATMYB4 ROC1 AT4G38840 VHA-A3 SHL1 CYP79B2 AT4G39960 AT5G01090 ATPDX1 LHCB4.1 OHP ABCI20 MT2B AT-HSC70-1 AtNCS1 ATCSLA09 FD-GOGAT KCS19 SIR ATCESA3 AtCHIL AtFAD8 2-Cys FTIP1 ATMSRA2 ATMYB29 CYP75B1 AT5G08050 AT5G08430 ATFLS1 AT5G08650 NDC1 AAP2 AtPPa6 PMDH2 AT5G10010 PAS2 ATSPS2F HY5 OCP3 ATNADP-ME2 ATMSL10 TUB6 DiT1 AT5G13140 AtSWEET15 SIG4 ZIFL1 ATCHS ATIMD1 ATSK13 BETA APG6 LNG1 AtbZIP3 AT5G15950 AtNIK1 BCCP UGT78D2 ENH1 AtUGP2 MEX1 ATCIMS ATOBGC ADG2 AT5G19730 TUA3 HHP1 AT5G20700 ATCPN21 IMS3 CaS HCF136 EFO2 TUB8 ATSIG5 ATSS1 CRY3 DGR2 ATRD22 AMOS1 CAC2 ATGSL1 AHK2 PMI15 RBCS3B RBCS2B RBCS1B RS5 FTSH5 AOS KCS20 ABCI21 ATGLK2 APE2 KAS1 ATNIG1 Encodes the mitochondrial ATP synthase subunit delta. AT5G47390 FPS1 AT5G47800 ATRBOHD PAT1 ADG1 AT5G48500 AT5G48540 ATFKBP65 KAT5 HRB1 ATCP1 AAP6 ATGH9A1 cpHsc70-2 AT5G51140 EXL3 ATPGMP ATBAG1 EFO1 ATHS83 AT5G52660 FTSH11 GLT1 CRLK1 AT5G54660 THI1 VTC5 ATKCO1 AtHsp90-3 AtHsp90.2 GATA21 AT5G57710 APO2 NPL1 DDB2 GIL1 CLB4 COB PNM1 VIP4 PIF7 EMB2728 AtTudor2 AT5G62210 AT5G62350 TUB3 DXR ATNDPK2 SNRK2-5 AtBGAL10 AAP4 ALX8 JK218 CESA6 CLEL ASN2 BAM1 XTH6 ATLFNR1 AT5G66560 MSP-1 sks17 ABA1 TOE3 ATEB1C AT5G67385 ATPA ATPB
GO:0006081 cellular aldehyde metabolic process	BP	6.887e-115	AT1G01080 AT1G02150 CER1 POR ATHM1 AT1G04420 LIP2 emb2394 LPA19 EMB2784 AT1G07440 PSAO ALB-1V ABC1 AVDE1 CRB ATGSTU18 ATFD1 CLPP6 ATGLX1 AT1G12800 AT1G13650 PnsL2 AT1G14270 AT1G14345 NDF1 AT1G16080 FUG1 GLYR2 AT1G18060 AT1G18660 NDF6 LHCA2*1 ATLFNR2 CVP1 DRT112 AT1G21670 AT1G22630 AOR Cpn60beta4 IMPL1 CYP97A3 PRK ATNSI ACT1 AT1G32470 PRPL11 GAPB AT1G44920 ACD1 AT1G49380 FTSH1 GDC1 AT1G51110 AtTLP18.3 AT1G56500 ABC4 ATSCO1 AT1G62780 NDF2 AT1G65230 AT1G67280 AT1G67700 CER6 PSRP3/1 HEMB1 ATBCA4 CRR23 AT1G70770 AT1G74070 ATKAS2 emb2184 LQY1 AT1G76450 ACR3 AT1G77090 AT1G78040 RPI2 AT2G03420 ALF1 LIP1 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21960 SCPL8 AT2G23390 YCF37 AT2G24020 AT2G24060 PRPL35 AT2G25530 HO2 ATCDPMEK AT2G27680 PY ATFC-II ATCOQ3 FTSH2 PRPL28 EDA3 GDCH AT2G35410 SKL2 AT2G36145 ATSIG6 AT2G37660 PDX1L4 ATPDX1.1 NTRC AT2G42130 AT2G43030 AT2G43560 FAB2 ACS1 AT2G44920 PSAP PHR2 DEG2 ATCYP38 ATBCA1 ATF1 ATGSTF11 PDE326 EMB3119 AT3G06980 PTAC13 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 PGK1 AT3G12930 AT3G13120 FLU ESM1 ATHM4 AT3G15520 ADS3 MFP1 NDF4 AAE7 EMB1865 AT3G23700 HCF101 ATGHBDH AT3G25805 LTA2 CCB1 ATSKL1 AT3G29185 RPL9 PTAC16 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 PSRP2 CP33 FTSZ2-2 CYP97C1 HCEF1 AT3G54210 SETH3 PGPS2 PPL1 SBPASE AT3G56010 ACSF AT3G59040 PIF5 GUN4 AT3G59780 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 CSP41A AtcpRRF APG1 EMB3126 AT3G63510 ATCCD1 ANTR2 TROL AT4G01310 AT4G02530 EMB3129 PETC ATPC1 APX4 ATPD AT4G10300 CYP83A1 CYP97B3 AtCLA1 CLPR4 AT4G17560 LIL3:1 AT4G17650 AT4G18030 CH-42 PGR5-LIKE PGI AT4G24750 ACP4 CHLM AtFBA7 AtFBA5 NARA5 AT4G28080 PSB28 AT4G28740 emb2726 AT4G29120 FAD6 PGR3 PDE334 ATH1 AtGLDP1 ATHDA14 ATBCA5 AT4G34090 SEP1 ALDH3 CLB6 MRL1 HCF244 ALDH3F1 ACD2 AtVAB2 AtFBA2 AT4G39040 SQD2 ATPDX1 SBE2.2 54CP ATLDA ATEGY2 2-Cys ATNUDX27 AT5G08050 AT5G08650 PMDH2 AT5G10690 PPD5 ATNADP-ME2 SIG4 EMB3137 AT5G14460 ATDEF2 BETA AT5G14910 ENH1 PSY MEX1 AT5G18600 PCB2 ADG2 ATCPN21 CaS HCF136 PGL5 ARRPS1 ATGSL1 atylmg3 FTSH5 AOS NDH18 AT5G44520 ATFKBP13 CHL Encodes the mitochondrial ATP synthase subunit delta. ADG1 ATPPOX AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 RPL24 AT5G55220 NdhN CLB4 AtTudor2 DXR ATNDPK2 PSAN ATLFNR1 AT5G66470 RPS14 NDHE
GO:0019682 glyceraldehyde-3-phosphate metabolic pro...	BP	7.790e-114	AT1G01080 AT1G02150 POR ATHM1 AT1G04420 LIP2 emb2394 LPA19 EMB2784 AT1G07440 PSAO ALB-1V ABC1 AVDE1 CRB ATGSTU18 ATFD1 CLPP6 AT1G12800 AT1G13650 PnsL2 AT1G14270 AT1G14345 NDF1 AT1G16080 FUG1 GLYR2 AT1G18060 AT1G18660 NDF6 LHCA2*1 ATLFNR2 CVP1 DRT112 AT1G22630 AOR Cpn60beta4 CYP97A3 PRK ATNSI ACT1 AT1G32470 PRPL11 GAPB AT1G44920 ACD1 AT1G49380 FTSH1 GDC1 AT1G51110 AtTLP18.3 AT1G56500 ABC4 ATSCO1 AT1G62780 NDF2 AT1G65230 AT1G67700 CER6 PSRP3/1 HEMB1 CRR23 AT1G70770 AT1G74070 ATKAS2 emb2184 LQY1 AT1G76450 AT1G77090 AT1G78040 RPI2 AT2G03420 ALF1 LIP1 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21960 SCPL8 AT2G23390 YCF37 AT2G24060 PRPL35 HO2 ATCDPMEK AT2G27680 PY ATFC-II FTSH2 PRPL28 EDA3 GDCH AT2G35410 SKL2 AT2G36145 ATSIG6 AT2G37660 NTRC AT2G42130 AT2G43030 AT2G43560 FAB2 ACS1 AT2G44920 PSAP PHR2 DEG2 ATCYP38 ATBCA1 ATF1 ATGSTF11 PDE326 EMB3119 AT3G06980 PTAC13 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 PGK1 AT3G12930 AT3G13120 FLU ESM1 ATHM4 AT3G15520 ADS3 MFP1 NDF4 EMB1865 AT3G23700 HCF101 ATGHBDH AT3G25805 LTA2 CCB1 ATSKL1 AT3G29185 RPL9 PTAC16 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 PSRP2 CP33 FTSZ2-2 CYP97C1 HCEF1 AT3G54210 PPL1 SBPASE AT3G56010 ACSF AT3G59040 PIF5 GUN4 AT3G59780 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 CSP41A AtcpRRF APG1 EMB3126 ATCCD1 ANTR2 TROL AT4G01310 AT4G02530 EMB3129 PETC ATPC1 APX4 ATPD AT4G10300 CYP83A1 CYP97B3 AtCLA1 CLPR4 AT4G17560 LIL3:1 AT4G18030 CH-42 PGR5-LIKE PGI AT4G24750 ACP4 CHLM AtFBA7 AtFBA5 NARA5 AT4G28080 PSB28 AT4G28740 emb2726 AT4G29120 FAD6 PGR3 PDE334 ATH1 AtGLDP1 ATHDA14 AT4G34090 SEP1 CLB6 MRL1 HCF244 ACD2 AtVAB2 AtFBA2 AT4G39040 SQD2 ATPDX1 SBE2.2 54CP ATLDA ATEGY2 2-Cys AT5G08050 AT5G08650 PMDH2 AT5G10690 PPD5 ATNADP-ME2 SIG4 EMB3137 AT5G14460 ATDEF2 AT5G14910 ENH1 PSY MEX1 PCB2 ADG2 ATCPN21 CaS HCF136 PGL5 ARRPS1 ATGSL1 atylmg3 FTSH5 AOS NDH18 AT5G44520 ATFKBP13 CHL Encodes the mitochondrial ATP synthase subunit delta. ADG1 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 RPL24 AT5G55220 NdhN CLB4 AtTudor2 DXR ATNDPK2 PSAN ATLFNR1 AT5G66470 NDHE
GO:0006790 sulfur compound metabolic process	BP	1.209e-110	PIP1;3 AT1G01630 AtSAM1 FZL AtBE2 POR LIP2 TOR2 AT1G05150 ATCTL1 OE23 EMB2784 PSAO AVDE1 ATSYP111 AT1G09310 AtHIR1 ATGSTU17 ACLA-1 ATGLX1 AT1G11860 ATSRS AT1G12080 ELP ATNRT1 AT1G12800 AFB3 CP24 CYP79F2 BUS1 AtHBP1 ATSOT17 LHCA2*1 APS2 ATLFNR2 CVP1 DRT112 AT1G21440 AOAT1 AOR UGT74B1 PDH-E1 PSAK IMPL1 AK-HSDH PSAF FEI1 ATROPGEF14 ACBP PRK AT1G32470 AT1G33110 EMB3003 AT1G35420 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 ATMCM2 AtBGAL5 ACD1 AT1G51340 PSAH-2 ESP ABCD2 AtTLP18.3 AT1G55260 AT1G55360 PSAG ATSERAT2;1 AT1G56190 ATATP-PRT1 SQE1 AT1G60000 ACLA-2 LHCA3 APR2 ACO2 FMO KAS AT1G65230 FMO AT1G66430 PSBY ATFXG1 AT1G67950 ATHPR1 AT1G68260 CER6 NRT1.7 AT1G70280 AT1G72500 AtEIL3 ATSOT18 ATSOT16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. IQD31 ATKAS2 AtGH9B7 PETE1 AtHMGR1 ACR3 AT1G77090 LAX3 AT1G78040 PSBR FLA7 AT2G05920 ENR1 AtXYP2 AKN1 AGP9 ATHNIR ALF1 LIP1 PDTPI AtFBA1 AT2G22230 SCPL8 ATMES3 ALDH11A3 AT2G24280 KCS11 AT2G26730 AT2G27680 PY ATFC-II CYP71A13 ATCOQ3 AT2G31670 AT2G31790 AT2G34590 AT2G35260 GDCH SKL2 BLH1 MAT3 UMAMIT12 ATMVD1 PnsL1 ATKT2 AT2G42220 AT2G42690 ATLEUD1 BIO2 FAB2 ACS1 ATHOL1 MTHFR2 BGLU26 CAO AtCGS1 ATKT4 AT3G02250 ATF1 ATGSTF11 ATMS2 APK3 EMB3119 ATCYSD1 Encodes a defensin-like (DEFL) family protein. ACLB-1 AT3G08680 LHCB4.2 ADK1 ABCI6 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 ATSERAT2;2 FLU ESM1 MFP1 NDF4 JAL35 LPD1 ECT6 MAT4 BCAT4 CBB1 AT3G20390 ADOF2 AT3G22520 APS1 ATSAHH2 PLSP1 ATGHBDH LTA2 ATPRX AT3G26450 GAMMA-TIP2 ATSKL1 ATMDAR4 UMAMIT47 ATGSTU27 AT3G45160 PTAC16 CAB4 GSA2 AT3G50685 OEC33 ATG4 FTSZ2-2 ELL1 AtPIP2;1 AT3G54400 ATGR2 ATGRXCP SBPASE AT3G56010 ACSF IPMI1 PIF5 GUN4 MTHFR1 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. AT3G60750 ARATH;BSAS3;1 CYP20-3 APG1 TROL AT4G01310 AtSAM2 ATXT2 EOL1 PSAD-1 APR ATPC1 AT4G05090 ATK5 APX4 ATPD LHCB5 BASS5 FLA2 CYP83A1 AT4G13840 SBP1 APS3 AtCLA1 SPK1 CH-42 ATRP1 PRXR1 APR3 ATSMO1-2 AT4G23670 CER2 AT4G24930 ATK2 AtENODL2 PSAE-1 AT4G30020 GGP1 FAD6 PDE334 ATH1 AtGLDP1 ATHDA14 KUP5 AT4G33740 CCoAOMT1 ERG9 SLP2 MCA1 AtGGPPS11 CYP81F3 XTH7 AQI ROC1 ATPRP4 AtFBA2 ATCESA2 ATIPS1 AKN2 CYP79B2 AT4G39970 AT5G01020 AT5G01090 SQD2 SBE2.2 ATLDA SIR 2-Cys ATMYB29 FTRA2 AT5G08415 AT5G08430 AtPPa6 PMDH2 AST68 PAS2 TUB6 ATCYP20-2 AT5G13140 AT5G13980 AT5G14120 ATIMD1 AT5G14500 GASA4 AtENODL17 BCCP LRR1 MEX1 ATCIMS PCB2 AT5G19940 ATCPN21 IMS3 CaS BGLU37 AtTGG1 ATCYSD2 DES1 CAC2 ATGSL1 AT5G38520 DEG8 AT5G41760 FTSH5 AOS AT5G44020 CHL AtNUDT11 APE2 TET1 PYL1 FPS1 FRA1 AACT2 ADG1 HINT3 ACLB-2 ATGH9A1 ATPPOX AT5G50000 OLD5 AT5G51140 ATPGMP FTSH11 AtPLR1 AHL THI1 ATMAP65-1 AT5G56040 AHA3 BIO1 APO2 NPL1 AT5G58330 EOL2 CLB4 ATMYB34 PDCB1 AtMYB28 DXR ALX8 PSAN ASN2 ATLFNR1 MSP-1 NDHD NDHE
GO:0006796 phosphate-containing compound metabolic ...	BP	1.092e-107	AT1G01080 AtFKGP AT1G01540 ATGPAT4 GAE2 AT1G02150 PSAD-2 FZL PSB27 POR ATHM1 AT1G04420 LIP2 emb2394 LPA19 5PTASE13 OE23 AtSLP1 ATF2KP ATNDI1 EMB2784 ATPCNA1 AT1G07440 ATMPK13 AXS2 PSAO ALB-1V ABC1 AVDE1 CRB AT1G09440 AtHIR1 LRR ATGSTU18 AT1G10850 AT1G10900 ATFD1 AT1G11050 SCM AT1G11340 CBRLK1 AT1G11410 CLPP6 ATSRS AT1G12460 AT1G12800 GAPA-2 AT1G13650 AT1G13730 PnsL2 AT1G14270 PKS2 AT1G14345 PSS1 AT1G15530 CYCA2;3 CP24 NDF1 AT1G16080 HCF173 UP6 FUG1 GLYR2 AT1G18060 ATMPK8 AT1G18660 NDF6 LHCA2*1 ATCLH1 ATLFNR2 CVP1 DRT112 ASG5 AT1G21590 ATNADK2 ATPIP5K1 AT1G22630 AT1G22850 AOR AtPERK10 AT1G26190 Cpn60beta4 AT1G28390 AT1G29700 AT1G29720 RKF1 GlcNAc1pUT1 IMPL1 FEI1 CYP97A3 ACBP PRK ATNSI AT1G32160 ACT1 AT1G32470 GBSS1 PRPL11 AT1G33600 ATSERK2 RPL21C AT1G36280 PMI1 GAPB AtcFBP CYCA1;1 ATMCM2 AT1G44920 5PTASE11 ACD1 RKL1 AtPMEAMT AT1G49380 AT1G49580 FTSH1 GDC1 AT1G51110 AT1G51805 AT1G52220 PSAH-2 AT1G52540 SPA4 TCP3 AT1G53430 ATMUM4 ATMPK18 AtTLP18.3 AT1G54820 ANP2 ZKT PSAG AT1G55960 AT1G56500 ABC4 AtNIK3 AT1G61610 ATSCO1 AT1G62780 NRS/ER AT1G63640 NDF2 AMT1;2 AT1G65190 AT1G65230 cICDH AT1G66130 TMK1 AT1G66330 AT1G67700 PSBY CSK ATHPR1 AT1G68400 CER6 PSRP3/1 BIM2 FLN2 AtTCP15 HEMB1 CMT3 ATCYCD1;1 AOAT2 PGM2 CRR23 AT1G70770 AT1G70985 AT1G71710 AT1G71810 PSY1R AT1G73450 AT1G73460 ATPIN1 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. ATMPK15 AtEIL3 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NDH-O ATKAS2 emb2184 LQY1 ATCLV1 AtVAB1 PETE1 AT1G76110 CYCB2;4 AT1G76450 AtHMGR1 AT1G76570 AT1G77090 PIP5K2 AT1G78040 ATRHM1 AT1G79640 RFO1 AT1G80640 NIP6 AT1G80870 APG2 AT2G01210 RPI2 AT2G01820 AHK4 BRL2 AT2G02780 AT2G03420 AT2G03750 AT2G07689 AKN1 AT2G15020 MCM4 AT2G16750 AtPPa2 HY3 ATHMA4 ALE2 ATGLK1 ALF1 LIP1 PSB29 PDTPI ATSULA BBX18 AtFBA1 AT2G21385 AT2G21960 ATIPS2 AGL22 SCPL8 AT2G23070 AT2G23390 NAPRT2 YCF37 AT2G23950 AT2G24060 PRPL35 AT2G24230 AFR AtDBP1 AT2G25870 ER HO2 AT2G26730 ATCDPMEK AGO4 AT2G27060 AT2G27290 AT2G27680 AT2G28590 ALB3 PY ANTR1 ATVLN1 PBCP ATFC-II CYP71A13 FTSH2 ASKdZeta TCP10 BBX25 MAPKKK17 AtPFA-DSP2 PRPL28 AT2G34460 ABR EDA3 AT2G35050 AT2G35260 GDCH AT2G35390 AT2G35410 SKL2 FEI2 ATCSLA07 ATE2FA AT2G36145 AT2G36350 AT2G36570 ATSIG6 AT2G37050 AT2G37240 AT2G37660 PDX1L4 ATPDX1.1 ATMVD1 ATMTP11 RCA ATCBK3 SSL2 NTRC AT2G41820 AGK1 AT2G41890 AT2G42130 ATMPK20 AT2G43030 AT2G43560 FAB2 ACS1 AT2G43760 5PTase12 BGLU26 AT2G44920 AT2G44970 AT2G45340 AT2G45990 SPA1 PSAP PTI1-4 CAO PHR2 DEG2 AT3G01060 AtSS2 ATCYP38 AT3G01490 ATBCA1 ATRGP1 ATF1 ATGSTF11 NPC3 PDE326 AT3G03770 EMB3119 ATWNK1 ATN AIF1 ATSK12 AT3G06980 ATPUB9 AT3G08680 ATPK1 LHCB4.2 PTAC13 PIP5K9 SPD1 ABCI6 LSF2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 AGC1.5 PGK1 AT3G12930 AT3G13120 FLU AT3G14205 ESM1 SRF7 ATMPK19 ATRHM3 SPA3 ATHM4 AT3G15520 ADS3 MFP1 NDF4 AT3G16850 HCF107 ATCRSH CIPK1 RLK902 NMT1 EMB1865 ATWNK6 IKU2 AT3G19850 PSBTN GLTP3 CYCP2;1 ATWNK2 ATSR2 AT3G23310 AT3G23700 GAE6 ATTOPII AT3G24190 HCF101 PLSP1 AT3G24715 ICK3 ATGHBDH AtNIK2 AAPT2 AT3G25660 AtCHUP1 AT3G25805 LTA2 AT3G26700 CCB1 ATSKL1 ATTSO2 AT3G28040 AT3G29185 AT3G44620 RPL9 JK224 AT3G46370 PTAC16 DUT1 PEX11B AT3G47580 AT3G47650 AT3G48200 AT3G48420 GSA2 BAM2 ARLA1C CRK ICK2 AT3G50685 OEC33 GMD2 ATSSL4 ATWNK5 IMK2 ATG4 PSRP2 CP33 FTSZ2-2 CYP97C1 AT3G53380 AtPPa4 HCEF1 AT3G54210 AT3G54290 PLA PGPS2 PPL1 SBPASE AT3G56010 IMK3 AT3G56290 AT3G56370 AT3G56760 ACSF AT3G57830 AT3G59040 PIF5 GUN4 ACR4 AT3G59780 AT3G60320 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. CDS5 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 CYCP1;1 CSP41A AtcpRRF ATMRK1 AT3G63340 APG1 EMB3126 ATCCD1 RLK4 ANTR2 AtGPAT8 AT4G00560 ASKTHETA AT4G00895 CRK41 TROL AT4G01310 ATGPAT3 AT-RSH1 AT4G02410 AT4G02530 AT4G02630 PSAD-1 EMB3129 AT4G03260 PETC ATPC1 CPK27 ATKEA3 AT4G05090 ATK5 APX4 ATPD AT4G10300 AT4G10390 SPA2 ATMPK5 CYP83A1 PDE226 CIPK4 CYP97B3 ATCCT2 AT4G15545 AtCLA1 PHYD CLPR4 AT4G17560 LIL3:1 AT4G17740 AT4G18030 PHYE CH-42 ATWL4 Encodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death. AK-HSDH PTAC14 BAM3 GHR1 PSBQ B120 AKT2 AT4G22730 PGR5-LIKE CRK21 CRK22 AT4G23740 CRR31 PGI AT4G24750 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) ACP4 CHLM AT4G25280 AtFBA7 AtFBA5 AT4G26540 AGC1-2 AT4G26710 MAP65-2 AT4G26860 FAD4 AT4G27300 NARA5 AT4G28080 PSB28 AT4G28740 emb2726 AT4G29120 AHA2 GAE1 SARK FAD6 ATCIPK6 AT4G31310 HCF153 PGR3 AT4G32000 PDE334 ATSDX1 ATH1 AtGLDP1 AT4G33080 FAB1A ATHDA14 AT4G33500 AtHMAC6 ATOST1 AT4G34090 SEP1 AT4G34220 CLB6 ASE2 MRL1 AT4G34920 HCF244 MCA1 AT4G36180 AT4G36390 ACD2 SQE3 AtVAB2 AT4G38520 ROC1 AtFBA2 AT4G39040 VHA-A3 ATSEC14 SAMC1 ATIPS1 AKN2 AT5G01020 SQD2 AT5G01260 ATPDX1 AT5G01890 STN8 AT5G03140 SBE2.2 AT5G03880 54CP ATLDA AT5G04980 RUL1 AT5G05180 ATEGY2 2-Cys ERL2 AT5G08050 PDE340 AT5G08650 PI-4KBETA2 AtPPa6 PMDH2 PROPEP5 AT5G10020 ATMIPS3 PAS2 AT5G10690 CIPK5 PPD5 ATNADP-ME2 CRN EMB3136 SIG4 AT5G14210 EMB3137 AT5G14410 AT5G14460 ATSK13 ATDEF2 BETA AO AT5G14910 AT5G15910 AT5G15950 AtNIK1 LRR1 AT5G16810 ENH1 PSY AtUGP2 MEX1 AT5G17670 ATSRA1 AT5G18500 PCB2 EMB3013 ADG2 AT5G19940 AT5G20050 ATCPN21 AT5G21222 CIPK26 ATHMA8 CaS HCF136 AT5G23170 AT5G24010 ATSIG5 PGL5 PYR6 ATNEK3 GME ARRPS1 AT5G35170 ATGSL1 AHK2 atylmg3 ATPRFB AT5G37010 AT5G37790 AT5G38520 UDG4 CRK42 AT5G40500 GPDHp FTSH5 AOS ATIPK1 NDH18 ATGLK2 AT5G44520 ATFKBP13 CIPK20 CHL AtNUDT11 APE2 BSK2 PYL1 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. FPS1 AMK2 ADG1 HINT3 AT5G48790 XIP1 AT5G50000 AT5G50100 AT5G50180 OLD5 AT5G50370 AT5G51110 LPA2 AT5G51560 At-NEET ATPGMP AT5G52780 AT5G52970 AT5G53140 ORG1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 AtPSKR2 AHL CRLK1 RPL24 THI1 AT5G55220 AT5G56040 AT5G56790 AT5G56890 PSD2 AHA3 AT5G57610 APO2 NPL1 AT5G58150 NdhN AT5G58520 AT5G58540 FOLK AT5G58950 ATUXS3 AT5G60270 LecRK-I.9 CLB4 PNM1 AT5G61350 AT5G61570 AtTudor2 AHA11 AT5G62710 DXR ATNDPK2 AT5G63410 SNRK2-5 AT5G63700 AT5G63710 SHA1 AT5G63940 PSAN JK218 BAM1 ATLFNR1 AT5G66470 MSP-1 ABA1 AT5G67200 ATEB1C RLK ATPA ATPF ATPH ATPI ATPE ATPB NDHB.1 NDHF NDHD NDHE NDHB.2 ATP6 NAD5
GO:0051186 cofactor metabolic process	BP	1.253e-102	PIP1;3 AtSAM1 POR ATHM1 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase LIP2 TOR2 emb2394 LPA19 HPD AT1G07440 PSAO ALB-1V ABC1 AVDE1 ATSYP111 CRB ATGSTU18 ACLA-1 ATFD1 AT1G12080 AT1G12800 PnsL2 AT1G14345 NDF1 AT1G16080 SPS2 GLYR2 AT1G18060 AT1G18440 NDF6 AT1G19140 LHCA2*1 ATCLH1 ATLFNR2 CVP1 DRT112 ATNADK2 AT1G22630 AOR PDH-E1 AAE14 CYP97A3 PRK ATNSI ACT1 AT1G32470 PRPL11 EMB3003 GAPB ATMCM2 AtBGAL5 FTSH1 GDC1 AT1G51110 AtTLP18.3 PSAG AT1G56050 AtHEMA1 DHNS ABC4 ACLA-2 AT1G62250 KAS ATSCO1 AT1G62780 NDF2 AT1G65230 cICDH AT1G67700 CER6 PHYLLO HEMB1 ABCB26 CRR23 AT1G70770 AT1G71480 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. IQD31 ATKAS2 emb2184 AtGH9B7 LQY1 AT1G76450 AtHMGR1 AT1G76570 AT1G77090 LAX3 SPS1 ATGGH2 RPI2 FLA7 ENR1 AtXYP2 AGP9 AT2G14910 ATGLK1 ALF1 LIP1 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA AtFBA1 AT2G21960 AT2G22230 ATIPS2 SCPL8 NAPRT2 YCF37 PRPL35 AT2G24580 ATDUF3 HO2 KCS11 AT2G26730 ATCDPMEK AT2G27680 ADCS PY EMB3147 ATFC-II ATCOQ3 FTSH2 AT2G34590 EDA3 GDCH AT2G35390 AT2G35410 SKL2 AT2G35760 AT2G36145 MAT3 AT2G37660 CAC3 PDX1L4 ATPDX1.1 ATMVD1 AT2G40400 HEME2 NTRC AT2G43030 BIO2 AT2G43560 FAB2 ACS1 AT2G43760 AT2G44920 KPHMT1 PSAP ATHB-1 ATCYP38 ATBCA1 ATF1 ATGSTF11 PDE326 EMB3119 ACLB-1 AT3G07270 AT3G08030 AT3G08680 ATHY2 SPD1 DGD1 ATHST PGK1 AT3G13040 AT3G13120 AT3G14067 FLU ESM1 HEME1 PRPS20 ATHM4 ADS3 MFP1 NDF4 LPD1 MAT4 CBB1 GluTRBP ELIP AT3G23700 HCF101 ATGHBDH LTA2 ATPRX ATSKL1 AT3G45900 PTAC16 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 ELL1 CYP97C1 HCEF1 ATPTR1 PPL1 ATDFD SBPASE AT3G56010 AT3G56680 ACSF AT3G59040 PIF5 GUN4 AT3G59780 AT3G61080 AT3G61870 CYP20-3 APG3 CSP41A AtcpRRF APG1 EMB3126 ATCCD1 ANTR2 TROL ABC1 HEMG1 AtSAM2 AT4G02530 PETC ATPC1 ATK5 APX4 ATPD AT4G11570 FLA2 CYP83A1 ELIP2 AtCLA1 SPK1 LIL3:1 CH-42 AAH ATSMO1-2 PGR5-LIKE CHLM CGA1 AtFBA7 AtFBA5 AT4G26860 CIP7 AT4G28740 AT4G29120 FAD6 ACDO1 PGR3 PDE334 ATSDX1 ATH1 AtGLDP1 ATHDA14 AT4G34090 SEP1 ERG9 ACD2 AtVAB2 AtFBA2 SQD2 ATPDX1 AIRP2 SBE2.2 ATLDA NOL 2-Cys AT5G08050 FTRA2 AT5G08415 AT5G08650 PMDH2 ATNADP-ME2 TUB6 ABAR SIG4 AO AT5G14910 AT5G14970 AtENODL17 BCCP LRR1 ENH1 PSY MEX1 PCB2 ADG2 CaS HCF136 PGL5 ARRPS1 CAC2 ATGSL1 AHK2 AT5G35970 atylmg3 FTSH5 AOS AT5G43150 ATGLK2 AT5G44520 ATFKBP13 CHL AtNUDT11 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. FPS1 AACT2 ADG1 ACLB-2 AT5G50000 OLD5 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 AT5G56040 GATA21 BIO1 ADCL NdhN AtcPT4 CLB4 AtTudor2 DXR PSAN ATLFNR1 NDHE
GO:0032787 monocarboxylic acid metabolic process	BP	3.193e-102	AT1G01080 PDH-E1 KCS1 ATGPAT4 AT1G02150 AtSAM1 POR KCS2 AT1G04420 LIP2 emb2394 UGT1 ATCTL1 BBX24 AT1G06550 OE23 EMB2784 KCS3 FATB ALB-1V ABC1 AVDE1 CRB ACLA-1 ATFD1 CLPP6 ATGLX1 AT1G12800 GAPA-2 AOC4 AT1G13650 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14270 SBH2 AT1G14345 ADAP UP6 FUG1 ATSOT17 AT1G18660 LHCA2*1 KCS4 JMT ATLFNR2 CVP1 AT1G21670 AT1G22170 AOAT1 AOR UGT74B1 CER60 Cpn60beta4 AT1G29670 PDH-E1 IMPL1 AT1G31710 CYP97A3 PRK ACT1 PKp3 PRPL11 ACC1 GAPB AT1G44920 ACD1 AT1G49380 LACS2 GDC1 ATBG1 mMDH1 AtFAP3 ACP2 AtTLP18.3 ATLOX1 AT1G55260 ATCSLE1 AT1G56190 ATNAS4 AT1G56500 ABC4 ATB2 ACO2 FMO KAS AT1G62780 LACS3 BDG1 AT1G65230 cICDH ATGSR2 AT1G66430 AT1G67280 ATLOX6 AT1G67700 ATKCR1 CER6 PSRP3/1 ATBCA4 AT1G70480 AOAT2 JAZ9 EDA17 ENO1 AT1G74070 ATSOT18 ATSOT16 ATKAS2 emb2184 ACR3 AT1G77090 LACS9 AT1G78040 ATGSTU20 PGK ATNADP-ME4 RGA AT2G03420 LACS8 ENR1 AtOPR3 KCS9 HY3 ALF1 LIP1 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 PLAT2 AT2G22230 SCPL8 AT2G23390 ATMES7 ACL YCF37 AT2G24020 AT2G24060 AT2G25530 FDH HO2 KCS11 ATCDPMEK AT2G27680 ADCS AT103-1A PY ANTR1 AtFAD3 ATFC-II CYP71A13 ATCOQ3 AtCLO3 PRPL28 ATFAH1 EDA3 GDCH AT2G35410 SKL2 ATCSLA07 GAMMA-TIP AT2G36950 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 CAC3 PIP2;6 RCA NTRC AT2G42130 AT2G43030 ATLEUD1 BIO2 AT2G43560 FAB2 ACS1 BGLU26 CHL-CPN10 AT2G44920 AT2G45180 ATPEX16 ATHH2 CYP86A8 AtSLD2 AtGH3.11 CER8 PHR2 AT2G47780 DEG2 ATCYP38 ATBCA1 ATF1 ATGSTF11 PDE326 EMB3119 EMB3004 AT3G06980 PTAC13 AHB2 ABCI6 AtFAD7 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 PGK1 AT3G12930 ATSERAT2;2 AT3G13120 FLU ESM1 ATPME3 HEME1 ATHM4 AT3G15520 ADS3 MFP1 NDF4 AT3G16370 AAE7 LPD1 EMB1865 BCAT4 AT3G20390 APS1 PKP-ALPHA AT3G23700 GAE6 HCF101 ATGHBDH AOC1 AOC2 AT3G25805 LTA2 GAMMA-TIP2 GAPA CCB1 ATSKL1 AT3G29185 AAO2 LTPG2 ATNIT1 RPL9 AT3G47650 DCF AT3G51090 LTP5 ATG4 PSRP2 CP33 CYP97C1 AtPIP2;1 AT3G54210 SETH3 PGPS2 SBPASE AT3G56010 ACSF PIF5 AT3G59780 AT3G60750 ATPIP1 ARATH;BSAS3;1 AtSLD1 AT3G61870 CYP20-3 AtFAP1 AtcpRRF APG1 EMB3126 AT3G63510 ATCCD1 ATT1 TROL AT4G01310 AT4G02530 EMB3129 PETC APR ATPC1 AtMYB74 APX4 ATPD AT4G10300 AT4G10390 AT4G13050 CYP83A1 ATSAHH1 ATECI3 CYP97B3 IAGLU AtCLA1 CLPR4 AT4G17560 LIL3:1 AT4G17650 AT4G18030 CH-42 ATRAB8D ATFAH2 ATSMO1-2 PIP1;5 CER2 PGI TAR2 AT4G24750 ACP4 CHLM B1 AtFBA7 AtFBA5 FAD4 NARA5 AT4G28080 PSB28 emb2726 PFK1 GGP1 FAD6 EMB2797 PGR3 PDE334 AtCESA1 AT4G32590 ATSDX1 ATH1 AtGLDP1 ATHDA14 ATBCA5 ATOST1 AT4G34090 SEP1 CLB6 MRL1 HCF244 AFT AtPLT6 SHM1 AtFBA2 AT4G39040 SHL1 ATSK2 AKN2 CYP79B2 DHS1 SQD2 AT-HSC70-1 SBE2.2 54CP FD-GOGAT ATLDA KCS19 SIR ATNAS1 ATCESA3 AtFAD8 ATEGY2 2-Cys ATNUDX27 FTRA2 AT5G08415 AT5G08650 AtPPa6 PMDH2 AST68 PAS2 AT5G10690 PPD5 TUB6 EMB3137 AT5G14460 ATDEF2 BETA AT5G14910 BCCP2 AT5G16240 BCCP PSY MEX1 AT5G18600 PCB2 AT5G19760 ATMGD2 ATCPN21 IMS3 CaS ARRPS1 CAC2 ATGSL1 AT5G36160 CAT3 AOS NDH18 KCS20 AT5G44020 AT5G44520 ATFKBP13 CHL AT5G45950 KAS1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. LIL3:2 ADG1 KAT5 ATGH9A1 AT5G51140 ATPGMP B2 AT5G52970 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G53750 RPL24 VTC5 AT5G55220 ATPEX5 BIO1 CER3 ADCL LecRK-I.9 CLB4 COB AT5G62210 AT5G62350 DXR ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. ALX8 STR16 ATLFNR1 AT5G66470 MSP-1 ABA1 EPS1 RPS14 ACCD NDHE
GO:0071840 cellular component organization or bioge...	BP	3.527e-99	AT1G01300 ATGPAT4 AT1G02110 AT1G02150 AtSAM1 ATCSLD5 LPA1 NET1D FZL PSB27 POR ATHM1 AT1G04040 ABCC5 AT1G04430 LIP2 AT1G04680 TOR2 AT1G05140 AT1G05150 emb2394 LPA19 UGT1 5PTASE13 ATCTL1 BBX24 RHON1 ATGSL07 OE23 ATPCNA1 PSAO ABC1 AVDE1 ATSYP111 AT1G09200 CRB AT1G09440 iPGAM1 LRR ACLA-1 SCM ATPMEPCRA CLPP6 AT1G11860 ATSRS ELP ATNRT1 ATBETAFRUCT4 AT1G12500 AT1G12800 GAPA-2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14270 AT1G14345 ADL1C ATMAP70-4 CYCA2;3 CP24 NDF1 AT1G16080 ATMYB58 HCF173 UP6 FUG1 AT1G18060 AT1G18360 NDF6 LHCA2*1 JMT ATCLH1 ARF5 TUB5 ATLFNR2 ARAC4 ATEXP11 DRT112 MCD1 AT1G21350 LYM1 AT1G23200 UGT74B1 AT1G26190 AT1G26250 AT-EXP10 MAP65-8 AT1G29070 ATSCAR3 AT1G29700 AT1G30690 FEI1 ATROPGEF14 ACBP PRK AtLrgB AT1G32470 PRPL11 AT-GTL1 AT1G33600 RPL21C ACC1 SKS6 PMI1 GAPB AT1G44000 CYCA1;1 CP22 ATMCM2 AT1G44920 Lhca5 EMB3105 ACT8 AT1G49380 AtCXE5 TUA2 AT1G50120 AT1G50270 AT1G50660 POLGAMMA2 GDC1 HTA10 AT1G51110 AT1G51200 4CL.1 ATB AT1G52220 PSAH-2 ATROPGEF11 ATBG1 ATFPG-1 TCP3 mMDH1 ATMPK18 ATPME1 ATATG18H AtTLP18.3 AT1G54790 ANP2 ATLOX1 AT1G55260 ATDEK1 UKL3 ATCSLE1 AT1G56210 ATNAS4 AT1G56500 SVB ARF1 CCB4 AT1G59860 ABC4 AtNIK3 ATFD2 AT1G60990 AT1G61660 AT1G61740 ACO2 AT1G62660 ATSCO1 AT1G62780 AT1G63010 NRPD1 AT1G63640 AT1G64355 AT1G64370 AT1G64500 AT1G64510 TUA1 CDI Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication). 4CL3 AT1G65230 PTAC4 AtRLP10 cICDH GAD2 ATGSR2 AtMYB20 PMI2 RBCS1A CRWN1 EMB2814 AT1G67700 PSBY AT1G67870 ATHPR1 AT1G68110 CER6 PSRP3/1 FLN2 AT1G69420 AT-EXP1 AtTCP15 HEMB1 CMT3 AT1G70200 PG2 AT1G70550 AtCPB AT1G72230 AT1G72270 LPA3 AT1G73110 ATPIN1 AtEIL3 ENO1 IQD31 AT1G74840 NDH-O ATKAS2 emb2184 UMAMIT5 AtGH9B7 LQY1 ATCLV1 AtVAB1 AT1G76110 sks5 CYCB2;4 AT1G76450 AtHMGR1 AT1G77310 TAPX LAX3 ATTPS1 PSBR AtkdsA1 EMB1047 ATNADP-ME4 CS17 AT1G80030 AAA1 APG2 AT2G01210 RGA ATMAP65-6 AtIDD5 STI ATEXP15 RNE AT2G04280 FLA7 AT2G05790 AT2G05920 ENR1 EXGT-A1 AT2G07170 AT2G11910 OTP51 MCM4 ARAC1 SCY1 HY3 ATCLASP ALE2 ATGLK1 ALF1 PSB29 ATPRP2 PDTPI ATSULA AtFBA1 AT2G21560 CSI1 AT2G22230 AGL22 IAA8 AT2G23360 ATMES3 YCF37 AT2G24060 ALDH11A3 ATRPA2 AT2G25270 AT2G25430 AT2G25800 AT2G25830 OVA4 CYP711A1 ER AT2G26500 AR781 WEB1 KCS11 AT2G26730 SCAB1 AGO4 LHW AT2G27680 CH-CPN60A VHA-A1 AT2G28620 HIS4 ALB3 ATEXP6 ATMTPB1 TUB7 ANTR1 ATVLN1 PBCP KIS PSBW CYP71A13 FTSH2 TCP10 ATGSL03 ARASP ATSUVH2 GALS1 ATRANGAP2 RWA3 ABR AIR9 ATHB-14 EDA3 GDCH AT2G35410 SKL2 FEI2 ATCSLA07 ATERF38 AT2G35880 BLH1 ATE2FA AT2G36200 ATFTSZ2-1 AT2G36350 DML1 GAMMA-TIP AtXTH32 MAT3 ABCB1 ATSIG6 AT2G37540 ATEXP3 AT2G37660 AtAUX1 PSRP4 ATSCAR2 cdf3 RDO2 MAP65-5 PIP2;6 PnsL1 ATEXP4 RCA CYT1 LHCB4.3 ETG1 AT2G41050 NTRC ATVLN2 AT2G42130 AT2G42510 ATMPK20 AT2G43030 AT2G43150 BIO2 AT2G43560 FAB2 AT2G43945 BGLU26 AT2G44870 AFO AGP8 ATPEX16 PEX11D PLIM2a AT2G45870 ATHH2 AT2G45990 SPA1 ROPGAP3 PSAP CAO AtTic20-II CRR6 DEG2 ATCYP38 ATBCA1 AT3G01810 ATRGP1 AT3G02250 ATCOL2 AtUGP1 SDG31 EMB3119 ATCYSD1 ATN AT3G05470 AIF1 AT3G05900 AT3G05910 RWA2 AT3G06980 ATCSLC06 AT3G07540 SCPL27 AT3G08600 AT3G08680 LHCB4.2 AT3G09050 PTAC13 AT3G09730 OMR1 GYRB1 PAL4 ABCI6 AT3G10720 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. emb2738 ACT11 AGC1.5 PGK1 AT3G12930 AT3G13120 AT3G13180 AT3G13226 Cpn60beta2 ATKRS-2 AT3G13510 FLU ATPME3 ATGSL04 IDM1 MEE35 HCF243 PRPS20 ATMT3 ATHM4 AT3G15550 AT3G15680 MFP1 PSAH-1 AQP1 AT3G16270 ABCG29 AT3G16370 JAL35 ATKINESIN-13A AT3G16850 HCF107 AT3G17340 POK1 RLK902 NMT1 EMB1270 PEX3-1 EMB1865 ACT2 ATPREP1 ARC6H AT3G19370 QWRF1 ARC5 CBB1 POLGAMMA1 PSBTN CWLP AT3G22520 ATTSO1 NET1A APS1 PKP-ALPHA ATSR2 AT3G23090 KINESIN-12B AT3G23700 ATSAHH2 ATTOPII HCF101 PLSP1 GAUT8 AFH1 ATGHBDH AtCHUP1 LTA2 ATPRX GAMMA-TIP2 ORF02 GAPA CCB1 ATICE1 ATSKL1 GHS1 LHCB2 AT3G28460 ABCB19 ATEXP5 AT3G29185 AT3G42660 AT3G43610 LTPG2 RPL9 AtXTH31 JK224 AT3G45850 AT3G45930 PTAC16 AT3G47070 PEX11B ATSMC2 AT3G47650 ATATM AT3G48200 AT3G48420 GSA2 AT3G49220 BAM2 OBP1 OEC33 AT3G51140 GMD2 AT3G51280 ATSSL4 AT3G51720 ATG4 AT3G52110 CP33 FTSZ2-2 AtPIP2;1 ACT3 HCEF1 ATGR2 LHCA1 PMR6 PDE329 PPL1 ATTSC13 SBPASE AT3G56290 AT3G56370 PPD6 AT3G56870 PSRP5 ACSF AT3G57060 PrfB3 AGL16 ATVLN3 SPL15 GIS AT3G59040 GUN4 ACR4 AT3G60320 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. CDS5 AT3G60750 MAP65-4 GAUT1 ATPIP1 ARATH;BSAS3;1 AT3G61870 ATL5 APG3 ATIPT3 CSP41A AtcpRRF EMB3126 BRCA2(IV) QUA3 TROL GT72B1 MGP4 ABC1 AT4G01790 AGY1 MCM7 ATXT2 AT4G02530 AT4G02630 EOL1 PSAD-1 EMB3129 AFB1 PETC AT4G04340 EMB2369 ATPC1 PDF2 ATK5 Encodes a putative glycosyl hydrolase family 10 protein (xylanase). AT4G08280 APX4 ATPD LHCB5 AT4G11175 ATMPK5 SKU5 FLA2 PSAL AtENODL19 SDG22 ATSAHH1 EDA38 KINESIN-12A AT4G14330 AT4G14360 APS3 TUA6 AFH3 PPD1 AT4G15830 SPK1 ATOPT3 AT4G16490 AT-EXPR ATG2484-1 ATRAB1C AT4G17560 LIL3:1 AT4G17810 AT4G18030 PHYE ATSS4 TCP2 CH-42 AT4G19410 ATPP2-A1 PTAC14 GALS3 BAM3 PSBQ B120 ATML1 sks4 PGR5-LIKE PIP1;5 ARC1 cpHsc70-1 CER2 PGI AT4G24750 ATRBP31 AT4G25030 ACP4 CHLM ATCNFU3 AT4G26555 GDPDL3 AT4G26710 MAP65-2 VTC2 ATK2 AT4G27435 NARA5 ATEXPB3 PSB28 AT4G28740 PSAE-1 emb2726 ATPAO5 AT4G30020 ATVLN4 AHA2 VEL1 ASHR3 HCF153 ATCSLC05 EMB2797 PGR3 PDE334 AtCESA1 LUG ATHB-8 ATH1 AtGLDP1 ATPME44 FAB1A ATHDA14 AT4G33760 SEP1 ATCAP1 AT4G34600 SSR16 AT4G34730 ASE2 MRL1 SLP2 HCF244 AT4G35320 XCP1 MCA1 ARAC6 AT4G36180 BGAL3 AT4G36390 ACD2 ANT NDH-M pde191 ATROPGEF1 AtVAB2 AT4G38660 AtFBA2 AT4G39040 VHA-A3 SHL1 ATCESA2 SAMC1 AT4G39630 CYP79B2 AT5G01090 LHCB4.1 AT5G01590 AT5G01790 OHP ATMTRNASEII AT5G02370 AT5G02710 ATCSLA09 54CP GYRB2 FD-GOGAT ATLDA SIR ATNAS1 ATCESA3 ATEGY2 NEDD1 2-Cys TBR AT5G06970 AT5G07020 AT5G08050 AT5G08390 AT5G08430 AT5G08650 AAP2 PI-4KBETA2 AtPPa6 PMDH2 AT5G09760 CESA5 AT5G10020 AT5G10390 KAC1 PAS2 AT5G10605 AT5G10960 ATSPS2F HY5 PPD5 AT5G11480 AtMYB3R4 ATNADP-ME2 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 DiT1 ATGSL12 ATCYP20-2 AT5G13140 CRN IQD11 EMB3136 AT5G13770 CCS52B AT5G13980 EMB3137 AT5G14610 ATDEF2 BETA AT5G15070 AtENODL17 APG6 GAUT14 LNG1 AtNIK1 VAT1 BCCP AtMYB43 DHAR3 EMB2247 ENH1 AtUGP2 ATSRA1 ATOBGC EMB40 PCB2 EMB3013 ADG2 AT5G19290 ATOEP80 AT5G19730 TUA3 TUA5 ATXIK AT5G20700 ATCPN21 AT5G20885 CRR42 AT5G22340 emb1211 H2B CaS HCF136 AT5G23480 EFO2 AT5G23750 TUB8 AT5G23910 AT5G24010 ATSIG5 LSU2 AT5G25590 AT5G26330 AT5G27560 ARRPS1 AMOS1 CAC2 ATGSL1 atylmg3 ATPRFB AT5G37010 ARLA1A PMI15 RBCS3B AT5G38520 CRR7 ORTH1 DEG8 AT5G40450 GL3 ATUBC8 AOS TZP NDH18 ATGLK2 TUB4 MCM6 GALS2 KAS1 AT5G46420 AT5G46580 TET1 Encodes the mitochondrial ATP synthase subunit delta. LON2 AT5G47190 FPS1 FRA1 AACT2 ADG1 AT5G48360 ATCAP-C AT5G48900 LPA66 HCT OVA2 DDM2 XIP1 ATGH9A1 AT5G50110 AT5G50180 OLD5 AT5G50420 CAA33 AT5G51110 LPA2 EXL3 ATPGMP CRR1 CCB2 HCF106 AT5G52780 AT5G52960 AT5G52970 PDV1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. PTAC15 CcdA RPL24 VTC5 AT5G55220 ATMAP65-1 AtIAMT1 GDPDL4 ATKCO1 ATOPT1 ATPEX5 NAP1;3 BIO1 APO2 NPL1 AT5G58160 NdhN AT5G58330 AT5G58520 AT5G58540 GIL1 AT5G59690 HTA6 AT5G59970 LecRK-I.9 CLB4 COB PDCB1 VIP4 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AML1 AT5G62350 CDF1 TUB3 ATPEX14 AT5G63700 AT5G63710 SHA1 ALX8 JK218 EMB3144 AT5G64640 CESA6 AT5G65220 AT5G65360 KAC2 BAM1 ATLFNR1 AT5G66470 MSP-1 AT5G66740 ICU2 AT5G67200 IRX15-L ATEB1C PSBA PSBK PSBI ATPA ATPH PSBD PSBC YCF3 NDHJ NDHC YCF4 PETA PSBL PSBF PETG RPS18 PSBB PSBN PSBH PETB PETD YCF5 NDHI NDHA
GO:0044283 small molecule biosynthetic process	BP	1.399e-98	KCS1 PIP1;3 AT1G01630 AtSAM1 FZL POR KCS2 LIP2 AT1G05150 ATCTL1 HPD encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase OE23 AtSLP1 ATNDI1 EMB2784 KCS3 ADT6 PSAO FATB AVDE1 ATSYP111 AT1G09310 CRB iPGAM1 AtHIR1 ACLA-1 AT1G10740 ATFD1 CLPP6 ADT1 ATGLX1 AT1G11860 ATSRS AT1G12080 ELP ATNRT1 AT1G12800 AFB3 AOC4 SBH2 PSS1 AT1G15710 CP24 ADAP UP6 SPS2 AT1G18060 AT1G18460 ATSOT17 AT1G19140 KCS4 JMT ATLFNR2 CVP1 DRT112 AT1G22850 AOAT1 AOR UGT74B1 ASB1 CER60 ARAB-1 AT1G29700 PDH-E1 PSAK AAE14 AT1G30690 AK-HSDH PSAF ATROPGEF14 AT1G31710 CYP97A3 ACBP PRK ACT1 PKp3 AT1G32470 GBSS1 AT1G33110 EMB3003 AT1G35420 ACC1 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 AtBGAL5 AtPMEAMT LACS2 AtCXE5 AT1G51110 PSAH-2 ACP2 AtTLP18.3 ATLOX1 AT1G55260 AT1G55360 ZKT PSAG ATSERAT2;1 AT1G55960 AT1G56190 ATNAS4 ATATP-PRT1 SQE1 AT1G60000 DHNS ABC4 LHCA3 ACO2 FMO KAS AT1G62660 LACS3 BDG1 NDF2 AMT1;2 G-TMT AT1G66130 ATGSR2 AT1G66330 AT1G66430 DIN9 ATLOX6 ATKCR1 PSBY AT1G67950 ATHPR1 AT1G68260 CER6 PHYLLO AT1G70280 AOAT2 JAZ9 AT1G70985 AT1G72500 AT1G72810 LPA3 ATSOT18 ATSOT16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATKAS2 AtGH9B7 PETE1 sks5 AtHMGR1 AT1G76570 ACR3 LACS9 LAX3 AT1G78040 ATGSTU20 SPS1 ATLUP1 PSBR AtkdsA1 ATNADP-ME4 NIP6 LACS8 FLA7 AT2G05920 ENR1 AtOPR3 EXGT-A1 AtXYP2 AGP9 AT2G15020 ATHNIR KCS9 AT2G19940 ALF1 LIP1 PDTPI BBX18 AtFBA1 AT2G21860 PLAT2 AT2G22230 ATIPS2 AAT SCPL8 ATMES3 AT2G24060 ALDH11A3 AFR AT2G25830 FDH ATDUF3 KCS11 AT2G26730 AT2G27680 ADT3 ADCS PY ANTR1 AtFAD3 EMB3147 CYP71A13 ATCOQ3 BBX25 AT2G31670 ATCB5-B AT2G34460 AT2G34590 ATFAH1 GDCH SKL2 ATCSLA07 AT2G35880 BLH1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 AT2G37660 CAC3 ATPDX1.1 ATMVD1 PIP2;6 ATMTP11 PnsL1 RCA CYT1 ATKT2 SSL2 AT2G42220 AT2G42690 ATLEUD1 BIO2 FAB2 ACS1 BGLU26 CHL-CPN10 AT2G44920 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis BEN1 ATPEX16 AT2G45990 KPHMT1 AtSLD2 CER8 CAO CRR6 AT3G01060 AtCGS1 AtSS2 ATCYP38 ATBCA1 AK3 ATMS2 EMB3119 ATCYSD1 AT3G07270 AT3G08680 LHCB4.2 ADK1 OMR1 ABCI6 AT3G10720 AtFAD7 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 ATHST PGK1 AT3G12930 ATSERAT2;2 PUT4 CYP90D1 FLU ATPME3 HEME1 ATHM4 ADS3 JAL35 ECT6 NMT1 AT3G19480 BCAT4 CBB1 ADOF2 AT3G22520 APS1 PKP-ALPHA ATSAHH2 GAE6 ATGHBDH AOC1 AOC2 LTA2 ATPRX AT3G26450 GAMMA-TIP2 ATSKL1 AT3G28200 ATCM1 AAO2 ATNIT1 CAB4 AT3G48460 AHAS GSA2 AT3G51140 ATG4 FTSZ2-2 ELL1 CYP97C1 AtPIP2;1 AT3G54400 ATTSC13 P5CS2 ATDFD SBPASE AT3G56290 ACSF ATWRKY69 IPMI1 PIF5 GUN4 AT3G60750 ARATH;BSAS3;1 AtSLD1 CYP20-3 AtcpRRF APG1 EMB3126 ATCCD1 TROL AT4G01310 AT4G02530 EOL1 PSAD-1 PETC APR ATPC1 AtMYB74 ATPD LHCB5 AT4G10390 FLA2 AT4G13050 CYP83A1 APS3 ATCCT2 AtCLA1 SPK1 CH-42 AK-HSDH ATFAH2 PyrD PRXR1 sks4 AKT2 ATSMO1-2 AT4G23670 CER2 ATHB22 TAR2 ATRBP31 ACP4 B1 GDPDL3 VTC2 AT4G26860 FAD4 ATK2 PSAE-1 GGP1 FAD6 AT4G31310 EMB2797 PDE334 AT4G32590 ATSDX1 ATH1 AtGLDP1 KUP5 AT4G33740 ATOST1 CCoAOMT1 ERG9 SQS2 SLP2 MCA1 AT4G36390 AtPLT6 SQE3 SHM1 AQI ROC1 ATPRP4 AtFBA2 AT4G39040 ATSEC14 ATSK2 ATIPS1 AKN2 CYP79B2 DHS1 AT5G01020 AT5G01090 SQD2 AT5G01260 ATPDX1 FD-GOGAT KCS19 SIR ACR12 ATNAS1 ATCESA3 AtFAD8 2-Cys ERL2 FTRA2 AT5G08415 AT5G08430 AtPPa6 PMDH2 PROPEP5 ATMIPS3 AST68 ASN3 PAS2 TUB6 DiT1 AT5G12970 ATCYP20-2 AT5G13140 ATCHS AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 AT5G14500 BETA GASA4 AtENODL17 BCCP2 AT5G15910 AT5G15950 AT5G16240 VAT1 BCCP LRR1 PSY AtUGP2 ATCIMS PCB2 AT5G19940 ATCPN21 AT5G21100 AT5G21105 AT5G22340 IMS3 CaS ATSIG5 SQE5 AT5G24155 ATCYSD2 DES1 GME AT5G34930 CAC2 ATGSL1 AT5G36160 CAT3 AT5G38520 UDG4 RS5 AT5G41760 AOS ATIPK1 KCS20 AT5G44020 AT5G45280 ATFKBP13 APE2 KAS1 AT5G46580 TET1 PYL1 FPS1 FRA1 AACT2 ACLB-2 ATGH9A1 ATPPOX AT5G50000 AT5G50100 AT5G51110 AT5G51140 CRR1 B2 AT5G52960 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 AT5G53750 TAT7 ATOMT1 THI1 VTC5 ATMAP65-1 AT5G56040 BIO1 ADCL APO2 AtcPT4 ATPDX2 CLB4 ATMYB34 PDCB1 AtTudor2 AT5G62210 DXR Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AT5G63700 ALX8 PSAN ATGCH ASN2 STR16 ATLFNR1 MSP-1 ABA1 EPS1 ACCD NDHE
GO:0044272 sulfur compound biosynthetic process	BP	5.355e-97	AT1G01630 AtSAM1 FZL AtBE2 POR LIP2 AT1G05150 ATCTL1 OE23 EMB2784 PSAO AVDE1 AT1G09310 AtHIR1 ACLA-1 ATGLX1 AT1G11860 ELP ATNRT1 AT1G12800 AFB3 CP24 CYP79F2 BUS1 AtHBP1 ATSOT17 LHCA2*1 ATLFNR2 DRT112 AT1G21440 AOAT1 AOR UGT74B1 PSAK AK-HSDH PSAF FEI1 ATROPGEF14 ACBP PRK AT1G32470 AT1G33110 AT1G35420 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 ACD1 AT1G51340 PSAH-2 ABCD2 AtTLP18.3 AT1G55260 AT1G55360 PSAG ATSERAT2;1 AT1G56190 ATATP-PRT1 SQE1 AT1G60000 ACLA-2 LHCA3 ACO2 FMO AT1G65230 FMO AT1G66430 PSBY ATFXG1 AT1G67950 ATHPR1 AT1G68260 CER6 NRT1.7 AT1G70280 AT1G72500 ATSOT18 ATSOT16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATKAS2 PETE1 ACR3 AT1G78040 PSBR AT2G05920 AKN1 ATHNIR ALF1 LIP1 PDTPI AtFBA1 AT2G22230 SCPL8 ATMES3 ALDH11A3 AT2G24280 AT2G27680 PY CYP71A13 ATCOQ3 AT2G31670 AT2G31790 AT2G35260 GDCH SKL2 BLH1 MAT3 UMAMIT12 ATMVD1 PnsL1 ATKT2 AT2G42220 AT2G42690 ATLEUD1 BIO2 FAB2 ACS1 BGLU26 CAO AtCGS1 ATKT4 AT3G02250 ATGSTF11 ATMS2 EMB3119 ATCYSD1 Encodes a defensin-like (DEFL) family protein. ACLB-1 LHCB4.2 ADK1 ABCI6 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 ATSERAT2;2 FLU ESM1 NDF4 JAL35 LPD1 ECT6 MAT4 BCAT4 CBB1 AT3G20390 ADOF2 AT3G22520 APS1 ATSAHH2 PLSP1 ATGHBDH LTA2 ATPRX AT3G26450 GAMMA-TIP2 ATSKL1 ATMDAR4 UMAMIT47 AT3G45160 PTAC16 CAB4 GSA2 AT3G50685 OEC33 ATG4 FTSZ2-2 AtPIP2;1 AT3G54400 ATGRXCP SBPASE ACSF IPMI1 PIF5 GUN4 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. AT3G60750 ARATH;BSAS3;1 CYP20-3 APG1 TROL AT4G01310 AtSAM2 ATXT2 EOL1 PSAD-1 APR ATPC1 LHCB5 BASS5 CYP83A1 AT4G13840 AtCLA1 CH-42 ATRP1 PRXR1 ATSMO1-2 AT4G23670 CER2 AT4G24930 ATK2 AtENODL2 PSAE-1 AT4G30020 FAD6 PDE334 ATH1 AtGLDP1 KUP5 AT4G33740 CCoAOMT1 SLP2 MCA1 AtGGPPS11 XTH7 AQI ROC1 ATPRP4 AtFBA2 ATCESA2 ATIPS1 AKN2 CYP79B2 AT4G39970 AT5G01020 AT5G01090 SQD2 ATLDA SIR 2-Cys ATMYB29 FTRA2 AT5G08415 AT5G08430 AtPPa6 PMDH2 AST68 PAS2 TUB6 ATCYP20-2 AT5G13140 AT5G13980 AT5G14120 ATIMD1 AT5G14500 GASA4 MEX1 ATCIMS PCB2 AT5G19940 ATCPN21 IMS3 CaS ATCYSD2 DES1 ATGSL1 AT5G38520 DEG8 AT5G41760 FTSH5 AOS AT5G44020 CHL APE2 TET1 PYL1 FRA1 AACT2 ADG1 ACLB-2 ATGH9A1 ATPPOX AT5G50000 AT5G51140 ATPGMP FTSH11 AtPLR1 THI1 ATMAP65-1 AHA3 BIO1 APO2 NPL1 AT5G58330 CLB4 ATMYB34 AtMYB28 DXR PSAN ASN2 ATLFNR1 MSP-1 NDHD NDHE
GO:0044249 cellular biosynthetic process	BP	9.196e-97	LHY AT1G01080 KCS1 AtFKGP encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ASG4 ATGPAT4 AT1G01630 AT1G02110 AT1G02150 CER1 AtSAM1 ATCSLD5 AtD27 FZL AtBE2 AT1G03590 POR ATHM1 AT1G03730 KCS2 IAA3 AXR3 AT1G04420 PDLP2 LIP2 AT1G04800 ATGTF2H2 AT1G05150 AT1G05170 emb2394 BT3 ATCTL1 AT1G05870 ATMYB13 RHON1 ATGSL07 HPD OE23 ATF2KP AT1G07280 EMB2784 ATPCNA1 AT1G07440 KCS3 GATA11 AXS2 ADT6 AT1G08280 PSAO FATB ALB-1V ABC1 AVDE1 AT1G08800 AtMYB60 AT1G09310 CRB AT1G09440 AtHIR1 LRR AT1G10120 ACLA-1 AT1G10740 EMB3103 ATFD1 AT1G11050 ATSS3 CLPP6 ADT1 ATGLX1 AT1G11860 ATSRS Encodes a protein that appears to have 1-amino-cyclopropane-1-carboxylic acid oxidase activity based on mutant analyses. ELP ATNRT1 AT1G12800 AFB3 ICE2 AOC4 AT1G13650 AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14270 SBH2 AT1G14345 AtMYB124 AT1G14460 AT1G14600 PSS1 CYCA2;3 AT1G15710 CP24 ATCCR1 NDF1 ADAP AT1G16080 CYP79F2 BUS1 ATMYB58 HCF173 SPS2 AtHBP1 FUG1 BEE1 AT1G18440 AT1G18460 ATSOT17 AT1G18660 AtMYB47 NDF6 AT1G19140 LHCA2*1 BES1 KCS4 AT1G19490 JMT ATCLH1 BEL10 AT1G19710 ARF5 ATLFNR2 CVP1 DRT112 AT1G21060 AT1G21440 ATNADK2 AGL87 AT1G22630 FB AOAT1 AOR UGT74B1 ASB1 BBX15 CER60 Cpn60beta4 AT1G26790 AtHB23 AT1G27120 SPL11 SRD2 ARAB-1 AT1G29070 AT1G29950 PDH-E1 ARF6 PSAK AAE14 IMPL1 AK-HSDH PSAF FEI1 ATROPGEF14 AT1G31710 CYP97A3 ACBP PRK ACT1 KAN2 PKp3 AT1G32470 GBSS1 PRPL11 AT1G33110 AT-GTL1 AT1G33600 AT1G35420 AT1G35560 RPL21C ACC1 AT1G36280 ATNR2 PMI1 expressed protein localized to the inner membrane of the chloroplast. GAPB AtcFBP CYCA1;1 CP22 ATMCM2 AT1G44920 ABF2 5PTASE11 DGAT3 EMB3105 ACD1 GATB AtPMEAMT AT1G49380 LACS2 AT1G49580 SCL-3 POLGAMMA2 GDC1 AT1G51110 AT1G51340 4CL.1 ADOF1 PSAH-2 FTM6 TCP3 AT1G53290 ATMUM4 ATMSRB1 AT1G53900 AT1G54290 ABCD2 AT1G54410 AT1G54500 ACP2 ATATG18H AtTLP18.3 AT1G54790 ATLOX1 AtIDD7 AT1G55260 AT1G55360 NDF5 ZKT CPN60B PSAG AT1G55690 ATCSLE1 ATSERAT2;1 HAC04 AT1G56050 AT1G56190 ATDI19 ATNAS4 AT1G56500 AT1G57770 ATATP-PRT1 AT1G58170 AtHEMA1 SQE1 ARF1 AT1G60000 DHNS ABC4 ATB2 ACLA-2 ATRECQ4B AT1G61190 AT1G61300 LHCA3 AT1G61610 ACO2 FMO KAS AT1G62660 ATSCO1 AT1G62780 NRS/ER NRPD1 AT1G63640 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. LACS3 AT1G64500 AT1G64510 BDG1 RPOD1 G-TMT AT1G65070 AT1G65220 AT1G65230 ATPAO4 FMO AT1G65870 cICDH ZFP4 ATGSR2 AtMYB20 AT1G66430 DIN9 ATLOX6 EMB2814 AT1G67700 ATKCR1 PSBY ATFXG1 CSK AT1G67950 ATHPR1 AtIDD14 AT1G68260 CER6 PSRP3/1 AT1G68600 AT1G68810 PHYLLO BIM2 FLN2 AtTCP15 HEMB1 CMT3 NRT1.7 AT1G70000 SNL4 ATCYCD1;1 AT1G70280 AT1G70550 AOAT2 JAZ9 PGM2 AT1G72230 AT1G72500 AT1G72810 LPA3 AT1G73110 AT1G73170 AT1G73390 ATPIN1 AT1G73600 AT1G73655 AtEIL3 AT1G73740 BBX16 AT1G74070 ATSOT18 ATSOT16 ATHSP101 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G74840 ATKAS2 RPS9 emb2184 PETE1 AT1G76110 CYCB2;4 AT1G76350 AT1G76450 AtHMGR1 AT1G76880 ACR3 AT1G77090 AT1G77310 LACS9 AT1G78040 RAP2.4 ATTPPB ATGSTU20 SPS1 ATSHB ATRHM1 ATTPS1 emb1473 ATGGH2 ATLUP1 AT1G78995 PSBR ECT8 APL AtkdsA1 AT1G79630 ATNADP-ME4 CS17 AT1G80030 encodes a glycerate kinase which catalyzes the last step of photorespiration C2 cycle. APG2 AT2G01210 MEE65 RGA ARR14 AtIDD5 STI AT2G03420 RNE LACS8 AT2G04700 EMB2761 AT2G05920 ENR1 AtOPR3 AT2G07170 AGT MCM9 AKN1 ARFB1A ATHNIR KCS9 MCM4 ADC1 ATBZIP2 AT2G18630 SCY1 HY3 ATHMA4 AT2G19940 ATGLK1 ALF1 LIP1 AtERF53 PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 AT2G21385 ATRL2 CSI1 PLAT2 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT2G22230 ATIPS2 AAT AGL22 IAA8 SCPL8 DEAR3 AT2G23360 AT2G23390 NAPRT2 ATMES3 YCF37 AT2G23690 BLH4 AT2G24060 PRPL35 PDE319 AT2G24170 ALDH11A3 AT2G24280 ATRPA2 ESE2 AT2G25830 OVA4 AT2G26100 ATHSFA2 CYP711A1 FDH ATDUF3 HO2 KCS11 ATCDPMEK AGO4 LHW AT2G27290 ATNLP1 AT2G27680 ADT3 AT2G28200 DRB2 RAP2.7 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 ALB3 ADCS AT2G29180 PY ANTR1 ATVLN1 AtFAD3 EMB3147 ATFC-II ATC4H CYP71A13 ATCOQ3 FTSH2 AT2G31040 TCP10 ATERF15 BBX25 AT2G31670 AT2G31790 ATGSL03 BAM6 AT2G32640 ATCB5-B ATSUVH2 PRPL28 AT2G33550 AtCRL2 EMB3113 ATHB-14 ATFAH1 EDA3 AT2G35050 AT2G35260 GDCH AT2G35390 AT2G35410 SKL2 AT2G35640 ATCSLA07 ATERF38 AT2G35840 BLH1 NHL12 ATE2FA AT2G36145 AT2G36200 AT2G36350 DML1 AT2G36630 MAT3 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. UMAMIT12 AS1 AT2G37660 CAC3 PSRP4 PDX1L4 ATPDX1.1 RDO2 GAUT7 ATMVD1 PIP2;6 PnsL1 RCA CYT1 ATISA1 AT2G40260 AT2G40400 HEME2 ATKT2 ETG1 CYP98A3 AT2G41060 AT2G41130 ATCBK3 SSL2 ARR8 NTRC AT2G42130 AtSPL9 AT2G42220 ATBZIP34 ATPPC2 AT2G42690 AT2G43030 ATLEUD1 BIO2 AT2G43500 Encodes a defensin-like (DEFL) family protein. AT2G43560 FAB2 ACS1 AT2G43760 AT2G44230 BGLU26 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis BEN1 ATPEX16 KPHMT1 AtSLD2 ARF11 AT2G46810 PIL1 SPL1 CER8 CAO ATMYB12 PHR2 CRR6 DEG2 RPH1 AtCGS1 AtSS2 PnsL3 ATHB-1 ATCYP38 ATBCA1 AK3 ATKT4 ATRGP1 AT3G02250 ATF1 AT3G02750 AT3G02820 PNT1 ATGSTF11 AtUGP1 PDE326 ATMS2 IAA16 EMB3119 PDE181 ATCYSD1 Encodes a defensin-like (DEFL) family protein. AIF1 AT3G06180 AT3G06410 ACLB-1 GATA15 AT3G06980 AT3G07270 AT3G08030 AT3G08660 ATPK1 LHCB4.2 AT3G09050 ATHY2 PTAC13 AT3G09540 CRM3 ADK1 OMR1 ATDFC AtLCY GYRB1 PAL4 SPD1 AHB2 ABCI6 LSF2 AtFAD7 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 ATHST PGK1 AT3G12930 AT3G13000 AT3G13040 ATSERAT2;2 AT3G13120 AT3G13180 ATKRS-2 AT3G13510 PUT4 FLU ESM1 ATPME3 GOX2 GOX1 ATGSL04 ATRHM3 AT3G14890 HEME1 IDM1 MEE35 PRPS20 SPL5 ATHM4 AT3G15520 AT3G15550 AT3G15570 ADS3 MFP1 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. EMB2083 ABCG29 AT3G16350 JAL35 ATKINESIN-13A ATEBP LPD1 HCF107 ECT6 POK1 MAT4 HYH ATACP5 NMT1 WOX1 NRPD2B EMB1270 EMB1865 AT3G18500 ACT2 AT3G19000 ATCAD4 AT3G19480 BCAT4 CBB1 AT3G20230 AT3G20390 POLGAMMA1 AT3G20680 AtBBX32 GluTRBP 4CL5 4CL2 GLTP3 ADOF2 AT3G22520 ATTSO1 ELIP APS1 AT3G23090 bHLH34 ATPHO1 AT3G23700 ATSAHH2 GAE6 ATTOPII AT3G23930 HCF101 ALDH1A AT-HSFC1 PLSP1 ICK3 GAUT8 ATFKBP62 ATGHBDH AT3G25570 AAPT2 AT3G25660 AtCHUP1 AOC1 AOC2 AT3G25805 LTA2 RPL15 ATPRX AT3G26450 GAMMA-TIP2 ORF02 CCB1 ATICE1 ATSKL1 ATTSO2 GHS1 ATMDAR4 RPL12 RPL12-C UMAMIT47 AT3G28460 AT3G29185 ATCM1 AT3G42660 CHR38 AAO2 ATJ ATNIT1 RPL9 AT3G45160 JK224 ATMYB48 PTAC16 DUT1 CAB4 PYE AT3G47650 ATATM AT3G48200 AT3G48420 AT3G48460 AHAS GSA2 AT3G49000 ARLA1C OBP1 CRK ICK2 AT3G50685 BEH1 OEC33 AtHB28 SRS1 GATA6 AT3G51140 GMD2 AT3G51280 ATSSL4 AT3G51510 ATG4 AT3G51950 PSRP2 CP33 FTSZ2-2 ELL1 CYP97C1 ATPAL2 AtPIP2;1 AT3G53680 PYRR HCEF1 AT3G54210 AT3G54290 AT3G54390 AT3G54400 ATGRXCP PGPS2 PDE329 ATTSC13 OVA1 P5CS2 ATDFD SBPASE ESK1 AT3G56010 UGP3 AT3G56290 AT3G56680 AT3G56760 AT3G56870 PSRP5 ACSF AT3G57020 AT3G57030 AT3G57070 PrfB3 AGL16 AT3G57400 ATVLN3 AT3G57800 SPL15 GIS ATWRKY69 IPMI1 PIF5 GUN4 AT3G59780 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. HAT3 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. CDS5 AT3G60750 MAP65-4 GAUT1 HD-GL2-1 ARATH;BSAS3;1 AtSLD1 ATX3 AT3G61870 CYP20-3 ATMYB11 APG3 ATIPT3 CSP41A OEP6 AtcpRRF APG1 EMB3126 ATCCD1 BRCA2(IV) UNE10 AT4G00165 YAB3 AtGPAT8 AT4G00560 AT4G00870 AT4G00895 MEE47 TROL GT72B1 MGP4 AT4G01310 AT4G01460 HEMG1 AtSAM2 ATGPAT3 MCM7 ATXT2 AT4G02530 EOL1 PSAD-1 EMB3129 AFB1 PETC AT4G04340 EMB2369 APR ATPC1 CPK27 PDF2 AtMYB74 PSBQ ATK5 Encodes a putative glycosyl hydrolase family 10 protein (xylanase). APX4 ATPD ATSPS4F AT4G10300 LHCB5 AT4G10390 AT4G11175 ATMPK5 BASS5 AT4G13050 AT4G13540 CYP83A1 AT4G13840 ATSAHH1 KINESIN-12A PDE226 AT4G14330 AT4G14360 bHLH104 NF-YB3 CIPK4 ELIP2 ATTCX2 CYP97B3 ATCCT2 AT4G15430 AtCLA1 AT4G16141 PHYD CLPR4 AtBAM3 ATRAB1C AT4G17560 LIL3:1 AT4G17650 AT4G17740 ATTPS5 AT4G17810 MYC4 APRR2 AT4G18030 PHYE ATSS4 TCP2 CH-42 AT4G18740 AT4G18820 AT4G19460 AK-HSDH PTAC14 ATRAB8D AT4G20760 ATFAH2 GHR1 PyrD AT4G21060 ATRP1 ATM4 ATML1 PRXR1 CYP706A2 ATSMO1-2 PGR5-LIKE AT4G23670 CRF2 ATCSLG3 ATCSLG1 CER2 AGL24 PGI ATHB22 TAR2 AT4G24750 ATRBP31 AT4G24790 AT4G24930 AT4G25030 ACP4 CHLM AT4G25280 B1 CGA1 AtFBA7 AtFBA5 AtWRKY20 AT4G26710 MAP65-2 VTC2 AT4G26860 AT4G26940 FAD4 AT4G27130 ATK2 AT4G27240 CIP7 AT4G27435 AtENODL2 AT4G27560 NARA5 AT4G28080 AT4G28180 AT4G28360 PSB28 PSAE-1 emb2726 IAA27 AT4G29100 AT4G30020 AT4G30180 AHA2 VEL1 AT4G30470 GGP1 FAD6 HCF153 EMB2797 PGR3 PDE334 AT4G32330 AtCESA1 LUG AT4G32590 ATSDX1 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHB-8 ATH1 AtGLDP1 FAB1A ATHDA14 AT4G33500 AtHMAC6 KUP5 AT4G33740 AT4G33760 ATOST1 CCoAOMT1 AT4G34090 SEP1 CLB6 BLH6 SSR16 SQS2 AT4G34730 ASE2 MRL1 AT4G34920 SLP2 AtMYB32 HCF244 AT4G35270 XCP1 MCA1 AT4G36180 CYP84A1 GATA7 AT4G36390 AT4G36530 BEE2 ATRL3 AtPLT6 AtGGPPS11 BLH2 ACD2 ANT SQE3 XTH7 SHM1 ATCAD6 ATCAD7 pde191 AQI ATMYB4 AT4G38690 ROC1 ATPRP4 AtFBA2 AT4G39040 VHA-A3 ATSEC14 APL3 ATCAD9 ATCESA2 SAMC1 ATSK2 AT4G39630 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. ATIPS1 AKN2 CYP79B2 AT4G39970 DHS1 AT5G01020 AT5G01090 SQD2 ATPDX1 AT5G02160 AT5G02370 PLL2 AT5G02460 AT5G02940 ATRAB AtNCS1 SBE2.2 AT5G03870 54CP GYRB2 FD-GOGAT ATLDA KCS19 SIR ACR12 ATOFP13 ATNAS1 ATCESA3 AT5G05180 AtFAD8 ATEGY2 AT5G05790 2-Cys TBR HAT14 AT5G07020 ERL2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ATMYB29 AT5G08050 TCP17 BIM1 ATAIH AT5G08390 FTRA2 AT5G08415 AT5G08430 PDE340 AT5G08650 AtSRT2 PI-4KBETA2 AtPPa6 PMDH2 CESA5 ATMIPS3 AST68 ASN3 PAS2 AIL6 AT5G10690 AT5G10970 ATSPS2F HY5 OCP3 PPD5 AtMYB3R4 TINY2 AT5G12110 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 DiT1 AT5G12970 ATGSL12 ATCYP20-2 AT5G13140 EMB3136 ABAR SIG4 CCS52B ATCHS AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 EMB3137 AT5G14410 AT5G14460 AT5G14500 ATDEF2 AT5G14700 BETA AO AT5G14910 AT5G14970 GASA4 GAUT14 BCCP2 AtbZIP3 AT5G15950 AT5G16240 VAT1 BCCP AtMYB43 EMB2247 PSY MEX1 PSRP6 ATCIMS anac088 ATSRA1 AT5G18550 PCB2 BAM9 BUD2 ADG2 AT5G19290 AT5G19940 AtHBP5 ATMGD2 ATCPN21 AT5G21100 AT5G21105 ATHMA8 AT5G22020 anac089 AT5G22340 IMS3 CaS HCF136 AT5G23280 HMGB6 AT5G23480 ATSIG5 SQE5 ATSS1 AT5G24320 LSU2 AT5G25590 AtYUC6 AT5G26330 AT5G27560 ATCYSD2 DES1 AT5G28300 AT5G28500 GME ARRPS1 AT5G34930 AT5G35170 AMOS1 CAC2 ATGSL1 AHK2 atylmg3 AT5G36160 ATPRFB AT5G36230 CAT3 AT5G37010 ARF8 ARLA1A AT5G38520 CRR7 UDG4 ORTH1 DEG8 RS5 AT5G40500 RPL27 ATUBC8 AT5G41760 AT5G42070 FTSH5 AOS SPL2 TZP NDH18 KCS20 AT5G44020 ATGLK2 MCM6 AT5G45290 ATFKBP13 AT5G45720 CHL AtNUDT11 APE2 KAS1 AT5G46420 BSK2 AT5G46580 bHLH071 TET1 PYL1 ATNIG1 AT5G46910 Encodes the mitochondrial ATP synthase subunit delta. AT5G47190 AT5G47390 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. NF-YB2 FPS1 FRA1 AMK2 AACT2 ADG1 ATFKBP65 AT5G48590 ATCAP-C HCT OVA2 DDM2 ATMYB111 ACLB-2 ATGH9A1 ATPPOX AT5G50000 OLD5 AT5G51110 AT5G51140 ATTPPA LPA2 ATPGMP AT5G52010 CRR1 SCL8 B2 AT5G52660 ATWRKY27 AT5G52960 AT5G52970 FTSH11 AT5G53340 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 AT5G53750 TAT7 ATOMT1 PTAC15 RPL24 THI1 VTC5 AT5G55220 ATMAP65-1 AtIAMT1 CRR21 AT5G55950 AT5G56840 GATA21 LUT2 CIA2 PSD2 AHA3 BIO1 CER3 ADCL APO2 NPL1 NdhN AT5G58330 AT5G58520 AT5G58540 EOL2 FOLK AtcPT4 AtVIP2 ARF4 ATPDX2 CLB4 ATMYB34 PNM1 PDCB1 PIF7 AtMYB28 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AtTudor2 ARF1-BP AT5G62210 ATGT18 CDF1 AHA11 DXR BT1 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AT5G63700 SHA1 ALX8 PSAN ATGCH CESA6 ASN2 AT5G65220 ATHB-5 KAC2 STR16 ATLFNR1 AT5G66470 MSP-1 ENY AT5G66770 ABA1 ICU2 EPS1 TOE3 AT5G67200 IRX15-L PSBA MATK RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 RPS14 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBF PSBE ORF31 PETG PSAJ RPS18 RPL20 CLPP1 PSBB PSBT PSBN PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 RPL2.1 RPL23 RPS7 YCF5 NDHD NDHE NDHG NDHI NDHA RPS15 RPS7.2 RPL23.2 RPL2.2 NAD9 RPL16 ATP6
GO:0009657 plastid organization	BP	4.448e-95	AT1G02150 LPA1 FZL PSB27 POR ATHM1 emb2394 RHON1 OE23 PSAO ABC1 CRB CLPP6 AT1G11860 ATSRS AT1G12800 GAPA-2 AT1G16080 FUG1 AT1G18060 ATLFNR2 DRT112 MCD1 AT1G21350 PRK AtLrgB AT1G32470 PRPL11 RPL21C PMI1 GAPB AT1G44000 CP22 AT1G44920 Lhca5 AT1G49380 POLGAMMA2 GDC1 AT1G51110 AT1G52220 PSAH-2 TCP3 AtTLP18.3 AT1G56500 ATSCO1 AT1G62780 AT1G64500 AT1G64510 AT1G65230 PTAC4 PMI2 AT1G67700 PSBY ATHPR1 CER6 PSRP3/1 FLN2 AT1G70200 AT1G73110 emb2184 LQY1 AT1G76450 TAPX EMB1047 CS17 AT1G80030 APG2 AtIDD5 RNE SCY1 ATGLK1 PSB29 PDTPI ATSULA AtFBA1 YCF37 ALDH11A3 OVA4 AT2G26500 WEB1 AT2G27680 CH-CPN60A ALB3 PBCP PSBW FTSH2 TCP10 ARASP EDA3 GDCH AT2G35410 ATFTSZ2-1 ATSIG6 PSRP4 NTRC AT2G42130 AT2G43560 AT2G44870 AFO SPA1 PSAP DEG2 ATCYP38 ATCOL2 AT3G06980 AT3G09050 PTAC13 ABCI6 emb2738 PGK1 AT3G13120 AT3G13180 Cpn60beta2 ATKRS-2 MEE35 ATHM4 MFP1 PSAH-1 HCF107 EMB1270 EMB1865 ATPREP1 ARC6H QWRF1 ARC5 POLGAMMA1 PSBTN AT3G23700 HCF101 PLSP1 AtCHUP1 GAPA CCB1 ATSKL1 AT3G28460 AT3G29185 JK224 PTAC16 AT3G47070 AT3G47650 AT3G48200 AT3G48420 OEC33 AT3G51140 ATSSL4 ATG4 CP33 FTSZ2-2 HCEF1 ATGR2 PDE329 PPL1 SBPASE AT3G56290 PPD6 PSRP5 ACSF PrfB3 AT3G59040 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. AT3G61870 APG3 CSP41A AtcpRRF EMB3126 TROL AGY1 AT4G02530 PSAD-1 EMB3129 PETC EMB2369 ATPC1 PDF2 ATPD AT4G11175 PSAL LIL3:1 AT4G17810 TCP2 PTAC14 PSBQ ATML1 PGR5-LIKE ARC1 cpHsc70-1 AT4G24750 ACP4 ATCNFU3 NARA5 AT4G28740 PSAE-1 emb2726 EMB2797 PGR3 PDE334 ATH1 ATHDA14 AT4G33760 SEP1 SSR16 AT4G34730 ASE2 MRL1 pde191 AtFBA2 SAMC1 ATMTRNASEII AT5G02710 FD-GOGAT ATEGY2 2-Cys AT5G07020 AT5G08050 AT5G08650 PMDH2 KAC1 PPD5 AT5G11480 EMB3136 AT5G13770 ATDEF2 APG6 DHAR3 EMB2247 ENH1 ATOBGC ADG2 ATOEP80 ATCPN21 emb1211 CaS HCF136 EFO2 ATSIG5 LSU2 ARRPS1 AMOS1 atylmg3 ATPRFB PMI15 AT5G38520 DEG8 NDH18 ATGLK2 KAS1 AT5G47190 ADG1 OVA2 CAA33 AT5G51110 LPA2 HCF106 AT5G52970 PDV1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. PTAC15 RPL24 AT5G55220 NPL1 AT5G58330 CLB4 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. CDF1 ALX8 EMB3144 AT5G65220 KAC2 ATLFNR1 AT5G66470 MSP-1
GO:0006090 pyruvate metabolic process	BP	1.357e-94	AT1G01080 PDH-E1 AT1G02150 AtSAM1 POR AT1G04420 LIP2 emb2394 ATCTL1 BBX24 EMB2784 ALB-1V ABC1 AVDE1 CRB CLPP6 ATGLX1 AT1G12800 GAPA-2 AT1G13650 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14270 AT1G14345 FUG1 AT1G18660 LHCA2*1 CVP1 AT1G22170 AOR Cpn60beta4 CYP97A3 ACT1 PKp3 PRPL11 GAPB AT1G44920 ACD1 AT1G49380 GDC1 mMDH1 AtTLP18.3 AT1G56190 AT1G56500 ABC4 ATB2 ACO2 AT1G62780 AT1G65230 cICDH ATGSR2 AT1G67700 CER6 PSRP3/1 ENO1 AT1G74070 ATKAS2 emb2184 AT1G77090 AT1G78040 PGK RGA AT2G03420 ALF1 LIP1 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 SCPL8 AT2G23390 YCF37 AT2G24060 HO2 ATCDPMEK AT2G27680 PY ATFC-II PRPL28 EDA3 AT2G35410 SKL2 GAMMA-TIP ATSIG6 AT2G37660 NTRC AT2G42130 AT2G43030 AT2G43560 FAB2 ACS1 AT2G44920 ATHH2 PHR2 DEG2 ATCYP38 ATF1 ATGSTF11 PDE326 EMB3119 AT3G06980 PTAC13 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 PGK1 AT3G12930 AT3G13120 FLU ESM1 AT3G15520 ADS3 MFP1 NDF4 LPD1 EMB1865 AT3G20390 APS1 PKP-ALPHA AT3G23700 HCF101 ATGHBDH AT3G25805 LTA2 GAMMA-TIP2 GAPA CCB1 ATSKL1 AT3G29185 RPL9 AT3G47650 ATG4 PSRP2 CP33 CYP97C1 AtPIP2;1 AT3G54210 SBPASE AT3G56010 ACSF PIF5 AT3G59780 AT3G60750 ATPIP1 ARATH;BSAS3;1 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 ATCCD1 TROL AT4G01310 AT4G02530 EMB3129 ATPC1 APX4 ATPD AT4G10300 CYP83A1 ATSAHH1 CYP97B3 AtCLA1 CLPR4 AT4G17560 LIL3:1 AT4G18030 CH-42 PIP1;5 PGI AT4G24750 ACP4 CHLM AtFBA7 AtFBA5 NARA5 AT4G28080 PSB28 emb2726 PFK1 FAD6 PGR3 AtCESA1 ATH1 AtGLDP1 ATHDA14 AT4G34090 SEP1 CLB6 MRL1 HCF244 AFT AtFBA2 AT4G39040 SHL1 SQD2 AT-HSC70-1 SBE2.2 54CP ATLDA SIR ATCESA3 ATEGY2 AT5G08650 PMDH2 AT5G10690 PPD5 TUB6 EMB3137 AT5G14460 ATDEF2 AT5G14910 PSY MEX1 PCB2 AT5G19760 ATCPN21 CaS ARRPS1 ATGSL1 AOS NDH18 ATFKBP13 CHL Encodes the mitochondrial ATP synthase subunit delta. ADG1 ATGH9A1 ATPGMP AT5G52970 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 CLB4 COB AT5G62350 DXR ATNDPK2 AT5G66470 NDHE
GO:0016043 cellular component organization	BP	8.842e-93	AT1G01300 ATGPAT4 AT1G02110 AT1G02150 AtSAM1 ATCSLD5 LPA1 NET1D FZL PSB27 POR ATHM1 AT1G04040 ABCC5 AT1G04430 AT1G04680 TOR2 AT1G05140 AT1G05150 emb2394 LPA19 UGT1 5PTASE13 ATCTL1 BBX24 RHON1 ATGSL07 OE23 ATPCNA1 PSAO ABC1 ATSYP111 AT1G09200 CRB iPGAM1 LRR ACLA-1 SCM ATPMEPCRA CLPP6 AT1G11860 ATSRS ELP ATNRT1 ATBETAFRUCT4 AT1G12800 GAPA-2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14270 AT1G14345 ADL1C ATMAP70-4 CYCA2;3 CP24 NDF1 AT1G16080 HCF173 UP6 FUG1 AT1G18060 JMT ATCLH1 ARF5 TUB5 ATLFNR2 ARAC4 ATEXP11 DRT112 MCD1 AT1G21350 LYM1 AT1G23200 UGT74B1 AT1G26190 AT1G26250 AT-EXP10 MAP65-8 ATSCAR3 AT1G29700 AT1G30690 FEI1 ATROPGEF14 ACBP PRK AtLrgB AT1G32470 PRPL11 AT-GTL1 AT1G33600 RPL21C ACC1 SKS6 PMI1 GAPB AT1G44000 CYCA1;1 CP22 ATMCM2 AT1G44920 Lhca5 EMB3105 ACT8 AT1G49380 TUA2 AT1G50270 AT1G50660 POLGAMMA2 GDC1 HTA10 AT1G51110 AT1G51200 4CL.1 ATB AT1G52220 PSAH-2 ATROPGEF11 ATBG1 ATFPG-1 TCP3 mMDH1 ATMPK18 ATPME1 ATATG18H AtTLP18.3 ANP2 ATLOX1 AT1G55260 ATDEK1 UKL3 AT1G56210 ATNAS4 AT1G56500 SVB ARF1 CCB4 AT1G59860 ABC4 AtNIK3 ATFD2 AT1G60990 AT1G61660 AT1G61740 ACO2 AT1G62660 ATSCO1 AT1G62780 AT1G63010 NRPD1 AT1G63640 AT1G64355 AT1G64370 AT1G64500 AT1G64510 TUA1 CDI Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication). 4CL3 AT1G65230 PTAC4 AtRLP10 cICDH GAD2 ATGSR2 PMI2 CRWN1 EMB2814 AT1G67700 PSBY AT1G67870 ATHPR1 AT1G68110 CER6 PSRP3/1 FLN2 AT1G69420 AT-EXP1 AtTCP15 CMT3 AT1G70200 PG2 AtCPB AT1G72270 LPA3 AT1G73110 ATPIN1 AtEIL3 ENO1 IQD31 AT1G74840 NDH-O emb2184 UMAMIT5 AtGH9B7 LQY1 ATCLV1 AtVAB1 AT1G76110 sks5 CYCB2;4 AT1G76450 AtHMGR1 AT1G77310 TAPX LAX3 ATTPS1 PSBR AtkdsA1 EMB1047 ATNADP-ME4 CS17 AT1G80030 AAA1 APG2 AT2G01210 RGA ATMAP65-6 AtIDD5 STI ATEXP15 RNE AT2G04280 FLA7 AT2G05790 AT2G05920 ENR1 EXGT-A1 AT2G07170 AT2G11910 OTP51 MCM4 ARAC1 SCY1 HY3 ATCLASP ALE2 ATGLK1 ALF1 PSB29 ATPRP2 PDTPI ATSULA AtFBA1 AT2G21560 AT2G22230 AGL22 IAA8 AT2G23360 ATMES3 YCF37 AT2G24060 ALDH11A3 ATRPA2 AT2G25270 AT2G25430 AT2G25830 OVA4 CYP711A1 ER AT2G26500 AR781 WEB1 KCS11 AT2G26730 SCAB1 AGO4 LHW AT2G27680 CH-CPN60A VHA-A1 AT2G28620 HIS4 ALB3 ATEXP6 ATMTPB1 TUB7 ANTR1 ATVLN1 PBCP KIS PSBW CYP71A13 FTSH2 TCP10 ATGSL03 ARASP ATSUVH2 ATRANGAP2 ABR AIR9 ATHB-14 EDA3 GDCH AT2G35410 SKL2 FEI2 ATCSLA07 AT2G35880 BLH1 ATE2FA AT2G36200 ATFTSZ2-1 AT2G36350 DML1 GAMMA-TIP MAT3 ABCB1 ATSIG6 AT2G37540 ATEXP3 AT2G37660 AtAUX1 PSRP4 ATSCAR2 cdf3 RDO2 MAP65-5 PIP2;6 PnsL1 ATEXP4 RCA CYT1 ETG1 AT2G41050 NTRC ATVLN2 AT2G42130 AT2G42510 ATMPK20 AT2G43030 AT2G43150 BIO2 AT2G43560 FAB2 AT2G43945 BGLU26 AT2G44870 AFO AGP8 ATPEX16 PEX11D PLIM2a AT2G45870 ATHH2 AT2G45990 SPA1 ROPGAP3 PSAP CAO AtTic20-II CRR6 DEG2 ATCYP38 ATBCA1 AT3G01810 ATRGP1 AT3G02250 ATCOL2 AtUGP1 SDG31 EMB3119 ATCYSD1 ATN AT3G05470 AIF1 AT3G05900 AT3G06980 ATCSLC06 AT3G07540 SCPL27 AT3G08680 AT3G09050 PTAC13 AT3G09730 OMR1 GYRB1 ABCI6 AT3G10720 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. emb2738 ACT11 AGC1.5 PGK1 AT3G12930 AT3G13120 AT3G13180 AT3G13226 Cpn60beta2 ATKRS-2 AT3G13510 ATPME3 ATGSL04 IDM1 MEE35 HCF243 ATMT3 ATHM4 AT3G15550 AT3G15680 MFP1 PSAH-1 AQP1 AT3G16270 ABCG29 AT3G16370 JAL35 ATKINESIN-13A AT3G16850 HCF107 AT3G17340 POK1 RLK902 NMT1 EMB1270 PEX3-1 EMB1865 ACT2 ATPREP1 ARC6H AT3G19370 QWRF1 ARC5 CBB1 POLGAMMA1 PSBTN CWLP AT3G22520 ATTSO1 NET1A APS1 ATSR2 KINESIN-12B AT3G23700 ATSAHH2 ATTOPII HCF101 PLSP1 GAUT8 AFH1 ATGHBDH AtCHUP1 LTA2 GAMMA-TIP2 ORF02 GAPA CCB1 ATICE1 ATSKL1 AT3G28460 ABCB19 ATEXP5 AT3G29185 AT3G42660 AT3G43610 JK224 AT3G45850 AT3G45930 PTAC16 AT3G47070 PEX11B ATSMC2 AT3G47650 ATATM AT3G48200 AT3G48420 AT3G49220 BAM2 OBP1 OEC33 AT3G51140 GMD2 AT3G51280 ATSSL4 AT3G51720 ATG4 AT3G52110 CP33 FTSZ2-2 AtPIP2;1 ACT3 HCEF1 ATGR2 PMR6 PDE329 PPL1 ATTSC13 SBPASE AT3G56290 AT3G56370 PPD6 AT3G56870 PSRP5 ACSF AT3G57060 PrfB3 AGL16 ATVLN3 SPL15 GIS AT3G59040 GUN4 ACR4 AT3G60320 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. CDS5 AT3G60750 MAP65-4 GAUT1 ATPIP1 ARATH;BSAS3;1 AT3G61870 ATL5 APG3 ATIPT3 CSP41A AtcpRRF EMB3126 BRCA2(IV) QUA3 TROL GT72B1 MGP4 ABC1 AT4G01790 AGY1 MCM7 ATXT2 AT4G02530 EOL1 PSAD-1 EMB3129 AFB1 PETC AT4G04340 EMB2369 ATPC1 PDF2 ATK5 AT4G08280 ATPD AT4G11175 ATMPK5 SKU5 FLA2 PSAL AtENODL19 SDG22 ATSAHH1 EDA38 KINESIN-12A AT4G14330 AT4G14360 APS3 TUA6 AFH3 PPD1 AT4G15830 SPK1 ATOPT3 AT4G16490 AT-EXPR ATG2484-1 ATRAB1C LIL3:1 AT4G17810 PHYE ATSS4 TCP2 AT4G19410 ATPP2-A1 PTAC14 BAM3 PSBQ B120 ATML1 sks4 PGR5-LIKE PIP1;5 ARC1 cpHsc70-1 PGI AT4G24750 ATRBP31 AT4G25030 ACP4 ATCNFU3 AT4G26555 GDPDL3 AT4G26710 MAP65-2 VTC2 ATK2 NARA5 ATEXPB3 PSB28 AT4G28740 PSAE-1 emb2726 ATPAO5 AT4G30020 ATVLN4 AHA2 VEL1 ASHR3 HCF153 EMB2797 PGR3 PDE334 AtCESA1 LUG ATHB-8 ATH1 AtGLDP1 ATPME44 FAB1A ATHDA14 AT4G33760 SEP1 ATCAP1 AT4G34600 SSR16 AT4G34730 ASE2 MRL1 SLP2 HCF244 MCA1 ARAC6 AT4G36180 BGAL3 AT4G36390 ANT NDH-M pde191 ATROPGEF1 AtVAB2 AT4G38660 AtFBA2 AT4G39040 VHA-A3 SHL1 SAMC1 AT4G39630 CYP79B2 AT5G01090 AT5G01590 OHP ATMTRNASEII AT5G02370 AT5G02710 ATCSLA09 54CP GYRB2 FD-GOGAT ATLDA SIR ATNAS1 ATCESA3 ATEGY2 NEDD1 2-Cys TBR AT5G06970 AT5G07020 AT5G08050 AT5G08390 AT5G08430 AT5G08650 AAP2 PI-4KBETA2 AtPPa6 PMDH2 AT5G09760 AT5G10020 AT5G10390 KAC1 PAS2 AT5G10960 ATSPS2F HY5 PPD5 AT5G11480 AtMYB3R4 ATNADP-ME2 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 ATGSL12 ATCYP20-2 AT5G13140 CRN EMB3136 AT5G13770 CCS52B AT5G13980 AT5G14610 ATDEF2 BETA AT5G15070 AtENODL17 APG6 GAUT14 LNG1 AtNIK1 VAT1 BCCP DHAR3 EMB2247 ENH1 AtUGP2 ATSRA1 ATOBGC EMB40 EMB3013 ADG2 AT5G19290 ATOEP80 AT5G19730 TUA3 TUA5 ATXIK AT5G20700 ATCPN21 AT5G20885 CRR42 AT5G22340 emb1211 H2B CaS HCF136 AT5G23480 EFO2 TUB8 AT5G23910 AT5G24010 ATSIG5 LSU2 AT5G25590 AT5G27560 ARRPS1 AMOS1 CAC2 ATGSL1 atylmg3 ATPRFB AT5G37010 ARLA1A PMI15 AT5G38520 CRR7 ORTH1 DEG8 AT5G40450 GL3 ATUBC8 AOS TZP NDH18 ATGLK2 TUB4 MCM6 KAS1 AT5G46580 TET1 Encodes the mitochondrial ATP synthase subunit delta. LON2 AT5G47190 FPS1 FRA1 AACT2 ADG1 AT5G48360 ATCAP-C AT5G48900 LPA66 HCT OVA2 DDM2 XIP1 ATGH9A1 AT5G50180 OLD5 AT5G50420 CAA33 AT5G51110 LPA2 EXL3 ATPGMP CRR1 CCB2 HCF106 AT5G52780 AT5G52960 AT5G52970 PDV1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. PTAC15 CcdA RPL24 VTC5 AT5G55220 ATMAP65-1 GDPDL4 ATKCO1 ATOPT1 ATPEX5 NAP1;3 BIO1 APO2 NPL1 AT5G58160 NdhN AT5G58330 GIL1 AT5G59690 HTA6 AT5G59970 LecRK-I.9 CLB4 COB PDCB1 VIP4 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AML1 AT5G62350 CDF1 TUB3 ATPEX14 AT5G63700 AT5G63710 SHA1 ALX8 JK218 EMB3144 AT5G64640 CESA6 AT5G65220 AT5G65360 KAC2 BAM1 ATLFNR1 AT5G66470 MSP-1 AT5G66740 ICU2 AT5G67200 ATEB1C PSBA PSBK PSBI ATPH PSBD PSBC YCF3 NDHJ NDHC YCF4 PETA PSBL PSBF PETG RPS18 PSBB PSBN PSBH PETD YCF5 NDHI NDHA
GO:0090407 organophosphate biosynthetic process	BP	6.018e-91	AT1G01080 AtFKGP ATGPAT4 AT1G02150 POR AT1G04420 LIP2 emb2394 AtSLP1 ATNDI1 EMB2784 ATPCNA1 AXS2 ALB-1V ABC1 AVDE1 CRB CLPP6 AT1G12800 AT1G13650 AT1G13730 AT1G14270 AT1G14345 PSS1 UP6 FUG1 AT1G18060 AT1G18660 LHCA2*1 CVP1 ATNADK2 AT1G22850 AOR Cpn60beta4 AT1G29700 CYP97A3 ACBP ACT1 GBSS1 PRPL11 AT1G36280 GAPB ATMCM2 AT1G44920 ACD1 AtPMEAMT AT1G49380 GDC1 ATMUM4 AtTLP18.3 ZKT AT1G55960 AT1G56500 ABC4 AT1G62780 NRS/ER NDF2 AMT1;2 AT1G65230 AT1G66130 AT1G66330 AT1G67700 CER6 PSRP3/1 BIM2 FLN2 AOAT2 AT1G70985 ATPIN1 AT1G74070 ATKAS2 emb2184 AtHMGR1 AT1G76570 AT1G77090 ATRHM1 NIP6 AT2G03420 AT2G15020 MCM4 ATHMA4 ALF1 LIP1 PSB29 PDTPI ATSULA BBX18 AtFBA1 AT2G21385 ATIPS2 SCPL8 AT2G23390 NAPRT2 YCF37 AT2G24060 AFR HO2 ATCDPMEK AT2G27290 AT2G27680 PY ATFC-II BBX25 PRPL28 AT2G34460 EDA3 AT2G35390 AT2G35410 SKL2 ATE2FA ATSIG6 AT2G37240 AT2G37660 PDX1L4 ATPDX1.1 ATMVD1 ATMTP11 SSL2 NTRC AT2G42130 AT2G43030 AT2G43560 FAB2 ACS1 AT2G43760 AT2G44920 AT2G45990 PHR2 DEG2 AT3G01060 AtSS2 ATCYP38 ATF1 ATGSTF11 PDE326 EMB3119 AT3G06980 PTAC13 SPD1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 PGK1 AT3G12930 AT3G13120 FLU ESM1 ATRHM3 AT3G15520 ADS3 MFP1 NDF4 NMT1 EMB1865 GLTP3 AT3G23700 HCF101 ATGHBDH AAPT2 AT3G25660 AT3G25805 LTA2 CCB1 ATSKL1 ATTSO2 AT3G29185 RPL9 AT3G47650 ARLA1C GMD2 ATG4 PSRP2 CP33 CYP97C1 AT3G54210 AT3G54290 PGPS2 SBPASE AT3G56010 AT3G56290 ACSF PIF5 AT3G59780 CDS5 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 ATCCD1 AtGPAT8 AT4G00560 AT4G00895 TROL AT4G01310 ATGPAT3 AT4G02530 EMB3129 ATPC1 APX4 ATPD AT4G10300 CYP83A1 CYP97B3 ATCCT2 AtCLA1 CLPR4 AT4G17560 LIL3:1 AT4G17740 AT4G18030 CH-42 AK-HSDH PTAC14 AKT2 PGI AT4G24750 ACP4 CHLM AT4G26710 AT4G26860 NARA5 AT4G28080 PSB28 emb2726 AHA2 FAD6 AT4G31310 HCF153 PGR3 PDE334 ATSDX1 ATH1 AtGLDP1 ATHDA14 AtHMAC6 AT4G34090 SEP1 CLB6 ASE2 MRL1 AT4G34920 HCF244 MCA1 AT4G36390 SQE3 AtFBA2 AT4G39040 VHA-A3 ATSEC14 ATIPS1 SQD2 AT5G01260 ATPDX1 SBE2.2 54CP ATLDA AT5G05180 ATEGY2 PDE340 AT5G08650 PI-4KBETA2 PMDH2 PROPEP5 ATMIPS3 AT5G10690 PPD5 EMB3137 AT5G14410 AT5G14460 ATDEF2 AO AT5G14910 AT5G15910 AT5G15950 PSY AtUGP2 MEX1 PCB2 ATCPN21 ATHMA8 CaS ATSIG5 ARRPS1 AT5G38520 UDG4 AT5G40500 GPDHp AOS ATIPK1 NDH18 AT5G44520 ATFKBP13 CHL AtNUDT11 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. FPS1 ADG1 AT5G50100 OLD5 ATPGMP AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 RPL24 AT5G55220 PSD2 AHA3 FOLK CLB4 PNM1 AHA11 DXR ATNDPK2 AT5G63700 AT5G66470 ABA1 ATPA ATPF ATPH ATPI ATPE ATPB NDHE ATP6
GO:1901566 organonitrogen compound biosynthetic pro...	BP	7.249e-91	AT1G01630 AtSAM1 FZL POR LIP2 AT1G05150 ATCTL1 OE23 EMB2784 ADT6 PSAO ALB-1V AVDE1 AT1G09310 CRB AtHIR1 ACLA-1 CLPP6 ADT1 ATGLX1 AT1G11860 ATSRS ELP AT1G12800 AFB3 SBH2 PSS1 AT1G15710 CP24 AT1G18440 ATSOT17 NDF6 DRT112 ATNADK2 AOAT1 AOR UGT74B1 ASB1 PSAK AK-HSDH PSAF ATROPGEF14 AT1G31710 CYP97A3 ACBP PRK ACT1 AT1G32470 PRPL11 AT1G33110 AT1G35420 AT1G36280 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 AtPMEAMT AT1G51110 PSAH-2 AtTLP18.3 AT1G55260 AT1G55360 PSAG ATSERAT2;1 AT1G56050 AT1G56190 ATNAS4 ATATP-PRT1 AtHEMA1 SQE1 AT1G60000 LHCA3 ACO2 FMO ATGSR2 AT1G66430 AT1G67700 ATKCR1 PSBY AT1G67950 ATHPR1 AT1G68260 CER6 FLN2 HEMB1 AT1G70280 AOAT2 AT1G72500 AT1G72810 LPA3 ATSOT18 ATSOT16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATKAS2 emb2184 PETE1 AT1G76450 ACR3 AT1G78040 ATGSTU20 PSBR AT2G05920 AtOPR3 ATHNIR ADC1 ATHMA4 AT2G19940 ATGLK1 ALF1 LIP1 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AtFBA1 AT2G22230 AAT SCPL8 NAPRT2 ATMES3 AT2G24060 ALDH11A3 AT2G25830 ATDUF3 HO2 ATCDPMEK ATNLP1 AT2G27680 ADT3 ADCS PY ATFC-II CYP71A13 ATCOQ3 AT2G31670 EDA3 GDCH AT2G35390 AT2G35410 SKL2 BLH1 MAT3 AT2G37660 PDX1L4 ATPDX1.1 PnsL1 AT2G40400 HEME2 ATKT2 SSL2 NTRC AT2G42220 AT2G42690 AT2G43030 ATLEUD1 BIO2 FAB2 ACS1 AT2G43760 BGLU26 CHL-CPN10 AT2G44920 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis KPHMT1 CAO CRR6 AtCGS1 ATCYP38 AK3 PDE326 ATMS2 EMB3119 ATCYSD1 AT3G07270 AT3G08030 LHCB4.2 ATHY2 ADK1 OMR1 SPD1 ABCI6 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 PGK1 AT3G12930 ATSERAT2;2 AT3G13120 PUT4 FLU ATPME3 HEME1 PRPS20 ATHM4 ADS3 JAL35 ECT6 MAT4 NMT1 AT3G19480 BCAT4 CBB1 GluTRBP ADOF2 AT3G22520 ELIP APS1 AT3G23700 ATSAHH2 GAE6 HCF101 ATGHBDH AT3G25570 LTA2 ATPRX AT3G26450 GAMMA-TIP2 ATSKL1 ATCM1 ATNIT1 PTAC16 CAB4 AHAS GSA2 AT3G51140 ATSSL4 ATG4 FTSZ2-2 CYP97C1 AtPIP2;1 PYRR HCEF1 AT3G54400 ATTSC13 P5CS2 ATDFD SBPASE AT3G56680 ACSF AT3G57020 AT3G57030 IPMI1 PIF5 GUN4 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 APG3 CSP41A AtcpRRF EMB3126 ATCCD1 AT4G00895 TROL AT4G01310 HEMG1 AtSAM2 AT4G02530 EOL1 PSAD-1 APR ATPC1 APX4 ATPD LHCB5 CYP83A1 ELIP2 ATCCT2 AtCLA1 LIL3:1 CH-42 AK-HSDH PyrD PRXR1 ATSMO1-2 AT4G23670 CER2 TAR2 ATRBP31 CHLM CGA1 ATK2 CIP7 PSAE-1 AHA2 GGP1 FAD6 PDE334 ATH1 AtGLDP1 AtHMAC6 KUP5 AT4G33740 CCoAOMT1 SEP1 ASE2 SLP2 MCA1 AT4G36390 AtPLT6 ACD2 AQI ROC1 ATPRP4 AtFBA2 AT4G39040 VHA-A3 ATSEC14 ATSK2 ATIPS1 AKN2 CYP79B2 DHS1 AT5G01020 AT5G01090 SQD2 ATPDX1 AtNCS1 SIR ATNAS1 AT5G08050 ATAIH AT5G08430 PDE340 AT5G08650 AtPPa6 PMDH2 AST68 ASN3 PAS2 TUB6 AT5G12970 ATCYP20-2 AT5G13140 ABAR AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 AT5G14500 AO GASA4 AT5G15950 VAT1 PSY ATCIMS PCB2 BUD2 AT5G19940 ATCPN21 AT5G21100 AT5G21105 ATHMA8 AT5G22020 AT5G22340 IMS3 CaS HCF136 ATCYSD2 DES1 ARRPS1 AT5G34930 ATGSL1 AT5G36160 CAT3 AT5G41760 AOS AT5G44020 ATGLK2 ATFKBP13 CHL AtNUDT11 APE2 AT5G46580 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. FRA1 ATGH9A1 ATPPOX AT5G50000 OLD5 AT5G51110 AT5G51140 CRR1 AT5G52960 AT5G52970 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 THI1 ATMAP65-1 GATA21 AHA3 BIO1 ADCL APO2 ATPDX2 CLB4 ATMYB34 PNM1 PDCB1 AHA11 DXR ATNDPK2 PSAN ATGCH ASN2 STR16 MSP-1 ATPA ATPF ATPH ATPI ATPE ATPB NDHE ATP6
GO:0050896 response to stimulus	BP	1.526e-85	LHY KCS1 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT1G01300 PYL9 ASG4 ATFRO2 ATGPAT4 PIP1;3 AT1G02110 CER1 AtSAM1 ATCSLD5 NET1D AT1G03440 POR ATHM1 AT1G04040 ABCC5 KCS2 IAA3 AXR3 AT1G04430 AT1G04680 TOR2 ATGTF2H2 AT1G05070 ATGLR3.4 UGT1 5PTASE13 BT3 ATCTL1 encodes a flavonol-7-O-rhamnosyltransferase involved in the formation of rhamnosylated flavonols BBX24 ATMYB13 RHON1 AT1G06550 OE23 ATNDI1 SR45a AtRLP1 AT1G07400 ATRAB-A2B AT1G07440 MT1C KCS3 ATMPK13 ATVAM2 ADT6 ABC1 AVDE1 ATSYP111 AtMYB60 CRB iPGAM1 LRR ATGSTU18 ATGSTU17 ACLA-1 AT1G10850 ATFD1 AT1G11050 SCM CBRLK1 ADT1 ATGLX1 AT1G11860 Encodes a protein that appears to have 1-amino-cyclopropane-1-carboxylic acid oxidase activity based on mutant analyses. ELP ATNRT1 ATBETAFRUCT4 AT1G12244 PHR1 AT1G12460 AFB3 ICE2 CYP71B2 Encodes protein phosphatase 2A (PP2A) B'theta subunit. Targeted to peroxisomes. Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. AT1G14200 AT1G14210 PKS2 SBH2 RHA2A AT1G15160 AT1G15180 CYCA2;3 AtAVP1 CP24 ATCCR1 ADAP ATOCT3 BUS1 AT1G16680 ACR11 ATRABA1B AT1G17200 ABCG11 ATEGY3 ATMPK8 AT1G18420 ATSOT17 AtMYB47 NRT1.9 LHCA2*1 BES1 KCS4 ATDHAR1 JMT ATCLH1 AT1G19710 AT1G19840 ARF5 APS2 ATLFNR2 ARAC4 DRT112 AT1G20470 ASG5 AT1G20823 AT1G20870 AT1G21590 LYM1 AT1G22690 ATRABG3B FB AT1G23030 AT1G23130 AOAT1 AOR MLP423 UGT74B1 ARL1 ASB1 CER60 AtHB23 ATGSTU13 LCR ABCB13 ABCB14 AGP31 AtRLP4 SRD2 AT1G29430 AT1G29500 SAUR68 AT1G29660 AT1G29670 RKF1 AB165 PDH-E1 ARF6 AT1G30440 UGT78D1 KUF1 FEI1 AT1G31710 ACBP PRK AT1G32220 KAN2 NRT1.5 GBSS1 AT1G33080 AT1G33110 AT-GTL1 AT1G33600 OHP2 ATSERK2 EMB2756 RPL21C ACC1 SHM7 ATNR2 GAPB AtcFBP CYCA1;1 CP22 ABF2 5PTASE11 AT1G47530 mtLPD1 AT1G48090 ACD1 RKL1 AT1G49010 ACT8 LACS2 AT1G49740 TUA2 AT1G50280 ATHX AT1G50380 SCL-3 ATHKL1 GDC1 AT1G51200 AT1G51340 AT1G51400 ABCG12 4CL.1 ATB ADOF1 F-ATMBP ATMBP ATBG1 TSA1 ATFPG-1 FRS6 SPA4 TCP3 mMDH1 TTL1 ATMPK18 ATMSRB1 ESP AT1G54050 AT1G54410 ATATG18H AtTLP18.3 ATLOX1 AtIDD7 ZKT CPN60B ATSERAT2;1 AT1G56190 ATDI19 AT1G56500 AT1G58170 AtHEMA1 AAP1 SQE1 AT1G59740 ARF1 AT1G59860 ATB2 ATRECQ4B ATFD2 AT1G61100 AT1G61190 DWA3 AT1G61300 AT1G61660 AT1G61740 ATGPT2 ACO2 KAS AT1G62660 AT1G63010 NRPD1 AT1G63640 AT1G64150 AT1G64360 AT1G64370 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. LACS3 BDG1 AMT1;2 RPOD1 4CL3 AT1G65070 AtRLP10 ATPP2-A5 ATPAO4 AT1G65870 cICDH GAD2 AT1G66080 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. TMK1 ATGSR2 AT1G66330 RGL PMI2 DIN9 RBCS1A AT1G67280 ATLOX6 EMB2814 CSK AT1G67865 AT1G67870 ATHPR1 AT1G68400 CER6 AT1G68600 AT1G68780 CLE12 AGO7 AT-EXP1 AtTCP15 SHW1 AT1G70000 SNL4 AXY4 PG2 ATBCA4 AT1G70480 AT1G70550 ABCB26 MMZ2 JAZ9 PGM2 AT1G70770 MLP28 MLP43 AT1G71140 AT1G71695 AtCPB AT1G72270 PSY1R AT1G72840 AT1G73170 ATPIN1 AT1G73650 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. ATMPK15 AtEIL3 BBX16 SPPA ATSOT16 ATHSP101 ATHVA22A QKY AT1G74840 ALDH10A8 ATKAS2 isoflavone reductase, putative, identical to SP:P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile PF02716: isoflavone reductase. Involved in response to oxidative stress. UMAMIT5 AtGH9B7 AT1G75800 ATCLV1 AtVAB1 ATCDSP32 AT1G76110 AT1G76450 AtHMGR1 AT1G76570 AT1G76670 AT1G76800 AT1G77310 TAPX LAX3 PIP5K2 AT1G77800 AT1G78010 RAP2.4 AUF1 ATGSTU20 ATSHB ATRHM1 ATTPS1 ATGGH2 PSBR ECT8 PGK RFO1 AT1G80030 NIP6 AT1G80850 AT2G01210 RGA ARR14 AT2G01820 AHK4 BRL2 AT2G02780 AT2G03390 LHCB2 PGR5 ENR1 AtOPR3 EXGT-A1 AGT AT2G14900 ARFB1A AT2G15320 ATHNIR KCS9 ADC1 ATGLR2 ARAC1 AHK1 ATSYP112 HY3 ATHMA4 AT2G19310 AT2G19650 AT2G19780 AT2G19940 ATCLASP AAS ATGLK1 ALF1 AtERF53 PSB29 LAX2 ATCSP4 PDTPI AT2G21200 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AT2G21220 AtFBA1 AT2G21340 AT2G21560 ATRL2 AT2G21830 SEP2 PLAT2 AT2G22230 ATIPS2 AT2G22360 AT2G22420 AGL22 IAA8 AGP17 AT2G23390 ATXLG1 ATMES7 ATMES3 AT2G24230 ATRPA2 AFR ATGPX1 AT2G25530 AtDBP1 emb2410 PDF1.3 PDF1.2b AT2G26110 ATHSFA2 CYP711A1 FDH ER AR781 KCS11 AT2G26690 AT2G26730 ABCG32 ATCDPMEK AGO4 AT2G27060 ADT3 AT2G28200 AT2G28320 DRB2 RAP2.7 HIS4 ATEXP6 ATMTPB1 AT103-1A TUB7 PY ANTR1 AtFAD3 ATZIP6 PBCP ATC4H CYP71A13 FTSH2 ASKdZeta TCP10 ATERF15 BBX25 ATNTH1 ATMYO5 AT2G32240 ATGLR3.7 ATGRP23 ATCOP1 ATSUVH2 AtCLO3 ATUBC24 EMB3113 AT2G34060 ABR ABCC2 AIR9 ATHB-14 AT2G34930 GDCH FEI2 ATCSLA07 AT2G35760 AT2G35840 BLH1 AT2G36430 DML1 AT2G36570 GAMMA-TIP MAT3 ABCB1 AT2G36950 ATSIG6 ATPAL1 PIP2;2 PIP2;3 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ABCG33 AS1 ATEXP3 AT2G37660 LCD1 AtAUX1 PDX1L4 ATPDX1.1 PYL4 cdf3 RDO2 ANNAT4 ATPT2 PIP2;6 NATA1 ATMTP11 RCA CYT1 AT2G39980 LHCB4.3 ETG1 CYP98A3 AT2G41040 AT2G41060 ATCBK3 ARR8 NTRC AT2G41820 ATBZIP34 ATPPC2 AT2G42690 ATMPK20 AT2G42900 ATPAO2 Encodes a defensin-like (DEFL) family protein. FAB2 ACS1 ATHOL1 BGLU26 AT2G44920 AFO AT2G45340 ATHH2 SPA1 AtGH3.11 ATCNGC12 ARF11 AT2G46690 ROPGAP3 PSAP PIL1 PTI1-4 AtBOR1 AtGolS1 CER8 CAO ATMYB12 PHR2 AGP26 RPH1 AtSS2 ATHB-1 ATCYP38 ATBCA1 ATKT4 ATRGP1 AT3G02250 RAD23-3 MEE31 AT3G02750 AT3G02820 AT3G02910 ATGSTF11 AtUGP1 NPC3 PDE326 AT3G03770 ATMS2 IAA16 EMB3119 AtRLP31 AT3G05640 AIF1 AT3G05990 FRS7 RWA2 AT3G06750 AT3G07310 ATPUB9 AT3G08030 AT3G08620 AT3G08640 AT3G08660 AT3G08680 ATPK1 LHCB4.2 ATHY2 Fes1A AT3G09440 ATPAH1 ADK1 AT3G09980 AT3G10060 AT3G10350 AHB2 ATWI-12 AT3G11110 AtFAD7 AT3G11490 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 FLA18 AT3G12050 ACT11 AT3G12210 ATTBP2 ATHSP70 DRT100 AtZIP1 PGK1 ATSERAT2;2 AT3G13226 AT3G13510 FLU ESM1 ATPME3 SRF7 GOX2 GOX1 ATMPK19 HEME1 IDM1 ATMT3 AT3G15356 ATHM4 AT3G15470 AT3G15550 AT3G15570 ADS3 TPR4 AQP1 ABCG29 AT3G16350 AHP4 AT3G16370 JAL35 Lectin like protein whose expression is induced upon treatment with chitin oligomers. ATRALF23 AT3G16670 ATEBP AT3G16850 AT3G17120 MAT4 CIPK1 HYH AT3G17640 ATACP5 mRNA level of the MEB5.2 gene (At3g17800) remains unchanged after cutting the inflorescence stem RLK902 NMT1 AT3G18050 BTS EMB1865 ATPUB29 ACT2 ATPLT5 ATPREP1 AT3G19370 PUB25 ATCAD4 BCAT4 CBB1 AT3G19850 AT3G20390 ATGRP-5 POLGAMMA1 AT3G20820 AtBBX32 4CL5 4CL2 UGT84A2 AT3G21690 ATSGP2 AT3G21950 contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069, however this protein does not have the protein kinase domain AT3G22104 ATWNK2 AT3G22520 ATTSO1 AT3G22810 ELIP APS1 PKP-ALPHA ATSR2 AT3G23090 bHLH34 ATPHO1 AT3G23700 ATSAHH2 ATTOPII AT3G24190 ALDH1A PLSP1 ATFKBP62 AFH1 ATGHBDH AAPT2 AOC1 AOC2 CYP71B22 AT3G26450 AT3G26490 GAMMA-TIP2 GAPA ATSNM1 ATICE1 DRB3 ATTSO2 LHCB2 ATMDAR4 RPL12-C AT3G28040 AT3G28200 ABCB15 AT3G28460 ABCB19 ATGSTU27 ATJ AT3G44380 AT3G44450 AT3G44820 JK224 ATMYB48 AT3G46370 FLA4 AT3G46630 AT3G46730 PTAC16 DUT1 AT3G47070 ATPLC8 ATSMC2 CAB4 AT3G47580 PYE AT3G47830 CHL ALDH2 ATATM DIN11 BAM2 ATBCAT-3 AtRLP44 ARLA1C OBP1 OEC33 AT3G50840 SRS1 GATA6 F3'H ATGLR3.6 ATWNK5 IMK2 AT3G52360 AT3G52740 AT3G52960 AtRLP45 ATPAL2 CYP71B5 AtPIP2;1 AtPPa4 PYRR HCEF1 SCR ATBTAF1 PIP2;5 LHCA1 PMR6 AT3G54930 PLA GSTL2 A11 ATTSC13 P5CS2 SBPASE ESK1 UGP3 IMK3 AT3G56370 ACSF SIP2 AT3G57020 BPG2 AT3G57830 GIS PIF5 GUN4 ACR4 AT3G59940 AT3G60290 AT3G60320 AT3G60750 SDR1 ATPIP1 ARATH;BSAS3;1 AT3G61900 CYP20-3 AT3G62110 ABCB21 CP12 CSP41A AtcpRRF ATCCD1 BRCA2(IV) EDA8 PIP1;4 ASKTHETA AHDP AT4G00880 TROL GT72B1 AGY1 AtSAM2 MCM7 AT-RSH1 AT4G02410 ATXT2 AT4G02530 EOL1 AT4G02940 AT4G03010 AtRBP-DR1 AFB1 PETC ATHM2 CPK27 AtMYB74 ATK5 ARGAH2 APX4 ATPD ATSPS4F ATDET1 LHCB5 AT4G10390 SPA2 ATMPK5 AT4G12000 BASS5 PME1 Hop3 SKU5 AT4G12690 FLA2 AtENODL19 CYP83A1 SHM4 ATSAHH1 SBP1 The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. ATECI3 CIPK4 APS3 ELIP2 AT4G14740 TUA6 AT-BETA-AMY AT4G15430 UGT84A1 AT4G15545 AtCLA1 ATVAMP724 AT4G15830 AtSWEET17 PHYD ATOPT3 AT4G16490 AT4G16980 CLPR4 AtBAM3 ATG2484-1 DELTA-TIP2 AT4G17350 ATRAB1C AT4G17560 LIL3:1 AT4G17650 AT4G17680 AT4G17740 MYC4 ALMT12 APRR2 PHYE ATSS4 KAT2 ATWL4 AtRLP51 ATNLM2 ERD3 AT4G19460 Encodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death. ATPP2-A1 BAM3 GHR1 PSBQ B120 ATM4 MSRB2 AT4G21910 PRXR1 sks4 AKT2 AT4G22620 AT4G22730 PGR5-LIKE CRK22 PIP1;5 AT4G23670 AT4G23740 CRR31 ATYSL1 cpHsc70-1 AT4G24350 AGL24 ATHB22 TAR2 ATRBP31 ATHVA22D AT4G25030 ACP4 MSRA4 AT4G25290 ATDTX35 ABCB2 CGA1 AtFBA7 AT4G26540 AtWRKY20 AT4G26710 VTC2 FAD4 AT4G27350 CIP7 ATMTM1 AT4G28080 ATEXPB3 emb2726 IAA27 ATHXK1 ADS1 ATPAO5 AT4G30020 AT4G30060 ATVLN4 AHA2 VEL1 AT4G30400 SARK BRS1 scpl29 FAD6 ATCIPK6 ACDO1 EMB2797 ENP ATGPX7 AT4G32190 PDE334 APX6 AT4G32330 AtCESA1 LUG ATSDX1 ATHB-8 ATH1 AtGLDP1 AT4G33500 AT4G33560 ATOST1 CCoAOMT1 SEP1 AT4G34220 ALDH3 CLB6 ATCAP1 SSR16 AT4G34920 AtMYB32 APX3 CAT2 PIP2;7 HCF244 ATGLR3.2 AFT MCA1 ARAC6 AT4G36180 CYP84A1 GATA7 ALDH3F1 BEE2 ACD2 MEL1 HHP4 SQE3 SHM1 ATCAD7 AQI ATROPGEF1 AtVAB2 ATMYB4 AT4G38660 AT4G38690 AT4G38700 ROC1 AT4G38840 AtFBA2 AT4G39050 VHA-A3 SHL1 AKN2 CYP79B2 AT4G39960 DHS1 ATGB3 LAC8 AT5G01090 SQD2 ATPDX1 LHCB4.1 AT5G01890 OHP Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ABCI20 AT5G02370 MT2B AT-HSC70-1 ATRAB AtNCS1 ATCSLA09 54CP FD-GOGAT ATPAL3 KCS19 SIR ATNAS1 RUL1 ATCESA3 AtCHIL AtFAD8 2-Cys FTIP1 ERL2 ATMSRA2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ATMYB29 CYP75B1 AT5G08050 BIM1 AT5G08430 ATFLS1 AT5G08650 NDC1 AAP2 AtSRT2 PI-4KBETA2 AtPPa6 PMDH2 CESA5 AT5G10010 AT5G10020 ATMIPS3 AtRABH1e PAS2 AIL6 CIPK5 AT5G10990 ATSPS2F HY5 OCP3 AtMYB3R4 AT5G11650 ATNADP-ME2 ATMSL10 AT5G12110 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 DiT1 ATGSL12 AT5G13140 AtSWEET15 AT5G13360 SVR3 SIG4 ZIF1 ZIFL1 CCS52B ATCHS AT5G14120 ATIMD1 AT5G14210 ATSK13 BETA AT5G14940 GASA4 ATCNGC2 APG6 LNG1 AtbZIP3 AT5G15950 AtNIK1 BCCP LRR1 AtMYB43 DHAR3 molecular function has not been defined, was shown involved in oxidative stress tolerance. UGT78D2 ENH1 AtUGP2 MEX1 ATCIMS AT5G18040 SIP1;2 ATOBGC NSH3 ADG2 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. AT5G19730 AT5G19760 TUA3 TUA5 AT5G19970 AT5G20050 HHP1 ATMGD2 AT5G20700 ATCPN21 AT5G20885 CIPK26 IMS3 CaS HCF136 EFO2 TUB8 SLAH3 ATSIG5 ATSS1 AT5G24320 ATYSL2 LSU2 ATVSP1 CRY3 DGR2 ATRD22 BGLU37 AtTGG1 SFP1 AMOS1 CAC2 AT5G35450 ATGSL1 AHK2 ARF8 ARLA1A PMI15 RBCS3B RBCS2B RBCS1B UDG4 AHP3 RS5 AT5G40450 DRB5 ATUBC8 AtMfl1 FTSH5 AOS ATIPK1 NDH18 KCS20 AT5G43870 AT5G44050 ABCI21 ATGLK2 LCR77 PDF1.2c AtPP2-A6 CIPK20 APE2 KAS1 AT5G46390 AT5G46420 BSK2 PYL1 ATNIG1 AT5G46910 Encodes the mitochondrial ATP synthase subunit delta. LON2 AT5G47190 AT5G47250 AT5G47390 FPS1 AT5G47800 ATRBOHD PAT1 ADG1 AT5G48500 AT5G48540 ATFKBP65 AT5G48590 ATCAP-C ATSDI1 KAT5 HCT HRB1 ATCP1 AAP6 XIP1 ATGH9A1 cpHsc70-2 AT5G50915 CAA33 AT5G51140 LPA2 EXL3 AT5G51560 ATPGMP ATBAG1 CRR1 EFO1 ATHS83 AT5G52660 ATWRKY27 FTSH11 GLT1 AT5G53500 AT5G53750 ATMLO11 AtPSKR2 AT5G53900 ATOMT1 CRLK1 AT5G54660 THI1 VTC5 AT5G55620 ATKCO1 ATOPT1 AtHsp90-3 AtHsp90.2 AT5G56040 ATPEX5 GATA21 NAP1;3 ATVDAC4 AT5G57710 APO2 NPL1 AT5G58150 NdhN AT5G58390 FOLK ATPLC5 DDB2 GIL1 LecRK-I.9 ARF4 CLB4 ATMYB34 COB PNM1 PDCB1 VIP4 AT5G61240 PIF7 EMB2728 AtMYB28 AtTudor2 ARF1-BP AT5G62210 AT5G62350 TUB3 DXR BT1 ATNDPK2 AT5G63410 ATFP3 SNRK2-5 AT5G63710 SHA1 AtBGAL10 AAP4 AT5G63940 ALX8 DCT JK218 AT5G64460 CESA6 CLEL ABCF5 ASN2 ATHB-5 BAM1 XTH6 ATRLP57 ATLFNR1 AT5G66560 MSP-1 ENY sks17 ABA1 ICU2 TOE3 AT5G67200 ATEB1C RLK AT5G67385 ATPA NDHJ NDHC ATPB RBCL PETB NDHI NDHA
GO:0009240 isopentenyl diphosphate biosynthetic pro...	BP	1.631e-85	AT1G01080 AT1G02150 POR AT1G04420 LIP2 emb2394 EMB2784 ALB-1V ABC1 AVDE1 CRB CLPP6 AT1G12800 AT1G13650 AT1G14270 AT1G14345 FUG1 AT1G18660 LHCA2*1 CVP1 AOR Cpn60beta4 CYP97A3 ACT1 PRPL11 GAPB AT1G44920 ACD1 AT1G49380 GDC1 AtTLP18.3 AT1G56500 ABC4 AT1G62780 AT1G65230 AT1G67700 CER6 PSRP3/1 AT1G74070 ATKAS2 emb2184 AtHMGR1 AT1G77090 AT2G03420 ALF1 LIP1 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 SCPL8 AT2G23390 YCF37 AT2G24060 HO2 ATCDPMEK AT2G27680 PY ATFC-II PRPL28 EDA3 AT2G35410 SKL2 ATSIG6 AT2G37660 ATMVD1 NTRC AT2G42130 AT2G43030 AT2G43560 FAB2 ACS1 AT2G44920 PHR2 DEG2 ATCYP38 ATF1 ATGSTF11 PDE326 EMB3119 AT3G06980 PTAC13 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 PGK1 AT3G12930 AT3G13120 FLU ESM1 AT3G15520 ADS3 MFP1 NDF4 EMB1865 AT3G23700 HCF101 ATGHBDH AT3G25805 LTA2 CCB1 ATSKL1 AT3G29185 RPL9 AT3G47650 ATG4 PSRP2 CP33 CYP97C1 AT3G54210 SBPASE AT3G56010 ACSF PIF5 AT3G59780 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 ATCCD1 TROL AT4G01310 AT4G02530 EMB3129 ATPC1 APX4 ATPD AT4G10300 CYP83A1 CYP97B3 AtCLA1 CLPR4 AT4G17560 LIL3:1 AT4G18030 CH-42 PGI AT4G24750 ACP4 CHLM NARA5 AT4G28080 PSB28 emb2726 FAD6 PGR3 ATH1 AtGLDP1 ATHDA14 AT4G34090 SEP1 CLB6 MRL1 HCF244 AtFBA2 AT4G39040 SQD2 SBE2.2 54CP ATLDA ATEGY2 AT5G08650 PMDH2 AT5G10690 PPD5 EMB3137 AT5G14460 ATDEF2 AT5G14910 PSY MEX1 PCB2 ATCPN21 CaS ARRPS1 AOS NDH18 ATFKBP13 CHL ADG1 ATPGMP AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 CLB4 DXR ATNDPK2 AT5G66470 NDHE
GO:0046490 isopentenyl diphosphate metabolic proces...	BP	1.631e-85	AT1G01080 AT1G02150 POR AT1G04420 LIP2 emb2394 EMB2784 ALB-1V ABC1 AVDE1 CRB CLPP6 AT1G12800 AT1G13650 AT1G14270 AT1G14345 FUG1 AT1G18660 LHCA2*1 CVP1 AOR Cpn60beta4 CYP97A3 ACT1 PRPL11 GAPB AT1G44920 ACD1 AT1G49380 GDC1 AtTLP18.3 AT1G56500 ABC4 AT1G62780 AT1G65230 AT1G67700 CER6 PSRP3/1 AT1G74070 ATKAS2 emb2184 AtHMGR1 AT1G77090 AT2G03420 ALF1 LIP1 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 SCPL8 AT2G23390 YCF37 AT2G24060 HO2 ATCDPMEK AT2G27680 PY ATFC-II PRPL28 EDA3 AT2G35410 SKL2 ATSIG6 AT2G37660 ATMVD1 NTRC AT2G42130 AT2G43030 AT2G43560 FAB2 ACS1 AT2G44920 PHR2 DEG2 ATCYP38 ATF1 ATGSTF11 PDE326 EMB3119 AT3G06980 PTAC13 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 PGK1 AT3G12930 AT3G13120 FLU ESM1 AT3G15520 ADS3 MFP1 NDF4 EMB1865 AT3G23700 HCF101 ATGHBDH AT3G25805 LTA2 CCB1 ATSKL1 AT3G29185 RPL9 AT3G47650 ATG4 PSRP2 CP33 CYP97C1 AT3G54210 SBPASE AT3G56010 ACSF PIF5 AT3G59780 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 ATCCD1 TROL AT4G01310 AT4G02530 EMB3129 ATPC1 APX4 ATPD AT4G10300 CYP83A1 CYP97B3 AtCLA1 CLPR4 AT4G17560 LIL3:1 AT4G18030 CH-42 PGI AT4G24750 ACP4 CHLM NARA5 AT4G28080 PSB28 emb2726 FAD6 PGR3 ATH1 AtGLDP1 ATHDA14 AT4G34090 SEP1 CLB6 MRL1 HCF244 AtFBA2 AT4G39040 SQD2 SBE2.2 54CP ATLDA ATEGY2 AT5G08650 PMDH2 AT5G10690 PPD5 EMB3137 AT5G14460 ATDEF2 AT5G14910 PSY MEX1 PCB2 ATCPN21 CaS ARRPS1 AOS NDH18 ATFKBP13 CHL ADG1 ATPGMP AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 CLB4 DXR ATNDPK2 AT5G66470 NDHE
GO:0019288 isopentenyl diphosphate biosynthetic pro...	BP	1.674e-85	AT1G01080 AT1G02150 POR AT1G04420 LIP2 emb2394 EMB2784 ALB-1V ABC1 AVDE1 CRB CLPP6 AT1G12800 AT1G13650 AT1G14270 AT1G14345 FUG1 AT1G18660 LHCA2*1 CVP1 AOR Cpn60beta4 CYP97A3 ACT1 PRPL11 GAPB AT1G44920 ACD1 AT1G49380 GDC1 AtTLP18.3 AT1G56500 ABC4 AT1G62780 AT1G65230 AT1G67700 CER6 PSRP3/1 AT1G74070 ATKAS2 emb2184 AT1G77090 AT2G03420 ALF1 LIP1 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 SCPL8 AT2G23390 YCF37 AT2G24060 HO2 ATCDPMEK AT2G27680 PY ATFC-II PRPL28 EDA3 AT2G35410 SKL2 ATSIG6 AT2G37660 NTRC AT2G42130 AT2G43030 AT2G43560 FAB2 ACS1 AT2G44920 PHR2 DEG2 ATCYP38 ATF1 ATGSTF11 PDE326 EMB3119 AT3G06980 PTAC13 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 PGK1 AT3G12930 AT3G13120 FLU ESM1 AT3G15520 ADS3 MFP1 NDF4 EMB1865 AT3G23700 HCF101 ATGHBDH AT3G25805 LTA2 CCB1 ATSKL1 AT3G29185 RPL9 AT3G47650 ATG4 PSRP2 CP33 CYP97C1 AT3G54210 SBPASE AT3G56010 ACSF PIF5 AT3G59780 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 ATCCD1 TROL AT4G01310 AT4G02530 EMB3129 ATPC1 APX4 ATPD AT4G10300 CYP83A1 CYP97B3 AtCLA1 CLPR4 AT4G17560 LIL3:1 AT4G18030 CH-42 PGI AT4G24750 ACP4 CHLM NARA5 AT4G28080 PSB28 emb2726 FAD6 PGR3 ATH1 AtGLDP1 ATHDA14 AT4G34090 SEP1 CLB6 MRL1 HCF244 AtFBA2 AT4G39040 SQD2 SBE2.2 54CP ATLDA ATEGY2 AT5G08650 PMDH2 AT5G10690 PPD5 EMB3137 AT5G14460 ATDEF2 AT5G14910 PSY MEX1 PCB2 ATCPN21 CaS ARRPS1 AOS NDH18 ATFKBP13 CHL ADG1 ATPGMP AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 CLB4 DXR ATNDPK2 AT5G66470 NDHE
GO:0044085 cellular component biogenesis	BP	1.495e-84	AT1G02150 ATCSLD5 LPA1 FZL PSB27 POR ATHM1 AT1G04040 LIP2 AT1G04680 TOR2 AT1G05140 AT1G05150 emb2394 LPA19 UGT1 RHON1 OE23 PSAO ABC1 AVDE1 ATSYP111 AT1G09200 CRB AT1G09440 CLPP6 ATSRS AT1G12500 GAPA-2 AT1G14270 AT1G14345 CYCA2;3 NDF1 ATMYB58 HCF173 AT1G18360 NDF6 LHCA2*1 ARF5 TUB5 ATLFNR2 AT1G29070 ATSCAR3 AT1G29700 FEI1 PRK AT1G32470 PRPL11 RPL21C SKS6 PMI1 GAPB CP22 Lhca5 EMB3105 AT1G49380 AtCXE5 TUA2 AT1G50120 AT1G50660 GDC1 HTA10 AT1G52220 PSAH-2 ATBG1 TCP3 AtTLP18.3 AT1G54790 AT1G55260 ATDEK1 ATCSLE1 SVB CCB4 AT1G59860 ABC4 AtNIK3 ATFD2 AT1G60990 ATSCO1 AT1G64355 AT1G64500 AT1G64510 TUA1 Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication). 4CL3 cICDH AtMYB20 RBCS1A AT1G67700 PSBY ATHPR1 AT1G68110 CER6 FLN2 AT1G69420 HEMB1 AT1G70200 PG2 AT1G70550 AtCPB AT1G72230 LPA3 IQD31 NDH-O ATKAS2 emb2184 UMAMIT5 AtGH9B7 LQY1 ATCLV1 AtVAB1 AT1G76450 ATTPS1 PSBR AtkdsA1 ATNADP-ME4 AAA1 APG2 ATMAP65-6 STI RNE AT2G04280 FLA7 AT2G05920 OTP51 ATCLASP ATGLK1 PSB29 AtFBA1 CSI1 AT2G22230 IAA8 AT2G24060 AT2G25270 AT2G25430 AT2G25800 AT2G25830 OVA4 AT2G26500 KCS11 AT2G26730 AGO4 CH-CPN60A VHA-A1 HIS4 ALB3 ATEXP6 TUB7 ATVLN1 PBCP KIS PSBW FTSH2 TCP10 ARASP GALS1 ATRANGAP2 RWA3 AIR9 ATHB-14 GDCH AT2G35410 SKL2 FEI2 ATERF38 ATFTSZ2-1 AtXTH32 ABCB1 AT2G37660 AtAUX1 ATSCAR2 MAP65-5 PnsL1 LHCB4.3 ATVLN2 AT2G42510 ATMPK20 AT2G43030 BIO2 AT2G43560 AT2G43945 AFO AGP8 PLIM2a AT2G45990 PSAP AtTic20-II CRR6 ATCYP38 ATRGP1 ATN AT3G05910 RWA2 AT3G06980 SCPL27 AT3G08600 AT3G08680 LHCB4.2 PAL4 ABCI6 emb2738 AT3G12930 AT3G13120 AT3G13180 ATKRS-2 FLU MEE35 HCF243 PRPS20 AT3G15550 PSAH-1 AT3G16370 ATKINESIN-13A HCF107 AT3G17340 EMB1270 CBB1 PSBTN ATTSO1 PKP-ALPHA AT3G23090 KINESIN-12B AT3G23700 ATTOPII HCF101 PLSP1 GAUT8 AFH1 ATGHBDH AtCHUP1 LTA2 ATPRX GAPA CCB1 ATSKL1 GHS1 LHCB2 AT3G28460 AT3G29185 AT3G43610 LTPG2 RPL9 AtXTH31 AT3G45850 AT3G45930 PTAC16 AT3G47070 AT3G47650 GSA2 BAM2 OEC33 AT3G51140 ATG4 CP33 FTSZ2-2 HCEF1 LHCA1 PPL1 SBPASE AT3G56370 ACSF PrfB3 ATVLN3 AT3G59040 GUN4 AT3G60320 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. CDS5 AT3G60750 MAP65-4 GAUT1 AT3G61870 ATL5 CSP41A AtcpRRF EMB3126 TROL MGP4 ABC1 AT4G02530 AT4G02630 PSAD-1 PETC AT4G04340 EMB2369 ATPC1 PDF2 ATK5 Encodes a putative glycosyl hydrolase family 10 protein (xylanase). AT4G08280 APX4 ATPD LHCB5 PSAL AtENODL19 ATSAHH1 KINESIN-12A AT4G14360 APS3 TUA6 AFH3 PPD1 AT4G15830 SPK1 AT4G17560 LIL3:1 AT4G18030 CH-42 PTAC14 GALS3 PSBQ ATML1 PGR5-LIKE ARC1 CER2 AT4G24750 ATRBP31 ACP4 CHLM ATCNFU3 GDPDL3 MAP65-2 AT4G27435 PSB28 PSAE-1 ATPAO5 AT4G30020 VEL1 HCF153 ATCSLC05 PDE334 AtCESA1 LUG ATHB-8 ATH1 AT4G33760 SEP1 SSR16 AT4G34730 SLP2 HCF244 AT4G35320 XCP1 MCA1 BGAL3 AT4G36390 ACD2 NDH-M pde191 AtVAB2 AtFBA2 AT4G39040 VHA-A3 ATCESA2 SAMC1 LHCB4.1 AT5G01790 OHP ATMTRNASEII ATCSLA09 54CP ATCESA3 ATEGY2 NEDD1 TBR AT5G06970 AT5G08390 AT5G08650 PMDH2 CESA5 AT5G10020 AT5G10390 KAC1 AT5G10605 ATSPS2F AT5G11480 AtMYB3R4 ATNADP-ME2 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 DiT1 ATCYP20-2 CRN IQD11 EMB3136 CCS52B AT5G13980 EMB3137 GAUT14 BCCP AtMYB43 EMB2247 ENH1 ATSRA1 ATOBGC EMB40 PCB2 EMB3013 ADG2 ATOEP80 TUA3 TUA5 CRR42 AT5G22340 emb1211 H2B CaS HCF136 AT5G23750 TUB8 AT5G23910 ATSIG5 AT5G26330 AT5G27560 ARRPS1 AMOS1 atylmg3 ATPRFB RBCS3B AT5G38520 CRR7 ATUBC8 ATGLK2 TUB4 GALS2 AT5G46420 AT5G46580 Encodes the mitochondrial ATP synthase subunit delta. AT5G47190 FRA1 ADG1 LPA66 OVA2 ATGH9A1 AT5G50110 AT5G50180 OLD5 AT5G50420 AT5G51110 LPA2 EXL3 CRR1 CCB2 AT5G52780 AT5G52960 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. CcdA ATMAP65-1 AtIAMT1 GDPDL4 ATKCO1 NAP1;3 APO2 NPL1 NdhN AT5G58330 AT5G58520 AT5G58540 GIL1 AT5G59690 HTA6 AT5G59970 LecRK-I.9 COB TUB3 ALX8 JK218 EMB3144 CESA6 AT5G65220 AT5G65360 BAM1 ATLFNR1 AT5G66470 MSP-1 ICU2 IRX15-L PSBA PSBK PSBI ATPA ATPH PSBD PSBC YCF3 NDHJ NDHC YCF4 PETA PSBL PSBF PETG RPS18 PSBB PSBN PSBH PETB PETD YCF5 NDHI NDHA
GO:0006807 nitrogen compound metabolic process	BP	1.502e-83	LHY AtFKGP encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT1G01320 ASG4 AT1G01630 GAE2 AT1G02110 AT1G02150 AtSAM1 ATCSLD5 FZL PSB27 POR ATHM1 IAA3 AXR3 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase LIP2 ATGTF2H2 AT1G05150 emb2394 LPA19 UGT1 BT3 ATCTL1 ATMYB13 RHON1 HPD OE23 EMB2784 SR45a ATPCNA1 AT1G07440 GATA11 AXS2 ADT6 PSAO ALB-1V ABC1 AVDE1 AtMYB60 AT1G09310 CRB AtHIR1 ATBCAT-1 AT1G10120 ATGSTU18 ATGSTU17 ACLA-1 EMB3103 ATFD1 CBRLK1 CLPP6 ADT1 ATGLX1 AT1G11860 ATSRS ELP AT1G12244 PHR1 AT1G12800 AFB3 ICE2 GAPA-2 AT1G13730 PnsL2 SBH2 AT1G14345 AtMYB124 AT1G14460 AT1G14600 PSS1 AT1G15410 CYCA2;3 AT1G15710 CP24 FDM1 AT1G15920 NDF1 ADAP AT1G16080 ATMYB58 AT1G16680 FUG1 GLYR2 AT1G18060 BEE1 AT1G18440 AT1G18485 ATSOT17 AtMYB47 NDF6 LHCA2*1 BES1 AT1G19490 ATCLH1 BEL10 ARF5 ATLFNR2 CVP1 DRT112 AT1G21060 ATNADK2 AGL87 AT1G22630 FB AT1G22910 AOAT1 ATCAF2 AOR MLP423 UGT74B1 ASB1 BBX15 ATSOFL1 Cpn60beta4 AT1G26790 AtHB23 SPL11 AT1G27480 SRD2 AT1G29950 PDH-E1 ARF6 PSAK GlcNAc1pUT1 AK-HSDH PSAF ATROPGEF14 AT1G31710 CYP97A3 ACBP AT1G31920 PRK ATNSI ACT1 KAN2 NRT1.5 AT1G32470 PRPL11 AT1G33110 AT-GTL1 AT1G33470 AT1G33600 AT1G33700 EMB2756 AT1G35420 AT1G35560 RPL21C AT1G36280 SHM7 ATNR2 PMI1 expressed protein localized to the inner membrane of the chloroplast. GAPB ATSDC1 CYCA1;1 CP22 ATMCM2 ABF2 Lhca5 DYW1 ACD1 GATB AtPMEAMT AT1G49010 AT1G49380 FTSH1 AT1G50270 SCL-3 POLGAMMA2 GDC1 AT1G51080 AT1G51110 4CL.1 ADOF1 AT1G52220 PSAH-2 ATFPG-1 AT1G52510 SPA4 FTM6 TCP3 ATMUM4 AT1G54500 AtTLP18.3 AtIDD7 AT1G55260 AT1G55360 NDF5 PSAG ATCSLE1 ATSERAT2;1 HAC04 AT1G56050 AT1G56190 ATDI19 ATNAS4 AT1G56500 ATATP-PRT1 AtHEMA1 SQE1 CRR28 ARF1 AT1G60000 AT1G60590 ABC4 ATRECQ4B LHCA3 AT1G62250 ACO2 FMO AT1G62660 ATSCO1 AT1G62780 NRS/ER NRPD1 AT1G63640 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT1G64680 NDF2 RPOD1 AT1G65070 AT1G65230 ATPAO4 FMO cICDH GAD2 ZFP4 ATGSR2 AtMYB20 AT1G66430 EMB2814 AT1G67700 ATKCR1 PSBY CSK AT1G67950 ATHPR1 AtIDD14 AT1G68260 CER6 AT1G68810 ATSOFL2 PHYLLO BIM2 FLN2 AGO7 AtTCP15 HEMB1 CMT3 AT1G70000 SNL4 EMB25 AT1G70200 ATCYCD1;1 AT1G70280 AOAT2 ABCB26 MMZ2 CRR23 AT1G70770 AT1G71480 AT1G72270 AT1G72500 AT1G72810 LPA3 ATPIN1 AtEIL3 BBX16 SPPA AT1G74070 ATSOT18 ATSOT16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G74840 ATKAS2 emb2184 UMAMIT5 LQY1 AtVAB1 PETE1 AT1G76110 AT1G76120 CYCB2;4 AT1G76350 AT1G76450 AtHMGR1 AT1G76570 AT1G76880 ACR3 AT1G77090 AT1G77310 AT1G78010 AT1G78040 RAP2.4 ATGSTU20 ATSHB ATRHM1 ATGGH2 AT1G78995 PSBR APL AT1G80850 APG2 AT2G01210 MEE65 RPI2 RGA ARR14 AtIDD5 AT2G03390 AT2G03420 RNE EMB2761 AT2G05920 AtOPR3 AT2G07170 AT2G07689 AT2G13440 MCM9 AT2G14910 ATHNIR OTP51 MCM4 ADC1 AT2G17972 ATBZIP2 SCY1 HY3 ATHMA4 AT2G19940 AAS ATGLK1 ALF1 LIP1 AtERF53 PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 ATRL2 AT2G21960 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT2G22230 ATIPS2 AAT AGL22 IAA8 SCPL8 DEAR3 AT2G23360 NAPRT2 ATMES3 YCF37 BLH4 AT2G24060 PRPL35 PDE319 ALDH11A3 ATRPA2 AT2G24580 ESE2 AT2G25830 OVA4 AtGLDP2 ATHSFA2 AT2G26500 ATDUF3 HO2 AT2G26800 ATCDPMEK AGO4 LHW AT2G27290 ATNLP1 AT2G27680 ADT3 AT2G28200 DRB2 RAP2.7 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 ALB3 ADCS AT2G29180 PY ATVLN1 PBCP AT2G30320 ATFC-II PSBW CYP71A13 ATCOQ3 FTSH2 TCP10 ATERF15 BBX25 ATNTH1 AT2G31670 ATCOP1 ATSUVH2 AT2G33550 ATUBC24 ATHB-14 EDA3 GDCH AT2G35390 AT2G35410 SKL2 AT2G35640 ATERF38 AT2G35760 BLH1 ATE2FA AT2G36145 AT2G36200 AT2G36350 DML1 GAMMA-TIP MAT3 AT2G36950 ATSIG6 ATPAL1 UMAMIT13 AS1 AT2G37660 PDX1L4 ATPDX1.1 ATSCAR2 RDO2 NATA1 PnsL1 LHCB4.3 AT2G40260 AT2G40400 HEME2 ATKT2 ETG1 AT2G41130 SSL2 ARR8 NTRC ATVLN2 AGK1 AtSPL9 AT2G42220 ATBZIP34 AT2G42490 AT2G42510 AT2G42690 ATPAO2 AT2G43030 ATLEUD1 BIO2 AT2G43500 AT2G43560 FAB2 ACS1 AT2G43760 MTHFR2 BGLU26 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis KPHMT1 AT2G46250 SPA1 ARF11 AT2G46810 PSAP PIL1 SPL1 ATDUF5 CAO ATMYB12 PHR2 CRR6 AtCGS1 ATCFM2 ATHB-1 ATCYP38 ATBCA1 AK3 ATRGP1 RAD23-3 ATF1 AT3G02820 ATGSTF11 PDE326 ATMS2 IAA16 EMB3119 ATCYSD1 RALFL22 AIF1 AT3G06410 GATA15 AT3G06980 AT3G07270 AT3G08030 LHCB4.2 AT3G09050 ATHY2 PTAC13 AT3G09580 CRM3 ADK1 PIP5K9 OMR1 GYRB1 PAL4 SPD1 ABCI6 AT3G10840 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 emb2738 AT3G12210 PGK1 AT3G12930 AT3G13000 AT3G13040 ATSERAT2;2 AT3G13120 AT3G13180 AT3G13226 ATKRS-2 AT3G13510 PUT4 AT3G13740 AT3G14067 FLU ESM1 ATPME3 AT3G14330 ATRHM3 AT3G14890 HEME1 IDM1 MEE35 PRPS20 SPL5 ATHM4 AT3G15520 AT3G15550 ADS3 MFP1 PSAH-1 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT3G16350 JAL35 ATEBP HCF107 ECT6 POK1 MAT4 ATCRSH HYH ATACP5 NMT1 WOX1 NRPD2B EMB1865 AT3G18870 AtTic62 AT3G19480 BCAT4 CBB1 AT3G20230 POLGAMMA1 AT3G20680 PSBTN AtBBX32 GluTRBP ADOF2 AT3G22150 AT3G22520 ATTSO1 ELIP APS1 ATCFM3A bHLH34 AT3G23700 ATSAHH2 GAE6 ATTOPII HCF101 AT-HSFC1 PLSP1 ICK3 ATGHBDH AT3G25570 AtCHUP1 LTA2 RPL15 ATPRX AT3G26450 GAMMA-TIP2 GAPA ATSNM1 CCB1 ATICE1 ATSKL1 DRB3 ATTSO2 LHCB2 AT3G28460 ATCM1 AT3G42660 CHR38 ATGSTU27 ATNIT1 JK224 AT3G45900 ATMYB48 PTAC16 DUT1 AT3G47070 PEX11B ATSMC2 CAB4 PYE AT3G47650 AT3G47830 ATATM AT3G48200 AT3G48420 AHAS GSA2 AT3G49000 ATBCAT-3 OBP1 ICK2 BEH1 OEC33 AtHB28 SRS1 GATA6 AT3G51140 GMD2 AT3G51280 ATSSL4 ATG4 AT3G51950 AT3G52500 FTSZ2-2 KIPK CYP97C1 ATPAL2 AtPIP2;1 AT3G53680 PYRR HCEF1 ATPTR1 AT3G54390 AT3G54400 ATGR2 LHCA1 PPL1 ATTSC13 OVA1 P5CS2 ATDFD SBPASE ESK1 AT3G56010 AT3G56290 AT3G56680 AT3G56870 ACSF AT3G57020 AT3G57030 AT3G57060 BPG2 PrfB3 AGL16 AT3G57800 SPL15 GIS ATWRKY69 IPMI1 AT3G59040 PIF5 GUN4 AT3G59780 MTHFR1 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. HAT3 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT3G60750 MAP65-4 AT3G61080 HD-GL2-1 ARATH;BSAS3;1 ATX3 AT3G61870 CYP20-3 ATMYB11 APG3 ATIPT3 CSP41A OEP6 AtcpRRF OTP86 EMB3126 AT3G63510 ATCCD1 BRCA2(IV) UNE10 YAB3 ANTR2 FDM2 AT4G00560 AT4G00870 AT4G00895 MEE47 TROL AT4G01310 AT4G01460 ABC1 HEMG1 AtSAM2 MCM7 AT-RSH1 AT4G02530 EOL1 PSAD-1 EMB3129 AtRBP-DR1 AFB1 PETC EMB2369 APR ATPC1 PDF2 AtMYB74 ATK5 ARGAH2 APX4 AT4G09040 AT4G09630 ATPD AT4G10060 ATDET1 LHCB5 AT4G11100 SPA2 AT4G11175 ATMPK5 AT4G11570 PSAL AT4G12830 EPFL9 CYP83A1 SHM4 ATSAHH1 KINESIN-12A AT4G14330 bHLH104 NF-YB3 CIPK4 ELIP2 ATTCX2 ATCCT2 AT4G15430 IAGLU AtCLA1 AT4G16141 PHYD AT4G17560 LIL3:1 AT4G17810 MYC4 APRR2 PHYE DEG5 TCP2 CH-42 AT4G18740 AT4G18810 AT4G18820 CMT2 Encodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death. AK-HSDH AAH PTAC14 PyrD PSBQ ATM4 ATML1 AT4G21770 PRXR1 ATSMO1-2 PGR5-LIKE AT4G23670 CRF2 AT4G24350 CER2 AGL24 TAR2 AT4G24750 ATRBP31 AT4G24790 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) ACP4 CHLM MSRA4 OTP70 AT4G25280 AT4G25290 CGA1 AtFBA7 AtFBA5 AtWRKY20 MAP65-2 ATK2 AT4G27240 CIP7 NARA5 AT4G28080 AT4G28740 PSAE-1 AT4G28780 emb2726 IAA27 AT4G29100 AT4G29120 AT4G30180 AHA2 GAE1 SARK GGP1 FAD6 ACDO1 PGR3 PDE334 LUG ATSDX1 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHB-8 ATH1 AtGLDP1 ATHDA14 AtHMAC6 KUP5 AT4G33740 AT4G33760 CCoAOMT1 AT4G34090 SEP1 BLH6 SSR16 ERG9 AT4G34730 ASE2 MRL1 SLP2 AtMYB32 HCF244 AT4G35270 MCA1 AT4G36180 GATA7 BGAL3 AT4G36390 BEE2 ATRL3 AtPLT6 BLH2 ACD2 CYP81F3 ANT SHM1 pde191 AQI AtVAB2 ATMYB4 ROC1 ATPRP4 AtFBA2 AT4G39040 VHA-A3 ATSEC14 SAMC1 ATSK2 AT4G39630 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. ATIPS1 AKN2 CYP79B2 DHS1 AT5G01020 AT5G01090 SQD2 ATPDX1 AIRP2 LHCB4.1 AT5G02160 ATMTRNASEII AT5G02370 AT5G02460 AT5G02710 ATRAB AtNCS1 SBE2.2 54CP GYRB2 ATPAL3 ATLDA BTR1 SIR ATOFP13 NOL ATNAS1 AT5G05180 AT5G05790 UGT76C2 2-Cys HAT14 AT5G07020 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ATMYB29 AT5G08050 TCP17 BIM1 ATAIH FTRA2 AT5G08430 PDE340 AT5G08650 AtSRT2 AtPPa6 PMDH2 AST68 ASN3 PAS2 AIL6 AT5G10605 AT5G10690 AT5G10960 AT5G10970 HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 TINY2 ATNADP-ME2 TUB6 DiT1 AT5G12970 ATGSL12 ATCYP20-2 AT5G13140 EMB3136 ABAR SVR3 SIG4 CCS52B AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 EMB3137 AT5G14460 AT5G14500 AO AT5G14910 AT5G14970 GASA4 AT5G15390 AtbZIP3 AT5G15950 VAT1 AtMYB43 EMB2247 ENH1 PSY MEX1 AT5G17660 ATCIMS anac088 ATSRA1 AT5G18550 ATOBGC PCB2 NSH3 BUD2 ADG2 AT5G19290 AT5G19940 ATMGD2 ATCPN21 CRR42 AT5G21100 AT5G21105 ATCKX5 ATHMA8 AT5G22020 anac089 AT5G22340 IMS3 CaS HCF136 AT5G23280 HMGB6 AT5G23480 AT5G23820 SLAH3 ATSIG5 PGL5 LSU2 CRY3 AT5G25590 PYR6 ATCYSD2 DES1 AT5G28300 AT5G28500 GME ARRPS1 AT5G34930 AT5G35170 ATGSL1 AHK2 AT5G35970 atylmg3 AT5G36160 ATPRFB CAT3 AT5G37010 ARF8 ARLA1A AT5G38520 CRR7 UDG4 ORTH1 DRB5 ATUBC8 AT5G41760 AT5G42070 FTSH5 AOS AT5G43150 SPL2 TZP AT5G44020 ATGLK2 AT5G44520 MCM6 ATFKBP13 AT5G45720 CHL AtNUDT11 APE2 AtLARP6a AT5G46390 AT5G46420 AT5G46580 bHLH071 TET1 PYL1 ATNIG1 AT5G46910 Encodes the mitochondrial ATP synthase subunit delta. AT5G47190 AT5G47390 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT5G47620 NF-YB2 FPS1 FRA1 AMK2 AT5G48220 ADG1 AT5G48360 HINT3 ATCAP-C LPA66 OVA2 DDM2 ATMYB111 ATGH9A1 ATPPOX AT5G50000 AT5G50110 OLD5 AT5G50370 AT5G51110 AT5G51140 LPA2 At-NEET ATPGMP AT5G52010 CRR1 SCL8 AT5G52660 AT5G52780 ATWRKY27 AT5G52960 AT5G52970 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 ATOMT1 PTAC15 THI1 AT5G55220 ATMAP65-1 CRR21 AT5G56840 AT5G56850 GATA21 NAP1;3 CIA2 AHA3 BIO1 ADCL APO2 NPL1 NdhN AT5G58330 EOL2 DDB2 ATUXS3 AtVIP2 ARF4 ATPDX2 CLB4 ATMYB34 PNM1 PDCB1 PIF7 AtMYB28 AtTudor2 ARF1-BP CDF1 AHA11 DXR AT5G62840 BT1 ATNDPK2 AT5G63700 SHA1 ALX8 PSAN DCT ATGCH EMB3144 ASN2 AT5G65220 ATHB-5 KAC2 STR16 ATLFNR1 AT5G66470 AT5G66520 MSP-1 ENY AT5G66770 ICU2 TOE3 AT5G67200 PSBA MATK RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBF PSBE ORF31 PETG PSAJ RPS18 RPL20 CLPP1 PSBB PSBT PSBN PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 NDHB.1 NDHF YCF5 NDHD NDHE NDHG NDHI NDHA RPS15 NDHB.2 RPL2.2 ATP6 NAD5
GO:0006996 organelle organization	BP	2.535e-82	AT1G02110 AT1G02150 AtSAM1 ATCSLD5 LPA1 FZL PSB27 POR ATHM1 ABCC5 TOR2 AT1G05150 emb2394 UGT1 ATCTL1 BBX24 RHON1 OE23 ATPCNA1 PSAO ABC1 ATSYP111 AT1G09200 CRB CLPP6 AT1G11860 ATSRS ATBETAFRUCT4 AT1G12800 GAPA-2 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. ADL1C ATMAP70-4 CYCA2;3 CP24 AT1G16080 UP6 FUG1 AT1G18060 ARF5 TUB5 ATLFNR2 ARAC4 DRT112 MCD1 AT1G21350 LYM1 AT1G26190 MAP65-8 ATSCAR3 ACBP PRK AtLrgB AT1G32470 PRPL11 RPL21C ACC1 PMI1 GAPB AT1G44000 CYCA1;1 CP22 ATMCM2 AT1G44920 Lhca5 ACT8 AT1G49380 AT1G50270 AT1G50660 POLGAMMA2 GDC1 HTA10 AT1G51110 AT1G51200 ATB AT1G52220 PSAH-2 ATROPGEF11 ATBG1 ATFPG-1 TCP3 mMDH1 ATMPK18 ATATG18H AtTLP18.3 ANP2 ATDEK1 UKL3 AT1G56210 AT1G56500 ARF1 AtNIK3 ACO2 AT1G62660 ATSCO1 AT1G62780 AT1G63010 NRPD1 AT1G63640 AT1G64500 AT1G64510 TUA1 Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication). AT1G65230 PTAC4 AtRLP10 cICDH ATGSR2 PMI2 CRWN1 EMB2814 AT1G67700 PSBY ATHPR1 AT1G68110 CER6 PSRP3/1 FLN2 AT1G69420 CMT3 AT1G70200 AtCPB AT1G72270 AT1G73110 IQD31 emb2184 LQY1 AtVAB1 AT1G76110 CYCB2;4 AT1G76450 AtHMGR1 AT1G77310 TAPX EMB1047 ATNADP-ME4 CS17 AT1G80030 AAA1 APG2 AT2G01210 RGA ATMAP65-6 AtIDD5 STI RNE AT2G04280 ENR1 AT2G07170 AT2G11910 MCM4 ARAC1 SCY1 HY3 ATCLASP ATGLK1 PSB29 PDTPI ATSULA AtFBA1 IAA8 AT2G23360 YCF37 ALDH11A3 ATRPA2 AT2G25270 AT2G25430 OVA4 AT2G26500 WEB1 KCS11 AT2G26730 SCAB1 AGO4 LHW AT2G27680 CH-CPN60A AT2G28620 HIS4 ALB3 ATEXP6 TUB7 ATVLN1 PBCP PSBW FTSH2 TCP10 ARASP ATSUVH2 ATRANGAP2 AIR9 ATHB-14 EDA3 GDCH AT2G35410 BLH1 AT2G36200 ATFTSZ2-1 AT2G36350 DML1 GAMMA-TIP MAT3 ABCB1 ATSIG6 AtAUX1 PSRP4 ATSCAR2 RDO2 MAP65-5 PIP2;6 CYT1 ETG1 AT2G41050 NTRC ATVLN2 AT2G42130 BIO2 AT2G43560 FAB2 AT2G44870 AFO ATPEX16 PEX11D PLIM2a AT2G45870 ATHH2 SPA1 PSAP DEG2 ATCYP38 AT3G02250 ATCOL2 SDG31 ATN AT3G05470 AT3G06980 AT3G07540 SCPL27 AT3G08680 AT3G09050 PTAC13 AT3G09730 OMR1 GYRB1 ABCI6 emb2738 ACT11 PGK1 AT3G13120 AT3G13180 AT3G13226 Cpn60beta2 ATKRS-2 AT3G13510 IDM1 MEE35 ATHM4 AT3G15550 MFP1 PSAH-1 AQP1 JAL35 ATKINESIN-13A AT3G16850 HCF107 POK1 EMB1270 PEX3-1 EMB1865 ACT2 ATPREP1 ARC6H QWRF1 ARC5 POLGAMMA1 PSBTN AT3G22520 ATTSO1 NET1A APS1 KINESIN-12B AT3G23700 ATSAHH2 ATTOPII HCF101 PLSP1 AFH1 ATGHBDH AtCHUP1 LTA2 GAMMA-TIP2 GAPA CCB1 ATICE1 ATSKL1 AT3G28460 AT3G29185 AT3G42660 AT3G43610 JK224 AT3G45850 AT3G45930 PTAC16 AT3G47070 PEX11B ATSMC2 AT3G47650 ATATM AT3G48200 AT3G48420 OEC33 AT3G51140 AT3G51280 ATSSL4 AT3G51720 ATG4 AT3G52110 CP33 FTSZ2-2 AtPIP2;1 ACT3 HCEF1 ATGR2 PDE329 PPL1 ATTSC13 SBPASE AT3G56290 PPD6 AT3G56870 PSRP5 ACSF AT3G57060 PrfB3 ATVLN3 AT3G59040 ACR4 AT3G60320 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. AT3G60750 MAP65-4 ATPIP1 ARATH;BSAS3;1 AT3G61870 APG3 ATIPT3 CSP41A AtcpRRF EMB3126 BRCA2(IV) TROL AT4G01790 AGY1 MCM7 AT4G02530 PSAD-1 EMB3129 PETC EMB2369 ATPC1 PDF2 ATK5 ATPD AT4G11175 FLA2 PSAL AtENODL19 SDG22 ATSAHH1 EDA38 KINESIN-12A AT4G14330 TUA6 AFH3 AT4G15830 SPK1 AT4G16490 ATG2484-1 LIL3:1 AT4G17810 PHYE TCP2 AT4G19410 PTAC14 PSBQ ATML1 PGR5-LIKE PIP1;5 ARC1 cpHsc70-1 AT4G24750 ACP4 ATCNFU3 AT4G26555 AT4G26710 MAP65-2 ATK2 NARA5 AT4G28740 PSAE-1 emb2726 ATPAO5 AT4G30020 ATVLN4 VEL1 ASHR3 EMB2797 PGR3 PDE334 AtCESA1 LUG ATHB-8 ATH1 FAB1A ATHDA14 AT4G33760 SEP1 ATCAP1 SSR16 AT4G34730 ASE2 MRL1 SLP2 MCA1 ARAC6 AT4G36180 AT4G36390 ANT pde191 AtVAB2 AtFBA2 VHA-A3 SHL1 SAMC1 AT4G39630 ATMTRNASEII AT5G02370 AT5G02710 ATCSLA09 GYRB2 FD-GOGAT SIR ATCESA3 ATEGY2 NEDD1 2-Cys AT5G06970 AT5G07020 AT5G08050 AT5G08390 AT5G08430 AT5G08650 PMDH2 AT5G10020 AT5G10390 KAC1 AT5G10960 HY5 PPD5 AT5G11480 AtMYB3R4 ATNADP-ME2 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 ATGSL12 CRN EMB3136 AT5G13770 CCS52B AT5G13980 ATDEF2 AT5G15070 APG6 VAT1 DHAR3 EMB2247 ENH1 ATSRA1 ATOBGC EMB40 ADG2 AT5G19290 ATOEP80 AT5G20700 ATCPN21 emb1211 H2B CaS HCF136 AT5G23480 EFO2 TUB8 AT5G23910 ATSIG5 LSU2 AT5G25590 ARRPS1 AMOS1 ATGSL1 atylmg3 ATPRFB AT5G37010 ARLA1A PMI15 AT5G38520 ORTH1 DEG8 TZP NDH18 ATGLK2 TUB4 MCM6 KAS1 Encodes the mitochondrial ATP synthase subunit delta. LON2 AT5G47190 FPS1 ADG1 AT5G48360 ATCAP-C LPA66 OVA2 DDM2 ATGH9A1 AT5G50180 AT5G50420 CAA33 AT5G51110 LPA2 EXL3 HCF106 AT5G52970 PDV1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. PTAC15 RPL24 AT5G55220 ATMAP65-1 GDPDL4 ATKCO1 ATPEX5 NAP1;3 BIO1 NPL1 AT5G58160 AT5G58330 GIL1 AT5G59690 HTA6 AT5G59970 CLB4 COB VIP4 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AML1 AT5G62350 CDF1 ATPEX14 AT5G63700 ALX8 EMB3144 CESA6 AT5G65220 AT5G65360 KAC2 BAM1 ATLFNR1 AT5G66470 MSP-1 ICU2 AT5G67200 ATEB1C
GO:0006732 coenzyme metabolic process	BP	3.647e-79	PIP1;3 AtSAM1 POR ATHM1 LIP2 TOR2 emb2394 LPA19 HPD AT1G07440 PSAO ABC1 AVDE1 ATSYP111 CRB ATGSTU18 ACLA-1 ATFD1 AT1G12080 AT1G12800 PnsL2 AT1G14345 NDF1 AT1G16080 SPS2 GLYR2 AT1G18060 NDF6 AT1G19140 LHCA2*1 ATLFNR2 CVP1 DRT112 ATNADK2 AT1G22630 AOR PDH-E1 AAE14 PRK ATNSI AT1G32470 EMB3003 GAPB ATMCM2 AtBGAL5 FTSH1 GDC1 AT1G51110 PSAG DHNS ABC4 ACLA-2 KAS ATSCO1 AT1G62780 NDF2 AT1G65230 cICDH CER6 PHYLLO HEMB1 CRR23 AT1G70770 IQD31 ATKAS2 emb2184 AtGH9B7 LQY1 AT1G76450 AtHMGR1 AT1G77090 LAX3 SPS1 ATGGH2 RPI2 FLA7 ENR1 AtXYP2 AGP9 ALF1 LIP1 ATSULA AtFBA1 AT2G21960 AT2G22230 SCPL8 NAPRT2 YCF37 PRPL35 AT2G24580 KCS11 AT2G26730 AT2G27680 ADCS PY EMB3147 ATFC-II ATCOQ3 FTSH2 AT2G34590 EDA3 GDCH SKL2 AT2G36145 MAT3 CAC3 PDX1L4 ATPDX1.1 ATMVD1 BIO2 AT2G43560 FAB2 ACS1 AT2G43760 AT2G44920 KPHMT1 PSAP ATCYP38 ATBCA1 ATF1 ATGSTF11 EMB3119 ACLB-1 AT3G07270 AT3G08680 SPD1 ATHST PGK1 FLU ESM1 ATHM4 MFP1 NDF4 LPD1 MAT4 CBB1 AT3G23700 HCF101 ATGHBDH LTA2 ATSKL1 PTAC16 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 ELL1 HCEF1 PPL1 ATDFD SBPASE AT3G56010 AT3G59040 PIF5 GUN4 AT3G59780 AT3G61870 CYP20-3 CSP41A AtcpRRF APG1 EMB3126 ATCCD1 ANTR2 TROL AtSAM2 AT4G02530 PETC ATPC1 ATK5 APX4 ATPD FLA2 CYP83A1 AtCLA1 SPK1 LIL3:1 ATSMO1-2 PGR5-LIKE AtFBA7 AtFBA5 AT4G26860 AT4G28740 AT4G29120 FAD6 PGR3 PDE334 ATH1 AtGLDP1 ATHDA14 AT4G34090 SEP1 ERG9 ACD2 AtVAB2 AtFBA2 ATPDX1 SBE2.2 ATLDA 2-Cys AT5G08050 FTRA2 AT5G08415 AT5G08650 PMDH2 ATNADP-ME2 TUB6 SIG4 AO AT5G14910 AtENODL17 BCCP LRR1 ENH1 MEX1 PCB2 ADG2 CaS HCF136 PGL5 ARRPS1 CAC2 ATGSL1 atylmg3 FTSH5 AOS AT5G44520 AtNUDT11 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. FPS1 AACT2 ADG1 ACLB-2 AT5G50000 OLD5 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 AT5G56040 ADCL NdhN AtcPT4 CLB4 AtTudor2 DXR PSAN ATLFNR1 NDHE
GO:0008654 phospholipid biosynthetic process	BP	8.888e-78	AT1G01080 ATGPAT4 AT1G02150 POR AT1G04420 LIP2 emb2394 EMB2784 ALB-1V ABC1 AVDE1 CRB CLPP6 AT1G12800 AT1G13650 AT1G14270 AT1G14345 PSS1 FUG1 AT1G18660 LHCA2*1 CVP1 AOR Cpn60beta4 CYP97A3 ACT1 PRPL11 GAPB AT1G44920 ACD1 AtPMEAMT AT1G49380 GDC1 AtTLP18.3 AT1G56500 ABC4 AT1G62780 AT1G65230 AT1G67700 CER6 PSRP3/1 AT1G74070 ATKAS2 emb2184 AtHMGR1 AT1G77090 AT2G03420 ALF1 LIP1 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 ATIPS2 SCPL8 AT2G23390 YCF37 AT2G24060 HO2 ATCDPMEK AT2G27290 AT2G27680 PY ATFC-II PRPL28 EDA3 AT2G35410 SKL2 ATSIG6 AT2G37660 ATMVD1 NTRC AT2G42130 AT2G43030 AT2G43560 FAB2 ACS1 AT2G44920 PHR2 DEG2 ATCYP38 ATF1 ATGSTF11 PDE326 EMB3119 AT3G06980 PTAC13 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 PGK1 AT3G12930 AT3G13120 FLU ESM1 AT3G15520 ADS3 MFP1 NDF4 NMT1 EMB1865 GLTP3 AT3G23700 HCF101 ATGHBDH AAPT2 AT3G25660 AT3G25805 LTA2 CCB1 ATSKL1 AT3G29185 RPL9 AT3G47650 ARLA1C ATG4 PSRP2 CP33 CYP97C1 AT3G54210 AT3G54290 PGPS2 SBPASE AT3G56010 ACSF PIF5 AT3G59780 CDS5 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 ATCCD1 AtGPAT8 TROL AT4G01310 ATGPAT3 AT4G02530 EMB3129 ATPC1 APX4 ATPD AT4G10300 CYP83A1 CYP97B3 ATCCT2 AtCLA1 CLPR4 AT4G17560 LIL3:1 AT4G17740 AT4G18030 CH-42 PTAC14 PGI AT4G24750 ACP4 CHLM AT4G26710 NARA5 AT4G28080 PSB28 emb2726 FAD6 HCF153 PGR3 ATH1 AtGLDP1 ATHDA14 AT4G34090 SEP1 CLB6 MRL1 AT4G34920 HCF244 MCA1 AT4G36390 AtFBA2 AT4G39040 ATSEC14 ATIPS1 SQD2 SBE2.2 54CP ATLDA ATEGY2 AT5G08650 PI-4KBETA2 PMDH2 ATMIPS3 AT5G10690 PPD5 EMB3137 AT5G14410 AT5G14460 ATDEF2 AT5G14910 PSY MEX1 PCB2 ATCPN21 CaS ARRPS1 AT5G40500 AOS NDH18 ATFKBP13 CHL FPS1 ADG1 ATPGMP AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. RPL24 AT5G55220 PSD2 FOLK CLB4 DXR ATNDPK2 AT5G66470 NDHE
GO:0006644 phospholipid metabolic process	BP	1.102e-76	AT1G01080 ATGPAT4 AT1G02150 POR AT1G04420 LIP2 emb2394 5PTASE13 EMB2784 ALB-1V ABC1 AVDE1 CRB AT1G10900 CLPP6 AT1G12800 AT1G13650 AT1G14270 AT1G14345 PSS1 FUG1 AT1G18660 LHCA2*1 CVP1 ATPIP5K1 AOR Cpn60beta4 IMPL1 CYP97A3 ACT1 PRPL11 GAPB AT1G44920 5PTASE11 ACD1 AtPMEAMT AT1G49380 GDC1 AtTLP18.3 AT1G56500 ABC4 AT1G62780 AT1G65230 AT1G67700 CER6 PSRP3/1 AT1G71710 AT1G74070 ATKAS2 emb2184 AtHMGR1 AT1G77090 PIP5K2 AT2G03420 ALF1 LIP1 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 ATIPS2 SCPL8 AT2G23390 YCF37 AT2G24060 HO2 ATCDPMEK AT2G27290 AT2G27680 PY ATFC-II PRPL28 EDA3 AT2G35410 SKL2 ATSIG6 AT2G37660 ATMVD1 NTRC AT2G42130 AT2G43030 AT2G43560 FAB2 ACS1 5PTase12 AT2G44920 AT2G44970 PHR2 DEG2 ATCYP38 ATF1 ATGSTF11 PDE326 EMB3119 AT3G06980 PTAC13 PIP5K9 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 PGK1 AT3G12930 AT3G13120 FLU ESM1 AT3G15520 ADS3 MFP1 NDF4 NMT1 EMB1865 GLTP3 AT3G23700 HCF101 ATGHBDH AAPT2 AT3G25660 AT3G25805 LTA2 CCB1 ATSKL1 AT3G29185 RPL9 AT3G47650 ARLA1C ATG4 PSRP2 CP33 CYP97C1 AT3G54210 AT3G54290 PLA PGPS2 SBPASE AT3G56010 ACSF PIF5 AT3G59780 CDS5 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 ATCCD1 AtGPAT8 TROL AT4G01310 ATGPAT3 AT4G02530 EMB3129 ATPC1 AT4G05090 APX4 ATPD AT4G10300 CYP83A1 CYP97B3 ATCCT2 AtCLA1 CLPR4 AT4G17560 LIL3:1 AT4G17740 AT4G18030 CH-42 PTAC14 PGI AT4G24750 ACP4 CHLM AT4G26710 FAD4 NARA5 AT4G28080 PSB28 emb2726 FAD6 HCF153 PGR3 ATH1 AtGLDP1 FAB1A ATHDA14 AT4G34090 SEP1 CLB6 MRL1 AT4G34920 HCF244 MCA1 AT4G36390 AtFBA2 AT4G39040 ATSEC14 ATIPS1 SQD2 SBE2.2 54CP ATLDA AT5G04980 ATEGY2 AT5G08650 PI-4KBETA2 PMDH2 ATMIPS3 AT5G10690 PPD5 EMB3137 AT5G14410 AT5G14460 ATDEF2 AT5G14910 PSY MEX1 AT5G17670 PCB2 ATCPN21 CaS ARRPS1 AT5G40500 AOS NDH18 ATFKBP13 CHL FPS1 ADG1 ATPGMP AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AHL RPL24 AT5G55220 PSD2 FOLK CLB4 DXR ATNDPK2 AT5G66470 NDHE
GO:0016053 organic acid biosynthetic process	BP	5.053e-75	KCS1 AT1G01630 AtSAM1 POR KCS2 LIP2 AT1G05150 ATCTL1 OE23 EMB2784 KCS3 ADT6 PSAO FATB AVDE1 AT1G09310 CRB AtHIR1 ACLA-1 ATFD1 CLPP6 ADT1 ATGLX1 AT1G11860 ATSRS ELP AT1G12800 AFB3 AOC4 SBH2 PSS1 AT1G15710 CP24 ADAP ATSOT17 KCS4 JMT ATLFNR2 DRT112 AOAT1 AOR UGT74B1 ASB1 CER60 PDH-E1 PSAK AK-HSDH PSAF ATROPGEF14 AT1G31710 CYP97A3 ACBP PRK ACT1 PKp3 AT1G32470 AT1G33110 AT1G35420 ACC1 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 LACS2 AT1G51110 PSAH-2 ACP2 AtTLP18.3 ATLOX1 AT1G55260 AT1G55360 PSAG ATSERAT2;1 AT1G56190 ATNAS4 ATATP-PRT1 AT1G60000 LHCA3 ACO2 FMO KAS LACS3 BDG1 ATGSR2 AT1G66430 DIN9 ATLOX6 ATKCR1 PSBY AT1G67950 ATHPR1 AT1G68260 CER6 AT1G70280 AOAT2 JAZ9 AT1G72500 AT1G72810 LPA3 ATSOT18 ATSOT16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATKAS2 PETE1 ACR3 LACS9 AT1G78040 ATGSTU20 PSBR AtkdsA1 ATNADP-ME4 LACS8 AT2G05920 ENR1 AtOPR3 ATHNIR KCS9 AT2G19940 ALF1 LIP1 PDTPI AtFBA1 PLAT2 AT2G22230 AAT SCPL8 ATMES3 AT2G24060 ALDH11A3 AT2G25830 FDH ATDUF3 KCS11 AT2G27680 ADT3 ADCS ANTR1 AtFAD3 CYP71A13 ATCOQ3 AT2G31670 ATFAH1 GDCH SKL2 ATCSLA07 BLH1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 CAC3 PIP2;6 PnsL1 RCA CYT1 ATKT2 AT2G42220 AT2G42690 ATLEUD1 BIO2 FAB2 ACS1 BGLU26 CHL-CPN10 AT2G44920 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis ATPEX16 AtSLD2 CER8 CAO CRR6 AtCGS1 ATCYP38 ATBCA1 AK3 ATMS2 EMB3119 ATCYSD1 AT3G07270 LHCB4.2 ADK1 OMR1 ABCI6 AtFAD7 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 PGK1 AT3G12930 ATSERAT2;2 FLU ATPME3 HEME1 ATHM4 ADS3 JAL35 ECT6 AT3G19480 BCAT4 CBB1 ADOF2 AT3G22520 APS1 ATSAHH2 GAE6 ATGHBDH AOC1 AOC2 LTA2 ATPRX AT3G26450 GAMMA-TIP2 ATSKL1 ATCM1 AAO2 ATNIT1 CAB4 AHAS GSA2 AT3G51140 ATG4 FTSZ2-2 CYP97C1 AtPIP2;1 AT3G54400 P5CS2 ATDFD SBPASE ACSF IPMI1 PIF5 GUN4 AT3G60750 ARATH;BSAS3;1 AtSLD1 CYP20-3 AtcpRRF EMB3126 ATCCD1 TROL AT4G01310 AT4G02530 EOL1 PSAD-1 PETC APR ATPC1 AtMYB74 ATPD LHCB5 AT4G10390 AT4G13050 CYP83A1 AtCLA1 CH-42 AK-HSDH ATFAH2 PRXR1 ATSMO1-2 AT4G23670 CER2 ATHB22 TAR2 ATRBP31 ACP4 B1 VTC2 FAD4 ATK2 PSAE-1 GGP1 FAD6 EMB2797 PDE334 AT4G32590 ATH1 AtGLDP1 KUP5 AT4G33740 ATOST1 CCoAOMT1 SLP2 MCA1 AT4G36390 AtPLT6 SHM1 AQI ROC1 ATPRP4 AtFBA2 AT4G39040 ATSK2 ATIPS1 AKN2 CYP79B2 DHS1 AT5G01020 AT5G01090 SQD2 FD-GOGAT KCS19 SIR ATNAS1 AtFAD8 2-Cys ERL2 FTRA2 AT5G08415 AT5G08430 AtPPa6 PMDH2 AST68 ASN3 PAS2 TUB6 AT5G12970 ATCYP20-2 AT5G13140 AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 AT5G14500 BETA GASA4 BCCP2 AT5G16240 VAT1 BCCP PSY ATCIMS PCB2 AT5G19940 ATCPN21 AT5G22340 IMS3 CaS ATCYSD2 DES1 GME AT5G34930 CAC2 ATGSL1 AT5G36160 CAT3 UDG4 AT5G41760 AOS KCS20 AT5G44020 ATFKBP13 APE2 KAS1 AT5G46580 TET1 PYL1 FRA1 ATGH9A1 AT5G50000 AT5G51110 AT5G51140 CRR1 B2 AT5G52960 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G53750 VTC5 ATMAP65-1 BIO1 ADCL APO2 CLB4 ATMYB34 PDCB1 AtTudor2 AT5G62210 DXR Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. ALX8 PSAN ASN2 STR16 ATLFNR1 MSP-1 ABA1 EPS1 ACCD NDHE
GO:0046394 carboxylic acid biosynthetic process	BP	5.053e-75	KCS1 AT1G01630 AtSAM1 POR KCS2 LIP2 AT1G05150 ATCTL1 OE23 EMB2784 KCS3 ADT6 PSAO FATB AVDE1 AT1G09310 CRB AtHIR1 ACLA-1 ATFD1 CLPP6 ADT1 ATGLX1 AT1G11860 ATSRS ELP AT1G12800 AFB3 AOC4 SBH2 PSS1 AT1G15710 CP24 ADAP ATSOT17 KCS4 JMT ATLFNR2 DRT112 AOAT1 AOR UGT74B1 ASB1 CER60 PDH-E1 PSAK AK-HSDH PSAF ATROPGEF14 AT1G31710 CYP97A3 ACBP PRK ACT1 PKp3 AT1G32470 AT1G33110 AT1G35420 ACC1 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 LACS2 AT1G51110 PSAH-2 ACP2 AtTLP18.3 ATLOX1 AT1G55260 AT1G55360 PSAG ATSERAT2;1 AT1G56190 ATNAS4 ATATP-PRT1 AT1G60000 LHCA3 ACO2 FMO KAS LACS3 BDG1 ATGSR2 AT1G66430 DIN9 ATLOX6 ATKCR1 PSBY AT1G67950 ATHPR1 AT1G68260 CER6 AT1G70280 AOAT2 JAZ9 AT1G72500 AT1G72810 LPA3 ATSOT18 ATSOT16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATKAS2 PETE1 ACR3 LACS9 AT1G78040 ATGSTU20 PSBR AtkdsA1 ATNADP-ME4 LACS8 AT2G05920 ENR1 AtOPR3 ATHNIR KCS9 AT2G19940 ALF1 LIP1 PDTPI AtFBA1 PLAT2 AT2G22230 AAT SCPL8 ATMES3 AT2G24060 ALDH11A3 AT2G25830 FDH ATDUF3 KCS11 AT2G27680 ADT3 ADCS ANTR1 AtFAD3 CYP71A13 ATCOQ3 AT2G31670 ATFAH1 GDCH SKL2 ATCSLA07 BLH1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 CAC3 PIP2;6 PnsL1 RCA CYT1 ATKT2 AT2G42220 AT2G42690 ATLEUD1 BIO2 FAB2 ACS1 BGLU26 CHL-CPN10 AT2G44920 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis ATPEX16 AtSLD2 CER8 CAO CRR6 AtCGS1 ATCYP38 ATBCA1 AK3 ATMS2 EMB3119 ATCYSD1 AT3G07270 LHCB4.2 ADK1 OMR1 ABCI6 AtFAD7 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 PGK1 AT3G12930 ATSERAT2;2 FLU ATPME3 HEME1 ATHM4 ADS3 JAL35 ECT6 AT3G19480 BCAT4 CBB1 ADOF2 AT3G22520 APS1 ATSAHH2 GAE6 ATGHBDH AOC1 AOC2 LTA2 ATPRX AT3G26450 GAMMA-TIP2 ATSKL1 ATCM1 AAO2 ATNIT1 CAB4 AHAS GSA2 AT3G51140 ATG4 FTSZ2-2 CYP97C1 AtPIP2;1 AT3G54400 P5CS2 ATDFD SBPASE ACSF IPMI1 PIF5 GUN4 AT3G60750 ARATH;BSAS3;1 AtSLD1 CYP20-3 AtcpRRF EMB3126 ATCCD1 TROL AT4G01310 AT4G02530 EOL1 PSAD-1 PETC APR ATPC1 AtMYB74 ATPD LHCB5 AT4G10390 AT4G13050 CYP83A1 AtCLA1 CH-42 AK-HSDH ATFAH2 PRXR1 ATSMO1-2 AT4G23670 CER2 ATHB22 TAR2 ATRBP31 ACP4 B1 VTC2 FAD4 ATK2 PSAE-1 GGP1 FAD6 EMB2797 PDE334 AT4G32590 ATH1 AtGLDP1 KUP5 AT4G33740 ATOST1 CCoAOMT1 SLP2 MCA1 AT4G36390 AtPLT6 SHM1 AQI ROC1 ATPRP4 AtFBA2 AT4G39040 ATSK2 ATIPS1 AKN2 CYP79B2 DHS1 AT5G01020 AT5G01090 SQD2 FD-GOGAT KCS19 SIR ATNAS1 AtFAD8 2-Cys ERL2 FTRA2 AT5G08415 AT5G08430 AtPPa6 PMDH2 AST68 ASN3 PAS2 TUB6 AT5G12970 ATCYP20-2 AT5G13140 AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 AT5G14500 BETA GASA4 BCCP2 AT5G16240 VAT1 BCCP PSY ATCIMS PCB2 AT5G19940 ATCPN21 AT5G22340 IMS3 CaS ATCYSD2 DES1 GME AT5G34930 CAC2 ATGSL1 AT5G36160 CAT3 UDG4 AT5G41760 AOS KCS20 AT5G44020 ATFKBP13 APE2 KAS1 AT5G46580 TET1 PYL1 FRA1 ATGH9A1 AT5G50000 AT5G51110 AT5G51140 CRR1 B2 AT5G52960 GLT1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AT5G53750 VTC5 ATMAP65-1 BIO1 ADCL APO2 CLB4 ATMYB34 PDCB1 AtTudor2 AT5G62210 DXR Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. ALX8 PSAN ASN2 STR16 ATLFNR1 MSP-1 ABA1 EPS1 ACCD NDHE
GO:0008610 lipid biosynthetic process	BP	3.310e-73	AT1G01080 KCS1 ATGPAT4 PIP1;3 AT1G02150 AtD27 POR KCS2 AT1G04420 LIP2 emb2394 HPD encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase EMB2784 KCS3 FATB ALB-1V ABC1 AVDE1 ATSYP111 CRB iPGAM1 ACLA-1 ATFD1 CLPP6 AT1G11860 AT1G12080 ATNRT1 AT1G12800 AT1G13650 AT1G14270 SBH2 AT1G14345 PSS1 NDF1 ADAP AT1G16080 FUG1 AT1G18660 LHCA2*1 KCS4 AT1G19710 CVP1 AOR CER60 Cpn60beta4 PDH-E1 AT1G30690 CYP97A3 ACT1 PKp3 GBSS1 PRPL11 EMB3003 ACC1 GAPB AT1G44920 AtBGAL5 DGAT3 ACD1 AtPMEAMT AT1G49380 LACS2 AtCXE5 GDC1 ACP2 ATATG18H AtTLP18.3 ZKT CPN60B AT1G56500 AT1G57770 SQE1 ABC4 KAS AT1G62660 AT1G62780 LACS3 BDG1 AT1G65230 AT1G67700 ATKCR1 CER6 PSRP3/1 AT1G73110 AT1G73170 AT1G74070 ATKAS2 emb2184 AtGH9B7 sks5 AtHMGR1 AT1G77090 LACS9 LAX3 ATLUP1 AtkdsA1 ATNADP-ME4 AT1G80030 AT2G03420 LACS8 FLA7 ENR1 EXGT-A1 AtXYP2 AGP9 KCS9 ALF1 LIP1 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21860 AT2G22230 ATIPS2 SCPL8 AT2G23390 YCF37 AT2G24060 CYP711A1 FDH HO2 KCS11 AT2G26730 ATCDPMEK AT2G27290 AT2G27680 PY AtFAD3 ATFC-II AT2G32640 ATCB5-B PRPL28 AT2G34590 ATFAH1 EDA3 AT2G35410 SKL2 AT2G35880 ATSIG6 AT2G37660 CAC3 ATMVD1 NTRC AT2G42130 ATPPC2 AT2G42690 AT2G43030 BIO2 AT2G43560 FAB2 ACS1 AT2G44920 BEN1 ATPEX16 AtSLD2 CER8 PHR2 DEG2 AtSS2 ATCYP38 ATKT4 ATF1 ATGSTF11 PDE326 EMB3119 PDE181 AT3G06980 AT3G08680 PTAC13 AtLCY AHB2 AT3G10720 AtFAD7 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 ATHST PGK1 AT3G12930 AT3G13120 PUT4 CYP90D1 FLU ESM1 AT3G15520 ADS3 MFP1 NDF4 ATACP5 NMT1 EMB1865 CBB1 GLTP3 PKP-ALPHA AT3G23510 AT3G23530 AT3G23700 HCF101 ATGHBDH AAPT2 AT3G25660 AT3G25805 LTA2 ATPRX ORF02 CCB1 ATSKL1 AT3G28200 AT3G29185 AAO2 RPL9 PTAC16 AT3G47650 AT3G48420 ARLA1C AT3G50685 ATG4 PSRP2 CP33 ELL1 CYP97C1 HCEF1 AT3G54210 AT3G54290 PGPS2 ATTSC13 SBPASE AT3G56010 UGP3 ACSF ATWRKY69 PIF5 GUN4 AT3G59780 CDS5 AT3G60750 ARATH;BSAS3;1 AtSLD1 AT3G61870 CYP20-3 APG3 AtcpRRF APG1 EMB3126 ATCCD1 AtGPAT8 TROL AT4G01310 ATGPAT3 AT4G02530 EMB3129 ATPC1 APX4 ATPD ATSPS4F AT4G10300 FLA2 AT4G13050 CYP83A1 PDE226 APS3 CYP97B3 ATCCT2 AtCLA1 SPK1 CLPR4 AT4G17560 LIL3:1 AT4G17650 AT4G17740 AT4G18030 ATSS4 CH-42 AT4G19460 PTAC14 ATFAH2 sks4 ATSMO1-2 CER2 PGI ATHB22 AT4G24750 ACP4 CHLM B1 GDPDL3 AT4G26710 FAD4 ATK2 CIP7 NARA5 AT4G28080 PSB28 emb2726 FAD6 AT4G31530 HCF153 EMB2797 PGR3 AT4G32590 ATH1 AtGLDP1 AT4G33110 ATHDA14 ATOST1 AT4G34090 SEP1 CLB6 ERG9 SQS2 MRL1 AT4G34920 HCF244 MCA1 AT4G36390 AtGGPPS11 ACD2 SQE3 AtFBA2 AT4G39040 ATSEC14 ATIPS1 SQD2 Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. SBE2.2 54CP FD-GOGAT ATLDA KCS19 SIR ACR12 ATCESA3 AtFAD8 ATEGY2 AT5G07020 ERL2 FTRA2 AT5G08415 AT5G08650 PI-4KBETA2 PMDH2 ATMIPS3 PAS2 AT5G10690 ATSPS2F PPD5 TUB6 DiT1 EMB3137 AT5G14410 AT5G14460 ATDEF2 AT5G14910 AtENODL17 BCCP2 AT5G16240 BCCP LRR1 PSY MEX1 PCB2 AtHBP5 ATMGD2 ATCPN21 AT5G21100 AT5G21105 CaS HCF136 SQE5 AT5G24155 ATSS1 ARRPS1 CAC2 AT5G40500 AOS NDH18 KCS20 AT5G45280 ATFKBP13 CHL KAS1 FPS1 AMK2 AACT2 ADG1 OVA2 ACLB-2 AT5G50000 ATPGMP B2 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. ATOMT1 RPL24 AT5G55220 AT5G56040 LUT2 PSD2 NdhN FOLK AtcPT4 CLB4 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AtTudor2 DXR ATNDPK2 ALX8 AT5G66470 ABA1 ACCD NDHE
GO:0006733 oxidoreduction coenzyme metabolic proces...	BP	1.357e-71	POR ATHM1 LIP2 emb2394 LPA19 AT1G07440 PSAO ABC1 AVDE1 CRB ATGSTU18 ATFD1 AT1G12800 PnsL2 AT1G14345 NDF1 AT1G16080 GLYR2 AT1G18060 NDF6 AT1G19140 LHCA2*1 ATLFNR2 DRT112 ATNADK2 AT1G22630 AOR PRK ATNSI AT1G32470 GAPB FTSH1 GDC1 AT1G51110 PSAG ATSCO1 AT1G62780 NDF2 AT1G65230 cICDH CER6 HEMB1 CRR23 AT1G70770 ATKAS2 emb2184 LQY1 AT1G76450 AT1G77090 RPI2 ALF1 LIP1 ATSULA AtFBA1 AT2G21960 AT2G22230 SCPL8 NAPRT2 YCF37 PRPL35 AT2G27680 PY EMB3147 ATFC-II ATCOQ3 FTSH2 EDA3 GDCH SKL2 AT2G36145 CAC3 AT2G43560 FAB2 ACS1 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATGSTF11 EMB3119 PGK1 FLU ESM1 ATHM4 MFP1 NDF4 AT3G23700 HCF101 ATGHBDH LTA2 ATSKL1 PTAC16 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G56010 AT3G59040 PIF5 GUN4 AT3G59780 AT3G61870 CYP20-3 CSP41A AtcpRRF EMB3126 ATCCD1 ANTR2 TROL AT4G02530 PETC ATPC1 APX4 ATPD CYP83A1 AtCLA1 LIL3:1 PGR5-LIKE AtFBA7 AtFBA5 AT4G26860 AT4G28740 AT4G29120 FAD6 PGR3 PDE334 ATH1 AtGLDP1 ATHDA14 AT4G34090 SEP1 ACD2 AtVAB2 AtFBA2 ATPDX1 SBE2.2 ATLDA 2-Cys AT5G08050 AT5G08650 PMDH2 ATNADP-ME2 SIG4 AO AT5G14910 ENH1 MEX1 PCB2 ADG2 CaS HCF136 PGL5 ARRPS1 ATGSL1 atylmg3 FTSH5 AOS AT5G44520 Encodes the mitochondrial ATP synthase subunit delta. ADG1 OLD5 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 NdhN AtcPT4 CLB4 AtTudor2 DXR PSAN ATLFNR1 NDHE
GO:0044802 single-organism membrane organization	BP	1.396e-71	LPA1 NET1D FZL POR ATHM1 OE23 ABC1 CRB LRR CLPP6 ATSRS AT1G12800 AT1G16080 FUG1 AT1G18060 JMT ATCLH1 ATLFNR2 AT1G21350 PRK AtLrgB PRPL11 AT1G33600 RPL21C PMI1 CP22 AT1G44920 Lhca5 AT1G49380 AT1G51110 4CL.1 TCP3 ATLOX1 AT1G56500 AT1G61660 AT1G61740 ATSCO1 AT1G62780 AT1G64370 AT1G64510 AT1G65230 PTAC4 GAD2 AT1G67700 AT1G67870 CER6 AtTCP15 AT1G70200 AT1G73110 AtEIL3 AT1G74840 emb2184 AT1G76110 AT1G76450 TAPX AT1G80030 APG2 RNE SCY1 ATGLK1 PSB29 ATSULA AtFBA1 AT2G21560 AGL22 ATMES3 YCF37 OVA4 CYP711A1 AR781 AT2G27680 ALB3 ANTR1 PBCP CYP71A13 FTSH2 TCP10 EDA3 AT2G35410 ATCSLA07 BLH1 ATSIG6 cdf3 RCA NTRC AT2G42130 AT2G43560 BGLU26 AT2G44870 AFO PSAP CAO ATCYP38 ATBCA1 EMB3119 AIF1 AT3G09050 PTAC13 ABCI6 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G13120 ATKRS-2 MEE35 ATMT3 ATHM4 MFP1 ABCG29 HCF107 EMB1270 EMB1865 AT3G19370 ATSR2 AT3G23700 HCF101 PLSP1 AtCHUP1 CCB1 ATSKL1 AT3G29185 PTAC16 AT3G47070 AT3G48420 OEC33 ATG4 CP33 HCEF1 PDE329 SBPASE PPD6 ACSF Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. AT3G61870 APG3 AtcpRRF EMB3126 TROL GT72B1 AGY1 AT4G02530 EMB3129 PETC EMB2369 PDF2 ATPD AT4G11175 ATMPK5 LIL3:1 ATPP2-A1 B120 ATML1 PGR5-LIKE AT4G25030 NARA5 emb2726 EMB2797 PGR3 PDE334 ATH1 ATHDA14 SSR16 AT4G34730 MRL1 pde191 SAMC1 ATMTRNASEII AT5G02710 54CP ATEGY2 2-Cys AT5G07020 AT5G08650 AAP2 AtPPa6 PMDH2 PPD5 ATNADP-ME2 EMB3136 ATDEF2 BETA DHAR3 EMB2247 ATOBGC ADG2 AT5G20700 AT5G20885 emb1211 HCF136 ARRPS1 AMOS1 atylmg3 ATPRFB DEG8 AT5G40450 AOS NDH18 ATGLK2 AT5G47190 ADG1 HCT OVA2 XIP1 AT5G51110 LPA2 HCF106 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. VTC5 AT5G55220 ATOPT1 NPL1 CLB4 AT5G63710 SHA1 ALX8 ATLFNR1 MSP-1
GO:1901360 organic cyclic compound metabolic proces...	BP	1.286e-70	LHY KCS1 AtFKGP encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT1G01320 ASG4 PIP1;3 GAE2 AT1G02110 AT1G02150 AtSAM1 ATCSLD5 AtD27 FZL PSB27 POR ATHM1 KCS2 IAA3 AXR3 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase LIP2 ATGTF2H2 AT1G05150 emb2394 LPA19 UGT1 BT3 ATCTL1 ATMYB13 RHON1 HPD encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase OE23 SR45a ATPCNA1 AT1G07440 GATA11 AXS2 ADT6 PSAO ALB-1V ABC1 AVDE1 ATSYP111 AtMYB60 CRB iPGAM1 AT1G10120 ATGSTU18 ACLA-1 EMB3103 ATFD1 CBRLK1 CLPP6 ADT1 ATSRS AT1G12080 ATNRT1 AT1G12244 PHR1 AT1G12800 AFB3 ICE2 GAPA-2 ORP1D AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 SBH2 AT1G14345 AtMYB124 AT1G14460 AT1G14600 CYCA2;3 AT1G15710 FDM1 AT1G15920 ATCCR1 NDF1 ADAP AT1G16080 ATMYB58 AT1G16680 FUG1 GLYR2 AT1G18060 BEE1 AT1G18440 AT1G18485 ATSOT17 AtMYB47 NDF6 LHCA2*1 BES1 AT1G19490 ATCLH1 BEL10 ARF5 ATLFNR2 CVP1 DRT112 AT1G21060 ATNADK2 AGL87 AT1G22630 FB AT1G22910 ATCAF2 AOR MLP423 UGT74B1 ASB1 BBX15 Cpn60beta4 AT1G26790 AtHB23 SPL11 AT1G27480 SRD2 AT1G29950 PDH-E1 ARF6 AT1G30690 GlcNAc1pUT1 AT1G31710 CYP97A3 AT1G31920 PRK ATNSI ACT1 KAN2 NRT1.5 AT1G32470 PRPL11 AT-GTL1 AT1G33470 AT1G33600 EMB3003 AT1G35560 RPL21C AT1G36280 PMI1 GAPB CYCA1;1 CP22 ATMCM2 AtBGAL5 ABF2 Lhca5 DYW1 GATB AtPMEAMT AT1G49010 AT1G49380 AtCXE5 FTSH1 AT1G50270 SCL-3 POLGAMMA2 GDC1 AT1G51080 AT1G51110 4CL.1 ADOF1 AT1G52220 PSAH-2 ATFPG-1 AT1G52510 SPA4 FTM6 TCP3 ATMUM4 AT1G54500 AtTLP18.3 AtIDD7 NDF5 PSAG ATCSLE1 HAC04 AT1G56050 ATDI19 ATNAS4 AT1G56500 ATATP-PRT1 AT1G58170 AtHEMA1 SQE1 CRR28 ARF1 AT1G60590 ABC4 ATB2 ATRECQ4B AT1G62250 ACO2 FMO KAS AT1G62660 ATSCO1 AT1G62780 NRS/ER NRPD1 AT1G63640 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT1G64680 NDF2 RPOD1 G-TMT 4CL3 AT1G65070 AT1G65230 ATPAO4 AT1G65870 cICDH ZFP4 ATGSR2 AtMYB20 EMB2814 AT1G67700 ATKCR1 PSBY CSK ATHPR1 AtIDD14 CER6 AT1G68810 BIM2 FLN2 AGO7 AtTCP15 HEMB1 CMT3 AT1G70000 SNL4 EMB25 AT1G70200 ATCYCD1;1 AT1G70280 ABCB26 MMZ2 CRR23 AT1G70770 AT1G71480 AT1G72270 LPA3 ATPIN1 AtEIL3 BBX16 AT1G74070 ATSOT18 ATSOT16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G74840 ATKAS2 emb2184 UMAMIT5 AtGH9B7 LQY1 AtVAB1 AT1G76110 AT1G76120 sks5 CYCB2;4 AT1G76350 AT1G76450 AtHMGR1 AT1G76570 AT1G76880 AT1G77090 AT1G77310 LAX3 AT1G78010 RAP2.4 ATGSTU20 ATSHB ATRHM1 ATGGH2 ATLUP1 AT1G78995 ECT8 APL AT1G80850 APG2 AT2G01210 MEE65 RPI2 RGA ARR14 AtIDD5 AT2G03390 AT2G03420 RNE FLA7 EMB2761 AT2G05920 ENR1 AtOPR3 EXGT-A1 AT2G07170 AT2G07689 AT2G13440 AtXYP2 MCM9 AGP9 AT2G14910 OTP51 MCM4 AT2G17972 ATBZIP2 SCY1 HY3 ATHMA4 AAS ATGLK1 ALF1 LIP1 AtERF53 PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 ATRL2 AT2G21860 AT2G21960 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. ATIPS2 AAT AGL22 IAA8 SCPL8 DEAR3 AT2G23360 NAPRT2 ATMES7 ACL YCF37 BLH4 AT2G24060 PRPL35 PDE319 ATRPA2 AT2G24580 ESE2 AT2G25830 OVA4 ATHSFA2 CYP711A1 AT2G26500 ATDUF3 HO2 KCS11 AT2G26730 ATCDPMEK AGO4 LHW AT2G27290 AT2G27680 ADT3 AT2G28200 DRB2 RAP2.7 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 ALB3 ADCS AT2G29180 PY ANTR1 ATVLN1 PBCP AT2G30320 ATFC-II ATC4H PSBW CYP71A13 ATCOQ3 FTSH2 TCP10 ATERF15 BBX25 ATNTH1 AT2G31670 ATCB5-B ATCOP1 ATSUVH2 AT2G33550 AtCRL2 ATUBC24 AT2G34590 ATHB-14 EDA3 GDCH AT2G35390 AT2G35410 SKL2 AT2G35640 ATCSLA07 ATERF38 AT2G35760 AT2G35880 BLH1 ATE2FA AT2G36145 AT2G36200 AT2G36350 DML1 GAMMA-TIP MAT3 AT2G36950 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. UMAMIT13 AS1 AT2G37660 PDX1L4 ATPDX1.1 ATSCAR2 RDO2 ATMVD1 PIP2;6 PnsL1 RCA LHCB4.3 AT2G40260 AT2G40400 HEME2 ATKT2 ETG1 CYP98A3 AT2G41130 ARR8 NTRC ATVLN2 AGK1 AtSPL9 ATBZIP34 AT2G42510 AT2G43030 ATLEUD1 BIO2 AT2G43500 AT2G43560 FAB2 ACS1 AT2G43760 BGLU26 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis BEN1 AT2G46250 SPA1 ARF11 AT2G46810 PSAP PIL1 SPL1 ATDUF5 ATMYB12 PHR2 CRR6 ATCFM2 ATHB-1 ATCYP38 ATBCA1 ATRGP1 RAD23-3 ATF1 AT3G02820 ATGSTF11 PDE326 IAA16 EMB3119 RALFL22 AIF1 AT3G06410 GATA15 AT3G06980 AT3G07270 AT3G08030 AT3G08680 LHCB4.2 AT3G09050 ATHY2 PTAC13 AT3G09580 CRM3 ADK1 GYRB1 PAL4 SPD1 ABCI6 AT3G10720 AT3G10840 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 emb2738 AT3G12210 PGK1 AT3G12930 AT3G13000 AT3G13040 ATSERAT2;2 AT3G13120 AT3G13180 AT3G13226 ATKRS-2 AT3G13510 PUT4 CYP90D1 AT3G13740 AT3G14067 FLU ESM1 ATPME3 AT3G14330 ATRHM3 AT3G14890 HEME1 IDM1 MEE35 PRPS20 SPL5 ATHM4 AT3G15520 AT3G15550 ADS3 MFP1 PSAH-1 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ABCG29 AT3G16350 ATEBP HCF107 ECT6 POK1 MAT4 ATCRSH HYH ATACP5 WOX1 NRPD2B EMB1865 AT3G18870 AtTic62 ATCAD4 BCAT4 CBB1 AT3G20230 POLGAMMA1 AT3G20680 PSBTN AtBBX32 GluTRBP 4CL5 4CL2 ADOF2 UGT84A2 AT3G22150 AT3G22520 ATTSO1 ELIP APS1 PKP-ALPHA ATCFM3A bHLH34 ATPHO1 AT3G23700 GAE6 ATTOPII HCF101 ALDH1A AT-HSFC1 PLSP1 ICK3 ATGHBDH AtCHUP1 LTA2 RPL15 ATPRX GAPA ATSNM1 CCB1 ATICE1 ATSKL1 DRB3 ATTSO2 LHCB2 AT3G28200 AT3G28460 ATCM1 AT3G42660 CHR38 ATNIT1 JK224 AT3G45900 ATMYB48 PTAC16 DUT1 AT3G47070 PEX11B ATSMC2 PYE AT3G47650 AT3G47830 ATATM AT3G48200 AT3G48420 DCF GSA2 AT3G49000 OBP1 ICK2 BEH1 OEC33 AtHB28 SRS1 GATA6 AT3G51140 GMD2 AT3G51280 ATSSL4 ATG4 AT3G51950 FTSZ2-2 KIPK ELL1 CYP97C1 ATPAL2 AT3G53680 PYRR HCEF1 ATPTR1 AT3G54390 LHCA1 PPL1 ATTSC13 OVA1 P5CS2 ATDFD SBPASE ESK1 AT3G56010 AT3G56290 AT3G56680 AT3G56870 ACSF AT3G57060 BPG2 PrfB3 AGL16 AT3G57800 SPL15 GIS ATWRKY69 AT3G59040 PIF5 GUN4 AT3G59780 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. HAT3 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. MAP65-4 AT3G61080 HD-GL2-1 ARATH;BSAS3;1 ATX3 AT3G61870 CYP20-3 ATMYB11 APG3 ATIPT3 CSP41A OEP6 AtcpRRF OTP86 APG1 EMB3126 AT3G63510 ATCCD1 BRCA2(IV) UNE10 YAB3 ANTR2 FDM2 AT4G00560 AT4G00870 AT4G00895 MEE47 TROL GT72B1 AT4G01460 ABC1 HEMG1 AtSAM2 MCM7 AT-RSH1 AT4G02530 EOL1 PSAD-1 EMB3129 AtRBP-DR1 AFB1 PETC EMB2369 APR ATPC1 PDF2 AtMYB74 ATK5 ARGAH2 APX4 AT4G09040 ATPD ATDET1 LHCB5 AT4G11100 SPA2 AT4G11175 ATMPK5 AT4G11570 FLA2 PSAL AT4G12830 EPFL9 CYP83A1 ATSAHH1 KINESIN-12A AT4G14330 bHLH104 NF-YB3 APS3 ELIP2 ATTCX2 AT4G15430 IAGLU AtCLA1 AT4G16141 PHYD SPK1 AT4G17560 LIL3:1 AT4G17810 MYC4 APRR2 PHYE DEG5 TCP2 CH-42 AT4G18740 AT4G18810 AT4G18820 CMT2 Encodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death. AK-HSDH AAH PTAC14 PyrD PSBQ ATM4 ATML1 AT4G21770 sks4 ATSMO1-2 PGR5-LIKE CRF2 AT4G24350 AGL24 TAR2 AT4G24750 ATRBP31 AT4G24790 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) AT4G25030 ACP4 CHLM OTP70 AT4G25280 AT4G25290 CGA1 AtFBA7 AtFBA5 AtWRKY20 GDPDL3 MAP65-2 ATK2 AT4G27240 CIP7 NARA5 AT4G28080 AT4G28740 PSAE-1 AT4G28780 emb2726 IAA27 AT4G29100 AT4G29120 AT4G30180 AHA2 AR2 GAE1 AT4G30470 SARK GGP1 FAD6 ACDO1 AT4G31530 PGR3 PDE334 LUG ATSDX1 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHB-8 ATH1 AtGLDP1 ATHDA14 AtHMAC6 AT4G33740 AT4G33760 CCoAOMT1 AT4G34090 SEP1 BLH6 SSR16 ERG9 SQS2 AT4G34730 ASE2 MRL1 AtMYB32 HCF244 AT4G35270 AT4G36180 CYP84A1 GATA7 BGAL3 AT4G36390 BEE2 ATRL3 AtPLT6 BLH2 ACD2 CYP81F3 ANT SQE3 SHM1 ATCAD6 ATCAD7 pde191 AQI AtVAB2 ATMYB4 AtFBA2 AT4G39040 VHA-A3 ATCAD9 SAMC1 ATSK2 AT4G39630 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AKN2 CYP79B2 DHS1 AT5G01020 LAC8 SQD2 ATPDX1 AIRP2 LHCB4.1 AT5G02160 Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ATMTRNASEII AT5G02370 AT5G02460 AT5G02710 ATRAB AtNCS1 SBE2.2 54CP GYRB2 FD-GOGAT ATPAL3 ATLDA BTR1 SIR ATOFP13 NOL ATNAS1 ATCESA3 AT5G05180 AT5G05790 2-Cys HAT14 AT5G07020 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ATMYB29 AT5G08050 TCP17 BIM1 FTRA2 AT5G08415 AT5G08430 PDE340 AT5G08650 AtSRT2 AtPPa6 PMDH2 AST68 AIL6 AT5G10605 AT5G10690 AT5G10960 AT5G10970 HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 TINY2 ATNADP-ME2 TUB6 DiT1 AT5G12970 ATGSL12 EMB3136 ABAR SVR3 SIG4 CCS52B ATCHS EMB3137 AT5G14460 AT5G14500 AT5G14700 BETA AO AT5G14910 AT5G14970 AtENODL17 AT5G15390 AtbZIP3 BCCP LRR1 AtMYB43 EMB2247 ENH1 PSY MEX1 AT5G17660 anac088 ATSRA1 AT5G18550 ATOBGC PCB2 NSH3 ADG2 AT5G19290 ATMGD2 CRR42 AT5G21100 AT5G21105 ATHMA8 anac089 AT5G22340 IMS3 CaS HCF136 AT5G23280 HMGB6 AT5G23480 SLAH3 ATSIG5 SQE5 AT5G24155 PGL5 LSU2 CRY3 AT5G25590 PYR6 AT5G28300 AT5G28500 GME ARRPS1 AT5G34930 AT5G35170 CAC2 ATGSL1 AHK2 AT5G35970 atylmg3 AT5G36160 ATPRFB CAT3 AT5G37010 ARF8 ARLA1A AT5G38520 CRR7 UDG4 ORTH1 DRB5 ATUBC8 AT5G41760 AT5G42070 FTSH5 AOS AT5G43150 SPL2 TZP AT5G44020 ATGLK2 AT5G44520 MCM6 AT5G45280 ATFKBP13 AT5G45720 CHL AtNUDT11 AtLARP6a AT5G46390 AT5G46420 AT5G46580 bHLH071 PYL1 ATNIG1 AT5G46910 Encodes the mitochondrial ATP synthase subunit delta. AT5G47190 AT5G47390 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT5G47620 NF-YB2 FPS1 FRA1 AMK2 AT5G48220 AACT2 ADG1 AT5G48360 HINT3 ATCAP-C LPA66 HCT OVA2 DDM2 ATMYB111 ACLB-2 ATPPOX AT5G50000 AT5G50110 OLD5 AT5G50370 AT5G51110 AT5G51140 LPA2 At-NEET ATPGMP AT5G52010 CRR1 SCL8 AT5G52660 AT5G52780 ATWRKY27 AT5G52960 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 TAT7 ATOMT1 PTAC15 THI1 AT5G55220 CRR21 AT5G56040 AT5G56840 AT5G56850 GATA21 NAP1;3 CIA2 AHA3 BIO1 ADCL APO2 NPL1 NdhN AT5G58330 DDB2 ATUXS3 AtVIP2 ARF4 ATPDX2 CLB4 ATMYB34 PNM1 PIF7 AtMYB28 AtTudor2 ARF1-BP CDF1 AHA11 DXR AT5G62840 BT1 ATNDPK2 AT5G63700 SHA1 ALX8 PSAN ATGCH EMB3144 AT5G65220 ATHB-5 KAC2 STR16 ATLFNR1 AT5G66470 AT5G66520 MSP-1 ENY AT5G66770 ICU2 EPS1 TOE3 AT5G67200 PSBA MATK RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBF PSBE ORF31 PETG PSAJ RPS18 RPL20 CLPP1 PSBB PSBT PSBN PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 NDHB.1 NDHF YCF5 NDHD NDHE NDHG NDHI NDHA RPS15 NDHB.2 RPL2.2 ATP6 NAD5
GO:0009069 serine family amino acid metabolic proce...	BP	4.666e-70	AT1G01630 AtSAM1 POR LIP2 ATCTL1 OE23 EMB2784 PSAO AVDE1 AT1G09310 AtHIR1 ACLA-1 ATGLX1 AT1G11860 ATSRS ELP AT1G12800 CP24 ATSOT17 DRT112 AOAT1 AOR PSAK PSAF ATROPGEF14 ACBP PRK AT1G32470 AT1G33110 AT1G35420 SHM7 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 ACD1 PSAH-2 AtTLP18.3 AT1G55260 AT1G55360 PSAG ATSERAT2;1 AT1G56190 ATATP-PRT1 AT1G60000 LHCA3 ACO2 FMO AT1G66430 PSBY AT1G67950 ATHPR1 AT1G68260 CER6 AT1G72500 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATKAS2 PETE1 ACR3 AT1G78040 PSBR ATHNIR ALF1 LIP1 PDTPI AtFBA1 AT2G22230 SCPL8 ATMES3 ALDH11A3 AtGLDP2 AT2G27680 AT2G31670 GDCH SKL2 BLH1 PnsL1 AT2G42220 AT2G42690 ATLEUD1 FAB2 ACS1 CAO EMB3119 ATCYSD1 LHCB4.2 ADK1 ABCI6 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 ATSERAT2;2 FLU ATPME3 JAL35 AT3G19480 BCAT4 CBB1 ADOF2 ATSAHH2 ATGHBDH LTA2 ATPRX AT3G26450 GAMMA-TIP2 ATSKL1 CAB4 GSA2 ATG4 AT3G52500 FTSZ2-2 AtPIP2;1 AT3G54400 SBPASE ACSF PIF5 GUN4 AT3G60750 ARATH;BSAS3;1 CYP20-3 TROL AT4G01310 EOL1 PSAD-1 APR ATPC1 LHCB5 CYP83A1 SHM4 AtCLA1 PRXR1 ATSMO1-2 AT4G23670 CER2 MSRA4 PSAE-1 FAD6 ATH1 AtGLDP1 KUP5 CCoAOMT1 SLP2 MCA1 SHM1 AQI ROC1 ATPRP4 AtFBA2 CYP79B2 AT5G01090 SIR AtPPa6 PMDH2 AST68 PAS2 TUB6 ATCYP20-2 AT5G13140 AT5G13980 AT5G14120 GASA4 PCB2 AT5G19940 ATCPN21 IMS3 CaS AT5G23820 ATCYSD2 DES1 ATGSL1 AOS AT5G44020 APE2 TET1 ATGH9A1 AT5G50000 ATMAP65-1 CLB4 PDCB1 DXR PSAN ASN2 MSP-1 NDHE
GO:0061024 membrane organization	BP	4.810e-69	LPA1 NET1D FZL POR ATHM1 OE23 ABC1 CRB LRR CLPP6 ATSRS AT1G12800 AT1G16080 FUG1 AT1G18060 JMT ATCLH1 ATLFNR2 AT1G21350 PRK AtLrgB PRPL11 AT1G33600 RPL21C PMI1 CP22 AT1G44920 Lhca5 AT1G49380 AT1G51110 4CL.1 TCP3 ATLOX1 AT1G56500 AT1G61660 AT1G61740 ATSCO1 AT1G62780 AT1G64370 AT1G64510 AT1G65230 PTAC4 GAD2 AT1G67700 AT1G67870 AT1G68110 CER6 AtTCP15 AT1G70200 AT1G73110 AtEIL3 AT1G74840 emb2184 AT1G76110 AT1G76450 TAPX AT1G80030 APG2 RNE SCY1 ATGLK1 PSB29 ATSULA AtFBA1 AT2G21560 AGL22 ATMES3 YCF37 AT2G25430 OVA4 CYP711A1 AR781 AT2G27680 ALB3 ANTR1 PBCP CYP71A13 FTSH2 TCP10 EDA3 AT2G35410 ATCSLA07 BLH1 ATSIG6 cdf3 RCA NTRC AT2G42130 AT2G43560 BGLU26 AT2G44870 AFO PSAP CAO ATCYP38 ATBCA1 EMB3119 AIF1 AT3G09050 PTAC13 ABCI6 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G13120 ATKRS-2 MEE35 ATMT3 ATHM4 MFP1 ABCG29 HCF107 EMB1270 EMB1865 AT3G19370 ATSR2 AT3G23700 HCF101 PLSP1 AtCHUP1 CCB1 ATSKL1 AT3G29185 PTAC16 AT3G47070 AT3G48420 OEC33 ATG4 CP33 HCEF1 PDE329 SBPASE PPD6 ACSF Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. AT3G61870 APG3 AtcpRRF EMB3126 TROL GT72B1 AGY1 AT4G02530 EMB3129 PETC EMB2369 PDF2 ATPD AT4G11175 ATMPK5 LIL3:1 ATPP2-A1 B120 ATML1 PGR5-LIKE AT4G25030 NARA5 emb2726 EMB2797 PGR3 PDE334 ATH1 ATHDA14 SSR16 AT4G34730 MRL1 pde191 SAMC1 ATMTRNASEII AT5G02710 54CP ATEGY2 2-Cys AT5G07020 AT5G08650 AAP2 AtPPa6 PMDH2 PPD5 ATNADP-ME2 EMB3136 ATDEF2 BETA DHAR3 EMB2247 ATOBGC ADG2 AT5G20700 AT5G20885 emb1211 HCF136 ARRPS1 AMOS1 atylmg3 ATPRFB DEG8 AT5G40450 AOS NDH18 ATGLK2 AT5G47190 ADG1 HCT OVA2 XIP1 AT5G51110 LPA2 HCF106 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. VTC5 AT5G55220 ATOPT1 NPL1 CLB4 AT5G63710 SHA1 ALX8 ATLFNR1 MSP-1
GO:0042440 pigment metabolic process	BP	4.911e-69	POR encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase LIP2 encodes a flavonol-7-O-rhamnosyltransferase involved in the formation of rhamnosylated flavonols HPD ALB-1V ABC1 AVDE1 CRB ACLA-1 AT1G11860 AT1G12800 NDF1 AT1G16080 AT1G18440 NDF6 ATCLH1 AOR UGT78D1 CYP97A3 ACT1 PRPL11 AT1G36280 GAPB AT1G49380 AtTLP18.3 ZKT CPN60B AT1G56050 AT1G56500 AT1G57770 AtHEMA1 AT1G62250 4CL3 AT1G65230 AT1G67700 CER6 HEMB1 ABCB26 AT1G71480 AT1G73110 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATKAS2 emb2184 AT1G76450 AT1G76570 ATRHM1 AT1G80030 ARR14 AHK4 AT2G14910 ATGLK1 LIP1 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA AtFBA1 AT2G21385 ATIPS2 CYP711A1 ER HO2 ATCDPMEK AT2G27680 ATFC-II AT2G32640 ATCOP1 EDA3 AT2G35390 AT2G35410 SKL2 AT2G35760 ATSIG6 AT2G37660 AT2G40400 HEME2 ARR8 NTRC AT2G42690 AT2G43030 FAB2 ACS1 AT2G44920 PHR2 ATHB-1 ATCYP38 ATPPT2 PDE326 AT3G03770 PDE181 AT3G08030 AtLCY DGD1 ATHST AT3G13040 AT3G13120 AT3G14067 FLU PRPS20 ADS3 EMB1865 GluTRBP UGT84A2 ELIP bHLH34 AT3G23700 HCF101 ATPRX ORF02 ATSKL1 AT3G28220 AT3G45900 PTAC16 AT3G48420 GSA2 AT3G50685 F3'H ATG4 CYP97C1 AT3G53960 HCEF1 ATPTR1 A11 AT3G56680 ACSF PIF5 GUN4 AT3G59780 AT3G61080 AT3G61870 CYP20-3 ATMYB11 APG3 CSP41A ATCCD1 TROL ABC1 AT4G02530 ATPC1 APX4 ATPD AT4G11570 The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. PDE226 ELIP2 AtCLA1 LIL3:1 MYC4 CH-42 CCD4 AAH CHLM B1 CGA1 AtFBA5 ATK2 CIP7 emb2726 FAD6 ACDO1 ATH1 AtGLDP1 SEP1 ASE2 HCF244 ACD2 AtFBA2 AT4G39040 SQD2 AIRP2 FD-GOGAT ATLDA NOL AtCHIL UGT76C2 AT5G07020 CYP75B1 AT5G08050 ATFLS1 AT5G08650 PMDH2 HY5 ABAR ATCHS AT5G14970 UGT78D2 PSY PCB2 AtHBP5 HCF136 ARRPS1 AHK2 AT5G35970 AHP3 AT5G43150 ABCI21 ATGLK2 ATFKBP13 CHL AMK2 KAT5 OVA2 ATMYB111 B2 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. ATOMT1 AT5G55220 GATA21 LUT2 NdhN CLB4 AT5G62210 DXR ABA1
GO:0000096 sulfur amino acid metabolic process	BP	1.215e-67	AT1G01630 AtSAM1 POR LIP2 AT1G05150 ATCTL1 OE23 EMB2784 PSAO AVDE1 AT1G09310 AtHIR1 ACLA-1 ATGLX1 AT1G11860 ATSRS ELP AT1G12800 AFB3 CP24 ATSOT17 DRT112 AOAT1 AOR PSAK PSAF ATROPGEF14 ACBP PRK AT1G32470 AT1G33110 AT1G35420 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 ACD1 PSAH-2 AtTLP18.3 AT1G55260 AT1G55360 PSAG ATSERAT2;1 AT1G56190 ATATP-PRT1 AT1G60000 LHCA3 ACO2 FMO FMO AT1G66430 PSBY AT1G67950 ATHPR1 AT1G68260 CER6 AT1G70280 AT1G72500 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATKAS2 PETE1 ACR3 AT1G78040 PSBR AT2G05920 ATHNIR ALF1 LIP1 PDTPI AtFBA1 AT2G22230 SCPL8 ATMES3 ALDH11A3 AT2G27680 ATCOQ3 AT2G31670 GDCH SKL2 BLH1 PnsL1 ATKT2 AT2G42220 AT2G42690 ATLEUD1 FAB2 ACS1 MTHFR2 CAO AtCGS1 ATMS2 EMB3119 ATCYSD1 LHCB4.2 ADK1 ABCI6 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 ATSERAT2;2 FLU JAL35 ECT6 MAT4 BCAT4 CBB1 ADOF2 AT3G22520 ATSAHH2 ATGHBDH LTA2 ATPRX AT3G26450 GAMMA-TIP2 ATSKL1 CAB4 GSA2 ATG4 FTSZ2-2 AtPIP2;1 AT3G54400 SBPASE ACSF PIF5 GUN4 MTHFR1 AT3G60750 ARATH;BSAS3;1 CYP20-3 TROL AT4G01310 EOL1 PSAD-1 APR ATPC1 LHCB5 CYP83A1 AtCLA1 PRXR1 ATSMO1-2 AT4G23670 CER2 ATK2 PSAE-1 FAD6 ATH1 AtGLDP1 KUP5 AT4G33740 CCoAOMT1 SLP2 MCA1 AQI ROC1 ATPRP4 AtFBA2 CYP79B2 AT5G01020 AT5G01090 SIR AT5G08430 AtPPa6 PMDH2 AST68 PAS2 TUB6 ATCYP20-2 AT5G13140 AT5G13980 AT5G14120 AT5G14500 GASA4 ATCIMS PCB2 AT5G19940 ATCPN21 IMS3 CaS ATCYSD2 DES1 ATGSL1 AT5G41760 AOS AT5G44020 APE2 TET1 FRA1 ATGH9A1 AT5G50000 AT5G51140 ATMAP65-1 EOL2 CLB4 PDCB1 DXR PSAN ASN2 MSP-1 NDHE
GO:0006520 cellular amino acid metabolic process	BP	1.659e-67	AT1G01630 AtSAM1 POR LIP2 AT1G05150 UGT1 ATCTL1 HPD OE23 EMB2784 ADT6 PSAO AVDE1 AT1G09310 AtHIR1 ATBCAT-1 ACLA-1 CLPP6 ADT1 ATGLX1 AT1G11860 ATSRS ELP AT1G12800 AFB3 PSS1 AT1G15410 AT1G15710 CP24 ATSOT17 DRT112 AOAT1 AOR UGT74B1 ASB1 PSAK AK-HSDH PSAF ATROPGEF14 AT1G31710 ACBP PRK AT1G32470 AT1G33110 AT1G35420 SHM7 expressed protein localized to the inner membrane of the chloroplast. GAPB ATSDC1 CP22 ACD1 GATB AT1G51110 PSAH-2 AtTLP18.3 AT1G55260 AT1G55360 PSAG ATCSLE1 ATSERAT2;1 AT1G56190 ATATP-PRT1 AT1G60000 LHCA3 ACO2 FMO FMO GAD2 ATGSR2 AT1G66430 PSBY AT1G67950 ATHPR1 AT1G68260 CER6 PHYLLO AT1G70280 AOAT2 AT1G72500 AT1G72810 LPA3 ATSOT18 ATSOT16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATKAS2 UMAMIT5 PETE1 ACR3 AT1G78040 ATGSTU20 ATGGH2 PSBR EMB2761 AT2G05920 AtOPR3 ATHNIR ADC1 AT2G19940 AAS ALF1 LIP1 PDTPI AtFBA1 AT2G22230 AAT SCPL8 ATMES3 AT2G24060 ALDH11A3 AT2G24580 AT2G25830 OVA4 AtGLDP2 AT2G26800 AT2G27680 ADT3 ADCS ATCOQ3 AT2G31670 GDCH SKL2 BLH1 AT2G36950 ATPAL1 NATA1 PnsL1 ATKT2 AT2G42220 AT2G42690 ATLEUD1 FAB2 ACS1 MTHFR2 BGLU26 CHL-CPN10 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis CAO CRR6 AtCGS1 AK3 ATMS2 EMB3119 ATCYSD1 AT3G07270 LHCB4.2 ADK1 PIP5K9 OMR1 PAL4 ABCI6 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 ATSERAT2;2 ATKRS-2 FLU ATPME3 HEME1 ATHM4 JAL35 ECT6 MAT4 AT3G19480 BCAT4 CBB1 ADOF2 AT3G22520 APS1 ATSAHH2 GAE6 ATGHBDH LTA2 ATPRX AT3G26450 GAMMA-TIP2 ATSKL1 ATCM1 CAB4 AHAS GSA2 ATBCAT-3 AT3G51140 ATG4 AT3G52500 FTSZ2-2 ATPAL2 AtPIP2;1 AT3G54400 OVA1 P5CS2 ATDFD SBPASE ACSF IPMI1 PIF5 GUN4 MTHFR1 AT3G60750 ARATH;BSAS3;1 CYP20-3 AtcpRRF EMB3126 TROL AT4G01310 EOL1 PSAD-1 EMB2369 APR ATPC1 ARGAH2 LHCB5 CYP83A1 SHM4 IAGLU AtCLA1 AK-HSDH PRXR1 ATSMO1-2 AT4G23670 CER2 ATRBP31 MSRA4 ATK2 PSAE-1 GGP1 FAD6 ATH1 AtGLDP1 KUP5 AT4G33740 AT4G33760 CCoAOMT1 SLP2 MCA1 AT4G36390 AtPLT6 SHM1 AQI ROC1 ATPRP4 AtFBA2 AT4G39040 ATSK2 ATIPS1 AKN2 CYP79B2 DHS1 AT5G01020 AT5G01090 ATPDX1 ATPAL3 SIR AT5G08430 AtPPa6 PMDH2 AST68 ASN3 PAS2 TUB6 DiT1 AT5G12970 ATCYP20-2 AT5G13140 AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 AT5G14500 GASA4 VAT1 EMB2247 ATCIMS PCB2 AT5G19940 ATCPN21 AT5G22340 IMS3 CaS AT5G23820 ATCYSD2 DES1 AT5G34930 ATGSL1 AT5G36160 CAT3 AT5G41760 AOS AT5G44020 APE2 AT5G46580 TET1 PYL1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. FRA1 AT5G48220 OVA2 ATGH9A1 AT5G50000 AT5G51110 AT5G51140 CRR1 AT5G52960 GLT1 ATMAP65-1 ADCL APO2 EOL2 CLB4 ATMYB34 PDCB1 DXR PSAN DCT ASN2 STR16 MSP-1 NDHE
GO:0009416 response to light stimulus	BP	1.775e-67	LHY KCS1 ATGPAT4 AT1G02110 POR AT1G04040 KCS2 AT1G04430 AT1G04680 ATGLR3.4 5PTASE13 BT3 ATCTL1 encodes a flavonol-7-O-rhamnosyltransferase involved in the formation of rhamnosylated flavonols BBX24 OE23 ATNDI1 SR45a AtRLP1 ATRAB-A2B KCS3 ADT6 ABC1 AVDE1 AtMYB60 CRB ATGSTU17 ACLA-1 CBRLK1 ADT1 ELP PHR1 AFB3 AT1G14200 PKS2 SBH2 CP24 ACR11 ATEGY3 LHCA2*1 ARAC4 DRT112 AT1G20870 FB AOR CER60 ABCB13 ABCB14 AB165 AT1G30440 FEI1 ACBP PRK OHP2 ATNR2 GAPB CP22 mtLPD1 AT1G50280 AT1G51200 AT1G51400 4CL.1 TSA1 FRS6 SPA4 AT1G54050 AtTLP18.3 AT1G56500 AtHEMA1 ATFD2 ATGPT2 RPOD1 4CL3 AT1G66080 PMI2 DIN9 RBCS1A CSK ATHPR1 CER6 AT-EXP1 SHW1 SNL4 PG2 MMZ2 ATPIN1 AT1G73650 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. BBX16 SPPA ATHSP101 QKY ATKAS2 UMAMIT5 AtGH9B7 AT1G76450 AT1G76570 LAX3 RAP2.4 ATGSTU20 ATRHM1 PSBR RGA LHCB2 PGR5 EXGT-A1 KCS9 ATGLR2 HY3 AT2G19310 ATCLASP AtFBA1 ATRL2 SEP2 AT2G22230 ATIPS2 AT2G23390 AFR AT2G25530 ATHSFA2 FDH AR781 KCS11 ATCDPMEK ADT3 AT2G28200 ANTR1 PBCP ATC4H FTSH2 BBX25 ATGLR3.7 ATCOP1 ATSUVH2 ABR ATHB-14 FEI2 BLH1 ABCB1 ATSIG6 ATPAL1 ATEXP3 LCD1 AtAUX1 ATPDX1.1 RDO2 RCA LHCB4.3 AT2G42690 SPA1 AtGH3.11 ROPGAP3 PIL1 AtGolS1 CAO ATMYB12 ATHB-1 MEE31 AT3G03770 FRS7 AT3G08640 AT3G08660 LHCB4.2 Fes1A AT3G09440 AT3G12050 ATHSP70 DRT100 AT3G13510 FLU AT3G15570 ADS3 AT3G16370 AT3G16850 HYH mRNA level of the MEB5.2 gene (At3g17800) remains unchanged after cutting the inflorescence stem ACT2 BCAT4 CBB1 AT3G19850 AtBBX32 4CL2 UGT84A2 AT3G22104 ATWNK2 ELIP bHLH34 AT3G24190 ATFKBP62 AFH1 AT3G26490 GAMMA-TIP2 GAPA ATICE1 LHCB2 ABCB15 ABCB19 ATJ AT3G44820 JK224 PTAC16 AT3G47070 DIN11 BAM2 OEC33 AT3G50840 GATA6 F3'H ATGLR3.6 ATWNK5 AT3G52740 HCEF1 LHCA1 PMR6 A11 ACSF AT3G57020 PIF5 ACR4 AT3G60320 SDR1 CYP20-3 CP12 CSP41A EDA8 AHDP TROL AGY1 ATXT2 AFB1 PETC APX4 ATDET1 LHCB5 SPA2 Hop3 SKU5 CYP83A1 The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. ELIP2 AT4G15430 UGT84A1 AT4G15545 AtCLA1 ATVAMP724 PHYD ATOPT3 LIL3:1 PHYE KAT2 Encodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death. BAM3 PSBQ sks4 PGR5-LIKE CRR31 ACP4 MSRA4 ABCB2 CGA1 CIP7 VEL1 FAD6 ENP ATSDX1 ATH1 AT4G33500 SEP1 ATCAP1 CAT2 HCF244 ATGLR3.2 CYP84A1 GATA7 MEL1 SQE3 SHM1 ATROPGEF1 ATMYB4 ROC1 AT5G01090 ATPDX1 LHCB4.1 OHP ABCI20 AtNCS1 FD-GOGAT KCS19 ATCESA3 AtCHIL FTIP1 CYP75B1 AT5G08430 ATFLS1 AT5G08650 NDC1 PMDH2 PAS2 HY5 TUB6 AT5G13140 SIG4 ATCHS LNG1 AT5G15950 AtNIK1 BCCP UGT78D2 ENH1 ATOBGC ADG2 AT5G19730 CaS HCF136 EFO2 ATSIG5 CRY3 AMOS1 CAC2 ATGSL1 PMI15 RBCS3B RBCS2B RBCS1B FTSH5 AOS KCS20 ABCI21 APE2 AT5G47800 PAT1 ADG1 ATFKBP65 KAT5 HRB1 ATGH9A1 cpHsc70-2 EFO1 ATHS83 AT5G54660 THI1 GATA21 APO2 NPL1 DDB2 GIL1 CLB4 COB PNM1 PIF7 AT5G62210 DXR ATNDPK2 ALX8 JK218 CESA6 BAM1 AT5G66560 MSP-1 ABA1 AT5G67385
GO:0044255 cellular lipid metabolic process	BP	2.086e-66	AT1G01080 KCS1 ATGPAT4 AT1G02150 AtD27 POR KCS2 AT1G04420 LIP2 emb2394 5PTASE13 AT1G06550 HPD EMB2784 KCS3 FATB ALB-1V ABC1 AVDE1 CRB ACLA-1 AT1G10900 ATFD1 CLPP6 AT1G11860 AT1G12800 AT1G13650 AT1G14270 SBH2 AT1G14345 PSS1 NDF1 ADAP AT1G16080 UP6 FUG1 AT1G18660 LHCA2*1 KCS4 AT1G19710 CVP1 ATPIP5K1 AOAT1 AOR CER60 Cpn60beta4 AT1G29670 PDH-E1 IMPL1 CYP97A3 ACT1 PKp3 GBSS1 PRPL11 AT1G33700 EMB2756 ACC1 ATNR2 GAPB AT1G44920 5PTASE11 DGAT3 ACD1 AtPMEAMT AT1G49380 LACS2 GDC1 ATBG1 AtFAP3 ACP2 ATATG18H AtTLP18.3 ATLOX1 AT1G55260 ZKT CPN60B AT1G56500 AT1G57770 SQE1 ABC4 KAS AT1G62780 LACS3 BDG1 AT1G65230 ATLOX6 AT1G67700 ATKCR1 CER6 PSRP3/1 AT1G71710 EDA17 AT1G73110 AT1G73170 AT1G73740 AT1G74070 ATKAS2 emb2184 AtHMGR1 AT1G77090 LACS9 PIP5K2 ATGA2OX1 ATLUP1 AtkdsA1 ATNADP-ME4 AT1G80030 AT2G03420 LACS8 ENR1 KCS9 HY3 ALF1 LIP1 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G22230 ATIPS2 SCPL8 AT2G23390 YCF37 AT2G24060 CYP711A1 FDH HO2 KCS11 ATCDPMEK AT2G27290 AT2G27680 PY AtFAD3 ATFC-II AT2G32640 ATCB5-B AtCLO3 PRPL28 ATFAH1 EDA3 AT2G35410 SKL2 ATSIG6 AT2G37660 CAC3 ATMVD1 NTRC AT2G42130 ATPPC2 AT2G42690 AT2G43030 AT2G43560 FAB2 ACS1 5PTase12 AT2G44920 AT2G44970 AT2G45180 ATPEX16 CYP86A8 AtSLD2 CER8 PHR2 AT2G47780 DEG2 AtSS2 ATCYP38 ATKT4 ATF1 ATGSTF11 PDE326 EMB3119 PDE181 AT3G06980 PTAC13 PIP5K9 AtLCY AHB2 AtFAD7 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 ATHST PGK1 AT3G12930 AT3G13120 PUT4 FLU ESM1 AT3G15520 ADS3 MFP1 NDF4 AT3G16370 AAE7 ATACP5 NMT1 EMB1865 GLTP3 AT3G23700 HCF101 ATGHBDH AAPT2 AT3G25660 AT3G25805 LTA2 ATPRX ORF02 CCB1 ATSKL1 AT3G29185 AAO2 LTPG2 RPL9 PTAC16 AT3G47650 AT3G48420 ARLA1C AT3G50685 AT3G51090 LTP5 ATG4 PSRP2 CP33 ELL1 CYP97C1 HCEF1 AT3G54210 AT3G54290 PLA PGPS2 ATTSC13 SBPASE AT3G56010 UGP3 ACSF PIF5 GUN4 AT3G59780 CDS5 AT3G60750 ARATH;BSAS3;1 AtSLD1 AT3G61870 CYP20-3 APG3 AtFAP1 AtcpRRF APG1 EMB3126 ATCCD1 ATT1 AtGPAT8 TROL AT4G01310 ATGPAT3 AT4G02530 EMB3129 ATPC1 AT4G05090 APX4 AT4G09630 ATPD AT4G10060 ATSPS4F AT4G10300 AT4G13050 CYP83A1 PDE226 ATECI3 CYP97B3 ATCCT2 AtCLA1 CLPR4 AT4G17560 LIL3:1 AT4G17650 AT4G17740 AT4G18030 ATSS4 CH-42 AT4G19460 PTAC14 ATRAB8D ATFAH2 ATSMO1-2 CER2 PGI ATHB22 AT4G24750 ACP4 CHLM B1 AT4G26710 FAD4 ATK2 CIP7 NARA5 AT4G28080 PSB28 emb2726 FAD6 HCF153 EMB2797 PGR3 AT4G32590 ATSDX1 ATH1 AtGLDP1 FAB1A ATHDA14 ATOST1 AT4G34090 SEP1 CLB6 MRL1 AT4G34920 HCF244 MCA1 AT4G36390 AtGGPPS11 ACD2 SQE3 AtFBA2 AT4G39040 SHL1 ATSEC14 ATIPS1 SQD2 SBE2.2 54CP FD-GOGAT ATLDA KCS19 ACR12 AT5G04980 AtFAD8 ATEGY2 AT5G07020 ERL2 FTRA2 AT5G08415 AT5G08650 PI-4KBETA2 PMDH2 ATMIPS3 PAS2 AT5G10690 ATSPS2F PPD5 EMB3137 AT5G14410 AT5G14460 ATDEF2 AT5G14910 BCCP2 AT5G16240 BCCP PSY MEX1 AT5G17670 PCB2 AtHBP5 ATMGD2 ATCPN21 AT5G21100 AT5G21105 CaS HCF136 SQE5 ATSS1 ARRPS1 CAC2 AT5G40500 AOS NDH18 KCS20 ATFKBP13 CHL AT5G45950 KAS1 LIL3:2 FPS1 AMK2 AACT2 ADG1 KAT5 OVA2 AT5G51140 ATPGMP B2 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AHL RPL24 AT5G55220 ATPEX5 LUT2 PSD2 CER3 NdhN FOLK AtcPT4 CLB4 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AtTudor2 DXR ATNDPK2 ALX8 AT5G66470 ABA1 ACCD NDHE
GO:0009117 nucleotide metabolic process	BP	5.755e-66	AtFKGP GAE2 POR ATHM1 LIP2 emb2394 LPA19 ATPCNA1 AT1G07440 AXS2 PSAO ABC1 AVDE1 CRB ATGSTU18 ATFD1 AT1G12800 AT1G13730 PnsL2 AT1G14345 NDF1 AT1G16080 GLYR2 AT1G18060 NDF6 LHCA2*1 ATLFNR2 DRT112 ATNADK2 AT1G22630 AOR GlcNAc1pUT1 PRK ATNSI AT1G32470 AT1G36280 GAPB ATMCM2 FTSH1 GDC1 AT1G51110 ATMUM4 PSAG ATSCO1 AT1G62780 NRS/ER NDF2 AT1G65230 cICDH CER6 BIM2 FLN2 HEMB1 CRR23 AT1G70770 ATPIN1 ATKAS2 emb2184 LQY1 AtVAB1 AT1G76450 AtHMGR1 AT1G77090 ATRHM1 RPI2 AT2G07689 MCM4 ATHMA4 ALF1 LIP1 ATSULA AtFBA1 AT2G21960 SCPL8 NAPRT2 YCF37 PRPL35 AT2G27680 PY ATFC-II FTSH2 EDA3 GDCH AT2G35390 SKL2 ATE2FA AT2G36145 AGK1 AT2G43560 FAB2 ACS1 AT2G44920 PSAP ATCYP38 ATBCA1 ATRGP1 ATF1 ATGSTF11 EMB3119 PGK1 FLU ESM1 ATRHM3 ATHM4 MFP1 NDF4 ATCRSH AT3G23700 GAE6 HCF101 ATGHBDH LTA2 ATSKL1 ATTSO2 PTAC16 DUT1 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 GMD2 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G56010 AT3G59040 PIF5 GUN4 AT3G59780 AT3G61870 CYP20-3 CSP41A AtcpRRF EMB3126 ATCCD1 ANTR2 AT4G00560 AT4G00895 TROL AT-RSH1 AT4G02530 PETC ATPC1 APX4 ATPD CYP83A1 AtCLA1 LIL3:1 AK-HSDH PGR5-LIKE AT4G25280 AtFBA7 AtFBA5 AT4G28740 AT4G29120 AHA2 GAE1 FAD6 PGR3 PDE334 ATH1 AtGLDP1 ATHDA14 AtHMAC6 AT4G34090 SEP1 ASE2 ACD2 AtVAB2 AtFBA2 VHA-A3 ATPDX1 SBE2.2 ATLDA AT5G05180 2-Cys AT5G08050 PDE340 AT5G08650 PMDH2 ATNADP-ME2 SIG4 AO AT5G14910 ENH1 MEX1 PCB2 ADG2 ATHMA8 CaS HCF136 PGL5 PYR6 GME ARRPS1 AT5G35170 ATGSL1 atylmg3 UDG4 FTSH5 AOS AT5G44520 AtNUDT11 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AMK2 ADG1 HINT3 OLD5 AT5G50370 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 AHA3 NdhN ATUXS3 CLB4 PNM1 AtTudor2 AHA11 DXR ATNDPK2 PSAN ATLFNR1 ATPA ATPF ATPH ATPI ATPE ATPB NDHB.1 NDHF NDHD NDHE NDHB.2 ATP6 NAD5
GO:0043623 cellular protein complex assembly	BP	1.022e-65	LPA1 FZL PSB27 POR ATHM1 TOR2 AT1G05140 AT1G05150 emb2394 LPA19 OE23 PSAO CRB CLPP6 ATSRS GAPA-2 AT1G14270 AT1G14345 CYCA2;3 NDF1 HCF173 ARF5 TUB5 ATLFNR2 ATSCAR3 AT1G29700 PRK AT1G32470 RPL21C PMI1 GAPB CP22 Lhca5 AT1G49380 TUA2 AT1G50660 AT1G52220 PSAH-2 ATBG1 AtTLP18.3 ATDEK1 CCB4 ABC4 AtNIK3 ATFD2 ATSCO1 AT1G64355 TUA1 Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication). cICDH AT1G67700 PSBY ATHPR1 AT1G68110 AT1G69420 AtCPB LPA3 IQD31 NDH-O emb2184 LQY1 ATCLV1 AtVAB1 PSBR APG2 ATMAP65-6 STI AT2G04280 OTP51 ATGLK1 PSB29 AtFBA1 IAA8 AT2G25430 AT2G26500 AT2G26730 VHA-A1 ALB3 ATEXP6 TUB7 ATVLN1 PBCP KIS PSBW FTSH2 ARASP ATRANGAP2 AIR9 ATHB-14 GDCH SKL2 ATFTSZ2-1 ABCB1 AtAUX1 ATSCAR2 MAP65-5 PnsL1 AT2G43030 BIO2 AT2G43560 AT2G43945 AT2G45990 PSAP AtTic20-II CRR6 ATCYP38 SCPL27 AT3G08680 ABCI6 HCF243 PSAH-1 ATKINESIN-13A HCF107 AT3G17340 EMB1270 PSBTN ATTSO1 PLSP1 AFH1 ATGHBDH AtCHUP1 LTA2 GAPA CCB1 AT3G43610 AT3G45850 AT3G47650 OEC33 FTSZ2-2 HCEF1 PPL1 SBPASE ACSF PrfB3 GUN4 AT3G60320 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. CDS5 AT3G61870 CSP41A TROL ABC1 PSAD-1 PETC ATPC1 ATK5 AT4G08280 ATPD PSAL ATSAHH1 TUA6 AFH3 PPD1 SPK1 LIL3:1 PSBQ PGR5-LIKE ARC1 ACP4 MAP65-2 PSB28 PSAE-1 ATPAO5 AT4G30020 VEL1 HCF153 PDE334 LUG ATHB-8 SEP1 SLP2 HCF244 MCA1 NDH-M AtVAB2 AtFBA2 VHA-A3 SAMC1 OHP 54CP AT5G06970 AT5G08390 PMDH2 AT5G10020 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 ATCYP20-2 CRN EMB3136 CCS52B AT5G13980 ENH1 ATSRA1 EMB40 ATOEP80 TUA3 TUA5 CRR42 CaS HCF136 TUB8 ATSIG5 AT5G27560 AMOS1 atylmg3 ATPRFB AT5G38520 CRR7 ATUBC8 ATGLK2 TUB4 Encodes the mitochondrial ATP synthase subunit delta. LPA66 AT5G50180 AT5G50420 AT5G51110 LPA2 EXL3 CRR1 CCB2 AT5G52780 AT5G52960 CcdA ATMAP65-1 GDPDL4 NPL1 NdhN AT5G58330 GIL1 TUB3 BAM1 ATLFNR1 MSP-1 ICU2 PSBA PSBK PSBI ATPH PSBD PSBC YCF3 NDHJ NDHC YCF4 PETA PSBL PSBF PETG RPS18 PSBB PSBN PSBH PETD YCF5 NDHI NDHA
GO:0006753 nucleoside phosphate metabolic process	BP	1.630e-65	AtFKGP GAE2 POR ATHM1 LIP2 emb2394 LPA19 ATPCNA1 AT1G07440 AXS2 PSAO ABC1 AVDE1 CRB ATGSTU18 ATFD1 AT1G12800 AT1G13730 PnsL2 AT1G14345 NDF1 AT1G16080 GLYR2 AT1G18060 NDF6 LHCA2*1 ATLFNR2 DRT112 ATNADK2 AT1G22630 AOR GlcNAc1pUT1 PRK ATNSI AT1G32470 AT1G36280 GAPB ATMCM2 FTSH1 GDC1 AT1G51110 ATMUM4 PSAG ATSCO1 AT1G62780 NRS/ER NDF2 AT1G65230 cICDH CER6 BIM2 FLN2 HEMB1 CRR23 AT1G70770 ATPIN1 ATKAS2 emb2184 LQY1 AtVAB1 AT1G76450 AtHMGR1 AT1G77090 ATRHM1 RPI2 AT2G07689 MCM4 ATHMA4 ALF1 LIP1 ATSULA AtFBA1 AT2G21960 SCPL8 NAPRT2 YCF37 PRPL35 AT2G27680 PY ATFC-II FTSH2 EDA3 GDCH AT2G35390 SKL2 ATE2FA AT2G36145 AGK1 AT2G43560 FAB2 ACS1 AT2G44920 PSAP ATCYP38 ATBCA1 ATRGP1 ATF1 ATGSTF11 EMB3119 PGK1 FLU ESM1 ATRHM3 ATHM4 MFP1 NDF4 ATCRSH AT3G23700 GAE6 HCF101 ATGHBDH LTA2 ATSKL1 ATTSO2 PTAC16 DUT1 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 GMD2 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G56010 AT3G59040 PIF5 GUN4 AT3G59780 AT3G61870 CYP20-3 CSP41A AtcpRRF EMB3126 ATCCD1 ANTR2 AT4G00560 AT4G00895 TROL AT-RSH1 AT4G02530 PETC ATPC1 APX4 ATPD CYP83A1 AtCLA1 LIL3:1 AK-HSDH PGR5-LIKE AT4G25280 AtFBA7 AtFBA5 AT4G28740 AT4G29120 AHA2 GAE1 FAD6 PGR3 PDE334 ATH1 AtGLDP1 ATHDA14 AtHMAC6 AT4G34090 SEP1 ASE2 ACD2 AtVAB2 AtFBA2 VHA-A3 ATPDX1 SBE2.2 ATLDA AT5G05180 2-Cys AT5G08050 PDE340 AT5G08650 PMDH2 ATNADP-ME2 SIG4 AO AT5G14910 ENH1 MEX1 PCB2 ADG2 ATHMA8 CaS HCF136 PGL5 PYR6 GME ARRPS1 AT5G35170 ATGSL1 atylmg3 UDG4 FTSH5 AOS AT5G44520 AtNUDT11 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AMK2 ADG1 HINT3 OLD5 AT5G50370 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 AHA3 NdhN ATUXS3 CLB4 PNM1 AtTudor2 AHA11 DXR ATNDPK2 PSAN ATLFNR1 ATPA ATPF ATPH ATPI ATPE ATPB NDHB.1 NDHF NDHD NDHE NDHB.2 ATP6 NAD5
GO:0019362 pyridine nucleotide metabolic process	BP	8.821e-65	POR ATHM1 LIP2 emb2394 LPA19 AT1G07440 PSAO ABC1 AVDE1 CRB ATGSTU18 ATFD1 AT1G12800 PnsL2 AT1G14345 NDF1 AT1G16080 GLYR2 AT1G18060 NDF6 LHCA2*1 ATLFNR2 DRT112 ATNADK2 AT1G22630 PRK ATNSI AT1G32470 GAPB FTSH1 GDC1 AT1G51110 PSAG ATSCO1 AT1G62780 NDF2 AT1G65230 cICDH HEMB1 CRR23 AT1G70770 emb2184 LQY1 AT1G76450 AT1G77090 RPI2 ALF1 ATSULA AtFBA1 AT2G21960 NAPRT2 YCF37 PRPL35 AT2G27680 PY ATFC-II FTSH2 EDA3 GDCH AT2G36145 AT2G43560 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATGSTF11 EMB3119 PGK1 ESM1 ATHM4 MFP1 NDF4 AT3G23700 HCF101 ATGHBDH PTAC16 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G56010 AT3G59040 GUN4 AT3G59780 AT3G61870 CSP41A AtcpRRF EMB3126 ATCCD1 ANTR2 AT4G02530 PETC APX4 ATPD CYP83A1 LIL3:1 PGR5-LIKE AtFBA7 AtFBA5 AT4G28740 AT4G29120 PGR3 PDE334 AtGLDP1 ATHDA14 AT4G34090 SEP1 ACD2 AtVAB2 AtFBA2 ATPDX1 SBE2.2 ATLDA 2-Cys AT5G08050 AT5G08650 PMDH2 ATNADP-ME2 SIG4 AO AT5G14910 ENH1 MEX1 PCB2 ADG2 CaS HCF136 PGL5 ARRPS1 ATGSL1 atylmg3 FTSH5 AT5G44520 Encodes the mitochondrial ATP synthase subunit delta. ADG1 OLD5 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 NdhN CLB4 AtTudor2 DXR PSAN ATLFNR1
GO:0072524 pyridine-containing compound metabolic p...	BP	9.845e-65	POR ATHM1 LIP2 emb2394 LPA19 AT1G07440 PSAO ABC1 AVDE1 CRB ATGSTU18 ATFD1 AT1G12800 PnsL2 AT1G14345 NDF1 AT1G16080 GLYR2 AT1G18060 NDF6 LHCA2*1 ATLFNR2 DRT112 ATNADK2 AT1G22630 PRK ATNSI AT1G32470 GAPB FTSH1 GDC1 AT1G51110 PSAG ATSCO1 AT1G62780 NDF2 AT1G65230 cICDH HEMB1 CRR23 AT1G70770 emb2184 LQY1 AT1G76450 AT1G77090 RPI2 ALF1 ATSULA AtFBA1 AT2G21960 NAPRT2 YCF37 PRPL35 AT2G25830 AT2G27680 PY ATFC-II FTSH2 EDA3 GDCH AT2G36145 PDX1L4 ATPDX1.1 AT2G43560 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATGSTF11 EMB3119 PGK1 ESM1 ATHM4 MFP1 NDF4 AT3G23700 HCF101 ATGHBDH PTAC16 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G56010 AT3G59040 GUN4 AT3G59780 AT3G61870 CSP41A AtcpRRF EMB3126 ATCCD1 ANTR2 AT4G02530 PETC APX4 ATPD CYP83A1 LIL3:1 PGR5-LIKE AtFBA7 AtFBA5 AT4G28740 AT4G29120 PGR3 PDE334 AtGLDP1 ATHDA14 AT4G34090 SEP1 ACD2 AtVAB2 AtFBA2 ATPDX1 SBE2.2 ATLDA 2-Cys AT5G08050 AT5G08650 PMDH2 ATNADP-ME2 SIG4 AO AT5G14910 ENH1 MEX1 PCB2 ADG2 CaS HCF136 PGL5 ARRPS1 ATGSL1 atylmg3 FTSH5 AT5G44520 Encodes the mitochondrial ATP synthase subunit delta. ADG1 ATPPOX OLD5 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 NdhN ATPDX2 CLB4 AtTudor2 DXR PSAN ATLFNR1
GO:1901605 alpha-amino acid metabolic process	BP	1.651e-64	AT1G01630 AtSAM1 POR LIP2 AT1G05150 ATCTL1 OE23 EMB2784 ADT6 PSAO AVDE1 AT1G09310 AtHIR1 ACLA-1 ADT1 ATGLX1 AT1G11860 ATSRS ELP AT1G12800 AFB3 PSS1 AT1G15710 CP24 ATSOT17 DRT112 AOAT1 AOR UGT74B1 ASB1 PSAK AK-HSDH PSAF ATROPGEF14 AT1G31710 ACBP PRK AT1G32470 AT1G33110 AT1G35420 SHM7 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 ACD1 AT1G51110 PSAH-2 AtTLP18.3 AT1G55260 AT1G55360 PSAG ATSERAT2;1 AT1G56190 ATATP-PRT1 AT1G60000 LHCA3 ACO2 FMO FMO GAD2 ATGSR2 AT1G66430 PSBY AT1G67950 ATHPR1 AT1G68260 CER6 AT1G70280 AOAT2 AT1G72500 AT1G72810 ATSOT18 ATSOT16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATKAS2 UMAMIT5 PETE1 ACR3 AT1G78040 ATGSTU20 ATGGH2 PSBR AT2G05920 AtOPR3 ATHNIR ADC1 AT2G19940 AAS ALF1 LIP1 PDTPI AtFBA1 AT2G22230 SCPL8 ATMES3 ALDH11A3 AT2G24580 AtGLDP2 AT2G26800 AT2G27680 ADT3 ADCS ATCOQ3 AT2G31670 GDCH SKL2 BLH1 ATPAL1 NATA1 PnsL1 ATKT2 AT2G42220 AT2G42690 ATLEUD1 FAB2 ACS1 MTHFR2 BGLU26 CHL-CPN10 CAO AtCGS1 AK3 ATMS2 EMB3119 ATCYSD1 AT3G07270 LHCB4.2 ADK1 OMR1 PAL4 ABCI6 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 ATSERAT2;2 FLU ATPME3 HEME1 ATHM4 JAL35 ECT6 MAT4 AT3G19480 BCAT4 CBB1 ADOF2 AT3G22520 APS1 ATSAHH2 GAE6 ATGHBDH LTA2 ATPRX AT3G26450 GAMMA-TIP2 ATSKL1 CAB4 GSA2 ATG4 AT3G52500 FTSZ2-2 ATPAL2 AtPIP2;1 AT3G54400 P5CS2 ATDFD SBPASE ACSF IPMI1 PIF5 GUN4 MTHFR1 AT3G60750 ARATH;BSAS3;1 CYP20-3 TROL AT4G01310 EOL1 PSAD-1 APR ATPC1 ARGAH2 LHCB5 CYP83A1 SHM4 AtCLA1 AK-HSDH PRXR1 ATSMO1-2 AT4G23670 CER2 MSRA4 ATK2 PSAE-1 GGP1 FAD6 ATH1 AtGLDP1 KUP5 AT4G33740 CCoAOMT1 SLP2 MCA1 AtPLT6 SHM1 AQI ROC1 ATPRP4 AtFBA2 ATIPS1 AKN2 CYP79B2 AT5G01020 AT5G01090 ATPAL3 SIR AT5G08430 AtPPa6 PMDH2 AST68 ASN3 PAS2 TUB6 DiT1 AT5G12970 ATCYP20-2 AT5G13140 AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 AT5G14500 GASA4 VAT1 ATCIMS PCB2 AT5G19940 ATCPN21 IMS3 CaS AT5G23820 ATCYSD2 DES1 AT5G34930 ATGSL1 AT5G36160 CAT3 AT5G41760 AOS AT5G44020 APE2 TET1 PYL1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. FRA1 AT5G48220 ATGH9A1 AT5G50000 AT5G51140 CRR1 GLT1 ATMAP65-1 ADCL CLB4 ATMYB34 PDCB1 DXR PSAN DCT ASN2 STR16 MSP-1 NDHE
GO:0034622 cellular macromolecular complex assembly	BP	1.808e-64	LPA1 FZL PSB27 POR ATHM1 TOR2 AT1G05140 AT1G05150 emb2394 LPA19 OE23 PSAO AT1G09200 CRB CLPP6 ATSRS GAPA-2 AT1G14270 AT1G14345 CYCA2;3 NDF1 HCF173 ARF5 TUB5 ATLFNR2 ATSCAR3 AT1G29700 PRK AT1G32470 RPL21C PMI1 GAPB CP22 Lhca5 AT1G49380 TUA2 AT1G50660 HTA10 AT1G52220 PSAH-2 ATBG1 AtTLP18.3 ATDEK1 CCB4 ABC4 AtNIK3 ATFD2 ATSCO1 AT1G64355 TUA1 Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication). cICDH AT1G67700 PSBY ATHPR1 AT1G68110 AT1G69420 AtCPB LPA3 IQD31 NDH-O emb2184 LQY1 ATCLV1 AtVAB1 PSBR APG2 ATMAP65-6 STI AT2G04280 OTP51 ATGLK1 PSB29 AtFBA1 IAA8 AT2G25430 AT2G26500 AT2G26730 VHA-A1 HIS4 ALB3 ATEXP6 TUB7 ATVLN1 PBCP KIS PSBW FTSH2 ARASP ATRANGAP2 AIR9 ATHB-14 GDCH SKL2 ATFTSZ2-1 ABCB1 AtAUX1 ATSCAR2 MAP65-5 PnsL1 AT2G42510 AT2G43030 BIO2 AT2G43560 AT2G43945 AT2G45990 PSAP AtTic20-II CRR6 ATCYP38 SCPL27 AT3G08680 ABCI6 HCF243 PSAH-1 ATKINESIN-13A HCF107 AT3G17340 EMB1270 PSBTN ATTSO1 PLSP1 AFH1 ATGHBDH AtCHUP1 LTA2 GAPA CCB1 AT3G43610 AT3G45850 AT3G45930 AT3G47650 OEC33 FTSZ2-2 HCEF1 PPL1 SBPASE ACSF PrfB3 GUN4 AT3G60320 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. CDS5 AT3G61870 CSP41A TROL ABC1 PSAD-1 PETC ATPC1 ATK5 AT4G08280 ATPD PSAL ATSAHH1 TUA6 AFH3 PPD1 SPK1 LIL3:1 PSBQ PGR5-LIKE ARC1 ACP4 MAP65-2 PSB28 PSAE-1 ATPAO5 AT4G30020 VEL1 HCF153 PDE334 LUG ATHB-8 SEP1 SLP2 HCF244 MCA1 NDH-M AtVAB2 AtFBA2 VHA-A3 SAMC1 OHP 54CP AT5G06970 AT5G08390 PMDH2 AT5G10020 AT5G10390 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 ATCYP20-2 CRN EMB3136 CCS52B AT5G13980 ENH1 ATSRA1 EMB40 ATOEP80 TUA3 TUA5 CRR42 H2B CaS HCF136 TUB8 ATSIG5 AT5G27560 AMOS1 atylmg3 ATPRFB AT5G38520 CRR7 ATUBC8 ATGLK2 TUB4 Encodes the mitochondrial ATP synthase subunit delta. LPA66 AT5G50180 AT5G50420 AT5G51110 LPA2 EXL3 CRR1 CCB2 AT5G52780 AT5G52960 CcdA ATMAP65-1 GDPDL4 NAP1;3 NPL1 NdhN AT5G58330 GIL1 AT5G59690 HTA6 AT5G59970 TUB3 AT5G65360 BAM1 ATLFNR1 MSP-1 ICU2 PSBA PSBK PSBI ATPH PSBD PSBC YCF3 NDHJ NDHC YCF4 PETA PSBL PSBF PETG RPS18 PSBB PSBN PSBH PETD YCF5 NDHI NDHA
GO:0046496 nicotinamide nucleotide metabolic proces...	BP	2.797e-64	POR ATHM1 LIP2 emb2394 LPA19 AT1G07440 PSAO ABC1 AVDE1 CRB ATGSTU18 ATFD1 AT1G12800 PnsL2 AT1G14345 NDF1 AT1G16080 GLYR2 AT1G18060 NDF6 LHCA2*1 ATLFNR2 DRT112 AT1G22630 PRK ATNSI AT1G32470 GAPB FTSH1 GDC1 AT1G51110 PSAG ATSCO1 AT1G62780 NDF2 AT1G65230 cICDH HEMB1 CRR23 AT1G70770 emb2184 LQY1 AT1G76450 AT1G77090 RPI2 ALF1 ATSULA AtFBA1 AT2G21960 NAPRT2 YCF37 PRPL35 AT2G27680 PY ATFC-II FTSH2 EDA3 GDCH AT2G36145 AT2G43560 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATGSTF11 EMB3119 PGK1 ESM1 ATHM4 MFP1 NDF4 AT3G23700 HCF101 ATGHBDH PTAC16 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G56010 AT3G59040 GUN4 AT3G59780 AT3G61870 CSP41A AtcpRRF EMB3126 ATCCD1 ANTR2 AT4G02530 PETC APX4 ATPD CYP83A1 LIL3:1 PGR5-LIKE AtFBA7 AtFBA5 AT4G28740 AT4G29120 PGR3 PDE334 AtGLDP1 ATHDA14 AT4G34090 SEP1 ACD2 AtVAB2 AtFBA2 ATPDX1 SBE2.2 ATLDA 2-Cys AT5G08050 AT5G08650 PMDH2 ATNADP-ME2 SIG4 AO AT5G14910 ENH1 MEX1 PCB2 ADG2 CaS HCF136 PGL5 ARRPS1 ATGSL1 atylmg3 FTSH5 AT5G44520 Encodes the mitochondrial ATP synthase subunit delta. ADG1 OLD5 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 NdhN CLB4 AtTudor2 DXR PSAN ATLFNR1
GO:0009314 response to radiation	BP	3.095e-64	LHY KCS1 ATGPAT4 AT1G02110 POR AT1G04040 KCS2 AT1G04430 AT1G04680 ATGLR3.4 5PTASE13 BT3 ATCTL1 encodes a flavonol-7-O-rhamnosyltransferase involved in the formation of rhamnosylated flavonols BBX24 OE23 ATNDI1 SR45a AtRLP1 ATRAB-A2B KCS3 ADT6 ABC1 AVDE1 AtMYB60 CRB ATGSTU17 ACLA-1 CBRLK1 ADT1 ELP PHR1 AFB3 AT1G14200 PKS2 SBH2 CP24 ACR11 ATEGY3 LHCA2*1 ARAC4 DRT112 AT1G20870 FB AOR CER60 ABCB13 ABCB14 AB165 AT1G30440 FEI1 ACBP PRK OHP2 ATNR2 GAPB CP22 mtLPD1 AT1G50280 AT1G51200 AT1G51400 4CL.1 TSA1 FRS6 SPA4 AT1G54050 AtTLP18.3 AT1G56500 AtHEMA1 ATFD2 ATGPT2 RPOD1 4CL3 AT1G66080 PMI2 DIN9 RBCS1A CSK ATHPR1 CER6 AT-EXP1 SHW1 SNL4 PG2 MMZ2 AT1G72270 ATPIN1 AT1G73650 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. BBX16 SPPA ATHSP101 QKY ATKAS2 UMAMIT5 AtGH9B7 AT1G76450 AT1G76570 LAX3 RAP2.4 ATGSTU20 ATRHM1 PSBR RGA LHCB2 PGR5 EXGT-A1 KCS9 ATGLR2 HY3 AT2G19310 ATCLASP AtFBA1 ATRL2 SEP2 AT2G22230 ATIPS2 AT2G23390 AFR AT2G25530 ATHSFA2 FDH AR781 KCS11 ATCDPMEK ADT3 AT2G28200 ANTR1 PBCP ATC4H FTSH2 BBX25 ATGLR3.7 ATCOP1 ATSUVH2 ABR ATHB-14 FEI2 BLH1 ABCB1 ATSIG6 ATPAL1 ATEXP3 LCD1 AtAUX1 ATPDX1.1 RDO2 RCA LHCB4.3 AT2G42690 SPA1 AtGH3.11 ROPGAP3 PIL1 AtGolS1 CAO ATMYB12 ATHB-1 MEE31 AT3G03770 FRS7 AT3G08640 AT3G08660 LHCB4.2 Fes1A AT3G09440 AT3G12050 ATHSP70 DRT100 AT3G13510 FLU AT3G15570 ADS3 AT3G16370 AT3G16850 HYH mRNA level of the MEB5.2 gene (At3g17800) remains unchanged after cutting the inflorescence stem ACT2 BCAT4 CBB1 AT3G19850 AtBBX32 4CL2 UGT84A2 AT3G22104 ATWNK2 ATTSO1 ELIP bHLH34 AT3G24190 ATFKBP62 AFH1 AT3G26490 GAMMA-TIP2 GAPA ATICE1 LHCB2 ABCB15 ABCB19 ATJ AT3G44820 JK224 PTAC16 AT3G47070 ATATM DIN11 BAM2 OEC33 AT3G50840 GATA6 F3'H ATGLR3.6 ATWNK5 AT3G52740 HCEF1 LHCA1 PMR6 A11 ACSF AT3G57020 PIF5 ACR4 AT3G60320 SDR1 CYP20-3 CP12 CSP41A BRCA2(IV) EDA8 AHDP TROL AGY1 ATXT2 AFB1 PETC APX4 ATDET1 LHCB5 SPA2 Hop3 SKU5 CYP83A1 The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. ELIP2 AT4G15430 UGT84A1 AT4G15545 AtCLA1 ATVAMP724 PHYD ATOPT3 LIL3:1 PHYE KAT2 Encodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death. BAM3 PSBQ sks4 PGR5-LIKE CRR31 ACP4 MSRA4 ABCB2 CGA1 CIP7 VEL1 FAD6 ENP ATSDX1 ATH1 AT4G33500 SEP1 ATCAP1 CAT2 HCF244 ATGLR3.2 CYP84A1 GATA7 MEL1 SQE3 SHM1 ATROPGEF1 ATMYB4 ROC1 AT5G01090 ATPDX1 LHCB4.1 OHP ABCI20 AtNCS1 FD-GOGAT KCS19 ATCESA3 AtCHIL FTIP1 CYP75B1 AT5G08430 ATFLS1 AT5G08650 NDC1 PMDH2 PAS2 HY5 TUB6 AT5G13140 SIG4 ATCHS LNG1 AT5G15950 AtNIK1 BCCP UGT78D2 ENH1 ATOBGC ADG2 AT5G19730 CaS HCF136 EFO2 ATSIG5 CRY3 AMOS1 CAC2 ATGSL1 PMI15 RBCS3B RBCS2B RBCS1B FTSH5 AOS KCS20 ABCI21 APE2 AT5G47800 PAT1 ADG1 ATFKBP65 KAT5 HRB1 ATGH9A1 cpHsc70-2 EFO1 ATHS83 AT5G54660 THI1 GATA21 APO2 NPL1 DDB2 GIL1 CLB4 COB PNM1 PIF7 AT5G62210 DXR ATNDPK2 ALX8 JK218 CESA6 BAM1 AT5G66560 MSP-1 ABA1 AT5G67385
GO:0019344 cysteine biosynthetic process	BP	8.865e-64	AT1G01630 AtSAM1 POR ATCTL1 OE23 EMB2784 PSAO AT1G09310 AtHIR1 ACLA-1 ATGLX1 AT1G11860 ELP AT1G12800 CP24 ATSOT17 DRT112 AOAT1 PSAK PSAF ATROPGEF14 ACBP PRK AT1G32470 AT1G33110 AT1G35420 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 PSAH-2 AtTLP18.3 AT1G55260 AT1G55360 PSAG ATSERAT2;1 AT1G56190 ATATP-PRT1 AT1G60000 LHCA3 ACO2 FMO AT1G66430 PSBY AT1G67950 ATHPR1 AT1G68260 AT1G72500 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PETE1 ACR3 AT1G78040 PSBR ATHNIR ALF1 LIP1 PDTPI AtFBA1 AT2G22230 SCPL8 ATMES3 ALDH11A3 AT2G31670 GDCH SKL2 BLH1 PnsL1 AT2G42220 AT2G42690 ATLEUD1 ACS1 CAO EMB3119 ATCYSD1 LHCB4.2 ADK1 ABCI6 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 ATSERAT2;2 FLU JAL35 BCAT4 CBB1 ADOF2 ATSAHH2 ATGHBDH ATPRX AT3G26450 GAMMA-TIP2 ATSKL1 CAB4 GSA2 ATG4 FTSZ2-2 AtPIP2;1 AT3G54400 SBPASE ACSF PIF5 GUN4 AT3G60750 ARATH;BSAS3;1 CYP20-3 TROL AT4G01310 PSAD-1 APR ATPC1 LHCB5 CYP83A1 AtCLA1 PRXR1 ATSMO1-2 AT4G23670 CER2 PSAE-1 AtGLDP1 KUP5 CCoAOMT1 MCA1 AQI ROC1 ATPRP4 AtFBA2 CYP79B2 AT5G01090 SIR AtPPa6 AST68 PAS2 TUB6 ATCYP20-2 AT5G13140 AT5G13980 AT5G14120 GASA4 PCB2 AT5G19940 ATCPN21 IMS3 CaS ATCYSD2 DES1 ATGSL1 AT5G44020 APE2 TET1 ATGH9A1 AT5G50000 ATMAP65-1 PSAN ASN2 MSP-1
GO:0008652 cellular amino acid biosynthetic process	BP	1.104e-63	AT1G01630 AtSAM1 POR LIP2 AT1G05150 ATCTL1 OE23 EMB2784 ADT6 PSAO AVDE1 AT1G09310 AtHIR1 ACLA-1 CLPP6 ADT1 ATGLX1 AT1G11860 ATSRS ELP AT1G12800 AFB3 PSS1 AT1G15710 CP24 ATSOT17 DRT112 AOAT1 AOR ASB1 PSAK AK-HSDH PSAF ATROPGEF14 ACBP PRK AT1G32470 AT1G33110 AT1G35420 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 AT1G51110 PSAH-2 AtTLP18.3 AT1G55260 AT1G55360 PSAG ATSERAT2;1 AT1G56190 ATATP-PRT1 AT1G60000 LHCA3 ACO2 FMO ATGSR2 AT1G66430 PSBY AT1G67950 ATHPR1 AT1G68260 CER6 AT1G70280 AOAT2 AT1G72500 AT1G72810 LPA3 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATKAS2 PETE1 ACR3 AT1G78040 PSBR AT2G05920 ATHNIR AT2G19940 ALF1 LIP1 PDTPI AtFBA1 AT2G22230 AAT SCPL8 ATMES3 AT2G24060 ALDH11A3 AT2G25830 AT2G27680 ADT3 ADCS ATCOQ3 AT2G31670 GDCH SKL2 BLH1 PnsL1 ATKT2 AT2G42220 AT2G42690 ATLEUD1 FAB2 ACS1 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis CAO CRR6 AtCGS1 AK3 ATMS2 EMB3119 ATCYSD1 AT3G07270 LHCB4.2 ADK1 OMR1 ABCI6 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 ATSERAT2;2 FLU JAL35 ECT6 AT3G19480 BCAT4 CBB1 ADOF2 AT3G22520 ATSAHH2 ATGHBDH LTA2 ATPRX AT3G26450 GAMMA-TIP2 ATSKL1 ATCM1 CAB4 AHAS GSA2 AT3G51140 ATG4 FTSZ2-2 AtPIP2;1 AT3G54400 P5CS2 ATDFD SBPASE ACSF IPMI1 PIF5 GUN4 AT3G60750 ARATH;BSAS3;1 CYP20-3 AtcpRRF EMB3126 TROL AT4G01310 EOL1 PSAD-1 APR ATPC1 LHCB5 CYP83A1 AtCLA1 AK-HSDH PRXR1 ATSMO1-2 AT4G23670 CER2 ATRBP31 ATK2 PSAE-1 FAD6 ATH1 AtGLDP1 KUP5 AT4G33740 CCoAOMT1 SLP2 MCA1 AT4G36390 AQI ROC1 ATPRP4 AtFBA2 AT4G39040 ATSK2 ATIPS1 CYP79B2 DHS1 AT5G01020 AT5G01090 SIR AT5G08430 AtPPa6 PMDH2 AST68 ASN3 PAS2 TUB6 AT5G12970 ATCYP20-2 AT5G13140 AT5G13980 CARAB-AK-LYS AT5G14120 ATIMD1 AT5G14500 GASA4 VAT1 ATCIMS PCB2 AT5G19940 ATCPN21 AT5G22340 IMS3 CaS ATCYSD2 DES1 AT5G34930 ATGSL1 AT5G36160 AT5G41760 AOS AT5G44020 APE2 AT5G46580 TET1 FRA1 ATGH9A1 AT5G50000 AT5G51110 AT5G51140 CRR1 AT5G52960 GLT1 ATMAP65-1 ADCL APO2 CLB4 ATMYB34 PDCB1 DXR PSAN ASN2 MSP-1 NDHE"
GO:0006534 cysteine metabolic process	BP	2.026e-63	AT1G01630 AtSAM1 POR ATCTL1 OE23 EMB2784 PSAO AT1G09310 AtHIR1 ACLA-1 ATGLX1 AT1G11860 ELP AT1G12800 CP24 ATSOT17 DRT112 AOAT1 PSAK PSAF ATROPGEF14 ACBP PRK AT1G32470 AT1G33110 AT1G35420 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 ACD1 PSAH-2 AtTLP18.3 AT1G55260 AT1G55360 PSAG ATSERAT2;1 AT1G56190 ATATP-PRT1 AT1G60000 LHCA3 ACO2 FMO AT1G66430 PSBY AT1G67950 ATHPR1 AT1G68260 AT1G72500 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PETE1 ACR3 AT1G78040 PSBR ATHNIR ALF1 LIP1 PDTPI AtFBA1 AT2G22230 SCPL8 ATMES3 ALDH11A3 AT2G31670 GDCH SKL2 BLH1 PnsL1 AT2G42220 AT2G42690 ATLEUD1 ACS1 CAO EMB3119 ATCYSD1 LHCB4.2 ADK1 ABCI6 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 ATSERAT2;2 FLU JAL35 BCAT4 CBB1 ADOF2 ATSAHH2 ATGHBDH ATPRX AT3G26450 GAMMA-TIP2 ATSKL1 CAB4 GSA2 ATG4 FTSZ2-2 AtPIP2;1 AT3G54400 SBPASE ACSF PIF5 GUN4 AT3G60750 ARATH;BSAS3;1 CYP20-3 TROL AT4G01310 PSAD-1 APR ATPC1 LHCB5 CYP83A1 AtCLA1 PRXR1 ATSMO1-2 AT4G23670 CER2 PSAE-1 AtGLDP1 KUP5 CCoAOMT1 MCA1 AQI ROC1 ATPRP4 AtFBA2 CYP79B2 AT5G01090 SIR AtPPa6 AST68 PAS2 TUB6 ATCYP20-2 AT5G13140 AT5G13980 AT5G14120 GASA4 PCB2 AT5G19940 ATCPN21 IMS3 CaS ATCYSD2 DES1 ATGSL1 AT5G44020 APE2 TET1 ATGH9A1 AT5G50000 ATMAP65-1 PSAN ASN2 MSP-1
GO:0071822 protein complex subunit organization	BP	2.173e-63	LPA1 FZL PSB27 POR ATHM1 TOR2 AT1G05140 AT1G05150 emb2394 LPA19 OE23 PSAO ATSYP111 AT1G09200 CRB CLPP6 ATSRS GAPA-2 AT1G14270 AT1G14345 CYCA2;3 NDF1 HCF173 ARF5 TUB5 ATLFNR2 ARAC4 ATSCAR3 AT1G29700 PRK AT1G32470 RPL21C PMI1 GAPB CP22 Lhca5 AT1G49380 TUA2 AT1G50660 HTA10 AT1G52220 PSAH-2 ATBG1 ATMPK18 AtTLP18.3 ANP2 ATDEK1 CCB4 AT1G59860 ABC4 AtNIK3 ATFD2 ATSCO1 AT1G64355 AT1G64500 TUA1 Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication). cICDH AT1G67700 PSBY ATHPR1 AT1G68110 AT1G69420 AtCPB LPA3 IQD31 NDH-O emb2184 LQY1 ATCLV1 AtVAB1 PSBR ATNADP-ME4 AAA1 APG2 ATMAP65-6 STI AT2G04280 OTP51 ARAC1 ATCLASP ATGLK1 PSB29 AtFBA1 IAA8 AT2G25430 AT2G26500 AT2G26730 SCAB1 AGO4 VHA-A1 HIS4 ALB3 ATEXP6 TUB7 ATVLN1 PBCP KIS PSBW FTSH2 ARASP ATRANGAP2 AIR9 ATHB-14 GDCH SKL2 ATFTSZ2-1 ABCB1 AtAUX1 ATSCAR2 MAP65-5 PnsL1 ATVLN2 AT2G43030 BIO2 AT2G43560 AT2G43945 PLIM2a AT2G45990 PSAP AtTic20-II CRR6 ATCYP38 SCPL27 AT3G08680 ABCI6 HCF243 PSAH-1 ATKINESIN-13A HCF107 AT3G17340 EMB1270 PSBTN ATTSO1 ATTOPII PLSP1 AFH1 ATGHBDH AtCHUP1 LTA2 GAPA CCB1 AT3G43610 AT3G45850 AT3G45930 AT3G47650 OEC33 FTSZ2-2 HCEF1 PPL1 SBPASE ACSF PrfB3 ATVLN3 GUN4 AT3G60320 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. CDS5 MAP65-4 AT3G61870 ATL5 APG3 CSP41A TROL ABC1 PSAD-1 PETC ATPC1 ATK5 AT4G08280 ATPD PSAL ATSAHH1 KINESIN-12A APS3 TUA6 AFH3 PPD1 AT4G15830 SPK1 LIL3:1 PSBQ PGR5-LIKE ARC1 ACP4 MAP65-2 PSB28 PSAE-1 ATPAO5 AT4G30020 ATVLN4 VEL1 HCF153 PDE334 LUG ATHB-8 SEP1 SLP2 HCF244 MCA1 ARAC6 NDH-M AtVAB2 AtFBA2 VHA-A3 SAMC1 OHP 54CP NEDD1 AT5G06970 AT5G08390 PMDH2 AT5G10020 AT5G10390 AtMYB3R4 ATNADP-ME2 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 ATCYP20-2 CRN EMB3136 CCS52B AT5G13980 ENH1 ATSRA1 EMB40 ATOEP80 TUA3 TUA5 CRR42 H2B CaS HCF136 TUB8 AT5G23910 ATSIG5 AT5G27560 AMOS1 atylmg3 ATPRFB AT5G38520 CRR7 ATUBC8 ATGLK2 TUB4 Encodes the mitochondrial ATP synthase subunit delta. LPA66 ATGH9A1 AT5G50180 AT5G50420 AT5G51110 LPA2 EXL3 CRR1 CCB2 AT5G52780 AT5G52960 CcdA ATMAP65-1 GDPDL4 ATKCO1 NAP1;3 NPL1 AT5G58160 NdhN AT5G58330 GIL1 AT5G59690 HTA6 AT5G59970 TUB3 CESA6 AT5G65360 BAM1 ATLFNR1 MSP-1 ICU2 PSBA PSBK PSBI ATPH PSBD PSBC YCF3 NDHJ NDHC YCF4 PETA PSBL PSBF PETG RPS18 PSBB PSBN PSBH PETD YCF5 NDHI NDHA
GO:0070271 protein complex biogenesis	BP	3.189e-63	LPA1 FZL PSB27 POR ATHM1 TOR2 AT1G05140 AT1G05150 emb2394 LPA19 OE23 PSAO ATSYP111 AT1G09200 CRB CLPP6 ATSRS GAPA-2 AT1G14270 AT1G14345 CYCA2;3 NDF1 HCF173 ARF5 TUB5 ATLFNR2 ATSCAR3 AT1G29700 PRK AT1G32470 RPL21C PMI1 GAPB CP22 Lhca5 AT1G49380 TUA2 AT1G50660 HTA10 AT1G52220 PSAH-2 ATBG1 AtTLP18.3 ATDEK1 CCB4 AT1G59860 ABC4 AtNIK3 ATFD2 ATSCO1 AT1G64355 TUA1 Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication). cICDH RBCS1A AT1G67700 PSBY ATHPR1 AT1G68110 AT1G69420 AtCPB LPA3 IQD31 NDH-O emb2184 LQY1 ATCLV1 AtVAB1 PSBR ATNADP-ME4 APG2 ATMAP65-6 STI AT2G04280 OTP51 ATGLK1 PSB29 AtFBA1 IAA8 AT2G25430 AT2G26500 AT2G26730 AGO4 VHA-A1 HIS4 ALB3 ATEXP6 TUB7 ATVLN1 PBCP KIS PSBW FTSH2 ARASP ATRANGAP2 AIR9 ATHB-14 GDCH SKL2 ATFTSZ2-1 ABCB1 AtAUX1 ATSCAR2 MAP65-5 PnsL1 AT2G43030 BIO2 AT2G43560 AT2G43945 AT2G45990 PSAP AtTic20-II CRR6 ATCYP38 SCPL27 AT3G08680 ABCI6 HCF243 PSAH-1 ATKINESIN-13A HCF107 AT3G17340 EMB1270 PSBTN ATTSO1 ATTOPII PLSP1 AFH1 ATGHBDH AtCHUP1 LTA2 GAPA CCB1 AT3G43610 AT3G45850 AT3G45930 AT3G47650 OEC33 FTSZ2-2 HCEF1 PPL1 SBPASE ACSF PrfB3 GUN4 AT3G60320 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. CDS5 MAP65-4 AT3G61870 ATL5 CSP41A TROL ABC1 PSAD-1 PETC ATPC1 ATK5 AT4G08280 ATPD PSAL ATSAHH1 KINESIN-12A APS3 TUA6 AFH3 PPD1 AT4G15830 SPK1 LIL3:1 PSBQ PGR5-LIKE ARC1 ACP4 MAP65-2 PSB28 PSAE-1 ATPAO5 AT4G30020 VEL1 HCF153 PDE334 LUG ATHB-8 SEP1 SLP2 HCF244 MCA1 NDH-M AtVAB2 AtFBA2 VHA-A3 SAMC1 OHP 54CP AT5G06970 AT5G08390 PMDH2 AT5G10020 AT5G10390 AtMYB3R4 ATNADP-ME2 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 ATCYP20-2 CRN EMB3136 CCS52B AT5G13980 ENH1 ATSRA1 EMB40 ATOEP80 TUA3 TUA5 CRR42 H2B CaS HCF136 TUB8 AT5G23910 ATSIG5 AT5G27560 AMOS1 atylmg3 ATPRFB RBCS3B AT5G38520 CRR7 ATUBC8 ATGLK2 TUB4 Encodes the mitochondrial ATP synthase subunit delta. LPA66 AT5G50180 AT5G50420 AT5G51110 LPA2 EXL3 CRR1 CCB2 AT5G52780 AT5G52960 CcdA ATMAP65-1 GDPDL4 ATKCO1 NAP1;3 NPL1 NdhN AT5G58330 GIL1 AT5G59690 HTA6 AT5G59970 TUB3 AT5G65360 BAM1 ATLFNR1 MSP-1 ICU2 PSBA PSBK PSBI ATPH PSBD PSBC YCF3 NDHJ NDHC YCF4 PETA PSBL PSBF PETG RPS18 PSBB PSBN PSBH PETD YCF5 NDHI NDHA
GO:0044723 single-organism carbohydrate metabolic p...	BP	6.992e-63	PDH-E1 AtFKGP ATGPAT4 AtSAM1 ATCSLD5 AtBE2 POR ATHM1 AT1G04040 AT1G04430 AT1G04680 TOR2 AT1G05170 5PTASE13 ATCTL1 BBX24 ATGSL07 AT1G06730 ATF2KP AT1G07280 AT1G07440 AT1G08280 CRB AT1G09440 iPGAM1 ACLA-1 AT1G10740 ATSS3 ATGLX1 ELP AT1G12800 GAPA-2 GATL3 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. ADL1C ATMPK8 AT1G18460 NDF6 AT1G19600 TUB5 ARAC4 CVP1 DRT112 AT1G22170 AT1G22630 Cpn60beta4 AT1G27120 ARAB-1 IMPL1 AK-HSDH FEI1 CYP97A3 PKp3 GBSS1 ACC1 GAPB AtcFBP CP22 AtBGAL5 ACD1 AtPMEAMT ACT8 AT1G49380 mMDH1 AT1G53290 ATMUM4 ABCD2 AT1G54790 UKL3 ATCSLE1 AT1G56190 AT1G56500 SQE1 ATB2 ACO2 ATSCO1 AT1G62780 NRS/ER TUA1 AT1G65230 cICDH ATGSR2 RGL AT1G66430 DIN9 CER6 AT1G68600 PG2 AT1G70550 PGM2 AT1G70770 AT1G71070 AT1G71710 AT1G72230 AT1G73600 AT1G73655 AT1G73740 ENO1 UMAMIT5 AtGH9B7 AMY2 AT1G76450 AT1G77090 LAX3 AT1G78040 ATTPPB ATGSTU20 ATRHM1 ATTPS1 AtkdsA1 PGK ATNADP-ME4 APG2 RGA AT2G03420 AT2G04700 EXGT-A1 AKN1 ATCLASP ALF1 PDTPI AtFBA1 XK-1 CSI1 AT2G22230 ATIPS2 AT2G23390 AT2G26100 AGO4 TUB7 PY ATFC-II AT2G31040 ATGSL03 BAM6 GALS1 AT2G35050 FEI2 AT2G35840 NHL12 AT2G36145 GAMMA-TIP AGD7 AtAUX1 GAUT7 CYT1 ATISA1 NTRC Encodes a defensin-like (DEFL) family protein. 5PTase12 ATHH2 AtGolS1 PHR2 PnsL3 ATRGP1 GAUT9 ATF1 AT3G02750 ATGSTF11 AtUGP1 EMB3119 ATCSLC06 AT3G09050 AT3G09440 CRM3 OMR1 PAL4 LSF2 ACT11 ATTBP2 PGK1 AT3G14205 ESM1 ATGSL04 ATRHM3 ATHM4 AT3G15570 MFP1 NDF4 EMB2083 AT3G16370 AAE7 EMB1270 AT3G18500 ACT2 AT3G19000 CBB1 AT3G20390 APS1 PKP-ALPHA AT3G23090 HCF101 GAUT8 AFH1 GAMMA-TIP2 GAPA ABCB19 AT3G29185 ATCM1 AT3G48200 AT3G48420 AT3G48460 BAM2 GMD2 AT3G51510 AT3G52500 FTSZ2-2 BGAL2 AtPIP2;1 HCEF1 PMR6 PDE329 SBPASE AT3G56010 AT3G57220 ATVLN3 GAUT15 AT3G59780 AT3G60750 GAUT1 ATPIP1 ARATH;BSAS3;1 AtSLD1 CP12 OEP6 AT4G00560 MGP4 ATXT2 EMB3129 AFB1 AT4G04340 ATPC1 Encodes a putative glycosyl hydrolase family 10 protein (xylanase). APX4 A/N-InvI ATPD ATSPS4F AT4G10300 SKU5 CYP83A1 ATSAHH1 AT4G14360 TUA6 ATOPT3 AtBAM3 ATTPS5 ATSS4 BAM3 AT4G20760 AT4G21060 ATRP1 sks4 PGR5-LIKE PIP1;5 ATCSLG3 ATCSLG1 PGI AtFBA7 AtFBA5 AT4G26650 GDPDL3 VTC2 AT4G26940 ATK2 AT4G27435 AT4G28706 ATHXK1 PFK1 AT4G30020 EMB2797 PGR3 AT4G32330 AtCESA1 AtGLDP1 ATHDA14 AT4G33500 KUP5 ATOST1 ATCAP1 ATVHA-C1 AT4G35335 XCP1 AFT AT4G36180 BGAL3 AT4G36530 ACD2 ATROPGEF1 AtVAB2 AtFBA2 SHL1 APL3 ATCESA2 ATIPS1 AKN2 AT5G01090 ATPDX1 ABCI20 MT2B AT-HSC70-1 AT5G02940 iqd2 SBE2.2 ATLDA SIR AT5G04980 ATCESA3 TBR ATMYB29 ATBX3 CESA5 ATMIPS3 PAS2 ATSPS2F PPD5 ATNADP-ME2 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 ATGSL12 AT5G13140 IQD11 SIG4 AT5G13980 AT5G14500 AT5G14970 GAUT14 LNG1 AtNIK1 VAT1 BCCP AtMYB43 MEX1 BAM9 ADG2 AT5G19760 ATMGD2 ATCPN21 CaS TUB8 ATSS1 AT5G26330 AT5G27560 AT5G28500 GME CAC2 ATGSL1 atylmg3 AT5G36230 CRR7 DEG8 RS5 TUB4 AT5G44520 AT5G46420 Encodes the mitochondrial ATP synthase subunit delta. GAUT4 ADG1 AT5G48590 ATGH9A1 ATTPPA ATPGMP AT5G53340 GLT1 AtPLR1 THI1 VTC5 AT5G55220 ATMAP65-1 AtIAMT1 GDPDL4 ATKCO1 APO2 NPL1 NdhN AT5G58330 AT5G58520 AT5G58540 ATUXS3 CLB4 COB AtMYB28 AtTudor2 ATGT18 AT5G62350 DXR SHA1 JK218 CESA6 BAM1 AT5G66530 IRX15-L
GO:0006461 protein complex assembly	BP	8.304e-63	LPA1 FZL PSB27 POR ATHM1 TOR2 AT1G05140 AT1G05150 emb2394 LPA19 OE23 PSAO ATSYP111 AT1G09200 CRB CLPP6 ATSRS GAPA-2 AT1G14270 AT1G14345 CYCA2;3 NDF1 HCF173 ARF5 TUB5 ATLFNR2 ATSCAR3 AT1G29700 PRK AT1G32470 RPL21C PMI1 GAPB CP22 Lhca5 AT1G49380 TUA2 AT1G50660 HTA10 AT1G52220 PSAH-2 ATBG1 AtTLP18.3 ATDEK1 CCB4 AT1G59860 ABC4 AtNIK3 ATFD2 ATSCO1 AT1G64355 TUA1 Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication). cICDH AT1G67700 PSBY ATHPR1 AT1G68110 AT1G69420 AtCPB LPA3 IQD31 NDH-O emb2184 LQY1 ATCLV1 AtVAB1 PSBR ATNADP-ME4 APG2 ATMAP65-6 STI AT2G04280 OTP51 ATGLK1 PSB29 AtFBA1 IAA8 AT2G25430 AT2G26500 AT2G26730 AGO4 VHA-A1 HIS4 ALB3 ATEXP6 TUB7 ATVLN1 PBCP KIS PSBW FTSH2 ARASP ATRANGAP2 AIR9 ATHB-14 GDCH SKL2 ATFTSZ2-1 ABCB1 AtAUX1 ATSCAR2 MAP65-5 PnsL1 AT2G43030 BIO2 AT2G43560 AT2G43945 AT2G45990 PSAP AtTic20-II CRR6 ATCYP38 SCPL27 AT3G08680 ABCI6 HCF243 PSAH-1 ATKINESIN-13A HCF107 AT3G17340 EMB1270 PSBTN ATTSO1 ATTOPII PLSP1 AFH1 ATGHBDH AtCHUP1 LTA2 GAPA CCB1 AT3G43610 AT3G45850 AT3G45930 AT3G47650 OEC33 FTSZ2-2 HCEF1 PPL1 SBPASE ACSF PrfB3 GUN4 AT3G60320 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. CDS5 MAP65-4 AT3G61870 ATL5 CSP41A TROL ABC1 PSAD-1 PETC ATPC1 ATK5 AT4G08280 ATPD PSAL ATSAHH1 KINESIN-12A APS3 TUA6 AFH3 PPD1 AT4G15830 SPK1 LIL3:1 PSBQ PGR5-LIKE ARC1 ACP4 MAP65-2 PSB28 PSAE-1 ATPAO5 AT4G30020 VEL1 HCF153 PDE334 LUG ATHB-8 SEP1 SLP2 HCF244 MCA1 NDH-M AtVAB2 AtFBA2 VHA-A3 SAMC1 OHP 54CP AT5G06970 AT5G08390 PMDH2 AT5G10020 AT5G10390 AtMYB3R4 ATNADP-ME2 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 ATCYP20-2 CRN EMB3136 CCS52B AT5G13980 ENH1 ATSRA1 EMB40 ATOEP80 TUA3 TUA5 CRR42 H2B CaS HCF136 TUB8 AT5G23910 ATSIG5 AT5G27560 AMOS1 atylmg3 ATPRFB AT5G38520 CRR7 ATUBC8 ATGLK2 TUB4 Encodes the mitochondrial ATP synthase subunit delta. LPA66 AT5G50180 AT5G50420 AT5G51110 LPA2 EXL3 CRR1 CCB2 AT5G52780 AT5G52960 CcdA ATMAP65-1 GDPDL4 ATKCO1 NAP1;3 NPL1 NdhN AT5G58330 GIL1 AT5G59690 HTA6 AT5G59970 TUB3 AT5G65360 BAM1 ATLFNR1 MSP-1 ICU2 PSBA PSBK PSBI ATPH PSBD PSBC YCF3 NDHJ NDHC YCF4 PETA PSBL PSBF PETG RPS18 PSBB PSBN PSBH PETD YCF5 NDHI NDHA
GO:0006739 NADP metabolic process	BP	8.880e-63	POR ATHM1 LIP2 emb2394 LPA19 AT1G07440 PSAO ABC1 AVDE1 CRB ATGSTU18 ATFD1 AT1G12800 PnsL2 AT1G14345 NDF1 AT1G16080 GLYR2 AT1G18060 NDF6 LHCA2*1 ATLFNR2 DRT112 AT1G22630 PRK ATNSI AT1G32470 GAPB FTSH1 GDC1 AT1G51110 PSAG ATSCO1 AT1G62780 NDF2 AT1G65230 cICDH HEMB1 CRR23 AT1G70770 emb2184 LQY1 AT1G76450 AT1G77090 RPI2 ALF1 ATSULA AtFBA1 AT2G21960 YCF37 PRPL35 AT2G27680 PY ATFC-II FTSH2 EDA3 GDCH AT2G36145 AT2G43560 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATGSTF11 EMB3119 PGK1 ESM1 ATHM4 MFP1 NDF4 AT3G23700 HCF101 ATGHBDH PTAC16 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G56010 AT3G59040 GUN4 AT3G59780 AT3G61870 CSP41A AtcpRRF EMB3126 ATCCD1 ANTR2 AT4G02530 PETC APX4 ATPD CYP83A1 LIL3:1 PGR5-LIKE AtFBA7 AtFBA5 AT4G28740 AT4G29120 PGR3 PDE334 AtGLDP1 ATHDA14 AT4G34090 SEP1 ACD2 AtVAB2 AtFBA2 ATPDX1 SBE2.2 ATLDA 2-Cys AT5G08050 AT5G08650 PMDH2 ATNADP-ME2 SIG4 AT5G14910 ENH1 MEX1 PCB2 ADG2 CaS HCF136 PGL5 ARRPS1 ATGSL1 atylmg3 FTSH5 AT5G44520 Encodes the mitochondrial ATP synthase subunit delta. ADG1 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 NdhN CLB4 AtTudor2 DXR PSAN ATLFNR1
GO:0006098 pentose-phosphate shunt	BP	1.194e-62	POR ATHM1 LIP2 emb2394 LPA19 AT1G07440 PSAO ABC1 AVDE1 CRB ATGSTU18 ATFD1 AT1G12800 PnsL2 AT1G14345 NDF1 AT1G16080 GLYR2 AT1G18060 NDF6 LHCA2*1 ATLFNR2 DRT112 AT1G22630 PRK ATNSI AT1G32470 GAPB FTSH1 GDC1 AT1G51110 ATSCO1 AT1G62780 NDF2 AT1G65230 HEMB1 CRR23 AT1G70770 emb2184 LQY1 AT1G76450 AT1G77090 RPI2 ALF1 ATSULA AtFBA1 AT2G21960 YCF37 PRPL35 AT2G27680 PY ATFC-II FTSH2 EDA3 GDCH AT2G36145 AT2G43560 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATGSTF11 EMB3119 PGK1 ESM1 ATHM4 MFP1 NDF4 AT3G23700 HCF101 ATGHBDH PTAC16 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G56010 AT3G59040 GUN4 AT3G59780 AT3G61870 CSP41A AtcpRRF EMB3126 ATCCD1 ANTR2 AT4G02530 PETC APX4 ATPD CYP83A1 LIL3:1 PGR5-LIKE AtFBA7 AtFBA5 AT4G28740 AT4G29120 PGR3 PDE334 AtGLDP1 ATHDA14 AT4G34090 SEP1 ACD2 AtVAB2 AtFBA2 ATPDX1 SBE2.2 ATLDA 2-Cys AT5G08050 AT5G08650 PMDH2 ATNADP-ME2 SIG4 AT5G14910 ENH1 MEX1 PCB2 ADG2 CaS HCF136 PGL5 ARRPS1 ATGSL1 atylmg3 FTSH5 AT5G44520 Encodes the mitochondrial ATP synthase subunit delta. ADG1 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 NdhN CLB4 AtTudor2 DXR PSAN ATLFNR1
GO:0051156 glucose 6-phosphate metabolic process	BP	1.194e-62	POR ATHM1 LIP2 emb2394 LPA19 AT1G07440 PSAO ABC1 AVDE1 CRB ATGSTU18 ATFD1 AT1G12800 PnsL2 AT1G14345 NDF1 AT1G16080 GLYR2 AT1G18060 NDF6 LHCA2*1 ATLFNR2 DRT112 AT1G22630 PRK ATNSI AT1G32470 GAPB FTSH1 GDC1 AT1G51110 ATSCO1 AT1G62780 NDF2 AT1G65230 HEMB1 CRR23 AT1G70770 emb2184 LQY1 AT1G76450 AT1G77090 RPI2 ALF1 ATSULA AtFBA1 AT2G21960 YCF37 PRPL35 AT2G27680 PY ATFC-II FTSH2 EDA3 GDCH AT2G36145 AT2G43560 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATGSTF11 EMB3119 PGK1 ESM1 ATHM4 MFP1 NDF4 AT3G23700 HCF101 ATGHBDH PTAC16 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G56010 AT3G59040 GUN4 AT3G59780 AT3G61870 CSP41A AtcpRRF EMB3126 ATCCD1 ANTR2 AT4G02530 PETC APX4 ATPD CYP83A1 LIL3:1 PGR5-LIKE AtFBA7 AtFBA5 AT4G28740 AT4G29120 PGR3 PDE334 AtGLDP1 ATHDA14 AT4G34090 SEP1 ACD2 AtVAB2 AtFBA2 ATPDX1 SBE2.2 ATLDA 2-Cys AT5G08050 AT5G08650 PMDH2 ATNADP-ME2 SIG4 AT5G14910 ENH1 MEX1 PCB2 ADG2 CaS HCF136 PGL5 ARRPS1 ATGSL1 atylmg3 FTSH5 AT5G44520 Encodes the mitochondrial ATP synthase subunit delta. ADG1 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 NdhN CLB4 AtTudor2 DXR PSAN ATLFNR1
GO:0009070 serine family amino acid biosynthetic pr...	BP	1.394e-62	AT1G01630 AtSAM1 POR ATCTL1 OE23 EMB2784 PSAO AT1G09310 AtHIR1 ACLA-1 ATGLX1 AT1G11860 ELP AT1G12800 CP24 ATSOT17 DRT112 AOAT1 PSAK PSAF ATROPGEF14 ACBP PRK AT1G32470 AT1G33110 AT1G35420 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 PSAH-2 AtTLP18.3 AT1G55260 AT1G55360 PSAG ATSERAT2;1 AT1G56190 ATATP-PRT1 AT1G60000 LHCA3 ACO2 FMO AT1G66430 PSBY AT1G67950 ATHPR1 AT1G68260 AT1G72500 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PETE1 ACR3 AT1G78040 PSBR ATHNIR ALF1 LIP1 PDTPI AtFBA1 AT2G22230 SCPL8 ATMES3 ALDH11A3 AT2G31670 GDCH SKL2 BLH1 PnsL1 AT2G42220 AT2G42690 ATLEUD1 ACS1 CAO EMB3119 ATCYSD1 LHCB4.2 ADK1 ABCI6 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 ATSERAT2;2 FLU JAL35 AT3G19480 BCAT4 CBB1 ADOF2 ATSAHH2 ATGHBDH ATPRX AT3G26450 GAMMA-TIP2 ATSKL1 CAB4 GSA2 ATG4 FTSZ2-2 AtPIP2;1 AT3G54400 SBPASE ACSF PIF5 GUN4 AT3G60750 ARATH;BSAS3;1 CYP20-3 TROL AT4G01310 PSAD-1 APR ATPC1 LHCB5 CYP83A1 AtCLA1 PRXR1 ATSMO1-2 AT4G23670 CER2 PSAE-1 AtGLDP1 KUP5 CCoAOMT1 MCA1 AQI ROC1 ATPRP4 AtFBA2 CYP79B2 AT5G01090 SIR AtPPa6 AST68 PAS2 TUB6 ATCYP20-2 AT5G13140 AT5G13980 AT5G14120 GASA4 PCB2 AT5G19940 ATCPN21 IMS3 CaS ATCYSD2 DES1 ATGSL1 AT5G44020 APE2 TET1 ATGH9A1 AT5G50000 ATMAP65-1 PSAN ASN2 MSP-1
GO:0006725 cellular aromatic compound metabolic pro...	BP	1.423e-62	LHY KCS1 AtFKGP encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT1G01320 ASG4 GAE2 AT1G02110 AT1G02150 AtSAM1 ATCSLD5 FZL PSB27 POR ATHM1 KCS2 IAA3 AXR3 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase LIP2 ATGTF2H2 AT1G05150 emb2394 LPA19 UGT1 BT3 ATCTL1 ATMYB13 RHON1 HPD OE23 SR45a ATPCNA1 AT1G07440 GATA11 AXS2 ADT6 PSAO ALB-1V ABC1 AVDE1 AtMYB60 CRB AT1G10120 ATGSTU18 ACLA-1 EMB3103 ATFD1 CBRLK1 CLPP6 ADT1 ATSRS AT1G12244 PHR1 AT1G12800 AFB3 ICE2 GAPA-2 AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 AT1G14345 AtMYB124 AT1G14460 AT1G14600 CYCA2;3 AT1G15710 FDM1 AT1G15920 ATCCR1 NDF1 ADAP AT1G16080 ATMYB58 AT1G16680 FUG1 GLYR2 AT1G18060 BEE1 AT1G18440 AT1G18485 ATSOT17 AtMYB47 NDF6 LHCA2*1 BES1 AT1G19490 ATCLH1 BEL10 ARF5 ATLFNR2 CVP1 DRT112 AT1G21060 ATNADK2 AGL87 AT1G22630 FB AT1G22910 ATCAF2 AOR MLP423 UGT74B1 ASB1 BBX15 ATSOFL1 Cpn60beta4 AT1G26790 AtHB23 SPL11 AT1G27480 SRD2 AT1G29950 PDH-E1 ARF6 GlcNAc1pUT1 AT1G31710 CYP97A3 AT1G31920 PRK ATNSI ACT1 KAN2 NRT1.5 AT1G32470 PRPL11 AT-GTL1 AT1G33470 AT1G33600 AT1G35560 RPL21C AT1G36280 PMI1 GAPB CYCA1;1 CP22 ATMCM2 ABF2 Lhca5 DYW1 GATB AtPMEAMT AT1G49010 AT1G49380 FTSH1 AT1G50270 SCL-3 POLGAMMA2 GDC1 AT1G51080 AT1G51110 4CL.1 ADOF1 AT1G52220 PSAH-2 ATFPG-1 AT1G52510 SPA4 FTM6 TCP3 ATMUM4 AT1G54500 AtTLP18.3 AtIDD7 NDF5 PSAG ATCSLE1 HAC04 AT1G56050 ATDI19 AT1G56500 ATATP-PRT1 AT1G58170 AtHEMA1 SQE1 CRR28 ARF1 AT1G60590 ABC4 ATB2 ATRECQ4B AT1G62250 ACO2 FMO AT1G62660 ATSCO1 AT1G62780 NRS/ER NRPD1 AT1G63640 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT1G64680 NDF2 RPOD1 4CL3 AT1G65070 AT1G65230 ATPAO4 AT1G65870 cICDH ZFP4 ATGSR2 AtMYB20 EMB2814 AT1G67700 PSBY CSK ATHPR1 AtIDD14 CER6 AT1G68810 ATSOFL2 BIM2 FLN2 AGO7 AtTCP15 HEMB1 CMT3 AT1G70000 SNL4 EMB25 AT1G70200 ATCYCD1;1 AT1G70280 ABCB26 MMZ2 CRR23 AT1G70770 AT1G71480 AT1G72270 AT1G72500 LPA3 ATPIN1 AtEIL3 BBX16 AT1G74070 ATSOT18 ATSOT16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G74840 ATKAS2 emb2184 UMAMIT5 LQY1 AtVAB1 AT1G76110 AT1G76120 CYCB2;4 AT1G76350 AT1G76450 AtHMGR1 AT1G76570 AT1G76880 AT1G77090 AT1G77310 AT1G78010 RAP2.4 ATGSTU20 ATSHB ATRHM1 ATGGH2 AT1G78995 ECT8 APL AT1G80850 APG2 AT2G01210 MEE65 RPI2 RGA ARR14 AtIDD5 AT2G03390 AT2G03420 RNE EMB2761 AT2G05920 AtOPR3 AT2G07170 AT2G07689 AT2G13440 MCM9 AT2G14910 OTP51 MCM4 AT2G17972 ATBZIP2 SCY1 HY3 ATHMA4 AAS ATGLK1 ALF1 LIP1 AtERF53 PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 ATRL2 AT2G21960 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. ATIPS2 AAT AGL22 IAA8 SCPL8 DEAR3 AT2G23360 NAPRT2 ATMES7 ACL YCF37 BLH4 AT2G24060 PRPL35 PDE319 ATRPA2 AT2G24580 ESE2 AT2G25830 OVA4 ATHSFA2 CYP711A1 AT2G26500 ATDUF3 HO2 ATCDPMEK AGO4 LHW AT2G27290 AT2G27680 ADT3 AT2G28200 DRB2 RAP2.7 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 ALB3 ADCS AT2G29180 PY ANTR1 ATVLN1 PBCP AT2G30320 ATFC-II ATC4H PSBW CYP71A13 ATCOQ3 FTSH2 TCP10 ATERF15 BBX25 ATNTH1 AT2G31670 ATCOP1 ATSUVH2 AT2G33550 AtCRL2 ATUBC24 ATHB-14 EDA3 GDCH AT2G35390 AT2G35410 SKL2 AT2G35640 ATCSLA07 ATERF38 AT2G35760 BLH1 ATE2FA AT2G36145 AT2G36200 AT2G36350 DML1 GAMMA-TIP MAT3 AT2G36950 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. UMAMIT13 AS1 AT2G37660 PDX1L4 ATPDX1.1 ATSCAR2 RDO2 PIP2;6 PnsL1 RCA LHCB4.3 AT2G40260 AT2G40400 HEME2 ATKT2 ETG1 CYP98A3 AT2G41130 ARR8 NTRC ATVLN2 AGK1 AtSPL9 ATBZIP34 AT2G42510 AT2G43030 ATLEUD1 AT2G43500 AT2G43560 FAB2 ACS1 BGLU26 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis AT2G46250 SPA1 ARF11 AT2G46810 PSAP PIL1 SPL1 ATDUF5 ATMYB12 PHR2 CRR6 ATCFM2 ATHB-1 ATCYP38 ATBCA1 ATRGP1 RAD23-3 ATF1 AT3G02820 ATGSTF11 PDE326 IAA16 EMB3119 RALFL22 AIF1 AT3G06410 GATA15 AT3G06980 AT3G07270 AT3G08030 LHCB4.2 AT3G09050 ATHY2 PTAC13 AT3G09580 CRM3 ADK1 GYRB1 PAL4 ABCI6 AT3G10840 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 emb2738 AT3G12210 PGK1 AT3G12930 AT3G13000 AT3G13040 ATSERAT2;2 AT3G13120 AT3G13180 AT3G13226 ATKRS-2 AT3G13510 AT3G13740 AT3G14067 FLU ESM1 ATPME3 AT3G14330 ATRHM3 AT3G14890 HEME1 IDM1 MEE35 PRPS20 SPL5 ATHM4 AT3G15520 AT3G15550 ADS3 MFP1 PSAH-1 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ABCG29 AT3G16350 ATEBP HCF107 ECT6 POK1 MAT4 ATCRSH HYH ATACP5 WOX1 NRPD2B EMB1865 AT3G18870 AtTic62 ATCAD4 BCAT4 CBB1 AT3G20230 POLGAMMA1 AT3G20680 PSBTN AtBBX32 GluTRBP 4CL5 4CL2 ADOF2 UGT84A2 AT3G22150 AT3G22520 ATTSO1 ELIP APS1 ATCFM3A bHLH34 ATPHO1 AT3G23700 GAE6 ATTOPII HCF101 ALDH1A AT-HSFC1 PLSP1 ICK3 ATGHBDH AtCHUP1 LTA2 RPL15 ATPRX GAPA ATSNM1 CCB1 ATICE1 ATSKL1 DRB3 ATTSO2 LHCB2 AT3G28460 ATCM1 AT3G42660 CHR38 ATNIT1 JK224 AT3G45900 ATMYB48 PTAC16 DUT1 AT3G47070 PEX11B ATSMC2 PYE AT3G47650 AT3G47830 ATATM AT3G48200 AT3G48420 DCF GSA2 AT3G49000 OBP1 ICK2 BEH1 OEC33 AtHB28 SRS1 GATA6 AT3G51140 GMD2 AT3G51280 ATSSL4 ATG4 AT3G51950 FTSZ2-2 KIPK CYP97C1 ATPAL2 AT3G53680 PYRR HCEF1 ATPTR1 AT3G54390 LHCA1 PPL1 OVA1 ATDFD SBPASE ESK1 AT3G56010 AT3G56290 AT3G56680 AT3G56870 ACSF AT3G57060 BPG2 PrfB3 AGL16 AT3G57800 SPL15 GIS ATWRKY69 AT3G59040 PIF5 GUN4 AT3G59780 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. HAT3 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. MAP65-4 AT3G61080 HD-GL2-1 ARATH;BSAS3;1 ATX3 AT3G61870 CYP20-3 ATMYB11 APG3 ATIPT3 CSP41A OEP6 AtcpRRF OTP86 EMB3126 AT3G63510 ATCCD1 BRCA2(IV) UNE10 YAB3 ANTR2 FDM2 AT4G00560 AT4G00870 AT4G00895 MEE47 TROL GT72B1 AT4G01460 ABC1 HEMG1 AtSAM2 MCM7 AT-RSH1 AT4G02530 EOL1 PSAD-1 EMB3129 AtRBP-DR1 AFB1 PETC EMB2369 APR ATPC1 PDF2 AtMYB74 ATK5 ARGAH2 APX4 AT4G09040 ATPD ATDET1 LHCB5 AT4G11100 SPA2 AT4G11175 ATMPK5 AT4G11570 PSAL AT4G12830 EPFL9 CYP83A1 ATSAHH1 KINESIN-12A AT4G14330 bHLH104 NF-YB3 CIPK4 ELIP2 ATTCX2 AT4G15430 IAGLU AtCLA1 AT4G16141 PHYD AT4G17560 LIL3:1 AT4G17810 MYC4 APRR2 PHYE DEG5 TCP2 CH-42 AT4G18740 AT4G18810 AT4G18820 CMT2 Encodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death. AK-HSDH AAH PTAC14 PSBQ ATM4 ATML1 AT4G21770 ATSMO1-2 PGR5-LIKE CRF2 AT4G24350 AGL24 TAR2 AT4G24750 ATRBP31 AT4G24790 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) AT4G25030 ACP4 CHLM OTP70 AT4G25280 AT4G25290 CGA1 AtFBA7 AtFBA5 AtWRKY20 MAP65-2 ATK2 AT4G27240 CIP7 NARA5 AT4G28080 AT4G28740 PSAE-1 AT4G28780 emb2726 IAA27 AT4G29100 AT4G29120 AT4G30180 AHA2 AR2 GAE1 AT4G30470 SARK GGP1 FAD6 ACDO1 PGR3 PDE334 LUG ATSDX1 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHB-8 ATH1 AtGLDP1 ATHDA14 AtHMAC6 AT4G33740 AT4G33760 CCoAOMT1 AT4G34090 SEP1 BLH6 SSR16 ERG9 AT4G34730 ASE2 MRL1 AtMYB32 HCF244 AT4G35270 AT4G36180 CYP84A1 GATA7 BGAL3 AT4G36390 BEE2 ATRL3 AtPLT6 BLH2 ACD2 CYP81F3 ANT SHM1 ATCAD6 ATCAD7 pde191 AQI AtVAB2 ATMYB4 AtFBA2 AT4G39040 VHA-A3 ATCAD9 SAMC1 ATSK2 AT4G39630 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AKN2 CYP79B2 DHS1 AT5G01020 LAC8 SQD2 ATPDX1 AIRP2 LHCB4.1 AT5G02160 ATMTRNASEII AT5G02370 AT5G02460 AT5G02710 ATRAB AtNCS1 SBE2.2 54CP GYRB2 FD-GOGAT ATPAL3 ATLDA BTR1 SIR ATOFP13 NOL ATCESA3 AT5G05180 AT5G05790 UGT76C2 2-Cys HAT14 AT5G07020 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ATMYB29 AT5G08050 TCP17 BIM1 FTRA2 AT5G08430 PDE340 AT5G08650 AtSRT2 AtPPa6 PMDH2 AST68 AIL6 AT5G10605 AT5G10690 AT5G10960 AT5G10970 HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 TINY2 ATNADP-ME2 AT5G12970 ATGSL12 EMB3136 ABAR SVR3 SIG4 CCS52B ATCHS EMB3137 AT5G14460 AT5G14500 AT5G14700 BETA AO AT5G14910 AT5G14970 AT5G15390 AtbZIP3 AtMYB43 EMB2247 ENH1 PSY MEX1 AT5G17660 anac088 ATSRA1 AT5G18550 ATOBGC PCB2 NSH3 ADG2 AT5G19290 ATMGD2 CRR42 ATCKX5 ATHMA8 anac089 AT5G22340 IMS3 CaS HCF136 AT5G23280 HMGB6 AT5G23480 SLAH3 ATSIG5 PGL5 LSU2 CRY3 AT5G25590 PYR6 AT5G28300 AT5G28500 GME ARRPS1 AT5G34930 AT5G35170 CAC2 ATGSL1 AHK2 AT5G35970 atylmg3 AT5G36160 ATPRFB CAT3 AT5G37010 ARF8 ARLA1A AT5G38520 CRR7 UDG4 ORTH1 DRB5 ATUBC8 AT5G41760 AT5G42070 FTSH5 AOS AT5G43150 SPL2 TZP AT5G44020 ATGLK2 AT5G44520 MCM6 ATFKBP13 AT5G45720 CHL AtNUDT11 AtLARP6a AT5G46390 AT5G46420 AT5G46580 bHLH071 PYL1 ATNIG1 AT5G46910 Encodes the mitochondrial ATP synthase subunit delta. AT5G47190 AT5G47390 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT5G47620 NF-YB2 FPS1 FRA1 AMK2 AT5G48220 ADG1 AT5G48360 HINT3 ATCAP-C LPA66 HCT OVA2 DDM2 ATMYB111 ATPPOX AT5G50000 AT5G50110 OLD5 AT5G50370 AT5G51110 AT5G51140 LPA2 At-NEET ATPGMP AT5G52010 CRR1 SCL8 AT5G52660 AT5G52780 ATWRKY27 AT5G52960 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 ATOMT1 PTAC15 THI1 AT5G55220 CRR21 AT5G56840 AT5G56850 GATA21 NAP1;3 CIA2 AHA3 BIO1 ADCL APO2 NPL1 NdhN AT5G58330 DDB2 ATUXS3 AtVIP2 ARF4 ATPDX2 CLB4 ATMYB34 PNM1 PIF7 AtMYB28 AtTudor2 ARF1-BP CDF1 AHA11 DXR AT5G62840 BT1 ATNDPK2 AT5G63700 SHA1 ALX8 PSAN EMB3144 AT5G65220 ATHB-5 KAC2 STR16 ATLFNR1 AT5G66470 AT5G66520 MSP-1 ENY AT5G66770 ICU2 EPS1 TOE3 AT5G67200 PSBA MATK RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBF PSBE ORF31 PETG PSAJ RPS18 RPL20 CLPP1 PSBB PSBT PSBN PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 NDHB.1 NDHF YCF5 NDHD NDHE NDHG NDHI NDHA RPS15 NDHB.2 RPL2.2 ATP6 NAD5
GO:0010207 photosystem II assembly	BP	1.924e-62	LPA1 FZL PSB27 POR ATHM1 AT1G05140 emb2394 LPA19 OE23 PSAO CRB CLPP6 ATSRS GAPA-2 AT1G14270 AT1G14345 NDF1 HCF173 ATLFNR2 AT1G29700 PRK AT1G32470 RPL21C PMI1 GAPB CP22 Lhca5 AT1G52220 PSAH-2 AtTLP18.3 CCB4 ABC4 ATFD2 ATSCO1 AT1G64355 AT1G67700 PSBY ATHPR1 LPA3 emb2184 LQY1 PSBR APG2 ATGLK1 PSB29 AtFBA1 AT2G26500 ALB3 PBCP PSBW FTSH2 ARASP GDCH SKL2 PnsL1 AT2G43030 AT2G43560 AT2G43945 AT2G45990 PSAP AtTic20-II ATCYP38 ABCI6 HCF243 PSAH-1 HCF107 PSBTN PLSP1 AtCHUP1 GAPA CCB1 AT3G47650 OEC33 HCEF1 PPL1 SBPASE ACSF GUN4 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. CDS5 AT3G61870 CSP41A TROL PSAD-1 PETC ATPC1 AT4G08280 ATPD PSAL LIL3:1 PSBQ PGR5-LIKE ACP4 PSB28 PSAE-1 PDE334 SEP1 HCF244 AtFBA2 SAMC1 OHP PMDH2 EMB3136 ENH1 ATOEP80 CRR42 CaS HCF136 ATSIG5 AT5G27560 AMOS1 ATPRFB AT5G38520 CRR7 ATGLK2 AT5G51110 LPA2 CRR1 CCB2 AT5G52780 AT5G52960 NPL1 NdhN AT5G58330 ATLFNR1 MSP-1 PSBA PSBK PSBI ATPH PSBD PSBC NDHJ NDHC YCF4 PETA PSBL PSBF PETG RPS18 PSBB PSBN PSBH PETD NDHI NDHA
GO:0055086 nucleobase-containing small molecule met...	BP	5.302e-62	AtFKGP GAE2 AtSAM1 POR ATHM1 LIP2 emb2394 LPA19 ATPCNA1 AT1G07440 AXS2 PSAO ABC1 AVDE1 CRB ATGSTU18 ATFD1 AT1G12800 AT1G13730 PnsL2 AT1G14345 NDF1 AT1G16080 GLYR2 AT1G18060 NDF6 LHCA2*1 ATLFNR2 DRT112 ATNADK2 AT1G22630 AOR GlcNAc1pUT1 PRK ATNSI AT1G32470 AT1G36280 GAPB ATMCM2 FTSH1 GDC1 AT1G51110 ATMUM4 PSAG ATSCO1 AT1G62780 NRS/ER NDF2 AT1G65230 cICDH CER6 BIM2 FLN2 HEMB1 CRR23 AT1G70770 ATPIN1 ATKAS2 emb2184 LQY1 AtVAB1 AT1G76450 AtHMGR1 AT1G77090 ATRHM1 RPI2 AT2G07689 MCM4 ATHMA4 ALF1 LIP1 ATSULA AtFBA1 AT2G21960 SCPL8 NAPRT2 YCF37 PRPL35 AT2G27680 PY ATFC-II FTSH2 EDA3 GDCH AT2G35390 SKL2 ATE2FA AT2G36145 MAT3 AGK1 AT2G43560 FAB2 ACS1 AT2G44920 PSAP ATCYP38 ATBCA1 ATRGP1 ATF1 ATGSTF11 EMB3119 ADK1 PGK1 FLU ESM1 ATRHM3 ATHM4 MFP1 NDF4 MAT4 ATCRSH AT3G23700 GAE6 HCF101 ATGHBDH LTA2 ATSKL1 ATTSO2 PTAC16 DUT1 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 GMD2 ATG4 FTSZ2-2 PYRR HCEF1 PPL1 SBPASE AT3G56010 AT3G59040 PIF5 GUN4 AT3G59780 AT3G61870 CYP20-3 CSP41A AtcpRRF EMB3126 ATCCD1 ANTR2 AT4G00560 AT4G00895 TROL AtSAM2 AT-RSH1 AT4G02530 PETC ATPC1 APX4 ATPD CYP83A1 AtCLA1 LIL3:1 AK-HSDH PGR5-LIKE AT4G24350 AT4G25280 AtFBA7 AtFBA5 AT4G28740 AT4G29120 AHA2 GAE1 FAD6 PGR3 PDE334 ATH1 AtGLDP1 ATHDA14 AtHMAC6 AT4G34090 SEP1 ASE2 ACD2 AtVAB2 AtFBA2 VHA-A3 ATPDX1 AtNCS1 SBE2.2 ATLDA AT5G05180 2-Cys AT5G08050 PDE340 AT5G08650 PMDH2 ATNADP-ME2 SIG4 AO AT5G14910 ENH1 MEX1 PCB2 NSH3 ADG2 ATHMA8 CaS HCF136 PGL5 PYR6 GME ARRPS1 AT5G35170 ATGSL1 atylmg3 UDG4 FTSH5 AOS AT5G44520 AtNUDT11 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AMK2 ADG1 HINT3 OLD5 AT5G50370 AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 AHA3 NdhN ATUXS3 CLB4 PNM1 AtTudor2 AHA11 DXR ATNDPK2 PSAN ATLFNR1 ATPA ATPF ATPH ATPI ATPE ATPB NDHB.1 NDHF NDHD NDHE NDHB.2 ATP6 NAD5
GO:0043170 macromolecule metabolic process	BP	1.541e-61	LHY AtFKGP encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT1G01300 AT1G01320 ASG4 AT1G01540 ATGPAT4 AT1G02110 AT1G02150 ATCSLD5 PSAD-2 FZL AtBE2 AT1G03590 PSB27 POR ATHM1 AT1G04040 IAA3 AXR3 AT1G04430 PDLP2 LIP2 AT1G04680 AT1G04800 TOR2 ATGTF2H2 AT1G05140 AT1G05150 AT1G05170 emb2394 BT3 ATCTL1 AT1G05870 ATMYB13 RHON1 FTSH8 ATGSL07 OE23 ATF2KP AT1G07280 EMB2784 SR45a ATPCNA1 AtRLP1 ATRAB-A2B AT1G07440 ftsh10 ATMPK13 GATA11 AT1G08280 PSAO ABC1 AVDE1 AT1G08800 AtMYB60 CRB AT1G09440 AT1G09750 iPGAM1 AtHIR1 LRR AT1G10120 ATGSTU18 ACLA-1 AT1G10850 EMB3103 AT1G11050 SCM AT1G11340 CBRLK1 AT1G11410 ATPMEPCRA ATSS3 CLPP6 ATSRS ELP ATNRT1 AT1G12244 PHR1 AT1G12460 AT1G12500 ATRBL6 AT1G12800 AFB3 ICE2 GAPA-2 AT1G14200 AT1G14270 PKS2 AtMYB124 AT1G14460 AT1G14600 scpl50 RHA2A AT1G15165 AT1G15530 CYCA2;3 CP24 FDM1 AT1G15920 ADAP ATMYB58 AT1G16680 HCF173 FUG1 ATEGY3 ATMPK8 AT1G18170 BEE1 AT1G18440 AT1G18485 AT1G18660 AtMYB47 NDF6 LHCA2*1 BES1 AT1G19490 ATDHAR1 ATCLH1 BEL10 ARF5 TUB5 ATLFNR2 ARAC4 CVP1 DRT112 ASG5 AT1G20810 XCP2 AT1G21060 AT1G21590 LYM1 AGL87 AT1G22630 FB AT1G22910 AT1G23030 ATCAF2 MLP423 ARL1 AT1G24330 BBX15 AtPERK10 AT1G26190 Cpn60beta4 AT1G26790 AtHB23 AT1G27120 SPL11 AT1G27480 ATPUB45 AT1G28390 SRD2 AT1G29070 AT1G29720 RKF1 AT1G29950 ARF6 AT1G30600 AT1G30690 IMPL1 AK-HSDH FEI1 CYP97A3 AT1G31920 PRK AT1G32160 KAN2 AT1G32470 GBSS1 PRPL11 AT-GTL1 AT1G33470 AT1G33600 ATSERK2 AT1G35340 AT1G35560 RPL21C ACC1 PMI1 GAPB AtcFBP CYCA1;1 CP22 ATMCM2 ABF2 Lhca5 5PTASE11 DYW1 EMB3105 RKL1 GATB AtPMEAMT AT1G49010 ACT8 AT1G49380 LACS2 AT1G49580 ATPREP2 PUB26 AT1G50120 FTSH1 AT1G50270 AT1G50380 SCL-3 POLGAMMA2 AT1G51080 ADOF1 AT1G51805 AT1G52220 PSAH-2 ATFPG-1 AT1G52510 AT1G52540 SPA4 FTM6 TCP3 mMDH1 AT1G53290 AT1G53430 ATMUM4 ATMPK18 ATMSRB1 AT1G53900 AT1G54050 AT1G54290 ABCD2 AT1G54500 AtTLP18.3 AT1G54790 AT1G54820 ANP2 AtIDD7 NDF5 CPN60B PSAG AT1G55690 UKL3 ATCSLE1 HAC04 AT1G56190 AT1G56210 ATDI19 AT1G56500 AT1G58170 SQE1 CRR28 ARF1 AT1G59860 AT1G59970 AT1G60590 ABC4 AtNIK3 ATRECQ4B AT1G61190 AT1G61300 AT1G61610 AT1G62170 ATSCO1 AT1G62780 NRS/ER NRPD1 AT1G63640 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT1G64500 AT1G64510 BDG1 AT1G64680 TUA1 RPOD1 AT1G65070 AT1G65190 AT1G65220 AT1G65230 AtRLP10 cICDH AT1G66080 ZFP4 TMK1 AtMYB20 EMB2814 AT1G67700 PSBY CSK ATHPR1 AtIDD14 AT1G68400 CER6 PSRP3/1 AT1G68600 AT1G68660 AT1G68810 AT1G68940 FLN2 AGO7 AtTCP15 HEMB1 CMT3 AT1G70000 SNL4 EMB25 AT1G70200 ATCYCD1;1 AXY4 AT1G70280 PG2 AT1G70550 MMZ2 PGM2 AT1G71810 AT1G72230 AT1G72270 PSY1R AT1G73170 AT1G73390 AT1G73450 AT1G73460 ATPIN1 AT1G73600 AT1G73655 Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. ATMPK15 AtEIL3 BBX16 SPPA AT1G74070 ATHSP101 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. QKY AT1G74840 NDH-O ATKAS2 RPS9 emb2184 UMAMIT5 AtGH9B7 LQY1 ATCLV1 PETE1 AT1G76110 AT1G76120 AMY2 sks5 CYCB2;4 AT1G76350 AT1G76450 AtHMGR1 AT1G76880 AT1G77090 AT1G77310 LAX3 AT1G78010 RAP2.4 ATGSTU20 ATSHB ATRHM1 emb1473 AT1G78995 APL AtkdsA1 EMB1047 AT1G79600 AT1G79630 AT1G79640 RFO1 AT1G79720 ATNADP-ME4 CS17 AT1G80030 AT1G80640 AT1G80850 AT1G80870 APG2 AT2G01210 MEE65 RGA ARR14 AT2G01820 AHK4 BRL2 AtIDD5 STI AT2G02780 ATEXP15 AT2G03140 AT2G03390 AT2G03420 AT2G03750 RNE AT2G04700 EMB2761 AT2G05920 EXGT-A1 AT2G07170 AT2G13440 MCM9 ARFB1A OTP51 MCM4 AT2G16750 AT2G17972 ATBZIP2 AT2G18630 SCY1 HY3 SLP3 ATCLASP ALE2 AT2G20550 ATGLK1 ALF1 AT2G20725 LIP1 AtERF53 PSB29 BBX18 AtFBA1 AT2G21380 ATRL2 CSI1 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT2G22230 AT2G22360 AGL22 IAA8 SCPL11 SCPL8 scpl10 AT2G23070 DEAR3 AT2G23360 AT2G23390 AT2G23690 BLH4 AT2G23950 AT2G24060 PRPL35 PDE319 AT2G24170 AT2G24230 AT2G24280 ATRPA2 AtDBP1 AT2G25800 ESE2 OVA4 AT2G26100 ATHSFA2 ER AT2G26500 KCS11 AT2G26730 AGO4 AT2G27060 LHW AT2G27290 AT2G27420 AT2G27680 CH-CPN60A ATFUC1 AT2G28200 DRB2 RAP2.7 AT2G28590 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 ALB3 ATRBL1 AT2G29180 TUB7 PY ATVLN1 PBCP AT2G30320 ATFC-II PSBW ATCOQ3 FTSH2 ASKdZeta AT2G31040 TCP10 ATERF15 BBX25 ATNTH1 AT2G31670 ATMYO5 ATGSL03 BAM6 ARASP MAPKKK17 ATCOP1 ATSUVH2 PRPL28 AT2G33550 GALS1 ATUBC24 EMB3113 AtCCP1 ABR ATHB-14 EDA3 AT2G35050 AT2G35260 GDCH AT2G35410 SKL2 FEI2 AT2G35640 ATERF38 scpl26 AT2G35880 BLH1 NHL12 ATE2FA AT2G36145 AT2G36200 AT2G36350 DML1 AT2G36570 AT2G36630 AtXTH32 ATSIG6 AT2G37050 UMAMIT13 AS1 AT2G37660 AtAUX1 PSRP4 ATSCAR2 RDO2 GAUT7 PnsL1 Encodes a Cysteine-rich peptide (CRP) family protein CYT1 AT2G39850 ATISA1 LHCB4.3 AT2G40260 ATKT2 ETG1 AT2G41050 AT2G41130 ATCBK3 ARR8 NTRC AT2G41820 AT2G41890 AtSPL9 ATBZIP34 AT2G42510 AT2G42750 ATMPK20 AT2G43030 AT2G43500 Encodes a defensin-like (DEFL) family protein. AT2G43560 AT2G43590 ACS1 AT2G43760 AT2G44230 CHL-CPN10 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT2G45340 AT2G45870 ASK20 AT2G46250 SPA1 ARF11 AT2G46810 PSAP PIL1 PTI1-4 SPL1 ATDUF5 CER8 AT2G47440 CAO ATMYB12 PHR2 DEG2 AtSS2 ATCFM2 PnsL3 ATHB-1 ATCYP38 AT3G01490 AT3G01810 scpl25 ATRGP1 RAD23-3 ATF1 AT3G02750 AT3G02820 PNT1 ATGSTF11 AtUGP1 PDE326 AT3G03770 emb2458 SDG31 IAA16 ATWNK1 ATN AT3G05350 AIF1 ATSK12 AT3G05900 AT3G06180 AT3G06410 GATA15 AT3G06980 ATCSLC06 ATPUB9 SCPL27 AT3G08600 AT3G08660 AT3G08680 ATPK1 LHCB4.2 AT3G09050 PTAC13 Fes1A AT3G09440 AT3G09540 AT3G09580 CRM3 AT3G09730 OMR1 AT3G10060 GYRB1 PAL4 SPD1 ABCI6 AT3G10840 LSF2 AT3G11470 AT3G12050 emb2738 ACT11 AT3G12210 ATHSP70 AGC1.5 PGK1 AT3G13000 AT3G13040 AT3G13120 AT3G13180 AT3G13226 Cpn60beta2 ATKRS-2 AT3G13510 AT3G13740 AT3G14067 FLU AT3G14200 ESM1 AT3G14240 AT3G14330 SRF7 ATGSL04 ATMPK19 ATRHM3 AT3G14890 IDM1 MEE35 PRPS20 SPL5 SPA3 ATHM4 AT3G15520 AT3G15550 AT3G15570 MFP1 PSAH-1 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. EMB2083 AT3G16350 AT3G16370 ATKINESIN-13A ATEBP AT3G16850 HCF107 ECT6 POK1 CIPK1 HYH ATACP5 RLK902 WOX1 NRPD2B EMB1270 EMB1865 AT3G18500 ATPUB29 ATWNK6 ACT2 AT3G18870 AtTic62 AT3G19000 ATPREP1 PUB25 IKU2 CBB1 AT3G19850 AT3G20015 AT3G20230 POLGAMMA1 AT3G20680 PSBTN AtBBX32 ADOF2 CYCP2;1 AT3G22150 ATWNK2 AT3G22520 ATTSO1 NET1A PKP-ALPHA ATSR2 ATCFM3A AT3G23090 bHLH34 AT3G23310 AT3G23700 ATTOPII AT3G23930 AT3G24190 HCF101 AT-HSFC1 PLSP1 AT3G24715 ICK3 GAUT8 ATFKBP62 AFH1 AtNIK2 AtCHUP1 AT3G25700 AOC1 RPL15 ATPRX GAMMA-TIP2 GAPA ATSNM1 AT3G26700 CCB1 ATICE1 ATSKL1 DRB3 ATTSO2 GHS1 LHCB2 RPL12 RPL12-C AT3G28040 AT3G28460 ABCB19 AT3G29185 AT3G42660 CHR38 ATJ AT3G44620 RPL9 AtXTH31 scpl48 JK224 ATMYB48 AT3G46370 PTAC16 DUT1 AT3G47070 ATSMC2 AT3G47580 PYE AT3G47650 PUB39 AT3G47830 ATATM AT3G48200 CEP3 AT3G48420 DCF GSA2 AT3G49000 AT3G49340 BAM2 AT3G49810 OBP1 CRK ICK2 AT3G50685 BEH1 OEC33 AtHB28 SRS1 GATA6 AT3G51140 AT3G51280 ATSSL4 AT3G51510 ATWNK5 IMK2 ATG4 AT3G51950 AT3G52500 FTSZ2-2 KIPK AT3G52960 CYP97C1 AT3G53380 AT3G53680 HCEF1 AT3G54210 TBL36 AT3G54290 AT3G54390 AT3G54400 LHCA1 PMR6 GSTL2 PDE329 PPL1 OVA1 SBPASE ESK1 AT3G56010 IMK3 AT3G56290 AT3G56370 AT3G56760 AT3G56870 PSRP5 ACSF AT3G57060 AT3G57070 BPG2 PrfB3 AT3G57220 AGL16 AT3G57400 ATVLN3 AT3G57800 AT3G57830 SPL15 GIS ATWRKY69 AT3G59040 PIF5 GUN4 ACR4 AT3G59780 AT3G60320 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. HAT3 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT3G60750 MAP65-4 GAUT1 HD-GL2-1 ATX3 AT3G61820 AT3G61870 CYP20-3 CP12 AT3G62570 ATMYB11 APG3 ATIPT3 CYCP1;1 CSP41A OEP6 AtcpRRF ATMRK1 AT3G63340 OTP86 EMB3126 AT3G63510 ATCCD1 BB BRCA2(IV) UNE10 AT4G00165 YAB3 EDA8 RLK4 FDM2 AtGPAT8 AT4G00560 ASKTHETA AHDP QUA3 AT4G00870 MEE47 CRK41 TROL MGP4 AT4G01310 AT4G01460 MCM7 AT4G02410 ATXT2 AT4G02530 AT4G02630 EOL1 PSAD-1 EMB3129 AtRBP-DR1 AFB1 XTH9 AT4G03260 PETC AT4G04340 EMB2369 ATPC1 CPK27 ATKEA3 PDF2 AtMYB74 PSBQ ATK5 Encodes a putative glycosyl hydrolase family 10 protein (xylanase). ORL1 APX4 AT4G09040 CRRJ ATPD ATDET1 AT4G10300 LHCB5 AT4G10390 AT4G11100 SPA2 AT4G11175 AT4G11320 ATMPK5 Hop3 SKU5 PSAL AT4G12830 scpl20 EPFL9 SDG22 AT4G13540 CYP83A1 ATSAHH1 KINESIN-12A PDE226 AT4G14330 AT4G14360 bHLH104 NF-YB3 CIPK4 ATTCX2 TUA6 AT-BETA-AMY AT4G15430 AT4G15545 AtCLA1 AT4G16141 PHYD ATOPT3 CLPR4 AtBAM3 ATRAB1C AT4G17560 LIL3:1 AT4G17740 ATTPS5 AT4G17810 MYC4 APRR2 PHYE ATSS4 DEG5 TCP2 CH-42 ATWL4 AT4G18740 AT4G18810 AT4G18820 CMT2 Encodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death. AAH PTAC14 BAM3 ATRAB8D AT4G20760 GHR1 AT4G21060 ATRP1 PSBQ B120 ATM4 AT4G21650 ATML1 AT4G21770 sks4 AT4G22290 CYP706A2 AT4G22730 ATSMO1-2 PGR5-LIKE CRK21 CRK22 AT4G23740 CRF2 CRR31 ATCSLG3 ATCSLG1 cpHsc70-1 AGL24 PGI AT4G24750 AT4G24760 ATRBP31 AT4G24790 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) ACP4 CHLM MSRA4 OTP70 AT4G25280 AT4G25290 CGA1 AtFBA7 AtFBA5 AT4G26540 AT4G26555 AGC1-2 AtWRKY20 GDPDL3 MAP65-2 AT4G26940 AT4G27130 ATK2 AT4G27240 AT4G27300 CIP7 AT4G27435 AT4G27560 NARA5 AT4G28080 AT4G28180 AT4G28360 AT4G28480 PSAE-1 AT4G28780 emb2726 IAA27 AT4G29100 AT4G29920 AT4G30020 AT4G30180 AHA2 VEL1 SARK BRS1 scpl29 ASHR3 AtLAP2 FAD6 ATCIPK6 PGR3 AT4G32000 PDE334 AT4G32330 AtCESA1 LUG encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHB-8 ATH1 AtGLDP1 AT4G33080 FAB1A ATHDA14 AT4G33500 AT4G33740 AT4G33760 ATOST1 SEP1 AT4G34220 ATCAP1 BLH6 SSR16 SQS2 AT4G34730 MRL1 SLP2 AtMYB32 CAT2 HCF244 AT4G35270 XCP1 AFT AT4G36180 GATA7 AT4G36390 AT4G36530 BEE2 ATRL3 BLH2 ACD2 ANT XTH7 pde191 AQI ATROPGEF1 AtVAB2 AT4G38520 ATMYB4 AT4G38690 ROC1 AtFBA2 AT4G39040 AT4G39150 APL3 ATCESA2 SAMC1 AT4G39630 FKBP16-2 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT4G39960 AT5G01020 AT5G01090 ATPDX1 LHCB4.1 AT5G01590 AT5G01890 STN8 AT5G02160 ATMTRNASEII AT5G02370 PLL2 AT5G02460 AT-HSC70-1 AT5G02710 AT5G02940 AT5G03140 ATRAB SBE2.2 AT5G03870 AT5G03880 54CP GYRB2 ATPAL3 ATLDA BTR1 ATOFP13 NOL RUL1 ATCESA3 ATEGY2 AT5G05790 ATROPGEF5 TBR HAT14 AT5G07020 AT5G07030 ERL2 ATMSRA2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ATMYB29 AT5G08050 TCP17 BIM1 scpl35 AT5G08390 FTRA2 AT5G08430 AT5G08650 AtSRT2 PMDH2 ATBX3 CESA5 AT5G10020 PAS2 AIL6 AT5G10605 AT5G10690 AT5G10770 CIPK5 AT5G10960 AT5G10970 HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 TINY2 ATNADP-ME2 AT5G12110 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 DiT1 ATGSL12 ATCYP20-2 AT5G13140 CRN AT5G13410 IQD11 EMB3136 SVR3 SIG4 CCS52B AT5G14210 EMB3137 AT5G14460 AT5G14500 ATSK13 ATDEF2 AT5G14970 AT5G15070 AtENODL17 AT5G15390 APG6 GAUT14 LNG1 AtbZIP3 AtNIK1 VAT1 BCCP LRR1 AtMYB43 DHAR3 EMB2247 AT5G16720 AT5G16810 ENH1 MEX1 AT5G17660 EMB1241 PSRP6 AT5G18140 anac088 ATSRA1 AT5G18500 AT5G18550 ATOBGC PCB2 BAM9 EMB3013 ADG2 AT5G19290 AtRbcX2 AT5G19940 AT5G20050 ATMGD2 ATBRXL4 CRR42 AT5G21222 CIPK26 UBP8 anac089 AT5G22850 CaS HCF136 AT5G23170 SCPL34 AT5G23280 HMGB6 AT5G23480 TUB8 AT5G24010 ATSIG5 ATSS1 AT5G24320 LSU2 CRY3 AT5G25590 AT5G26330 AT5G27560 ATNEK3 AT5G28300 AT5G28500 ARRPS1 AT5G35170 AMOS1 CAC2 AHK2 atylmg3 ATPRFB AT5G36230 CAT3 AT5G37010 ARF8 ARLA1A AT5G37790 AT5G38510 AT5G38520 CRR7 ORTH1 DEG8 AT5G40140 CRK42 RPL27 DRB5 ATUBC8 AT5G41760 AT5G42070 FTSH5 AT5G42620 SPL2 TZP ATGLK2 TUB4 AT5G44520 AT5G44530 MCM6 AT5G45290 BAM8 AT5G45650 ATFKBP13 AT5G45720 CIPK20 APE2 AtLARP6a AT5G46390 AT5G46420 BSK2 bHLH071 ATNIG1 AT5G46910 Encodes the mitochondrial ATP synthase subunit delta. LON2 AT5G47190 AT5G47390 AT5G47620 NF-YB2 FRA1 AMK2 ADG1 AT5G48360 ATFKBP65 AT5G48590 ATCAP-C AT5G48790 LPA66 OVA2 DDM2 ATMYB111 ACLB-2 XIP1 ATGH9A1 cpHsc70-2 AT5G50000 AT5G50110 AT5G50180 CAA33 AT5G51110 AT5G51140 LPA2 AT5G51560 At-NEET ATPGMP AT5G52010 CRR1 SCL8 ATHS83 AT5G52660 AT5G52780 ATWRKY27 AT5G52960 AT5G52970 AT5G53140 FTSH11 AT5G53340 ORG1 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 AtPSKR2 PTAC15 CRLK1 RPL24 THI1 AT5G55220 ATMAP65-1 AtIAMT1 GDPDL4 ATKCO1 CRR21 AT5G55950 AtHsp90-3 AtHsp90.2 AT5G56040 ILL1 AT5G56790 AT5G56840 AT5G56850 GATA21 AT5G56890 NAP1;3 CIA2 PSD2 BIO1 AT5G57610 APO2 NPL1 AT5G58150 NdhN AT5G58330 AT5G58520 AT5G58540 FOLK DDB2 ftsh9 AT5G58950 AT5G59130 AT5G59610 AtVIP2 AT5G60270 LecRK-I.9 ARF4 CLB4 ATMYB34 COB PNM1 PIF7 AT5G61350 AtMYB28 AT5G61570 AtTudor2 ARF1-BP ATGT18 CDF1 AT5G62710 DXR AT5G62840 BT1 AT5G63410 SNRK2-5 AT5G63700 AT5G63710 SHA1 AT5G63940 ALX8 PSAN JK218 EMB3144 CESA6 ATPUB38 AT5G65220 ATHB-5 KAC2 BAM1 XTH6 CGR3 ATLFNR1 AT5G66470 AT5G66520 MSP-1 ENY AT5G66770 ICU2 TOE3 AT5G67200 IRX15-L ATEB1C RLK ARA12 PSBA MATK RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 RPS14 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBF PSBE ORF31 PETG PSAJ RPS18 RPL20 CLPP1 PSBB PSBT PSBN PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 RPL2.1 RPL23 RPS7 YCF5 NDHD NDHE NDHG NDHI NDHA RPS15 RPS7.2 RPL23.2 RPL2.2 RPL16
GO:0065003 macromolecular complex assembly	BP	1.802e-61	LPA1 FZL PSB27 POR ATHM1 TOR2 AT1G05140 AT1G05150 emb2394 LPA19 OE23 PSAO ATSYP111 AT1G09200 CRB CLPP6 ATSRS GAPA-2 AT1G14270 AT1G14345 CYCA2;3 NDF1 HCF173 ARF5 TUB5 ATLFNR2 ATSCAR3 AT1G29700 PRK AT1G32470 RPL21C PMI1 GAPB CP22 Lhca5 AT1G49380 TUA2 AT1G50660 HTA10 AT1G52220 PSAH-2 ATBG1 AtTLP18.3 ATDEK1 CCB4 AT1G59860 ABC4 AtNIK3 ATFD2 ATSCO1 AT1G64355 TUA1 Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication). cICDH AT1G67700 PSBY ATHPR1 AT1G68110 AT1G69420 AtCPB LPA3 IQD31 NDH-O emb2184 LQY1 ATCLV1 AtVAB1 PSBR ATNADP-ME4 APG2 ATMAP65-6 STI AT2G04280 OTP51 ATGLK1 PSB29 AtFBA1 IAA8 AT2G25270 AT2G25430 AT2G26500 AT2G26730 AGO4 VHA-A1 HIS4 ALB3 ATEXP6 TUB7 ATVLN1 PBCP KIS PSBW FTSH2 ARASP ATRANGAP2 AIR9 ATHB-14 GDCH SKL2 ATFTSZ2-1 ABCB1 AtAUX1 ATSCAR2 MAP65-5 PnsL1 AT2G42510 AT2G43030 BIO2 AT2G43560 AT2G43945 AT2G45990 PSAP AtTic20-II CRR6 ATCYP38 SCPL27 AT3G08680 ABCI6 HCF243 AT3G15550 PSAH-1 ATKINESIN-13A HCF107 AT3G17340 EMB1270 PSBTN ATTSO1 ATTOPII PLSP1 AFH1 ATGHBDH AtCHUP1 LTA2 GAPA CCB1 AT3G43610 AT3G45850 AT3G45930 AT3G47650 OEC33 FTSZ2-2 HCEF1 PPL1 SBPASE ACSF PrfB3 GUN4 AT3G60320 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. CDS5 MAP65-4 AT3G61870 ATL5 CSP41A TROL ABC1 PSAD-1 PETC ATPC1 ATK5 AT4G08280 ATPD PSAL ATSAHH1 KINESIN-12A APS3 TUA6 AFH3 PPD1 AT4G15830 SPK1 LIL3:1 PSBQ PGR5-LIKE ARC1 ACP4 MAP65-2 PSB28 PSAE-1 ATPAO5 AT4G30020 VEL1 HCF153 PDE334 LUG ATHB-8 SEP1 SLP2 HCF244 MCA1 NDH-M AtVAB2 AtFBA2 VHA-A3 SAMC1 OHP 54CP AT5G06970 AT5G08390 PMDH2 AT5G10020 AT5G10390 AtMYB3R4 ATNADP-ME2 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 ATCYP20-2 CRN EMB3136 CCS52B AT5G13980 ENH1 ATSRA1 EMB40 ATOEP80 TUA3 TUA5 CRR42 H2B CaS HCF136 TUB8 AT5G23910 ATSIG5 AT5G27560 AMOS1 atylmg3 ATPRFB AT5G38520 CRR7 ATUBC8 ATGLK2 TUB4 Encodes the mitochondrial ATP synthase subunit delta. LPA66 AT5G50180 AT5G50420 AT5G51110 LPA2 EXL3 CRR1 CCB2 AT5G52780 AT5G52960 CcdA ATMAP65-1 GDPDL4 ATKCO1 NAP1;3 NPL1 NdhN AT5G58330 GIL1 AT5G59690 HTA6 AT5G59970 TUB3 AT5G65360 BAM1 ATLFNR1 MSP-1 ICU2 PSBA PSBK PSBI ATPH PSBD PSBC YCF3 NDHJ NDHC YCF4 PETA PSBL PSBF PETG RPS18 PSBB PSBN PSBH PETD YCF5 NDHI NDHA
GO:0006364 rRNA processing	BP	4.271e-61	AT1G02150 FZL PSB27 POR ATHM1 LIP2 emb2394 RHON1 OE23 PSAO ABC1 AVDE1 CRB CLPP6 ATSRS GAPA-2 NDF6 LHCA2*1 ATLFNR2 PRK AT1G32470 PRPL11 RPL21C PMI1 GAPB CP22 Lhca5 AT1G52220 PSAH-2 AtTLP18.3 ATSCO1 AT1G67700 PSBY ATHPR1 FLN2 HEMB1 AT1G70200 emb2184 LQY1 AT1G76450 APG2 RNE ATGLK1 PSB29 AtFBA1 AT2G26500 ALB3 PBCP PSBW FTSH2 GDCH AT2G35410 AT2G37660 LHCB4.3 AT2G43030 AT2G43560 PSAP ATCYP38 AT3G06980 LHCB4.2 ABCI6 emb2738 AT3G13120 AT3G13180 ATKRS-2 FLU PRPS20 PSAH-1 HCF107 PSBTN AT3G23700 HCF101 PLSP1 AtCHUP1 ATPRX GAPA CCB1 LHCB2 AT3G28460 PTAC16 AT3G47070 AT3G47650 GSA2 OEC33 AT3G51140 ATG4 HCEF1 LHCA1 PPL1 SBPASE ACSF AT3G59040 GUN4 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. AT3G61870 CSP41A TROL AT4G02530 PSAD-1 PETC EMB2369 ATPC1 APX4 ATPD LHCB5 PSAL LIL3:1 CH-42 PTAC14 PSBQ PGR5-LIKE AT4G24750 ACP4 CHLM PSAE-1 PDE334 AT4G33760 SEP1 AT4G34730 HCF244 ACD2 AtFBA2 SAMC1 LHCB4.1 ATMTRNASEII AT5G08650 PMDH2 AT5G10605 AT5G11480 EMB3136 EMB2247 ENH1 ATOBGC PCB2 ADG2 CaS HCF136 ARRPS1 ATPRFB AT5G38520 ATGLK2 AT5G46420 AT5G50110 AT5G51110 LPA2 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. NPL1 AT5G58330 EMB3144 ATLFNR1 MSP-1
GO:0016072 rRNA metabolic process	BP	4.271e-61	AT1G02150 FZL PSB27 POR ATHM1 LIP2 emb2394 RHON1 OE23 PSAO ABC1 AVDE1 CRB CLPP6 ATSRS GAPA-2 NDF6 LHCA2*1 ATLFNR2 PRK AT1G32470 PRPL11 RPL21C PMI1 GAPB CP22 Lhca5 AT1G52220 PSAH-2 AtTLP18.3 ATSCO1 AT1G67700 PSBY ATHPR1 FLN2 HEMB1 AT1G70200 emb2184 LQY1 AT1G76450 APG2 RNE ATGLK1 PSB29 AtFBA1 AT2G26500 ALB3 PBCP PSBW FTSH2 GDCH AT2G35410 AT2G37660 LHCB4.3 AT2G43030 AT2G43560 PSAP ATCYP38 AT3G06980 LHCB4.2 ABCI6 emb2738 AT3G13120 AT3G13180 ATKRS-2 FLU PRPS20 PSAH-1 HCF107 PSBTN AT3G23700 HCF101 PLSP1 AtCHUP1 ATPRX GAPA CCB1 LHCB2 AT3G28460 PTAC16 AT3G47070 AT3G47650 GSA2 OEC33 AT3G51140 ATG4 HCEF1 LHCA1 PPL1 SBPASE ACSF AT3G59040 GUN4 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. AT3G61870 CSP41A TROL AT4G02530 PSAD-1 PETC EMB2369 ATPC1 APX4 ATPD LHCB5 PSAL LIL3:1 CH-42 PTAC14 PSBQ PGR5-LIKE AT4G24750 ACP4 CHLM PSAE-1 PDE334 AT4G33760 SEP1 AT4G34730 HCF244 ACD2 AtFBA2 SAMC1 LHCB4.1 ATMTRNASEII AT5G08650 PMDH2 AT5G10605 AT5G11480 EMB3136 EMB2247 ENH1 ATOBGC PCB2 ADG2 CaS HCF136 ARRPS1 ATPRFB AT5G38520 ATGLK2 AT5G46420 AT5G50110 AT5G51110 LPA2 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. NPL1 AT5G58330 EMB3144 ATLFNR1 MSP-1
GO:0022607 cellular component assembly	BP	1.755e-60	LPA1 FZL PSB27 POR ATHM1 TOR2 AT1G05140 AT1G05150 emb2394 LPA19 UGT1 RHON1 OE23 PSAO ATSYP111 AT1G09200 CRB CLPP6 ATSRS GAPA-2 AT1G14270 AT1G14345 CYCA2;3 NDF1 HCF173 ARF5 TUB5 ATLFNR2 ATSCAR3 AT1G29700 PRK AT1G32470 RPL21C PMI1 GAPB CP22 Lhca5 AT1G49380 TUA2 AT1G50660 GDC1 HTA10 AT1G52220 PSAH-2 ATBG1 TCP3 AtTLP18.3 ATDEK1 CCB4 AT1G59860 ABC4 AtNIK3 ATFD2 AT1G60990 ATSCO1 AT1G64355 AT1G64500 TUA1 Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication). 4CL3 cICDH AT1G67700 PSBY ATHPR1 AT1G68110 CER6 AT1G69420 AtCPB LPA3 IQD31 NDH-O emb2184 LQY1 ATCLV1 AtVAB1 PSBR ATNADP-ME4 APG2 ATMAP65-6 STI AT2G04280 OTP51 ATGLK1 PSB29 AtFBA1 IAA8 AT2G24060 AT2G25270 AT2G25430 AT2G25830 OVA4 AT2G26500 AT2G26730 AGO4 CH-CPN60A VHA-A1 HIS4 ALB3 ATEXP6 TUB7 ATVLN1 PBCP KIS PSBW FTSH2 TCP10 ARASP ATRANGAP2 AIR9 ATHB-14 GDCH SKL2 ATFTSZ2-1 ABCB1 AtAUX1 ATSCAR2 MAP65-5 PnsL1 ATVLN2 AT2G42510 AT2G43030 BIO2 AT2G43560 AT2G43945 AFO PLIM2a AT2G45990 PSAP AtTic20-II CRR6 ATCYP38 ATN AT3G06980 SCPL27 AT3G08680 ABCI6 AT3G12930 ATKRS-2 MEE35 HCF243 AT3G15550 PSAH-1 ATKINESIN-13A HCF107 AT3G17340 EMB1270 PSBTN ATTSO1 KINESIN-12B ATTOPII HCF101 PLSP1 AFH1 ATGHBDH AtCHUP1 LTA2 GAPA CCB1 ATSKL1 AT3G28460 AT3G29185 AT3G43610 AT3G45850 AT3G45930 AT3G47650 OEC33 AT3G51140 CP33 FTSZ2-2 HCEF1 PPL1 SBPASE ACSF PrfB3 ATVLN3 GUN4 AT3G60320 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. CDS5 MAP65-4 AT3G61870 ATL5 CSP41A AtcpRRF EMB3126 TROL ABC1 PSAD-1 PETC EMB2369 ATPC1 PDF2 ATK5 AT4G08280 ATPD PSAL ATSAHH1 KINESIN-12A APS3 TUA6 AFH3 PPD1 AT4G15830 SPK1 LIL3:1 PSBQ ATML1 PGR5-LIKE ARC1 ATRBP31 ACP4 ATCNFU3 MAP65-2 PSB28 PSAE-1 ATPAO5 AT4G30020 VEL1 HCF153 PDE334 LUG ATHB-8 ATH1 SEP1 SSR16 AT4G34730 SLP2 HCF244 MCA1 AT4G36390 NDH-M pde191 AtVAB2 AtFBA2 AT4G39040 VHA-A3 SAMC1 OHP 54CP ATEGY2 NEDD1 AT5G06970 AT5G08390 PMDH2 AT5G10020 AT5G10390 KAC1 ATSPS2F AT5G11480 AtMYB3R4 ATNADP-ME2 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 ATCYP20-2 CRN EMB3136 CCS52B AT5G13980 EMB2247 ENH1 ATSRA1 EMB40 EMB3013 ATOEP80 TUA3 TUA5 CRR42 AT5G22340 emb1211 H2B CaS HCF136 TUB8 AT5G23910 ATSIG5 AT5G27560 AMOS1 atylmg3 ATPRFB AT5G38520 CRR7 ATUBC8 ATGLK2 TUB4 AT5G46580 Encodes the mitochondrial ATP synthase subunit delta. AT5G47190 FRA1 ADG1 LPA66 OVA2 AT5G50180 OLD5 AT5G50420 AT5G51110 LPA2 EXL3 CRR1 CCB2 AT5G52780 AT5G52960 AT5G52970 CcdA ATMAP65-1 GDPDL4 ATKCO1 NAP1;3 APO2 NPL1 NdhN AT5G58330 GIL1 AT5G59690 HTA6 AT5G59970 LecRK-I.9 COB TUB3 ALX8 AT5G65360 BAM1 ATLFNR1 AT5G66470 MSP-1 ICU2 PSBA PSBK PSBI ATPH PSBD PSBC YCF3 NDHJ NDHC YCF4 PETA PSBL PSBF PETG RPS18 PSBB PSBN PSBH PETD YCF5 NDHI NDHA
GO:0016051 carbohydrate biosynthetic process	BP	1.874e-60	AtFKGP ATGPAT4 AtSAM1 ATCSLD5 AtBE2 POR ATHM1 AT1G04040 AT1G04430 AT1G04680 TOR2 ATCTL1 ATGSL07 AT1G07280 AT1G07440 AT1G09440 ACLA-1 AT1G10740 ATSS3 ATGLX1 ELP AT1G12800 GATL3 AT1G18460 NDF6 TUB5 ARAC4 DRT112 AT1G22630 Cpn60beta4 ARAB-1 IMPL1 AK-HSDH FEI1 CYP97A3 GBSS1 ACC1 GAPB AtcFBP CP22 ACD1 AtPMEAMT ACT8 AT1G49380 mMDH1 ATMUM4 ABCD2 AT1G54790 UKL3 ATCSLE1 AT1G56190 AT1G56500 SQE1 ATB2 ATSCO1 AT1G62780 NRS/ER TUA1 AT1G65230 cICDH RGL AT1G66430 DIN9 CER6 AT1G68600 PG2 AT1G70550 PGM2 AT1G71070 AT1G72230 AT1G73600 AT1G73655 UMAMIT5 AtGH9B7 AT1G76450 AT1G77090 LAX3 AT1G78040 ATTPPB ATGSTU20 ATRHM1 ATTPS1 AtkdsA1 ATNADP-ME4 APG2 RGA AT2G03420 AT2G04700 EXGT-A1 AKN1 ATCLASP ALF1 PDTPI AtFBA1 CSI1 AT2G22230 ATIPS2 AT2G23390 AGO4 TUB7 PY ATFC-II AT2G31040 ATGSL03 BAM6 GALS1 FEI2 AT2G35840 NHL12 AT2G36145 AtAUX1 GAUT7 CYT1 ATISA1 NTRC Encodes a defensin-like (DEFL) family protein. AtGolS1 PHR2 PnsL3 ATRGP1 GAUT9 ATF1 AT3G02750 ATGSTF11 AtUGP1 EMB3119 ATCSLC06 AT3G09050 CRM3 OMR1 PAL4 LSF2 ACT11 PGK1 ESM1 ATGSL04 ATRHM3 ATHM4 AT3G15570 MFP1 NDF4 EMB2083 AT3G16370 EMB1270 AT3G18500 ACT2 AT3G19000 CBB1 AT3G20390 APS1 AT3G23090 HCF101 GAUT8 AFH1 GAMMA-TIP2 GAPA ABCB19 AT3G29185 AT3G48200 AT3G48420 AT3G48460 BAM2 AT3G51510 AT3G52500 FTSZ2-2 HCEF1 PMR6 PDE329 SBPASE AT3G56010 AT3G57220 GAUT15 AT3G59780 AT3G60750 GAUT1 CP12 OEP6 AT4G00560 MGP4 ATXT2 EMB3129 AFB1 AT4G04340 ATPC1 Encodes a putative glycosyl hydrolase family 10 protein (xylanase). APX4 ATPD AT4G10300 SKU5 CYP83A1 ATSAHH1 AT4G14360 TUA6 ATOPT3 AtBAM3 ATTPS5 ATSS4 BAM3 AT4G20760 ATRP1 sks4 PGR5-LIKE ATCSLG3 ATCSLG1 PGI AtFBA5 GDPDL3 VTC2 ATK2 AT4G27435 AT4G30020 PGR3 AT4G32330 AtCESA1 AtGLDP1 ATHDA14 AT4G33500 ATCAP1 XCP1 AFT AT4G36180 AT4G36530 ACD2 ATROPGEF1 AtVAB2 AtFBA2 APL3 ATCESA2 ATIPS1 AKN2 AT5G01090 ATPDX1 AT-HSC70-1 AT5G02940 SBE2.2 ATLDA ATCESA3 TBR ATMYB29 CESA5 ATMIPS3 PAS2 PPD5 ATNADP-ME2 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 ATGSL12 AT5G13140 IQD11 SIG4 AT5G14970 GAUT14 LNG1 AtNIK1 VAT1 BCCP AtMYB43 MEX1 BAM9 ADG2 ATCPN21 CaS TUB8 ATSS1 AT5G26330 AT5G27560 AT5G28500 GME CAC2 atylmg3 CRR7 DEG8 RS5 TUB4 AT5G44520 AT5G46420 GAUT4 ADG1 AT5G48590 ATGH9A1 ATTPPA ATPGMP AT5G53340 GLT1 AtPLR1 THI1 VTC5 AT5G55220 ATMAP65-1 AtIAMT1 ATKCO1 APO2 NPL1 NdhN AT5G58330 AT5G58520 AT5G58540 CLB4 COB AtMYB28 ATGT18 DXR SHA1 JK218 CESA6 BAM1 IRX15-L
GO:0000097 sulfur amino acid biosynthetic process	BP	3.226e-60	AT1G01630 AtSAM1 POR AT1G05150 ATCTL1 OE23 EMB2784 PSAO AT1G09310 AtHIR1 ACLA-1 ATGLX1 AT1G11860 ELP AT1G12800 AFB3 CP24 ATSOT17 DRT112 AOAT1 PSAK PSAF ATROPGEF14 ACBP PRK AT1G32470 AT1G33110 AT1G35420 expressed protein localized to the inner membrane of the chloroplast. GAPB CP22 PSAH-2 AtTLP18.3 AT1G55260 AT1G55360 PSAG ATSERAT2;1 AT1G56190 ATATP-PRT1 AT1G60000 LHCA3 ACO2 FMO AT1G66430 PSBY AT1G67950 ATHPR1 AT1G68260 AT1G70280 AT1G72500 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PETE1 ACR3 AT1G78040 PSBR AT2G05920 ATHNIR ALF1 LIP1 PDTPI AtFBA1 AT2G22230 SCPL8 ATMES3 ALDH11A3 ATCOQ3 AT2G31670 GDCH SKL2 BLH1 PnsL1 ATKT2 AT2G42220 AT2G42690 ATLEUD1 ACS1 CAO AtCGS1 ATMS2 EMB3119 ATCYSD1 LHCB4.2 ADK1 ABCI6 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 ATSERAT2;2 FLU JAL35 ECT6 BCAT4 CBB1 ADOF2 AT3G22520 ATSAHH2 ATGHBDH ATPRX AT3G26450 GAMMA-TIP2 ATSKL1 CAB4 GSA2 ATG4 FTSZ2-2 AtPIP2;1 AT3G54400 SBPASE ACSF PIF5 GUN4 AT3G60750 ARATH;BSAS3;1 CYP20-3 TROL AT4G01310 EOL1 PSAD-1 APR ATPC1 LHCB5 CYP83A1 AtCLA1 PRXR1 ATSMO1-2 AT4G23670 CER2 ATK2 PSAE-1 AtGLDP1 KUP5 AT4G33740 CCoAOMT1 MCA1 AQI ROC1 ATPRP4 AtFBA2 CYP79B2 AT5G01020 AT5G01090 SIR AT5G08430 AtPPa6 AST68 PAS2 TUB6 ATCYP20-2 AT5G13140 AT5G13980 AT5G14120 AT5G14500 GASA4 ATCIMS PCB2 AT5G19940 ATCPN21 IMS3 CaS ATCYSD2 DES1 ATGSL1 AT5G41760 AT5G44020 APE2 TET1 FRA1 ATGH9A1 AT5G50000 AT5G51140 ATMAP65-1 PSAN ASN2 MSP-1
GO:0042254 ribosome biogenesis	BP	6.782e-60	AT1G02150 FZL PSB27 POR ATHM1 LIP2 emb2394 RHON1 OE23 PSAO ABC1 AVDE1 CRB CLPP6 ATSRS GAPA-2 NDF6 LHCA2*1 ATLFNR2 AT1G29070 PRK AT1G32470 PRPL11 RPL21C PMI1 GAPB CP22 Lhca5 EMB3105 AT1G52220 PSAH-2 AtTLP18.3 ATSCO1 AT1G64510 AT1G67700 PSBY ATHPR1 FLN2 HEMB1 AT1G70200 emb2184 LQY1 AT1G76450 APG2 RNE ATGLK1 PSB29 AtFBA1 AT2G26500 ALB3 PBCP PSBW FTSH2 GDCH AT2G35410 AT2G37660 LHCB4.3 AT2G43030 AT2G43560 PSAP ATCYP38 AT3G06980 LHCB4.2 ABCI6 emb2738 AT3G13120 AT3G13180 ATKRS-2 FLU PRPS20 PSAH-1 HCF107 PSBTN AT3G23700 HCF101 PLSP1 AtCHUP1 ATPRX GAPA CCB1 GHS1 LHCB2 AT3G28460 RPL9 PTAC16 AT3G47070 AT3G47650 GSA2 OEC33 AT3G51140 ATG4 HCEF1 LHCA1 PPL1 SBPASE ACSF AT3G59040 GUN4 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. AT3G61870 CSP41A TROL AT4G02530 PSAD-1 PETC EMB2369 ATPC1 APX4 ATPD LHCB5 PSAL AT4G17560 LIL3:1 CH-42 PTAC14 PSBQ PGR5-LIKE AT4G24750 ACP4 CHLM PSAE-1 PDE334 AT4G33760 SEP1 SSR16 AT4G34730 HCF244 ACD2 AtFBA2 SAMC1 LHCB4.1 ATMTRNASEII AT5G08650 PMDH2 AT5G10605 AT5G11480 EMB3136 EMB3137 EMB2247 ENH1 ATOBGC PCB2 ADG2 CaS HCF136 ARRPS1 ATPRFB AT5G38520 ATGLK2 AT5G46420 AT5G47190 AT5G50110 AT5G51110 LPA2 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. NPL1 AT5G58330 EMB3144 AT5G65220 ATLFNR1 MSP-1
GO:0022613 ribonucleoprotein complex biogenesis	BP	1.132e-59	AT1G02150 FZL PSB27 POR ATHM1 LIP2 emb2394 RHON1 OE23 PSAO ABC1 AVDE1 CRB CLPP6 ATSRS GAPA-2 NDF6 LHCA2*1 ATLFNR2 AT1G29070 PRK AT1G32470 PRPL11 RPL21C PMI1 GAPB CP22 Lhca5 EMB3105 AT1G52220 PSAH-2 AtTLP18.3 ATSCO1 AT1G64510 AT1G67700 PSBY ATHPR1 FLN2 HEMB1 AT1G70200 emb2184 LQY1 AT1G76450 APG2 RNE ATGLK1 PSB29 AtFBA1 AT2G26500 ALB3 PBCP PSBW FTSH2 GDCH AT2G35410 AT2G37660 LHCB4.3 AT2G42510 AT2G43030 AT2G43560 PSAP ATCYP38 AT3G06980 LHCB4.2 ABCI6 emb2738 AT3G13120 AT3G13180 ATKRS-2 FLU PRPS20 PSAH-1 HCF107 PSBTN AT3G23700 HCF101 PLSP1 AtCHUP1 ATPRX GAPA CCB1 GHS1 LHCB2 AT3G28460 RPL9 PTAC16 AT3G47070 AT3G47650 GSA2 OEC33 AT3G51140 ATG4 HCEF1 LHCA1 PPL1 SBPASE ACSF AT3G59040 GUN4 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. AT3G61870 CSP41A TROL AT4G02530 PSAD-1 PETC EMB2369 ATPC1 APX4 ATPD LHCB5 PSAL AT4G17560 LIL3:1 CH-42 PTAC14 PSBQ PGR5-LIKE AT4G24750 ACP4 CHLM PSAE-1 PDE334 AT4G33760 SEP1 SSR16 AT4G34730 HCF244 ACD2 AtFBA2 SAMC1 LHCB4.1 ATMTRNASEII AT5G08650 PMDH2 AT5G10605 AT5G11480 EMB3136 EMB3137 EMB2247 ENH1 ATOBGC PCB2 ADG2 CaS HCF136 ARRPS1 ATPRFB AT5G38520 ATGLK2 AT5G46420 AT5G47190 AT5G50110 AT5G51110 LPA2 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. NPL1 AT5G58330 EMB3144 AT5G65220 ATLFNR1 MSP-1
GO:0046148 pigment biosynthetic process	BP	9.938e-59	POR LIP2 encodes a flavonol-7-O-rhamnosyltransferase involved in the formation of rhamnosylated flavonols HPD ALB-1V ABC1 AVDE1 CRB ACLA-1 AT1G11860 AT1G12800 NDF1 AT1G16080 AT1G18440 NDF6 AOR UGT78D1 CYP97A3 ACT1 PRPL11 AT1G36280 GAPB AT1G49380 AtTLP18.3 ZKT CPN60B AT1G56050 AT1G56500 AT1G57770 AtHEMA1 4CL3 AT1G65230 AT1G67700 CER6 HEMB1 AT1G73110 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. ATKAS2 emb2184 AT1G76450 ATRHM1 AT1G80030 ATGLK1 LIP1 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA AtFBA1 AT2G21385 CYP711A1 ER ATCDPMEK AT2G27680 ATFC-II AT2G32640 EDA3 AT2G35390 AT2G35410 SKL2 ATSIG6 AT2G37660 AT2G40400 HEME2 NTRC AT2G42690 AT2G43030 FAB2 ACS1 AT2G44920 PHR2 ATCYP38 ATPPT2 PDE326 AT3G03770 PDE181 AT3G08030 AtLCY DGD1 ATHST AT3G13120 FLU PRPS20 ADS3 EMB1865 GluTRBP UGT84A2 ELIP bHLH34 AT3G23700 HCF101 ATPRX ORF02 ATSKL1 AT3G28220 PTAC16 AT3G48420 GSA2 AT3G50685 F3'H ATG4 CYP97C1 AT3G53960 HCEF1 A11 AT3G56680 ACSF PIF5 GUN4 AT3G59780 AT3G61870 CYP20-3 ATMYB11 APG3 CSP41A ATCCD1 TROL AT4G02530 ATPC1 APX4 ATPD The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. PDE226 ELIP2 AtCLA1 LIL3:1 MYC4 CH-42 CCD4 CHLM B1 CGA1 AtFBA5 ATK2 CIP7 emb2726 FAD6 ATH1 AtGLDP1 SEP1 ASE2 HCF244 ACD2 AtFBA2 AT4G39040 SQD2 FD-GOGAT AtCHIL AT5G07020 CYP75B1 AT5G08050 ATFLS1 AT5G08650 PMDH2 ABAR ATCHS UGT78D2 PSY PCB2 AtHBP5 HCF136 ARRPS1 ABCI21 ATGLK2 ATFKBP13 CHL AMK2 KAT5 OVA2 ATMYB111 B2 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. ATOMT1 AT5G55220 GATA21 LUT2 NdhN CLB4 AT5G62210 DXR ABA1
GO:0006629 lipid metabolic process	BP	2.501e-58	AT1G01080 KCS1 ATGPAT4 PIP1;3 AT1G02150 AtD27 POR KCS2 AT1G04420 LIP2 emb2394 5PTASE13 AT1G06550 HPD encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase EMB2784 KCS3 FATB ALB-1V ABC1 AVDE1 ATSYP111 CRB iPGAM1 ACLA-1 AT1G10900 ATFD1 CLPP6 AT1G11860 AT1G12080 ATNRT1 AT1G12800 ORP1D AT1G13650 AT1G14270 SBH2 AT1G14345 PSS1 NDF1 ADAP AT1G16080 UP6 FUG1 AT1G18460 AT1G18660 LHCA2*1 KCS4 AT1G19710 CVP1 ATPIP5K1 AOAT1 AOR CER60 Cpn60beta4 AT1G27480 AT1G28600 AT1G28610 AT1G28660 ARAB-1 AT1G29660 AT1G29670 PDH-E1 AT1G30690 IMPL1 CYP97A3 ACT1 PKp3 GBSS1 PRPL11 AT1G33700 AT1G33811 EMB3003 EMB2756 ACC1 ATNR2 GAPB AT1G44920 AtBGAL5 ATTLL1 5PTASE11 DGAT3 ACD1 AtPMEAMT AT1G49380 LACS2 AtCXE5 AT1G49740 GDC1 Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols. ATBG1 AtFAP3 ACP2 ATATG18H AtTLP18.3 AT1G54790 ATLOX1 AT1G55260 ZKT CPN60B AT1G56500 AT1G57770 SQE1 RXW8 ABC4 KAS AT1G62660 AT1G62780 LACS3 BDG1 AT1G65230 ATLOX6 AT1G67700 ATKCR1 ATFXG1 CER6 PSRP3/1 AT1G71710 EDA17 AT1G73110 AT1G73170 AT1G73650 AT1G73740 AT1G74070 ATKAS2 emb2184 AtGH9B7 sks5 AtHMGR1 AT1G77090 LACS9 LAX3 PIP5K2 ATGA2OX1 ATLUP1 AtkdsA1 ATNADP-ME4 AT1G80030 AT2G03420 AT2G03980 LACS8 FLA7 ENR1 EXGT-A1 AtXYP2 AGP9 KCS9 HY3 ALF1 LIP1 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21860 AT2G22230 ATIPS2 SCPL8 AT2G23390 YCF37 AT2G24060 CYP711A1 FDH HO2 KCS11 AT2G26730 ATCDPMEK AT2G27290 AT2G27680 PY AtFAD3 ATFC-II AT2G32640 ATCB5-B AtCLO3 PRPL28 AT2G34590 ATFAH1 EDA3 AT2G35410 SKL2 AT2G35880 ATSIG6 AT2G37660 CAC3 ATMVD1 NTRC AT2G42130 ATPPC2 AT2G42690 AT2G43030 BIO2 AT2G43560 FAB2 ACS1 5PTase12 AT2G44920 AT2G44970 AT2G45180 BEN1 ATPEX16 CYP86A8 AtSLD2 CER8 PHR2 AT2G47780 DEG2 AtSS2 ATCYP38 ATKT4 ATF1 ATGSTF11 PDE326 EMB3119 PDE181 AT3G05180 AT3G06980 AT3G08680 PTAC13 ATPAH1 PIP5K9 AtLCY AHB2 AT3G10720 AtFAD7 AT3G11210 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. DGD1 ATHST FAD2 PGK1 AT3G12930 AT3G13120 PUT4 CYP90D1 FLU ESM1 AT3G14220 AT3G15520 ADS3 MFP1 NDF4 AT3G16370 AAE7 ATACP5 NMT1 EMB1865 CBB1 GLTP3 PKP-ALPHA AT3G23510 AT3G23530 AT3G23700 HCF101 ATGHBDH AAPT2 AT3G25660 AT3G25805 LTA2 ATPRX ORF02 CCB1 ATSKL1 AT3G28200 AT3G29185 AAO2 LTPG2 RPL9 PTAC16 ATPLC8 AT3G47650 AT3G48420 AT3G48460 ARLA1C AT3G50685 AT3G51090 LTP5 ATG4 PSRP2 CP33 ELL1 AT3G53100 CYP97C1 HCEF1 AT3G54210 AT3G54290 PLA PGPS2 ATTSC13 SBPASE AT3G56010 UGP3 ACSF ATWRKY69 PIF5 GUN4 AT3G59780 CDS5 AT3G60750 ARATH;BSAS3;1 AtSLD1 AT3G61870 CYP20-3 APG3 AtFAP1 AtcpRRF PLA APG1 EMB3126 ATCCD1 ATT1 AtGPAT8 TROL AT4G01310 ATGPAT3 AT4G02530 EMB3129 ATPC1 AT4G05090 APX4 AT4G09630 ATPD AT4G10060 ATSPS4F AT4G10300 FLA2 AT4G13050 AT4G13550 CYP83A1 PDE226 ATECI3 APS3 CYP97B3 ATCCT2 AtCLA1 SPK1 CLPR4 AT4G17560 LIL3:1 AT4G17650 AT4G17740 AT4G18030 ATSS4 CH-42 AT4G18970 AT4G19460 PTAC14 ATRAB8D ATFAH2 sks4 ATSMO1-2 CER2 PGI ATHB22 AT4G24750 ACP4 CHLM B1 GDPDL3 AT4G26710 AT4G26790 FAD4 ATK2 CIP7 NARA5 AT4G28080 PSB28 AT4G28780 emb2726 FAD6 AT4G31530 HCF153 EMB2797 PGR3 AT4G32590 ATSDX1 ATH1 AtGLDP1 AT4G33110 FAB1A ATHDA14 ATOST1 AT4G34090 SEP1 CLB6 ERG9 SQS2 MRL1 AT4G34920 HCF244 MCA1 AT4G36390 AtGGPPS11 ACD2 SQE3 AT4G38690 AtFBA2 AT4G39040 SHL1 ATSEC14 ATIPS1 SQD2 Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. SBE2.2 54CP FD-GOGAT ATLDA KCS19 SIR ACR12 AT5G04980 ATCESA3 AtFAD8 ATEGY2 AT5G07020 ERL2 FTRA2 AT5G08415 AT5G08650 PI-4KBETA2 PMDH2 ATMIPS3 PAS2 AT5G10690 ATSPS2F PPD5 TUB6 DiT1 ATPDAT EMB3137 AT5G14410 AT5G14460 ATDEF2 AT5G14910 AtENODL17 BCCP2 AT5G16240 BCCP LRR1 PSY MEX1 AT5G17670 PCB2 AtHBP5 ATMGD2 ATCPN21 AT5G21100 AT5G21105 CaS HCF136 SQE5 AT5G24155 ATSS1 ARRPS1 CAC2 AT5G40500 AOS NDH18 KCS20 AT5G45280 AT5G45670 ATFKBP13 CHL AT5G45950 KAS1 LIL3:2 FPS1 AMK2 AACT2 ADG1 KAT5 OVA2 ACLB-2 AT5G50000 AT5G51140 ATPGMP B2 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. ATOMT1 AHL RPL24 AT5G55220 GDPDL4 AT5G56040 ATPEX5 LUT2 PSD2 CER3 NdhN FOLK ATPLC5 AtcPT4 CLB4 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AtTudor2 DXR AT5G62930 ATNDPK2 ALX8 AT5G66470 ABA1 ACCD NDHE
GO:0034641 cellular nitrogen compound metabolic pro...	BP	4.043e-58	LHY AtFKGP encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT1G01320 ASG4 GAE2 AT1G02110 AT1G02150 AtSAM1 ATCSLD5 FZL PSB27 POR ATHM1 IAA3 AXR3 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase LIP2 ATGTF2H2 AT1G05150 emb2394 LPA19 BT3 ATMYB13 RHON1 OE23 SR45a ATPCNA1 AT1G07440 GATA11 AXS2 PSAO ALB-1V ABC1 AVDE1 AtMYB60 CRB AT1G10120 ATGSTU18 ATGSTU17 ACLA-1 EMB3103 ATFD1 CBRLK1 CLPP6 ATSRS AT1G12244 PHR1 AT1G12800 AFB3 ICE2 GAPA-2 AT1G13730 PnsL2 AT1G14345 AtMYB124 AT1G14460 AT1G14600 CYCA2;3 FDM1 AT1G15920 NDF1 ADAP AT1G16080 ATMYB58 AT1G16680 FUG1 GLYR2 AT1G18060 BEE1 AT1G18440 AT1G18485 ATSOT17 AtMYB47 NDF6 LHCA2*1 BES1 AT1G19490 ATCLH1 BEL10 ARF5 ATLFNR2 CVP1 DRT112 AT1G21060 ATNADK2 AGL87 AT1G22630 FB AT1G22910 ATCAF2 AOR MLP423 UGT74B1 ASB1 BBX15 Cpn60beta4 AT1G26790 AtHB23 SPL11 AT1G27480 SRD2 AT1G29950 PDH-E1 ARF6 GlcNAc1pUT1 AT1G31710 CYP97A3 AT1G31920 PRK ATNSI ACT1 KAN2 NRT1.5 AT1G32470 PRPL11 AT-GTL1 AT1G33470 AT1G33600 AT1G33700 EMB2756 AT1G35560 RPL21C AT1G36280 ATNR2 PMI1 GAPB ATSDC1 CYCA1;1 CP22 ATMCM2 ABF2 Lhca5 DYW1 GATB AtPMEAMT AT1G49010 AT1G49380 FTSH1 AT1G50270 SCL-3 POLGAMMA2 GDC1 AT1G51080 AT1G51110 4CL.1 ADOF1 AT1G52220 PSAH-2 ATFPG-1 AT1G52510 SPA4 FTM6 TCP3 ATMUM4 AT1G54500 AtTLP18.3 AtIDD7 NDF5 PSAG HAC04 AT1G56050 ATDI19 ATNAS4 AT1G56500 ATATP-PRT1 AtHEMA1 SQE1 CRR28 ARF1 AT1G60590 ABC4 ATRECQ4B AT1G62250 FMO AT1G62660 ATSCO1 AT1G62780 NRS/ER NRPD1 AT1G63640 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT1G64680 NDF2 RPOD1 AT1G65070 AT1G65230 ATPAO4 cICDH ZFP4 ATGSR2 AtMYB20 EMB2814 AT1G67700 PSBY CSK ATHPR1 AtIDD14 CER6 AT1G68810 BIM2 FLN2 AGO7 AtTCP15 HEMB1 CMT3 AT1G70000 SNL4 EMB25 AT1G70200 ATCYCD1;1 AT1G70280 ABCB26 MMZ2 CRR23 AT1G70770 AT1G71480 AT1G72270 ATPIN1 AtEIL3 BBX16 SPPA AT1G74070 ATSOT18 ATSOT16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G74840 ATKAS2 emb2184 UMAMIT5 LQY1 AtVAB1 AT1G76110 AT1G76120 CYCB2;4 AT1G76350 AT1G76450 AtHMGR1 AT1G76570 AT1G76880 AT1G77090 AT1G77310 AT1G78010 RAP2.4 ATGSTU20 ATSHB ATRHM1 ATGGH2 AT1G78995 APL AT1G80850 APG2 AT2G01210 MEE65 RPI2 RGA ARR14 AtIDD5 AT2G03390 AT2G03420 RNE EMB2761 AT2G05920 AtOPR3 AT2G07170 AT2G07689 AT2G13440 MCM9 AT2G14910 OTP51 MCM4 ADC1 AT2G17972 ATBZIP2 SCY1 HY3 ATHMA4 ATGLK1 ALF1 LIP1 AtERF53 PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 ATRL2 AT2G21960 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. ATIPS2 AGL22 IAA8 SCPL8 DEAR3 AT2G23360 NAPRT2 YCF37 BLH4 AT2G24060 PRPL35 PDE319 ATRPA2 AT2G24580 ESE2 AT2G25830 OVA4 ATHSFA2 AT2G26500 ATDUF3 HO2 ATCDPMEK AGO4 LHW AT2G27290 ATNLP1 AT2G27680 AT2G28200 DRB2 RAP2.7 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 ALB3 ADCS AT2G29180 PY ATVLN1 PBCP AT2G30320 ATFC-II PSBW CYP71A13 ATCOQ3 FTSH2 TCP10 ATERF15 BBX25 ATNTH1 AT2G31670 ATCOP1 ATSUVH2 AT2G33550 ATUBC24 ATHB-14 EDA3 GDCH AT2G35390 AT2G35410 SKL2 AT2G35640 ATERF38 AT2G35760 BLH1 ATE2FA AT2G36145 AT2G36200 AT2G36350 DML1 GAMMA-TIP MAT3 ATSIG6 ATPAL1 UMAMIT13 AS1 AT2G37660 PDX1L4 ATPDX1.1 ATSCAR2 RDO2 PnsL1 LHCB4.3 AT2G40260 AT2G40400 HEME2 ATKT2 ETG1 AT2G41130 SSL2 ARR8 NTRC ATVLN2 AGK1 AtSPL9 ATBZIP34 AT2G42510 ATPAO2 AT2G43030 ATLEUD1 BIO2 AT2G43500 AT2G43560 FAB2 ACS1 BGLU26 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. KPHMT1 AT2G46250 SPA1 ARF11 AT2G46810 PSAP PIL1 SPL1 ATDUF5 ATMYB12 PHR2 ATCFM2 ATHB-1 ATCYP38 ATBCA1 ATRGP1 RAD23-3 ATF1 AT3G02820 ATGSTF11 PDE326 IAA16 EMB3119 RALFL22 AIF1 AT3G06410 GATA15 AT3G06980 AT3G07270 AT3G08030 LHCB4.2 AT3G09050 ATHY2 PTAC13 AT3G09580 CRM3 ADK1 GYRB1 ABCI6 AT3G10840 DGD1 emb2738 AT3G12210 PGK1 AT3G13000 AT3G13040 ATSERAT2;2 AT3G13120 AT3G13180 AT3G13226 ATKRS-2 AT3G13510 AT3G13740 AT3G14067 FLU ESM1 ATPME3 AT3G14330 ATRHM3 AT3G14890 HEME1 IDM1 MEE35 PRPS20 SPL5 ATHM4 AT3G15520 AT3G15550 ADS3 MFP1 PSAH-1 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT3G16350 ATEBP HCF107 ECT6 POK1 MAT4 ATCRSH HYH ATACP5 NMT1 WOX1 NRPD2B EMB1865 AT3G18870 AtTic62 BCAT4 AT3G20230 POLGAMMA1 AT3G20680 PSBTN AtBBX32 GluTRBP ADOF2 AT3G22150 AT3G22520 ATTSO1 ELIP APS1 ATCFM3A bHLH34 AT3G23700 GAE6 ATTOPII HCF101 AT-HSFC1 PLSP1 ICK3 ATGHBDH AT3G25570 AtCHUP1 LTA2 RPL15 ATPRX GAPA ATSNM1 CCB1 ATICE1 ATSKL1 DRB3 ATTSO2 LHCB2 AT3G28460 AT3G42660 CHR38 ATGSTU27 ATNIT1 JK224 AT3G45900 ATMYB48 PTAC16 DUT1 AT3G47070 PEX11B ATSMC2 PYE AT3G47650 AT3G47830 ATATM AT3G48200 AT3G48420 GSA2 AT3G49000 OBP1 ICK2 BEH1 OEC33 AtHB28 SRS1 GATA6 AT3G51140 GMD2 AT3G51280 ATSSL4 ATG4 AT3G51950 FTSZ2-2 KIPK CYP97C1 ATPAL2 AT3G53680 PYRR HCEF1 ATPTR1 AT3G54390 ATGR2 LHCA1 PPL1 OVA1 ATDFD SBPASE ESK1 AT3G56010 AT3G56290 AT3G56680 AT3G56870 ACSF AT3G57020 AT3G57030 AT3G57060 BPG2 PrfB3 AGL16 AT3G57800 SPL15 GIS ATWRKY69 AT3G59040 PIF5 GUN4 AT3G59780 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. HAT3 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. MAP65-4 AT3G61080 HD-GL2-1 ARATH;BSAS3;1 ATX3 AT3G61870 CYP20-3 ATMYB11 APG3 ATIPT3 CSP41A OEP6 AtcpRRF OTP86 EMB3126 AT3G63510 ATCCD1 BRCA2(IV) UNE10 YAB3 ANTR2 FDM2 AT4G00560 AT4G00870 AT4G00895 MEE47 TROL AT4G01460 ABC1 HEMG1 AtSAM2 MCM7 AT-RSH1 AT4G02530 EOL1 PSAD-1 EMB3129 AtRBP-DR1 AFB1 PETC EMB2369 APR ATPC1 PDF2 AtMYB74 ATK5 ARGAH2 APX4 AT4G09040 AT4G09630 ATPD AT4G10060 ATDET1 LHCB5 AT4G11100 SPA2 AT4G11175 ATMPK5 AT4G11570 PSAL AT4G12830 EPFL9 CYP83A1 ATSAHH1 KINESIN-12A AT4G14330 bHLH104 NF-YB3 ELIP2 ATTCX2 ATCCT2 AT4G15430 AtCLA1 AT4G16141 PHYD AT4G17560 LIL3:1 AT4G17810 MYC4 APRR2 PHYE DEG5 TCP2 CH-42 AT4G18740 AT4G18810 AT4G18820 CMT2 Encodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death. AK-HSDH AAH PTAC14 PyrD PSBQ ATM4 ATML1 AT4G21770 ATSMO1-2 PGR5-LIKE CRF2 AT4G24350 AGL24 TAR2 AT4G24750 ATRBP31 AT4G24790 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) ACP4 CHLM OTP70 AT4G25280 AT4G25290 CGA1 AtFBA7 AtFBA5 AtWRKY20 MAP65-2 ATK2 AT4G27240 CIP7 NARA5 AT4G28080 AT4G28740 PSAE-1 AT4G28780 emb2726 IAA27 AT4G29100 AT4G29120 AT4G30180 AHA2 GAE1 SARK GGP1 FAD6 ACDO1 PGR3 PDE334 LUG encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHB-8 ATH1 AtGLDP1 ATHDA14 AtHMAC6 AT4G33740 AT4G33760 CCoAOMT1 AT4G34090 SEP1 BLH6 SSR16 ERG9 AT4G34730 ASE2 MRL1 AtMYB32 HCF244 AT4G35270 AT4G36180 GATA7 BGAL3 AT4G36390 BEE2 ATRL3 AtPLT6 BLH2 ACD2 CYP81F3 ANT pde191 AQI AtVAB2 ATMYB4 AtFBA2 AT4G39040 VHA-A3 ATSEC14 SAMC1 AT4G39630 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AKN2 CYP79B2 AT5G01020 SQD2 ATPDX1 AIRP2 LHCB4.1 AT5G02160 ATMTRNASEII AT5G02370 AT5G02460 AT5G02710 ATRAB AtNCS1 SBE2.2 54CP GYRB2 ATPAL3 ATLDA BTR1 SIR ATOFP13 NOL ATNAS1 AT5G05180 AT5G05790 2-Cys HAT14 AT5G07020 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ATMYB29 AT5G08050 TCP17 BIM1 ATAIH FTRA2 AT5G08430 PDE340 AT5G08650 AtSRT2 AtPPa6 PMDH2 AST68 ASN3 AIL6 AT5G10605 AT5G10690 AT5G10960 AT5G10970 HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 TINY2 ATNADP-ME2 AT5G12970 ATGSL12 EMB3136 ABAR SVR3 SIG4 CCS52B EMB3137 AT5G14460 AT5G14500 AO AT5G14910 AT5G14970 AT5G15390 AtbZIP3 AT5G15950 AtMYB43 EMB2247 ENH1 PSY MEX1 AT5G17660 anac088 ATSRA1 AT5G18550 ATOBGC PCB2 NSH3 BUD2 ADG2 AT5G19290 ATMGD2 CRR42 ATHMA8 AT5G22020 anac089 IMS3 CaS HCF136 AT5G23280 HMGB6 AT5G23480 SLAH3 ATSIG5 PGL5 LSU2 CRY3 AT5G25590 PYR6 AT5G28300 AT5G28500 GME ARRPS1 AT5G35170 ATGSL1 AHK2 AT5G35970 atylmg3 ATPRFB CAT3 AT5G37010 ARF8 ARLA1A AT5G38520 CRR7 UDG4 ORTH1 DRB5 ATUBC8 AT5G41760 AT5G42070 FTSH5 AOS AT5G43150 SPL2 TZP AT5G44020 ATGLK2 AT5G44520 MCM6 ATFKBP13 AT5G45720 CHL AtNUDT11 AtLARP6a AT5G46390 AT5G46420 bHLH071 PYL1 ATNIG1 AT5G46910 Encodes the mitochondrial ATP synthase subunit delta. AT5G47190 AT5G47390 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT5G47620 NF-YB2 FPS1 FRA1 AMK2 AT5G48220 ADG1 AT5G48360 HINT3 ATCAP-C LPA66 OVA2 DDM2 ATMYB111 ATPPOX AT5G50000 AT5G50110 OLD5 AT5G50370 AT5G51110 AT5G51140 LPA2 At-NEET ATPGMP AT5G52010 CRR1 SCL8 AT5G52660 AT5G52780 ATWRKY27 AT5G52960 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 ATOMT1 PTAC15 THI1 AT5G55220 CRR21 AT5G56840 AT5G56850 GATA21 NAP1;3 CIA2 AHA3 BIO1 ADCL APO2 NPL1 NdhN AT5G58330 EOL2 DDB2 ATUXS3 AtVIP2 ARF4 ATPDX2 CLB4 ATMYB34 PNM1 PIF7 AtMYB28 AtTudor2 ARF1-BP CDF1 AHA11 DXR AT5G62840 BT1 ATNDPK2 AT5G63700 SHA1 ALX8 PSAN ATGCH EMB3144 ASN2 AT5G65220 ATHB-5 KAC2 STR16 ATLFNR1 AT5G66470 AT5G66520 MSP-1 ENY AT5G66770 ICU2 TOE3 AT5G67200 PSBA MATK RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBF PSBE ORF31 PETG PSAJ RPS18 RPL20 CLPP1 PSBB PSBT PSBN PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 NDHB.1 NDHF YCF5 NDHD NDHE NDHG NDHI NDHA RPS15 NDHB.2 RPL2.2 ATP6 NAD5
GO:0006073 cellular glucan metabolic process	BP	2.087e-57	AtFKGP ATCSLD5 AtBE2 POR ATHM1 AT1G04040 ATCTL1 ATGSL07 AT1G07280 AT1G07440 iPGAM1 ACLA-1 ATPMEPCRA ATSS3 ATNRT1 AT1G12500 AT1G12800 NDF6 AT1G22630 FB Cpn60beta4 AT1G30690 IMPL1 AK-HSDH FEI1 CYP97A3 GBSS1 AtcFBP CP22 AtPMEAMT AT1G49380 ABCD2 ATCSLE1 AT1G56190 AT1G56500 ATSCO1 AT1G62780 AT1G65230 AtIDD14 AT1G68600 AXY4 PG2 PGM2 AT1G73600 AT1G73655 ATKAS2 AtGH9B7 AMY2 sks5 AT1G76450 AT1G77090 ATGSTU20 APG2 AT2G03420 AT2G04700 EXGT-A1 ATCLASP ALF1 AtFBA1 AT2G21380 CSI1 AT2G22230 AT2G23390 AT2G25800 KCS11 AT2G26730 AGO4 PY ATFC-II AT2G31040 ATGSL03 BAM6 FEI2 AT2G35880 NHL12 AT2G36145 AT2G37660 CYT1 ATISA1 NTRC Encodes a defensin-like (DEFL) family protein. PHR2 PnsL3 AT3G01810 ATRGP1 ATF1 AT3G02750 ATGSTF11 AtUGP1 AT3G05900 ATCSLC06 AT3G08600 AT3G09050 CRM3 LSF2 PGK1 ESM1 ATGSL04 ATHM4 AT3G15570 MFP1 NDF4 EMB2083 EMB1270 AT3G18500 ACT2 AT3G19000 CBB1 PKP-ALPHA HCF101 AT3G29185 AT3G48200 AT3G48420 AT3G51510 FTSZ2-2 HCEF1 PDE329 SBPASE AT3G56010 AT3G56370 ATVLN3 AT3G59780 AT3G60750 OEP6 ATXT2 EMB3129 XTH9 AT4G04340 ATPC1 APX4 ATPD AT4G10300 SKU5 CYP83A1 AT-BETA-AMY AtBAM3 ATTPS5 ATSS4 AT4G20760 ATRP1 PGR5-LIKE ATCSLG3 ATCSLG1 PGI AtFBA5 GDPDL3 ATK2 AT4G30020 AHA2 PGR3 AT4G32330 AtCESA1 AtGLDP1 ATHDA14 AT4G33500 SLP2 CAT2 AT4G36180 AT4G36530 ACD2 XTH7 AtFBA2 APL3 ATCESA2 ATPDX1 AT5G01590 AT5G02940 SBE2.2 ATLDA ATCESA3 TBR CESA5 PPD5 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. DiT1 ATGSL12 SIG4 AT5G14970 AtENODL17 MEX1 BAM9 ADG2 CaS ATSS1 AT5G27560 AT5G28500 atylmg3 CRR7 DEG8 AT5G46420 ADG1 AT5G48590 ATGH9A1 ATPGMP AT5G53340 AtPLR1 THI1 AT5G55220 ATMAP65-1 GDPDL4 APO2 NPL1 NdhN AT5G58330 CLB4 COB ATGT18 DXR SHA1 CESA6 XTH6 ATPA PETB
GO:0044042 glucan metabolic process	BP	2.087e-57	AtFKGP ATCSLD5 AtBE2 POR ATHM1 AT1G04040 ATCTL1 ATGSL07 AT1G07280 AT1G07440 iPGAM1 ACLA-1 ATPMEPCRA ATSS3 ATNRT1 AT1G12500 AT1G12800 NDF6 AT1G22630 FB Cpn60beta4 AT1G30690 IMPL1 AK-HSDH FEI1 CYP97A3 GBSS1 AtcFBP CP22 AtPMEAMT AT1G49380 ABCD2 ATCSLE1 AT1G56190 AT1G56500 ATSCO1 AT1G62780 AT1G65230 AtIDD14 AT1G68600 AXY4 PG2 PGM2 AT1G73600 AT1G73655 ATKAS2 AtGH9B7 AMY2 sks5 AT1G76450 AT1G77090 ATGSTU20 APG2 AT2G03420 AT2G04700 EXGT-A1 ATCLASP ALF1 AtFBA1 AT2G21380 CSI1 AT2G22230 AT2G23390 AT2G25800 KCS11 AT2G26730 AGO4 PY ATFC-II AT2G31040 ATGSL03 BAM6 FEI2 AT2G35880 NHL12 AT2G36145 AT2G37660 CYT1 ATISA1 NTRC Encodes a defensin-like (DEFL) family protein. PHR2 PnsL3 AT3G01810 ATRGP1 ATF1 AT3G02750 ATGSTF11 AtUGP1 AT3G05900 ATCSLC06 AT3G08600 AT3G09050 CRM3 LSF2 PGK1 ESM1 ATGSL04 ATHM4 AT3G15570 MFP1 NDF4 EMB2083 EMB1270 AT3G18500 ACT2 AT3G19000 CBB1 PKP-ALPHA HCF101 AT3G29185 AT3G48200 AT3G48420 AT3G51510 FTSZ2-2 HCEF1 PDE329 SBPASE AT3G56010 AT3G56370 ATVLN3 AT3G59780 AT3G60750 OEP6 ATXT2 EMB3129 XTH9 AT4G04340 ATPC1 APX4 ATPD AT4G10300 SKU5 CYP83A1 AT-BETA-AMY AtBAM3 ATTPS5 ATSS4 AT4G20760 ATRP1 PGR5-LIKE ATCSLG3 ATCSLG1 PGI AtFBA5 GDPDL3 ATK2 AT4G30020 AHA2 PGR3 AT4G32330 AtCESA1 AtGLDP1 ATHDA14 AT4G33500 SLP2 CAT2 AT4G36180 AT4G36530 ACD2 XTH7 AtFBA2 APL3 ATCESA2 ATPDX1 AT5G01590 AT5G02940 SBE2.2 ATLDA ATCESA3 TBR CESA5 PPD5 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. DiT1 ATGSL12 SIG4 AT5G14970 AtENODL17 MEX1 BAM9 ADG2 CaS ATSS1 AT5G27560 AT5G28500 atylmg3 CRR7 DEG8 AT5G46420 ADG1 AT5G48590 ATGH9A1 ATPGMP AT5G53340 AtPLR1 THI1 AT5G55220 ATMAP65-1 GDPDL4 APO2 NPL1 NdhN AT5G58330 CLB4 COB ATGT18 DXR SHA1 CESA6 XTH6 ATPA PETB
GO:0005976 polysaccharide metabolic process	BP	5.841e-57	AtFKGP ATGPAT4 ATCSLD5 AtBE2 POR ATHM1 AT1G04040 AT1G04430 AT1G04680 ATCTL1 ATGSL07 AT1G07280 AT1G07440 AT1G09440 iPGAM1 ACLA-1 ATPMEPCRA ATSS3 ELP ATNRT1 AT1G12500 AT1G12800 NDF6 ARAC4 DRT112 AT1G22630 FB Cpn60beta4 AT1G30690 IMPL1 AK-HSDH FEI1 CYP97A3 GBSS1 AtcFBP CP22 AtPMEAMT AT1G49380 ATMUM4 ABCD2 AT1G54790 ATCSLE1 AT1G56190 AT1G56500 SQE1 ATSCO1 AT1G62780 NRS/ER AT1G65230 AtIDD14 CER6 AT1G68600 AXY4 PG2 AT1G70550 PGM2 AT1G72230 AT1G73600 AT1G73655 ATKAS2 UMAMIT5 AtGH9B7 AMY2 sks5 AT1G76450 AT1G77090 LAX3 ATGSTU20 ATRHM1 AtkdsA1 APG2 AT2G03420 AT2G04700 EXGT-A1 ATCLASP ALF1 AtFBA1 AT2G21380 CSI1 AT2G22230 AT2G23390 AT2G25800 KCS11 AT2G26730 AGO4 PY ATFC-II AT2G31040 ATGSL03 BAM6 GALS1 FEI2 AT2G35880 NHL12 AT2G36145 AT2G37660 AtAUX1 CYT1 ATISA1 NTRC Encodes a defensin-like (DEFL) family protein. PHR2 PnsL3 AT3G01810 ATRGP1 ATF1 AT3G02750 ATGSTF11 AtUGP1 AT3G05900 ATCSLC06 AT3G08600 AT3G09050 CRM3 PAL4 LSF2 PGK1 ESM1 ATGSL04 ATRHM3 ATHM4 AT3G15570 MFP1 NDF4 EMB2083 AT3G16370 EMB1270 AT3G18500 ACT2 AT3G19000 CBB1 PKP-ALPHA AT3G23090 HCF101 GAUT8 AFH1 GAMMA-TIP2 ABCB19 AT3G29185 AT3G48200 AT3G48420 BAM2 AT3G51510 AT3G52500 FTSZ2-2 HCEF1 PMR6 PDE329 SBPASE AT3G56010 AT3G56370 AT3G57220 ATVLN3 AT3G59780 AT3G60750 GAUT1 OEP6 AT4G00560 QUA3 MGP4 ATXT2 EMB3129 AFB1 XTH9 AT4G04340 ATPC1 Encodes a putative glycosyl hydrolase family 10 protein (xylanase). APX4 ATPD AT4G10300 SKU5 CYP83A1 AT4G14360 AT-BETA-AMY ATOPT3 AtBAM3 ATTPS5 ATSS4 BAM3 AT4G20760 ATRP1 sks4 PGR5-LIKE ATCSLG3 ATCSLG1 PGI AtFBA5 GDPDL3 ATK2 AT4G27435 AT4G30020 AHA2 PGR3 AT4G32330 AtCESA1 AtGLDP1 ATHDA14 AT4G33500 ATCAP1 SLP2 CAT2 XCP1 AT4G36180 AT4G36530 ACD2 XTH7 ATROPGEF1 AtFBA2 APL3 ATCESA2 AT5G01090 ATPDX1 AT5G01590 AT5G02940 SBE2.2 ATLDA ATCESA3 TBR ATBX3 CESA5 PAS2 PPD5 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. TUB6 DiT1 ATGSL12 AT5G13140 IQD11 SIG4 AT5G14970 AtENODL17 GAUT14 LNG1 AtNIK1 BCCP AtMYB43 MEX1 BAM9 ADG2 CaS ATSS1 AT5G26330 AT5G27560 AT5G28500 CAC2 atylmg3 CRR7 DEG8 BAM8 AT5G46420 ADG1 AT5G48590 ATGH9A1 ATPGMP AT5G53340 AtPLR1 THI1 AT5G55220 ATMAP65-1 AtIAMT1 GDPDL4 ATKCO1 APO2 NPL1 NdhN AT5G58330 AT5G58520 AT5G58540 CLB4 COB ATGT18 DXR SHA1 JK218 CESA6 BAM1 XTH6 CGR3 IRX15-L ATPA PETB
GO:0046483 heterocycle metabolic process	BP	7.815e-57	LHY KCS1 AtFKGP encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT1G01320 ASG4 GAE2 AT1G02110 AT1G02150 AtSAM1 ATCSLD5 AtD27 FZL PSB27 POR ATHM1 IAA3 AXR3 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase LIP2 ATGTF2H2 AT1G05150 emb2394 LPA19 BT3 ATCTL1 ATMYB13 RHON1 HPD OE23 SR45a ATPCNA1 AT1G07440 GATA11 AXS2 PSAO ALB-1V ABC1 AVDE1 AtMYB60 CRB AT1G10120 ATGSTU18 ACLA-1 EMB3103 ATFD1 CBRLK1 CLPP6 ATSRS AT1G12244 PHR1 AT1G12800 AFB3 ICE2 GAPA-2 AT1G13730 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. PnsL2 AT1G14345 AtMYB124 AT1G14460 AT1G14600 CYCA2;3 FDM1 AT1G15920 NDF1 ADAP AT1G16080 ATMYB58 AT1G16680 FUG1 GLYR2 AT1G18060 BEE1 AT1G18440 AT1G18485 ATSOT17 AtMYB47 NDF6 LHCA2*1 BES1 AT1G19490 ATCLH1 BEL10 ARF5 ATLFNR2 CVP1 DRT112 AT1G21060 ATNADK2 AGL87 AT1G22630 FB AT1G22910 ATCAF2 AOR MLP423 UGT74B1 ASB1 BBX15 ATSOFL1 Cpn60beta4 AT1G26790 AtHB23 SPL11 AT1G27480 SRD2 AT1G29950 PDH-E1 ARF6 GlcNAc1pUT1 AT1G31710 CYP97A3 AT1G31920 PRK ATNSI ACT1 KAN2 AT1G32470 PRPL11 AT-GTL1 AT1G33470 AT1G33600 AT1G35560 RPL21C AT1G36280 PMI1 GAPB CYCA1;1 CP22 ATMCM2 ABF2 Lhca5 DYW1 GATB AT1G49010 AT1G49380 FTSH1 AT1G50270 SCL-3 POLGAMMA2 GDC1 AT1G51080 AT1G51110 4CL.1 ADOF1 AT1G52220 PSAH-2 ATFPG-1 AT1G52510 SPA4 FTM6 TCP3 ATMUM4 AT1G54500 AtTLP18.3 AtIDD7 NDF5 PSAG HAC04 AT1G56050 ATDI19 ATNAS4 AT1G56500 ATATP-PRT1 AtHEMA1 SQE1 CRR28 ARF1 AT1G60590 ABC4 ATB2 ATRECQ4B AT1G62250 ACO2 FMO AT1G62660 ATSCO1 AT1G62780 NRS/ER NRPD1 AT1G63640 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AT1G64680 NDF2 RPOD1 G-TMT AT1G65070 AT1G65230 ATPAO4 cICDH ZFP4 AtMYB20 EMB2814 AT1G67700 PSBY CSK ATHPR1 AtIDD14 CER6 AT1G68810 ATSOFL2 BIM2 FLN2 AGO7 AtTCP15 HEMB1 CMT3 AT1G70000 SNL4 EMB25 AT1G70200 ATCYCD1;1 AT1G70280 ABCB26 MMZ2 CRR23 AT1G70770 AT1G71480 AT1G72270 AT1G72500 ATPIN1 AtEIL3 BBX16 AT1G74070 ATSOT18 ATSOT16 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G74840 ATKAS2 emb2184 UMAMIT5 LQY1 AtVAB1 AT1G76110 AT1G76120 CYCB2;4 AT1G76350 AT1G76450 AtHMGR1 AT1G76570 AT1G76880 AT1G77090 AT1G77310 AT1G78010 RAP2.4 ATGSTU20 ATSHB ATRHM1 ATGGH2 AT1G78995 ECT8 APL AT1G80850 APG2 AT2G01210 MEE65 RPI2 RGA ARR14 AtIDD5 AT2G03390 AT2G03420 RNE EMB2761 AT2G05920 AtOPR3 AT2G07170 AT2G07689 AT2G13440 MCM9 AT2G14910 OTP51 MCM4 AT2G17972 ATBZIP2 SCY1 HY3 ATHMA4 ATGLK1 ALF1 LIP1 AtERF53 PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 ATRL2 AT2G21960 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. ATIPS2 AGL22 IAA8 SCPL8 DEAR3 AT2G23360 NAPRT2 YCF37 BLH4 AT2G24060 PRPL35 PDE319 ATRPA2 AT2G24580 ESE2 AT2G25830 OVA4 ATHSFA2 CYP711A1 AT2G26500 ATDUF3 HO2 ATCDPMEK AGO4 LHW AT2G27290 AT2G27680 AT2G28200 DRB2 RAP2.7 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 ALB3 ADCS AT2G29180 PY ATVLN1 PBCP AT2G30320 ATFC-II ATC4H PSBW CYP71A13 ATCOQ3 FTSH2 TCP10 ATERF15 BBX25 ATNTH1 AT2G31670 ATCOP1 ATSUVH2 AT2G33550 ATUBC24 ATHB-14 EDA3 GDCH AT2G35390 AT2G35410 SKL2 AT2G35640 ATERF38 AT2G35760 BLH1 ATE2FA AT2G36145 AT2G36200 AT2G36350 DML1 MAT3 ATSIG6 ATPAL1 UMAMIT13 AS1 AT2G37660 PDX1L4 ATPDX1.1 ATSCAR2 RDO2 PnsL1 LHCB4.3 AT2G40260 AT2G40400 HEME2 ATKT2 ETG1 CYP98A3 AT2G41130 ARR8 NTRC AGK1 AtSPL9 ATBZIP34 AT2G42510 AT2G43030 ATLEUD1 BIO2 AT2G43500 AT2G43560 FAB2 ACS1 AT2G43760 BGLU26 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT2G46250 SPA1 ARF11 AT2G46810 PSAP PIL1 SPL1 ATDUF5 ATMYB12 PHR2 ATCFM2 ATHB-1 ATCYP38 ATBCA1 ATRGP1 RAD23-3 ATF1 AT3G02820 ATGSTF11 PDE326 IAA16 EMB3119 AIF1 AT3G06410 GATA15 AT3G06980 AT3G07270 AT3G08030 LHCB4.2 AT3G09050 ATHY2 PTAC13 AT3G09580 CRM3 ADK1 GYRB1 SPD1 ABCI6 AT3G10840 DGD1 emb2738 AT3G12210 PGK1 AT3G13000 AT3G13040 ATSERAT2;2 AT3G13120 AT3G13180 AT3G13226 ATKRS-2 AT3G13510 AT3G13740 AT3G14067 FLU ESM1 ATPME3 AT3G14330 ATRHM3 AT3G14890 HEME1 IDM1 MEE35 PRPS20 SPL5 ATHM4 AT3G15520 AT3G15550 ADS3 MFP1 PSAH-1 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ABCG29 AT3G16350 ATEBP HCF107 ECT6 POK1 MAT4 ATCRSH HYH ATACP5 WOX1 NRPD2B EMB1865 AT3G18870 AtTic62 BCAT4 AT3G20230 POLGAMMA1 AT3G20680 PSBTN AtBBX32 GluTRBP 4CL5 4CL2 ADOF2 AT3G22150 AT3G22520 ATTSO1 ELIP APS1 ATCFM3A bHLH34 ATPHO1 AT3G23700 GAE6 ATTOPII HCF101 AT-HSFC1 PLSP1 ICK3 ATGHBDH AtCHUP1 LTA2 RPL15 ATPRX GAPA ATSNM1 CCB1 ATICE1 ATSKL1 DRB3 ATTSO2 LHCB2 AT3G28460 AT3G42660 CHR38 ATNIT1 JK224 AT3G45900 ATMYB48 PTAC16 DUT1 AT3G47070 PEX11B ATSMC2 PYE AT3G47650 AT3G47830 ATATM AT3G48200 AT3G48420 GSA2 AT3G49000 OBP1 ICK2 BEH1 OEC33 AtHB28 SRS1 GATA6 AT3G51140 GMD2 AT3G51280 ATSSL4 ATG4 AT3G51950 FTSZ2-2 KIPK CYP97C1 ATPAL2 AT3G53680 PYRR HCEF1 ATPTR1 AT3G54390 LHCA1 PPL1 OVA1 P5CS2 ATDFD SBPASE ESK1 AT3G56010 AT3G56290 AT3G56680 AT3G56870 ACSF AT3G57060 BPG2 PrfB3 AGL16 AT3G57800 SPL15 GIS ATWRKY69 AT3G59040 PIF5 GUN4 AT3G59780 Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. HAT3 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. MAP65-4 AT3G61080 HD-GL2-1 ARATH;BSAS3;1 ATX3 AT3G61870 CYP20-3 ATMYB11 APG3 ATIPT3 CSP41A OEP6 AtcpRRF OTP86 APG1 EMB3126 AT3G63510 ATCCD1 BRCA2(IV) UNE10 YAB3 ANTR2 FDM2 AT4G00560 AT4G00870 AT4G00895 MEE47 TROL GT72B1 AT4G01460 ABC1 HEMG1 AtSAM2 MCM7 AT-RSH1 AT4G02530 EOL1 PSAD-1 EMB3129 AtRBP-DR1 AFB1 PETC EMB2369 APR ATPC1 PDF2 AtMYB74 ATK5 ARGAH2 APX4 AT4G09040 ATPD ATDET1 LHCB5 AT4G11100 SPA2 AT4G11175 ATMPK5 AT4G11570 PSAL AT4G12830 EPFL9 CYP83A1 ATSAHH1 KINESIN-12A AT4G14330 bHLH104 NF-YB3 CIPK4 ELIP2 ATTCX2 AT4G15430 AtCLA1 AT4G16141 PHYD AT4G17560 LIL3:1 AT4G17810 MYC4 APRR2 PHYE DEG5 TCP2 CH-42 AT4G18740 AT4G18810 AT4G18820 CMT2 Encodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death. AK-HSDH AAH PTAC14 PyrD PSBQ ATM4 ATML1 AT4G21770 ATSMO1-2 PGR5-LIKE CRF2 AT4G24350 AGL24 TAR2 AT4G24750 ATRBP31 AT4G24790 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) AT4G25030 ACP4 CHLM OTP70 AT4G25280 AT4G25290 CGA1 AtFBA7 AtFBA5 AtWRKY20 MAP65-2 ATK2 AT4G27240 CIP7 NARA5 AT4G28080 AT4G28740 PSAE-1 AT4G28780 emb2726 IAA27 AT4G29100 AT4G29120 AT4G30180 AHA2 GAE1 SARK GGP1 FAD6 ACDO1 PGR3 PDE334 LUG ATSDX1 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. ATHB-8 ATH1 AtGLDP1 ATHDA14 AtHMAC6 AT4G33740 AT4G33760 CCoAOMT1 AT4G34090 SEP1 BLH6 SSR16 AT4G34730 ASE2 MRL1 AtMYB32 HCF244 AT4G35270 AT4G36180 GATA7 AT4G36390 BEE2 ATRL3 AtPLT6 BLH2 ACD2 CYP81F3 ANT pde191 AQI AtVAB2 ATMYB4 AtFBA2 AT4G39040 VHA-A3 SAMC1 AT4G39630 encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. AKN2 CYP79B2 AT5G01020 SQD2 ATPDX1 AIRP2 LHCB4.1 AT5G02160 ATMTRNASEII AT5G02370 AT5G02460 AT5G02710 ATRAB AtNCS1 SBE2.2 54CP GYRB2 ATPAL3 ATLDA BTR1 SIR ATOFP13 NOL ATNAS1 AT5G05180 AT5G05790 UGT76C2 2-Cys HAT14 AT5G07020 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ATMYB29 AT5G08050 TCP17 BIM1 FTRA2 AT5G08415 AT5G08430 PDE340 AT5G08650 AtSRT2 AtPPa6 PMDH2 AST68 AIL6 AT5G10605 AT5G10690 AT5G10960 AT5G10970 HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 TINY2 ATNADP-ME2 AT5G12970 ATGSL12 EMB3136 ABAR SVR3 SIG4 CCS52B EMB3137 AT5G14460 AT5G14500 AO AT5G14910 AT5G14970 AT5G15390 AtbZIP3 AtMYB43 EMB2247 ENH1 PSY MEX1 AT5G17660 anac088 ATSRA1 AT5G18550 ATOBGC PCB2 NSH3 ADG2 AT5G19290 ATMGD2 CRR42 ATCKX5 ATHMA8 anac089 IMS3 CaS HCF136 AT5G23280 HMGB6 AT5G23480 ATSIG5 PGL5 LSU2 CRY3 AT5G25590 PYR6 AT5G28300 AT5G28500 GME ARRPS1 AT5G35170 CAC2 ATGSL1 AHK2 AT5G35970 atylmg3 ATPRFB CAT3 AT5G37010 ARF8 ARLA1A AT5G38520 CRR7 UDG4 ORTH1 DRB5 ATUBC8 AT5G41760 AT5G42070 FTSH5 AOS AT5G43150 SPL2 TZP AT5G44020 ATGLK2 AT5G44520 MCM6 ATFKBP13 AT5G45720 CHL AtNUDT11 AtLARP6a AT5G46390 AT5G46420 bHLH071 PYL1 ATNIG1 AT5G46910 Encodes the mitochondrial ATP synthase subunit delta. AT5G47190 AT5G47390 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT5G47620 NF-YB2 FRA1 AMK2 AT5G48220 ADG1 AT5G48360 HINT3 ATCAP-C LPA66 HCT OVA2 DDM2 ATMYB111 ATPPOX AT5G50000 AT5G50110 OLD5 AT5G50370 AT5G51110 AT5G51140 LPA2 At-NEET ATPGMP AT5G52010 CRR1 SCL8 AT5G52660 AT5G52780 ATWRKY27 AT5G52960 AT5G52970 thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. AtPLR1 TAT7 ATOMT1 PTAC15 THI1 AT5G55220 CRR21 AT5G56840 AT5G56850 GATA21 NAP1;3 CIA2 AHA3 BIO1 ADCL APO2 NPL1 NdhN AT5G58330 DDB2 ATUXS3 AtVIP2 ARF4 ATPDX2 CLB4 ATMYB34 PNM1 PIF7 AtMYB28 AtTudor2 ARF1-BP CDF1 AHA11 DXR AT5G62840 BT1 ATNDPK2 AT5G63700 SHA1 ALX8 PSAN ATGCH EMB3144 AT5G65220 ATHB-5 KAC2 STR16 ATLFNR1 AT5G66470 AT5G66520 MSP-1 ENY AT5G66770 ICU2 TOE3 AT5G67200 PSBA MATK RPS12 PSBK PSBI ATPA ATPF ATPH ATPI RPS2 RPOC2 RPOC1 RPOB PSBD PSBC YCF9 PSAB PSAA YCF3 RPS4 NDHJ PSBG ATPE ATPB RBCL ACCD PSAI YCF4 YCF10 PETA PSBL PSBF PSBE ORF31 PETG PSAJ RPS18 RPL20 CLPP1 PSBB PSBT PSBN PSBH PETB PETD RPOA RPS11 RPL36 RPS8 RPL14 RPL16 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex RPL22 RPS19 NDHB.1 NDHF YCF5 NDHD NDHE NDHG NDHI NDHA RPS15 NDHB.2 RPL2.2 ATP6 NAD5