4.0:Analysis result:Information of module

    Top 100 most enriched GO terms

GOID/Term	Ontology	p-value	Genes
GO:0044711 single-organism biosynthetic process	BP	1.872e-124	AT1G01080 KCS1 ATGPAT4 CER1 ATGPAT2 GATL5 ATCSLD5 ATWEE1 AtD27 AtBE2 POR AT1G04040 KCS2 AT1G04420 LIP2 AT1G04680 emb2394 CCR2 AtSLP1 ATNDI1 EMB2784 ATPCNA1 AT1G07700 KCS3 ADT6 ABC1 AT1G09310 CRB AT1G09390 AT1G09440 similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase iPGAM1 AT1G10740 Z-ISO ATFD1 ATSS3 ADT1 ATGLX1 AT1G11860 ATSRS ATNRT1 AT1G12800 AT1G13650 AT1G13730 LSMT-L AT1G14270 AT1G14345 ATWHY1 ATGA3OX1 CYCA2;3 AT1G15710 CP24 NDF1 AT1G16080 CYP79F2 BUS1 UP6 SPS2 AtHBP1 FUG1 AT1G18060 AT1G18440 ATSOT17 NDF6 AT1G19140 LHCA2*1 JMT ATLFNR2 DRT112 AT1G20950 AT1G22630 AT1G22850 AT1G23410 AOR GATL8 Cpn60beta4 AT1G28395 AT1G28530 ARAB-1 AT1G29700 PSAK AAE14 UGT78D1 ATIMD3 IMPL1 AK-HSDH CYP97A3 AT-IE PRK ATPRR1 ACT1 AT1G32470 ABCI7 FdC2 GBSS1 PRPL11 AT1G33110 AtGXMT1 RPL21C AT1G36280 GAPB Aty2 ATCAO CP22 ATMCM2 AT1G44920 RACK1B AT1G49380 LACS2 AtCXE5 GDC1 bHLH115 AT1G51110 AT1G51340 4CL.1 PSAH-2 ABA2 mMDH1 ATMUM4 AT1G54220 ABCD2 AtTLP18.3 AT1G54790 AT1G55210 AT1G55260 AGP21 AT1G55360 ZKT CPN60B AT1G55960 AT1G56050 AT1G56190 ATNAS4 AT1G56500 AT1G57770 ATATP-PRT1 AT1G58170 AtHEMA1 ATXYN1 ZCF125 EMB3108 AT1G60000 DHNS ABC4 ARP2 ACO2 FMO FMO ATSCO1 AT1G62780 ISPF REB1 BDG1 NDF2 AMT1;2 AT1G64880 G-TMT 4CL3 AT1G65230 FMO AT1G65870 AT1G66130 AT1G66180 ATGSR2 AT1G66330 AT1G66430 pde194 PSBY AT1G68240 AT1G68260 CER6 PSRP3/1 AT1G68600 PHO1;H1 PHYLLO FLN2 GATL9 AT1G70280 PG2 AT1G70550 AOAT2 PGM2 ATPIN3 AT1G70985 ANAC030 AT1G72430 LPA3 AT1G73110 ATPIN1 AT1G73600 AT1G74070 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. emb2184 AtGH9B7 PETE1 AT1G76450 ACR3 AT1G77090 LACS9 AT1G77670 ATGSTU20 SPS1 AT1G79150 CS17 AT1G80030 NIP6 APG2 ATPIN4 LCR68 ATMEPCT AIR3 FLA7 AT2G05920 AKN1 AT2G15020 ATHNIR KCS9 AT2G17630 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 AT2G21385 AT2G21530 ATRNR1 AT2G21860 ATIPS2 CYP79B3 NAPRT2 ATMES3 YCF37 eIFiso4G2 AT2G24060 HHP3 ATWRKY60 AT2G25830 CYP711A1 FDH NPC2 BASS2 ATCDPMEK AGO4 AT2G27360 AT2G27680 ADT3 ARF10 PY ANTR1 AtFAD3 ATFC-II RPT2 AT2G30695 BBX25 AT2G31670 AT2G31790 BAM6 ATCSLB03 ATCSLB04 AT2G32640 ATCB5-B AT2G33180 DAL PRPL28 GALS1 AT2G34460 CYP710A2 HMR NF-YA4 EDA3 AT2G35260 GDCH AT2G35410 SKL2 AT2G35840 NHL12 AT2G36145 MAT3 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 ADK UMAMIT12 AT2G37500 AT2G37660 ATCAX1 PDX1L4 TBL34 GAUT7 PGP1 PnsL1 RCA AT2G40400 HEME2 ETG1 GLY1 SSL2 NTRC AT2G42130 AT2G42220 ATPPC2 NPG1 ATLEUD1 AT2G43560 FAB2 AT2G44040 CHL-CPN10 AT2G44920 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 KPHMT1 ATCB5-C AtCCA1 PHR2 AT3G01060 AtCGS1 AtSS2 PnsL3 ATCYP38 ATBCA1 LSF1 ATPPT2 AT3G01660 AK3 EMB2768 ATF1 VTC4 ATGSTF11 AtUGP1 RGL2 AT3G03770 ATMS2 EMB3119 AT3G04840 RPL18 ATSFR2 TRX AT3G07270 ATYLMG1-1 AT3G07670 ATERDJ3A AT3G09050 PTAC13 ADK1 OMR1 PAL4 AT3G10610 GYRA LSF2 AtFAD7 ATBSMT1 CYC2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST ACT11 AT3G12320 PGK1 AT3G12930 AT3G13120 ESM1 AT3G14390 HEME1 PRPS20 AT3G15460 AT3G15520 ADS3 MFP1 NDF4 EMB2083 AT3G16370 HCF107 ECT6 MAT4 DAC EMB1270 RACK1C EMB1865 AT3G19030 ATCAD4 AT3G19480 BCAT4 ATPURC GluTRBP 4CL2 GLTP3 UGT84A2 ABCI12 AT3G22210 ELIP AT3G23090 bHLH34 AT3G23510 AT3G23530 ATSAHH2 AT3G23940 HCF101 PLSP1 AFH1 ATL5 AAPT2 AT3G25660 AT3G25805 ATPRX AT3G26450 ORF02 GAPA CCB1 ATTSO2 AT3G27200 DEG1 UMAMIT47 AT3G28760 ATCM1 AAO2 ATHD2A RPL9 PTAC16 AT3G47650 AT3G48200 AT3G48420 AT3G48460 GSA2 BAM2 ICK2 AT3G50685 OEC33 AT3G51140 ATG4 PSRP2 ATSPP2 CP33 FTSZ2-2 AT3G52900 ELL1 CYP97C1 ATPAL2 PYRR HCEF1 AT3G54210 AT3G54400 ATGRXCP PDE329 ATTSC13 ATDFD SBPASE AT3G56010 UGP3 AT3G56230 AT3G56290 AT3G56680 PSRP5 AT3G57010 NAGK ADSS AT3G58140 IPMI1 GUN4 ATRAD21.2 AT3G59780 AT3G59890 CDS5 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 CP12 APG3 CSP41A AtcpRRF APG1 EMB3126 BAM2 AT4G00895 TROL GT72B1 ATGPAT3 AT4G02530 EMB3129 AOP PETC APR ATPC1 ATMSRB5 CLS APX4 ATNDK1 ATPD ATSPS4F AT4G10300 NDPK3 BASS5 AT4G12600 CYP83A1 AT4G13840 ATSAHH1 The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. PDE226 AT4G14360 CYP97B3 CYP74B2 AtCLA1 SPK1 ATOPT3 AtBAM3 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 AT4G17560 LIL3:1 AT4G17740 MYC4 AT4G18440 CH-42 AK-HSDH PTAC14 AT4G20760 PyrD ATRP1 sks4 APT3 PGR5-LIKE CCS52A1 AESP AT4G23670 AtDIR6 ATCSLG3 TAR2 AT4G24750 ATRBP31 AT4G24830 AT4G24930 ACP4 CHLM SKS1 ATFIB2 B1 AT4G25870 AR192 VTC2 AT4G26860 FAD4 AtENODL2 AT4G27640 AT4G27700 PSB28 emb2726 AT4G30020 ATHMA2 AHA2 AT4G30470 FAD6 AT4G31310 PGR3 PDE334 ATBT1 ATSDX1 ATH1 ATCBL10 AtGLDP1 SQD1 AT4G33110 ATHDA14 AT4G33500 AtHMAC6 AGD2 AT4G34090 SEP1 EDA9 CLB6 ATCAP1 SQS2 ASE2 MRL1 HCF244 XCP1 ATSERAT3;2 MCA1 ROT3 AT4G36640 AtGGPPS11 MAP1D ATHMA1 LBD39 SQE3 XTH7 SHM1 ATMYB4 ROC1 AtFBA2 AT4G39040 APL3 ATCAD9 SAMC1 ATIPS1 AKN2 AT4G39970 LAC10 SQD2 AT5G01260 TBL3 ATPDX1 Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AtHsp70-2 AT-HSC70-1 AT5G02870 AT5G02940 LAC11 ADK2 AtNCS1 SBE2.2 54CP FD-GOGAT SIR ATNAS1 AtCHIL EMB2771 AtFAD8 ATEGY2 2-Cys AT5G07020 AT5G07090 ERL2 ATMYB29 AT5G08050 HEMC AGAL2 PDE340 ATFLS1 AT5G08650 AtPPa6 PMDH2 CESA5 ATMIPS3 AT5G10690 AT5G10920 APT5 PPD5 AtMYB3R4 ATTERC Encodes a protein with similarity to REN1, a Rho GTPase activating protein. DiT1 ATGSL12 ATCYP20-2 AT5G13140 EMB3136 ABAR ATCHS CARAB-AK-LYS ATIMD1 ATDEF2 AO AT-P5C1 AT5G15050 AtENODL17 GAUT14 AT5G15910 AtMYB43 UGT78D2 PSY AtUGP2 PCB2 BAM9 AGP25 ADG2 AT5G19240 AtHBP5 ATMGD2 ATCPN21 AT5G21060 AT5G21100 AT5G22340 IMS3 IMS2 CaS HCF136 ATSIG5 SQE5 AT5G24155 ATSS1 AT5G24760 AT5G26330 AT5G27390 MK AT5G27560 AT5G28500 ARRPS1 ATGSL1 G6PD1 atylmg3 AT5G38520 APE1 CRR7 OLI7 DEG8 UPM1 AT5G41760 NDH18 KCS20 ABCI21 AT5G44520 AT5G45280 ATFKBP13 CHL AT5G46580 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AMK2 ADG1 AT5G48740 ATPTS HCT OVA2 ATMYB111 AT5G50100 CP31B FSD2 AT5G51110 AT5G51310 ATTPPA ATPGMP B2 AT5G52970 AtPLR1 AT5G53920 ATOMT1 PTAC15 RPL24 ANK AT5G55220 ATFTSZ1-1 AT5G56040 LUT2 CER3 APO2 NPL1 NdhN AT5G58330 AtcPT4 AtRIBA3 ATLAC17 CLB4 ATMYB34 PDCB1 AtMYB28 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ATGT18 AHA11 DXR ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. GSA1 AT5G63700 ATGCH AT5G64850 ASN2 ANNAT2 BAM1 ATLFNR1 AT5G66470 ABA1 ICU2 EPS1
GO:0044281 small molecule metabolic process	BP	1.230e-121	AT1G01080 KCS1 ATGPAT4 AtBE2 POR KCS2 AT1G04420 LIP2 KAT1 ATPDI10 emb2394 LPA19 UGT1 AT1G06550 AtSLP1 ATNDI1 EMB2784 ATPCNA1 AT1G07700 KCS3 ADT6 ABC1 CJD1 AT1G09310 CRB AT1G09390 iPGAM1 ATGSTU18 AT1G10740 ATFD1 ADT1 ATGLX1 AT1G11860 ATSRS ATNRT1 AT1G12800 GAPA-2 AT1G13650 AT1G13730 LSMT-L PnsL2 AT1G14270 AT1G14345 AT1G15410 ATGA3OX1 AT1G15710 CP24 NDF1 AT1G16080 CYP79F2 BUS1 UP6 SPS2 AtHBP1 FUG1 GLYR2 AT1G18060 ATSOT17 NDF6 AT1G19140 LHCA2*1 JMT ATLFNR2 DRT112 AT1G20950 AT1G22630 AT1G22850 AT1G23410 AOR GATL8 G6PD3 Cpn60beta4 AT1G28395 AT1G28530 ARAB-1 AT1G29700 PSAK AAE14 GlcNAc1pUT1 ATIMD3 IMPL1 AK-HSDH CYP97A3 AT-IE PRK ACT1 AT1G32470 ABCI7 FdC2 GBSS1 PRPL11 AT1G33110 AT1G36280 SHM7 ATNR2 GAPB Aty2 ATCAO CP22 ATMCM2 AT1G44920 GATB RACK1B AT1G49380 LACS2 AtCXE5 FTSH1 ATHX GDC1 bHLH115 AT1G51110 AT1G51340 PSAH-2 ABA2 PLDALPHA2 mMDH1 ATMUM4 AT1G54220 ABCD2 AtTLP18.3 AT1G55260 AGP21 AT1G55360 ZKT AT1G55960 AT1G56190 ATNAS4 AT1G56500 ATATP-PRT1 EMB3108 AT1G60000 DHNS ABC4 ARP2 ACO2 FMO FMO ATSCO1 AT1G62780 ISPF BDG1 NDF2 AMT1;2 AT1G64880 G-TMT AT1G65230 FMO AT1G66130 AT1G66180 ATGSR2 AT1G66330 AT1G66430 pde194 GDPDL1 AT1G67690 PSBY AT1G68240 AT1G68260 CER6 PSRP3/1 PHYLLO FLN2 AT1G70280 ATBCA4 AOAT2 CRR23 AT1G70985 AtGDPD4 AP40 AT1G72430 EDA17 LPA3 ATPIN1 ENO1 AT1G74070 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. emb2184 AtGH9B7 LQY1 ATCDSP32 PETE1 AT1G76450 ACR3 AT1G77090 LACS9 AT1G77670 GNR1 ATGSTU20 SPS1 AT1G79150 NIP6 RPI2 LCR68 ATMEPCT AIR3 FLA7 EMB2761 AT2G05920 AKN1 AT2G15020 ATHNIR KCS9 AT2G17630 AAS A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI ATSULA BBX18 AtFBA1 AT2G21385 AT2G21530 ATRNR1 AT2G21860 AT2G21960 ATIPS2 CYP79B3 NAPRT2 ATMES7 ACL ATMES3 YCF37 AT2G24020 eIFiso4G2 AT2G24060 PRPL35 HHP3 AT2G24580 ATWRKY60 AT2G25530 AT2G25830 OVA4 PYL2 AtGLDP2 FDH BASS2 ATCDPMEK AT2G27360 AT2G27680 ADT3 ACA2 UXS6 PY ANTR1 AtFAD3 ATFC-II RPT2 AT2G30695 FIONA BBX25 AT2G31670 AT2G31790 CVL1 ATCB5-B ATPDI9 AT2G33180 PRPL28 AT2G34460 CYP710A2 NF-YA4 EDA3 AT2G35260 GDCH AT2G35410 SKL2 AT2G36145 DOGT1 MAT3 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 ADK UMAMIT12 AT2G37500 AT2G37660 ATCAX1 PGP1 PnsL1 RCA ATCAMBP25 SSL2 NTRC AT2G42130 AT2G42220 ATPPC2 NPG1 ATLEUD1 AT2G43560 FAB2 UGT74F1 ATHOL1 AT2G44040 CHL-CPN10 AT2G44920 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 KPHMT1 ATCB5-C PSAP AtCCA1 PHR2 AT3G01060 AtCGS1 AtSS2 ATCYP38 ATBCA1 AK3 EMB2768 ATF1 VTC4 ATGSTF11 RGL2 ATMS2 GDH3 EMB3119 AT3G04840 RPL18 ATSFR2 TRX AT3G07270 ATYLMG1-1 AT3G07670 ATERDJ3A PTAC13 IDH-VI ADK1 OMR1 PAL4 AT3G10610 GYRA AtFAD7 ATBSMT1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST AT3G12320 PGK1 AT3G12930 AT3G13120 ATKRS-2 ESM1 AT3G14390 HEME1 mMDH2 AT3G15460 AT3G15520 ADS3 MFP1 NDF4 AT3G16370 AAE7 RFC3 ECT6 MAT4 DAC RACK1C EMB1865 AT3G19030 AT3G19480 BCAT4 ATPURC AT3G22210 ATFAO3 ATSAHH2 AT3G23940 HCF101 PLSP1 ATL5 AT3G25805 ATPRX AT3G26450 GAPA CCB1 ATTSO2 DEG1 UMAMIT47 ATCM1 AAO2 LTPG2 AT3G44740 ATHD2A RPL9 PTAC16 DUT1 PEX11B AT3G47650 EDD AT3G48200 AT3G48420 AT3G48460 DCF GSA2 ATBCAT-3 AT3G50685 OEC33 AT3G51140 ATG4 PSRP2 CP33 ACA1 FTSZ2-2 ELL1 CYP97C1 ATPAL2 PYRR HCEF1 AT3G54210 AT3G54400 ATGRXCP PPL1 ATTSC13 OVA1 ATDFD SBPASE AT3G56010 AT3G56290 AT3G56300 AT3G57010 NAGK ADSS AT3G58140 IPMI1 GUN4 AT3G59780 AT3G59890 MTHFR1 AT3G60750 ATPIP1 ARATH;BSAS3;1 AT3G61870 CYP20-3 CSP41A AtcpRRF APG1 EMB3126 AT3G63510 ATT1 ANTR2 AT4G00895 TROL AT4G02530 EMB3129 AOP PETC EMB2369 APR ATPC1 ATMSRB5 ARGAH2 APX4 ATNDK1 ATPD AT4G10300 NDPK3 BASS5 AT4G12600 CYP83A1 AT4G13840 SHM4 ATSAHH1 ATECI3 CYP97B3 CYP74B2 IAGLU AtCLA1 SPK1 ATNS1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 AT4G17560 LIL3:1 AT4G18440 AT4G18460 CH-42 AK-HSDH ATRAB8D PyrD ATRP1 sks4 APT3 PGR5-LIKE AT4G23670 AtDIR6 AT4G24350 TAR2 AT4G24750 ATRBP31 AT4G24830 AT4G24930 ACP4 CHLM SKS1 ATFIB2 B1 AT4G25870 AtFBA7 AR192 VTC2 AT4G26860 FAD4 AtENODL2 AT4G27700 PSB28 AT4G28740 emb2726 AT4G30020 ATHMA2 AHA2 AT4G30620 FAD6 AT4G31310 PGR3 PDE334 ATBT1 ATSDX1 ATH1 AtGLDP1 SQD1 ATHDA14 AtHMAC6 AGD2 AT4G33760 AT4G34090 SEP1 EDA9 CLB6 SQS2 ASE2 MRL1 HCF244 ATSERAT3;2 MCA1 ROT3 AtGGPPS11 MAP1D ATHMA1 LBD39 SQE3 XTH7 SHM1 ROC1 AtFBA2 AT4G39040 ATIPS1 AKN2 AT4G39970 SQD2 AT5G01260 ATPDX1 AtHsp70-2 AT-HSC70-1 AT5G02870 ADK2 AtNCS1 SBE2.2 54CP FD-GOGAT ATPAL3 SIR ATNAS1 AtFAD8 ATEGY2 2-Cys AT5G07090 ERL2 ATMYB29 AtGDPD6 AT5G08050 HEMC PDE340 AT5G08650 AtPPa6 PMDH2 ATMIPS3 AT5G10690 AT5G10920 APT5 PPD5 DiT1 ATCYP20-2 AT5G13140 ATCHS CARAB-AK-LYS ATIMD1 ATDEF2 AO AT-P5C1 AtENODL17 AT5G15910 ATF2 EMB2247 ENH1 PSY AtUGP2 PCB2 AGP25 ADG2 AT5G19240 AT5G19760 ATMGD2 ATCPN21 AT5G21060 AT5G21100 AT5G22340 EMB1030 IMS3 IMS2 CaS HCF136 ATSIG5 SQE5 AT5G24155 PGL5 SHM2 AT5G27390 ARRPS1 AT5G35170 ATGSL1 G6PD1 atylmg3 AT5G38520 OLI7 DEG8 UPM1 AT5G41760 NDH18 KCS20 AT5G44520 AT5G45280 ATFKBP13 CHL AT5G45950 AT5G46580 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. LIL3:2 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AMK2 AT5G47970 ADG1 HINT3 ATPTS OVA2 MMT AT5G50100 CP31B AT5G51110 AT5G51310 At-NEET ATPGMP OVA6 B2 AT5G52780 AT5G52970 AtPLR1 AT5G53920 ATOMT1 RPL24 ANK AT5G55220 ATFTSZ1-1 GDPDL4 AT5G56040 CER3 APO2 NPL1 NdhN AT5G58330 AtcPT4 AtRIBA3 CLB4 ATMYB34 PDCB1 AtMYB28 AHA11 DXR ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. GSA1 AT5G63700 ATERS DCT ATGCH AT5G64850 ASN2 ANNAT2 ATLFNR1 AT5G66470 ABA1 EPS1
GO:0044710 single-organism metabolic process	BP	9.065e-114	AT1G01080 KCS1 CYP78A8 ATGPAT4 CER1 ATGPAT2 GATL5 ATCSLD5 ATWEE1 AtD27 AtBE2 POR ATBARD1 AT1G04040 SDG13 KCS2 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT1G04420 LIP2 AT1G04680 KAT1 ATPDI10 emb2394 LPA19 UGT1 ATNTH2 AT1G06250 AT1G06360 AT1G06550 AT1G06690 CCR2 AtSLP1 ATNDI1 EMB2784 ATPCNA1 AT1G07700 KCS3 ATLIG1 ADT6 AT1G08280 ABC1 CJD1 AT1G09310 CRB AT1G09390 AT1G09440 similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase iPGAM1 ATGSTU18 ATGSTU17 AT1G10740 Z-ISO AT1G10900 ATRECQ4A ATFD1 ATSS3 ADT1 ATGLX1 AT1G11860 ATSRS ATNRT1 FMO AT1G12244 PHR1 HPR3 AT1G12800 GAPA-2 CYP71B2 AT1G13650 AT1G13730 LSMT-L PnsL2 AT1G14270 AT1G14345 ATWHY1 AT1G15140 AT1G15410 ATGA3OX1 CYCA2;3 AT1G15710 CP24 AT1G15970 NDF1 AT1G16080 CYP79F2 BUS1 UP6 SPS2 AtHBP1 FUG1 GLYR2 AT1G18060 AT1G18090 ATNACK1 AT1G18440 ATSOT17 NDF6 AT1G19140 LHCA2*1 JMT ATCLH1 ATLFNR2 DRT112 AT1G20950 AT1G21350 ATOGG1 LYM1 ATPIP5K1 AT1G22630 AT1G22850 AT1G23410 AOR GATL8 G6PD3 Cpn60beta4 AT1G27120 AT1G27480 AT1G28395 AT1G28530 AT1G28570 AT1G28610 AT1G28660 ARAB-1 AT1G29660 AT1G29700 PSAK AAE14 UGT78D1 GlcNAc1pUT1 ATIMD3 IMPL1 AK-HSDH AT1G31690 CYP97A3 AT-IE PRK ATPRR1 ACT1 NRT1.5 AT1G32470 ABCI7 FdC2 AT1G32730 AT1G32780 GBSS1 PRPL11 AT1G33110 AtGXMT1 At-FANCM RPL21C AT1G36280 SHM7 ATNR2 SKS6 GAPB Aty2 ATCAO CP22 ATMCM2 AT1G44920 ATTLL1 mtLPD1 GATB RACK1B AT1G49380 LACS2 AtCXE5 AT1G49740 FTSH1 ATHX AT1G50450 GDC1 bHLH115 AT1G51110 AT1G51340 Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols. 4CL.1 PSAH-2 ABA2 PLDALPHA2 SPA4 mMDH1 ATMUM4 ATGSTU28 AT1G54220 ABCD2 AT1G54500 AtTLP18.3 AT1G54790 AT1G55210 AT1G55260 AGP21 AT1G55360 NDF5 AT1G55380 ZKT CPN60B AT1G55960 AT1G56050 AT1G56190 ATNAS4 AT1G56500 AT1G56670 AT1G57770 ATATP-PRT1 AT1G58170 AtHEMA1 ATXYN1 RXW8 ZCF125 EMB3108 AT1G60000 DHNS ABC4 ATFD2 ARP2 AT1G62030 APR2 AT1G62250 ACO2 FMO FMO ATSCO1 AT1G62780 AT1G63470 MDAR6 ISPF REB1 BDG1 NDF2 AMT1;2 AT1G64880 CYP89 G-TMT 4CL3 AT1G65070 AT1G65230 FMO AT1G65870 AT1G66130 AT1G66180 ATGSR2 AT1G66330 AT1G66430 pde194 AT1G66540 GDPDL1 RBCS1A AT1G67690 PSBY AT1G68240 AT1G68260 AT1G68440 BBX14 CER6 PSRP3/1 AT1G68600 PHO1;H1 STN7 PHYLLO FLN2 GATL9 AT1G70280 PG2 ATBCA4 AT1G70550 AOAT2 ABCB26 PGM2 CRR23 ATPIN3 AT1G70985 AtGDPD4 AtRLP11 AT1G71480 AT1G71500 ANAC030 AT1G72270 AERO1 AP40 AT1G72430 EDA17 LPA3 AT1G73110 ATPIN1 AT1G73600 AT1G73650 ENO1 AT1G74070 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NDH-O AT1G75090 emb2184 AtGH9B7 LQY1 ATCDSP32 PETE1 AMY2 AT1G76450 ACR3 AT1G77090 LACS9 AT1G77670 GNR1 ATGSTU23 ATGSTU20 SPS1 AT1G79150 AtOCT5 CS17 AT1G80030 NIP6 AT1G80850 APG2 AT2G01210 RPI2 ATPIN4 CRR3 AHK4 LCR68 ATMEPCT ATWHY3 AIR3 FLA7 EMB2761 PGR5 AT2G05920 MCM5 AT2G13440 AKN1 AT2G15020 ATHNIR KCS9 AT2G17630 AT2G19650 ATPRMT1A AAS A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 XK-1 AT2G21385 AT2G21530 ATRNR1 AT2G21830 AT2G21860 AT2G21960 ATIPS2 CYP79B3 AT2G22420 CLF NAPRT2 ATMES7 ACL ATMES3 YCF37 AT2G24020 eIFiso4G2 AT2G24060 PRPL35 HHP3 SDR2 AT2G24580 AtTic55 ATWRKY60 AtENODL14 AT2G25530 AT2G25830 OVA4 PYL2 AtGLDP2 CYP711A1 FDH NPC2 BASS2 ATCDPMEK AGO4 AT2G27360 AT2G27680 ADT3 ACA2 ARF10 AT2G28620 UXS6 PY ANTR1 AtFAD3 ATFC-II RPT2 AT2G30695 TCP10 FIONA ATCDT1A BBX25 AT2G31670 AT2G31790 CVL1 BAM6 ATCSLB03 ATCSLB04 AT2G32640 ATCB5-B ATPDI9 ATCOP1 AT2G33180 DAL PRPL28 BUBR1 GALS1 AT2G34060 AT2G34460 CYP710A2 HMR ABCC2 ATHB-14 NF-YA4 EDA3 AT2G35260 GDCH AT2G35410 SKL2 AT2G35760 AT2G35840 NHL12 AT2G36145 DOGT1 MAT3 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 ADK UMAMIT12 AT2G37500 AT2G37660 AKR4C9 ATCAX1 PDX1L4 TBL34 AT2G38380 GAUT7 PGP1 PnsL1 RCA AT2G40400 HEME2 ETG1 GLY1 ATCAMBP25 AT2G41050 SSL2 ARR8 NTRC AT2G42130 AT2G42220 ATPPC2 NPG1 ATLEUD1 AT2G43560 FAB2 UGT74F1 ATHOL1 AT2G44040 CHL-CPN10 AT2G44920 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 KPHMT1 SPA1 ATCB5-C PSAP AtCCA1 PHR2 AT3G01060 AtCGS1 AtSS2 PnsL3 ATCYP38 ATBCA1 LSF1 ATPPT2 AT3G01660 AK3 AT3G02640 EMB2768 ATF1 VTC4 ATGSTF11 AtUGP1 RGL2 NPC4 AT3G03770 ATMS2 GDH3 ATLTL1 SDG31 EMB3119 AT3G04840 AT3G05180 ATRAD9 RPL18 ATSFR2 TRX AT3G07270 ATYLMG1-1 AT3G07670 PIP5K6 ATERDJ3A AT3G09050 PTAC13 AT3G09580 LCL5 IDH-VI ADK1 OMR1 AT3G10310 PAL4 CYP77A6 AT3G10610 GYRA LSF2 AtFAD7 ATBSMT1 CYC2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST ACT11 AT3G12320 PGK1 AT3G12930 AT3G13120 ATKRS-2 AGP12 ESM1 AT3G14220 AT3G14390 CYP72A11 HEME1 mMDH2 AT3G15090 PRPS20 AT3G15460 AT3G15520 ADS3 MFP1 NDF4 EMB2083 AT3G16370 AAE7 HCF107 RFC3 ECT6 MAT4 DAC EMB1270 RACK1C EMB1865 ATUNG AT3G19030 ATPREP1 ATCAD4 AT3G19480 BCAT4 AT3G20010 CYP705A19 AT3G20150 AT3G20260 AT3G20790 ATPURC GluTRBP 4CL2 GLTP3 UGT84A2 ABCI12 AT3G22210 ATTSO1 ELIP AT3G23090 bHLH34 ATFAO3 AT3G23510 AT3G23530 MED33A ATSAHH2 ATTOPII AT3G23940 ATGR1 HCF101 PLSP1 AFH1 ATL5 AAPT2 AT3G25660 AT3G25805 ATPRX CYP86C2 CYP71B22 CYP71B35 CYP71B36 AT3G26450 ORF02 GAPA CCB1 DRB3 ATTSO2 AT3G27200 AT3G27510 AT3G27540 DEG1 UMAMIT47 AT3G28760 ATCM1 AAO2 LTPG2 ATGSTU27 AtKIN14h AT3G44740 ATHD2A RPL9 AT3G46490 PTAC16 DUT1 PEX11B AT3G47650 AT3G47830 EDD AT3G48200 CYP71A25 CYP71A24 CYP71A21 AT3G48420 AT3G48425 AT3G48460 DCF GSA2 AT3G49220 DMS3 AT3G49640 BAM2 ATBCAT-3 ICK2 AT3G50685 OEC33 AT3G51140 AT3G51280 ATG4 PSRP2 ATSPP2 CP33 ACA1 FTSZ2-2 AT3G52900 ELL1 CYP97C1 ATPAL2 ATGCP4 PYRR HCEF1 AT3G54210 AT3G54400 ATGR2 AT3G54750 ATGRXCP GSTL2 PDE329 PPL1 ATTSC13 OVA1 ATDFD SBPASE AT3G56010 UGP3 AT3G56230 AT3G56290 AT3G56300 AT3G56680 PSRP5 AT3G57010 PrfB3 NAGK ADSS AT3G58140 IPMI1 GUN4 ATRAD21.2 AT3G59780 AT3G59890 MTHFR1 CDS5 AT3G60750 AT3G61080 SDR1 ATPIP1 ARATH;BSAS3;1 AT3G61870 CYP20-3 CP12 APG3 ATIPT3 CSP41A AtcpRRF PLA APG1 EMB3126 AT3G63510 AT3G66652 BRCA2(IV) ATT1 ANTR2 BAM2 AT4G00895 TROL GT72B1 HEMG1 ATGPAT3 MCM7 AT4G02530 EMB3129 AOP PETC FIB EMB2369 APR ATPC1 ATMSRB5 ATMSRB6 CLS SAPX ARGAH2 APX4 ATNDK1 ATPD ATSPS4F AT4G10300 NDPK3 AT4G11290 BASS5 CYP706A6 AT4G12600 AT4G13550 CYP83A1 AT4G13840 SHM4 ATSAHH1 The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. AtPRD1 AT4G14200 PDE226 AT4G14360 ATECI3 AO1 CYP97B3 CYP74B2 IAGLU AtCLA1 AT4G16155 SPK1 ATOPT3 AtBAM3 ATNS1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 AT4G17560 LIL3:1 AT4G17740 MYC4 AT4G18440 AT4G18460 CH-42 AT4G18970 AT4G19380 AK-HSDH PTAC14 ATRAB8D AT4G20760 AT4G20840 PyrD ATRP1 APR3 sks4 APT3 PGR5-LIKE CCS52A1 AESP AT4G23670 AtDIR6 3xHMG-box2 ATCSLG3 AT4G24350 TAR2 AT4G24750 ATRBP31 AT4G24830 AT4G24930 ACP4 CHLM SKS1 AT4G25290 ATFIB2 B1 AT4G25830 AT4G25870 AtFBA7 AR192 VTC2 AT4G26860 FAD4 AtENODL2 AT4G27640 AT4G27700 CYP709B3 PSB28 AT4G28740 AT4G28780 emb2726 AT4G30020 ATHMA2 AHA2 AT4G30470 AT4G30620 AT4G30800 FAD6 AT4G31310 ACDO1 PGR3 ATGPX7 PDE334 ATBT1 ATSDX1 ATH1 ATCBL10 AtGLDP1 SQD1 AT4G33110 AT4G33400 ATHDA14 AT4G33500 AtHMAC6 AGD2 AT4G33760 CER4 AT4G34090 SEP1 EDA9 ALDH3 CLB6 ATCAP1 SQS2 ASE2 MRL1 CAT2 HCF244 XCP1 ATSERAT3;2 MCA1 ALDH3F1 BGAL3 ROT3 AT4G36640 AtGGPPS11 MAP1D ATHMA1 CYP81D5 LBD39 SQE3 XTH7 NDH-M SHM1 sks9 ATMYB4 ROC1 AtFBA2 AT4G39040 APL3 ATCAD9 SAMC1 CYP96A12 AT4G39630 ATIPS1 AKN2 AT4G39970 LAC8 LAC10 SQD2 AT5G01260 TBL3 ATPDX1 Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ABCI20 AtHsp70-2 AT-HSC70-1 AT5G02870 AT5G02940 LAC11 ADK2 AtNCS1 SBE2.2 54CP FD-GOGAT ATPAL3 SIR ATNAS1 AtCHIL EMB2771 AtFAD8 ATEGY2 UGT76C2 2-Cys AT5G07020 AT5G07090 ERL2 ATMSRA2 SMC6A ATMYB29 AT5G07800 ATRPA70B AtGDPD6 AT5G08050 HEMC AGAL2 PDE340 ATFLS1 AT5G08650 NDC1 AtPPa6 PMDH2 CESA5 ATMIPS3 AT5G10690 AT5G10920 APT5 HY5 PPD5 AtMYB3R4 AT5G12110 ATTERC Encodes a protein with similarity to REN1, a Rho GTPase activating protein. DiT1 ATGSL12 ATCYP20-2 AT5G13140 EMB3136 ABAR ATCHS CARAB-AK-LYS ATIMD1 ATDEF2 AO AT-P5C1 AT5G15050 AtENODL17 GAUT14 ATCOL1 AT5G15910 ATF2 AtMYB43 DHAR3 EMB2247 AT5G17000 UGT78D2 AT5G17160 ENH1 PSY AtUGP2 AT5G17670 encodes an adenylyltransferase PCB2 BAM9 AGP25 ADG2 AT5G19240 AT5G19760 AtHBP5 ATMGD2 ATCPN21 AT5G21060 AT5G21100 ATCKX5 AT5G22340 EMB1030 IMS3 IMS2 CaS HCF136 FSD3 AT5G23480 ATSIG5 SQE5 AT5G24155 ATSS1 PGL5 AT5G24760 CRY3 CYP71B12 AT5G25590 AT5G26330 SHM2 AT5G27390 MK AT5G27560 AT5G28500 ARRPS1 AT5G35170 ATGSL1 G6PD1 AT5G35970 atylmg3 ASF1B RBCS3B RBCS2B RBCS1B AT5G38520 APE1 CRR7 OLI7 DEG8 AT5G40150 UPM1 DRB5 AT5G41760 CYCA3;1 AT5G43150 TZP NDH18 KCS20 SDG18 ABCI21 AT5G44390 AT5G44400 AT5G44410 AT5G44520 AT5G44680 AT5G45280 ATFKBP13 CHL AT5G45950 AT5G45960 AT5G46220 MCM3 AT5G46580 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. LIL3:2 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AMK2 AT5G47970 ADG1 HINT3 AT5G48740 ATPTS HCT ATPRMT4A OVA2 ATMYB111 ATFRO6 ATFRO7 MMT AT5G50100 CP31B ATRBOHC FSD2 AT5G51110 AT5G51310 ATTPPA At-NEET ATPGMP encodes peroxidase involved in the lignification of tracheary elements (TE) in roots CYP96A4 OVA6 B2 AT5G52780 AT5G52950 AT5G52970 AtPLR1 AT5G53920 ATOMT1 PTAC15 AHL RPL24 ANK AT5G55220 ATFTSZ1-1 GDPDL4 AT5G55520 AT5G56040 AtGulLO4 LUT2 CER3 APO2 NPL1 NdhN AT5G58330 AT5G58390 DDB2 AtcPT4 AT5G59600 AtRIBA3 ULI3 ATLAC17 CLB4 ATMYB34 PDCB1 AtMYB28 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ATGT18 AHA11 DXR ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. ATRMI1 GSA1 AT5G63700 ATERS DCT ATGCH AT5G64850 ASN2 ANNAT2 BAM1 AT5G65840 ATLFNR1 AT5G66470 ATDDM1 ABA1 ICU2 EPS1 AT5G67200
GO:0044237 cellular metabolic process	BP	3.085e-106	LHY AT1G01080 KCS1 ASG4 ATGPAT4 CER1 ATGPAT2 ATCSLD5 LPA1 ATWEE1 AtD27 AtBE2 POR ATBARD1 AT1G04040 SDG13 KCS2 AXR3 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT1G04420 AT1G04480 PDLP2 BDL LIP2 KAT1 CTF18 ATPDI10 AT1G05140 emb2394 LPA19 UGT1 BT3 AT1G05870 ATNTH2 FTSH8 AT1G06550 CCR2 AtSLP1 ATNDI1 EMB2784 ATPCNA1 AT1G07700 KCS3 ATLIG1 ADT6 AT1G08280 ABC1 CJD1 ATPPCK1 emb2411 BIP3 AT1G09310 CRB AT1G09390 AT1G09440 similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase AT1G09590 AT1G09690 iPGAM1 ATGSTU18 ATGSTU17 AT1G10585 AT1G10740 Z-ISO AT1G10850 AT1G10900 ATRECQ4A ATFD1 SCM CRR22 AT1G11300 AT1G11410 ATPMEPCRA AT1G11670 ATSS3 ADT1 ATGLX1 AT1G11860 ATSRS ATNRT1 AT1G12244 SUMM2 PHR1 AT1G12460 AT1G12500 HPR3 AT1G12800 GAPA-2 AT1G13650 AT1G13730 LSMT-L PnsL2 AT1G14270 AT1G14345 AtMYB124 ATWHY1 AT1G14460 AT1G14600 AT1G15165 AT1G15410 ATECB2 ATGA3OX1 CYCA2;3 AT1G15710 CP24 AT1G15930 AT1G15970 NDF1 AT1G16080 CYP79F2 BUS1 HCF173 UP6 ACR11 SPS2 AtHBP1 FUG1 GLYR2 AT1G18060 AT1G18090 AT1G18170 ATNACK1 AT1G18440 AT1G18485 AT1G18540 ATSOT17 NDF6 AT1G19140 LHCA2*1 BES1 AT1G19490 JMT ATCLH1 AT1G19680 APS2 ATLFNR2 DRT112 AT1G20810 AT1G20950 ATOGG1 LYM1 ATPIP5K1 AGL87 AT1G22630 AT1G22850 AT1G23030 AT1G23410 AOR MLP423 G6PD3 AtPERK10 ATSOFL1 Cpn60beta4 AT1G26790 AT1G26880 AtHB23 ATHB54 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. AT1G27120 SPL11 AT1G27480 AT1G28395 AT1G28530 SRD2 ARAB-1 AT1G29700 AT1G29720 AB165 PSAK AAE14 GlcNAc1pUT1 ATIMD3 IMPL1 AK-HSDH CYP97A3 AT-IE AT1G31920 STRS1 PRK ATPRR1 AT1G32160 ACT1 AT1G32220 NRT1.5 AT1G32470 ABCI7 FdC2 AT1G32730 GBSS1 PRPL11 AT1G33110 AT1G33260 AtGXMT1 ATSERK2 At-FANCM AT1G35560 RPL21C AT1G36280 SHM7 AT1G36390 ATNR2 AT1G41880 GAPB Aty2 ATCAO CP22 ATMCM2 AT1G44920 Lhca5 CYCA3;2 DYW1 mtLPD1 CIPK17 EMB3105 RKL1 GATB RACK1B AT1G49010 AT1G49380 LACS2 AT1G49580 AT1G49975 FTSH1 POLGAMMA2 GDC1 bHLH115 AT1G51080 AT1G51110 AT1G51340 4CL.1 AT1G51805 AT1G52220 PSAH-2 AtPERK15 ABA2 AT1G52510 PLDALPHA2 SPA4 mMDH1 ATMUM4 ATGSTU28 PK3AT AT1G54050 AT1G54220 ABCD2 AT1G54500 AtTLP18.3 AT1G54790 AT1G54820 AT1G55140 AT1G55200 AT1G55210 AT1G55260 AAE18 AGP21 AT1G55360 NDF5 ZKT CPN60B AT1G55690 AT1G55960 HAC04 AT1G56050 AT1G56190 ATNAS4 AT1G56500 AT1G56720 AtMYB50 AT1G57660 AT1G57770 ATATP-PRT1 AT1G58170 AtHEMA1 ATXYN1 ZCF125 CRR28 CCB4 EMB3108 AT1G60000 DHNS AT1G60590 ABC4 ATFD2 AT1G61190 AT1G61300 ARP2 APR2 AT1G62250 ACO2 FMO FMO AT1G62630 BETA-VPE ATSCO1 AT1G62780 AT1G62950 AT1G63470 AT1G63610 MDAR6 ISPF REB1 AT1G64500 AT1G64510 BDG1 AT1G64680 NDF2 AMT1;2 RPOD1 AT1G64880 G-TMT 4CL3 AT1G65070 AT1G65190 AT1G65230 FMO AT1G65870 AT1G66130 AT1G66180 ATGSR2 AtMYB20 AT1G66330 AT1G66430 pde194 AT1G66930 GDPDL1 RBCS1A AT1G67690 PSBY CSK AT1G68240 AT1G68260 AT1G68400 AT1G68440 BBX14 CER6 PSRP3/1 AT1G68600 PHO1;H1 STN7 PHYLLO FLN2 AT1G69730 AT1G70000 AXY4 Encodes a Protease inhibitor/seed storage/LTP family protein AT1G70280 PG2 ATBCA4 AT1G70550 AOAT2 AT1G70600 ABCB26 PGM2 CRR23 AT1G70985 AtGDPD4 AtRLP11 AT1G71480 AT1G71810 ANAC030 AT1G72270 AP40 HAB1 EDA17 LPA3 AT1G73110 APC13 AT1G73390 ATPIN1 AT1G73600 ATMPK15 BBX16 ENO1 AT1G74070 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NDH-O RPS9 AT1G75090 AT1G75150 emb2184 AtGH9B7 LQY1 PETE1 AMY2 AT1G76450 ACR3 AT1G77090 TAPX LACS9 LYM3 AT1G77670 AT1G77750 GNR1 AT1G77940 AT1G78010 ATGSTU23 ATGSTU20 SPS1 AT1G78995 AT1G79150 AtOCT5 EMB1047 AT1G79630 CS17 AT1G80030 AT1G80640 NIP6 AT1G80850 AT1G80870 APG2 AT2G01210 RPI2 CRR3 AHK4 ATPAP8 LCR68 ATMEPCT ATWHY3 AT2G02780 ARPN OTP85 ATEXP15 AT2G03750 AtHsp90.5 AT2G04039 AIR3 FLA7 AT2G04790 EMB2761 LHCB2 PGR5 AT2G05920 MCM5 AT2G13440 AT2G14285 AKN1 AT2G15020 ATHNIR KCS9 BLH7 AT2G17630 AT2G17972 AtPPa2 AT2G18890 AT2G19400 ATPRMT1A rps15ab AAS AT2G20450 MEF21 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 AT2G21385 AT2G21530 ATRL2 ATRNR1 AT2G21960 SEP2 ATIPS2 CYP79B3 IAA8 CLF NAPRT2 ATMES7 ACL ATMES3 YCF37 AT2G23690 AT2G24020 eIFiso4G2 AT2G24060 PRPL35 PDE319 AT2G24170 AT2G24350 AT2G24580 ATWRKY60 AtENODL14 AT2G25220 AT2G25530 AtDBP1 ESE2 AT2G25830 OVA4 PYL2 AtGLDP2 CYP711A1 FDH ARSK1 AT2G26500 CYCB1;4 NPC2 BASS2 ATCDPMEK AGO4 AT2G27060 AT2G27360 AT2G27680 AT2G27710 ADT3 CH-CPN60A ACA2 ARF10 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 UXS6 AT2G29180 AT2G29360 PY ANTR1 AtFAD3 MAPKKK14 PBCP AT2G30320 ATFC-II TCL2 RPT2 AT2G30695 TCP10 FIONA ATERF15 ATCDT1A BBX25 AT2G31670 AT2G31790 MRL7-L CVL1 AT2G32060 ATOFP16 PRORP1 BAM6 ARASP ATCSLB03 ATCSLB04 AT2G32640 ATCB5-B ATSUMO5 ATPDI9 ATCOP1 AtPFA-DSP2 AT2G33180 DAL PRPL28 BUBR1 AT2G33735 AT2G34460 CYP710A2 HMR ABCC2 ATHB-14 NF-YA4 EDA3 AT2G35260 GDCH AT2G35410 SKL2 ATERF38 AT2G35760 AT2G35840 NHL12 AT2G36145 RPL24A AT2G36630 AtXTH32 MAT3 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 ADK ATRPS5B UMAMIT12 AT2G37500 AT2G37600 AS1 AT2G37660 AtHBP2 ATCAX1 PDX1L4 TBL34 GAUT7 AT2G38730 AT2G39240 SNZ PGP1 ATRPL23A PnsL1 AT2G39670 RCA LHCB4.3 AT2G40200 AT2G40400 HEME2 ETG1 ARR16 GLY1 ATCAMBP25 AT2G41050 SSL2 ARR8 AT2G41330 NTRC AT2G41890 AT2G42130 AT2G42220 ATPPC2 ATLEUD1 AT2G43560 FAB2 UGT74F1 ATHOL1 AT2G43945 AT2G44040 AT2G44230 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 KPHMT1 AT2G46250 SPA1 ATCB5-C PSAP AtCCA1 PHR2 RPH1 AT3G01060 AtENODL16 AtCGS1 AtSS2 PnsL3 ATCYP38 ATBCA1 LSF1 AT3G01660 AT3G01810 AK3 AT3G02640 EMB2768 ATF1 AT3G02820 PNT1 VTC4 ATGSTF11 AtUGP1 RGL2 NPC4 AT3G03770 ATMS2 GDH3 SDG31 EMB3119 AT3G04840 ATRAD9 AT3G05560 RPL18 ATSK12 ATSFR2 AT3G06680 TRX AT3G07110 AT3G07270 ATYLMG1-1 AT3G07670 PIP5K6 AT3G08600 AT3G08740 ATERDJ3A AT3G09050 AT3G09200 PTAC13 AT3G09580 LCL5 IDH-VI ADK1 OMR1 AT3G10060 GYRB1 AT3G10310 PAL4 AT3G10610 GYRA AT3G10760 AT3G10840 LSF2 AtFAD7 ATBSMT1 AT3G11510 CYC2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST AT3G11964 ACT11 AT3G12320 PGK1 AT3G12930 AT3G13000 AT3G13120 AT3G13180 Cpn60beta2 ATKRS-2 AT3G13510 AGP12 ESM1 AT3G14330 AT3G14390 GOX2 HEME1 mMDH2 PRPS20 SPA3 AT3G15460 AT3G15520 ADS3 MFP1 AT3G16080 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. EMB2083 AT3G16370 AAE7 HCF107 RFC3 ECT6 MAT4 CIPK1 HYH AT3G17830 RLK902 DAC WOX1 EMB1270 RACK1C EMB1865 ATUNG ATPUB29 ATWNK6 AtTic62 AT3G19030 AT3G19100 ATPREP1 AT3G19300 ATCAD4 AT3G19480 BCAT4 AT3G20010 AT3G20150 AT3G20200 AT3G20260 PSBTN ATPURC AtBBX32 GluTRBP 4CL2 GLTP3 UGT84A2 ABCI12 BBX31 AT3G22150 AT3G22210 ATWNK2 ATTSO1 ELIP ATSR2 AT3G23090 bHLH34 AT3G23390 MED33A XTH16 ATSAHH2 ATTOPII AT3G23930 AT3G23940 ATGR1 AT3G24190 HCF101 PLSP1 ATL5 AAPT2 AT3G25660 AT3G25805 CRF11 RPL15 ATPRX AT3G26450 ORF02 GAPA AT3G26700 CCB1 DRB3 ATTSO2 GHS1 AT3G27180 AT3G27200 AT3G27540 AT3G27640 EMB3123 RPL12 RPL12-C DEG1 AT3G28040 UMAMIT47 AT3G28760 ATCM1 CHR38 AAO2 LTPG2 ATGSTU27 anac061 AT3G44590 AT3G44620 AtKIN14h AT3G44740 ATHD2A RPL9 AtXTH31 AT3G45030 AT3G45430 ATMYB48 PTAC16 DUT1 AT3G47070 PEX11B AT3G47580 AT3G47650 AT3G47830 EDD AT3G48200 AT3G48420 AT3G48425 AT3G48440 AT3G48460 DCF GSA2 AT3G48830 ATBBC1 AT3G49220 DMS3 AT3G49640 BAM2 ATBCAT-3 AT3G49810 CRK ICK2 AT3G50685 OEC33 AT3G51140 AT3G51280 IMK2 ATG4 AT3G51950 PSRP2 ATSPP2 CP33 ACA1 FTSZ2-2 AT3G52900 ELL1 AT3G52960 CYP97C1 ATPAL2 AT3G53680 ATGCP4 PYRR HCEF1 AT3G54210 TBL36 AT3G54390 AT3G54400 ATGR2 AT3G54750 ATGRXCP GSTL2 PDE329 PPL1 ATTSC13 OVA1 ATDFD SBPASE AT3G56010 UGP3 AT3G56230 AT3G56290 AT3G56300 AT3G56370 PPD6 AT3G56680 PSRP5 BHLH038 BHLH039 AT3G57010 AT3G57020 AT3G57030 ARR9 BPG2 PrfB3 AT3G57400 NAGK ADSS GIS AT3G58140 IPMI1 GUN4 ATRAD21.2 AT3G59780 AT3G59890 MTHFR1 AT3G60245 CDS5 ATHAM2 AT3G60750 AT3G61080 ATPIP1 ARATH;BSAS3;1 AT3G61870 AT3G61950 CYP20-3 UBQ5 CP12 APG3 ATIPT3 CSP41A AtcpRRF OTP86 APG1 EMB3126 AT3G63510 Conceptual translation of this open reading frame gave the sequence of a 229-residue hypothetical protein that contains the same sequence as the mature A. thaliana chloroplast luminal 19-kDa protein linked to a putative signal sequence. AT3G66652 BRCA2(IV) UNE10 ATHAM3 AT4G00165 ATT1 ANTR2 BAM2 AHDP AT4G00810 AT4G00895 MEE47 AT4G00960 CRK41 TROL GT72B1 HEMG1 ATGPAT3 MCM7 AtGH9B13 AT4G02420 AT4G02530 AT4G02630 EMB3129 AOP AT4G03090 PETC FIB EMB2369 CRK40 APR ATPC1 ATMSRB5 ATKEA3 CLS ORL1 ARGAH2 APX4 ATNDK1 CRRJ ATPD ATSPS4F AT4G10300 AT4G10450 AT4G10600 NDPK3 AT4G11100 AT4G11120 AT4G11175 CRK30 BASS5 AT4G12600 AT4G12830 EPFL9 AT4G13170 CYP83A1 AT4G13840 SHM4 ATSAHH1 AtPRD1 AT4G14200 PDE226 AT4G14360 ATECI3 NF-YB3 AT4G15000 CYP97B3 AT4G15430 CYP74B2 PPD1 IAGLU AtCLA1 AT4G15640 AT4G16141 AT4G16155 SPK1 SVR7 AT4G16980 AtBAM3 ATNS1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 AT4G17560 LIL3:1 AT4G17740 MYC4 DEG5 AT4G18440 AT4G18460 CH-42 RPL16B AT4G18810 AG CMT2 PAM68 CYCT1;2 AK-HSDH AT4G19985 PTAC14 GSO1 ATRAB8D AT4G20760 GHR1 PyrD ATRP1 PSBQ AT4G21770 APR3 APT3 AT4G22730 AT4G22830 PGR5-LIKE CCS52A1 AESP CRK17 CRK21 AT4G23670 AtDIR6 AT4G23740 3xHMG-box2 ATCSLG3 AT4G24090 cpHsc70-1 AT4G24350 TAR2 AT4G24750 ATRBP31 AT4G24790 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) AT4G24830 AT4G24930 ACP4 CHLM SKS1 AT4G25290 ATFIB2 B1 AT4G25830 AT4G25870 AtFBA7 AT4G26660 AR192 VTC2 AT4G26860 FAD4 AtENODL2 AT4G27640 AT4G27700 EMB1923 MRL7 PSB28 AT4G28740 AT4G28780 emb2726 AT4G29520 AT4G30020 ATHMA2 AHA2 AT4G30330 AT4G30470 AT4G30620 AT4G30800 AT4G30825 FAD6 LRL2 AT4G31310 ACDO1 AtENODL15 PGR3 ATGPX7 PDE334 ATBT1 Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development. PERK14 ATSDX1 AT4G32915 ATH1 AtGLDP1 SQD1 AT4G33400 ATHDA14 AT4G33500 AtHMAC6 AT4G33560 AGD2 AT4G33760 AT4G34090 SEP1 EDA9 ALDH3 CLB6 AT4G34555 BLH6 SQS2 AT4G34730 ASE2 MRL1 CAT2 HCF244 AT4G35270 XCP1 ATSERAT3;2 MCA1 GATA7 ALDH3F1 BGAL3 ATRL3 AT4G36640 AtGGPPS11 MAP1D ATHMA1 SQE3 XTH7 SHM1 pde191 AT4G38520 ATMYB4 ROC1 BBX19 AtFBA2 AT4G39040 APL3 ATCAD9 SAMC1 AT4G39630 FKBP16-2 ATIPS1 AKN2 AT4G39960 AT4G39970 LAC8 LAC10 SQD2 AT5G01260 TBL3 ATPDX1 AT5G01590 ATCIPK14 ATOFP1 AT5G01890 STN8 OHP AtHsp70-2 AT-HSC70-1 AT5G02610 AT5G02760 LCL1 AT5G02870 AT5G02940 AT5G03140 LAC11 ADK2 AtNCS1 SBE2.2 PTL 54CP GYRB2 FD-GOGAT ATPAL3 SIR AT5G04840 ATNAS1 AtCHIL EMB2771 AtFAD8 ATEGY2 AT5G05790 UGT76C2 2-Cys AT5G06770 AT5G07020 AT5G07090 ERL2 ATMSRA2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. SMC6A ATMYB29 AT5G07800 ATRPA70B AtGDPD6 AT5G08050 HEMC AGAL2 AT5G08400 PDE340 AT5G08650 NDC1 AT5G09240 AtPPa6 PMDH2 AT5G09800 CESA5 AT5G10020 ATMIPS3 AT5G10605 AT5G10620 AT5G10690 AT5G10920 CIPK5 APT5 HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 TINY2 AT5G12110 ATTERC Encodes a protein with similarity to REN1, a Rho GTPase activating protein. DiT1 ATGSL12 ABAP1 ATCYP20-2 AT5G13140 EMB3136 ABAR SVR3 ATCHS CARAB-AK-LYS ATIMD1 AT5G14210 ATDEF2 AO AT-P5C1 AtENODL17 GAUT14 AtbZIP3 ATCOL1 AT5G15910 AT5G16130 AtMYB43 DHAR3 EMB2247 AT5G17160 ENH1 PSY RVE1 AtUGP2 AT5G17350 AT5G17660 AT5G17670 EMB1241 PSRP6 ATOBGC PCB2 BAM9 AGP25 EMB3013 ADG2 AT5G19240 ATOEP80 AT5G19760 AtHBP5 ATMGD2 ATBRXL4 ATGER3 ATCPN21 CRR42 AT5G21060 AT5G21100 AT5G21222 ATCKX5 AT5G22340 anac090 AT5G22440 EMB1030 IMS3 IMS2 CaS HCF136 FSD3 AT5G23480 ATSIG5 SQE5 ATSS1 PGL5 LSU2 AT5G24760 CRY3 ESE3 AT5G25590 tny AT5G26010 AT5G26330 SHM2 AT5G27240 AT5G27390 MK AT5G27560 AT5G28500 BIP1 ARRPS1 AT5G35170 AMOS1 ATGSL1 G6PD1 AT5G35970 atylmg3 ARF8 CIR1 CML24 AT5G37790 ASF1B RBCS3B AT5G38520 APE1 CRR7 CDF2 OLI7 DEG8 AT5G40060 CRK42 UPM1 RPL27 DRB5 RPS10B AT5G41760 BIP AT5G42070 ARC6 ATS CYCA3;1 AT5G43150 NF-YC13 TZP NDH18 KCS20 SDG18 AT5G44520 MCM6 AtCEST AT5G44680 AT5G45170 ATFKBP13 AT5G45720 AT5G45775 CHL AT5G45950 AT5G46220 MCM3 AT5G46390 BSK2 AT5G46580 bHLH071 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. LIL3:2 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT5G47620 NF-YB2 AMK2 AT5G47970 GFA2 ADG1 AT5G48360 HINT3 AT5G48740 AT5G48790 ATPTS LPA66 HCT ATPRMT4A OVA2 ATMYB111 ATFRO7 MMT cpHsc70-2 AT5G50100 AT5G50110 AtPIMT2 CP31B ATRBOHC FSD2 AT5G51110 AT5G51310 ATTPPA AT5G51560 At-NEET ATPGMP AT5G52010 OVA6 B2 AT5G52780 AT5G52950 AT5G52970 AT5G53070 TRY AtPLR1 AT5G53920 ATOMT1 PTAC15 THE1 AHL CRLK1 RPL24 ANK AT5G55220 ATFTSZ1-1 GDPDL4 AT5G55520 CRR21 AtHsp90.2 AT5G56040 AT5G56840 AT5G56850 AT5G56890 LUT2 AT5G57610 CER3 APO2 NPL1 NdhN AT5G58330 DDB2 AtcPT4 ftsh9 AT5G59250 AT5G59500 AT5G59600 AT5G59610 AT5G59740 AtRIBA3 AT5G59850 ATLAC17 AT5G60130 CLB4 AT5G60670 ATMYB34 ATRPA70D PDCB1 AT5G61170 AT5G61350 AtMYB28 AT5G61570 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ATCNX1 AGL42 ATGT18 ANAC101 CDF1 AHA11 DXR AT5G62840 ARR6 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. ATRMI1 GSA1 AT5G63700 ATERS DCT ATGCH EMB3144 AT5G64850 ASN2 ANNAT2 BAM1 XTH6 ATLFNR1 AT5G66230 AT5G66470 AT5G66520 ATDDM1 AT5G66770 ABA1 ICU2 EPS1 AT5G67200 RLK MATK
GO:0019682 glyceraldehyde-3-phosphate metabolic pro...	BP	4.871e-105	AT1G01080 POR AT1G04420 LIP2 emb2394 LPA19 EMB2784 ABC1 CRB ATGSTU18 ATFD1 AT1G12800 AT1G13650 LSMT-L PnsL2 AT1G14270 AT1G14345 NDF1 AT1G16080 FUG1 GLYR2 AT1G18060 NDF6 LHCA2*1 ATLFNR2 DRT112 AT1G22630 AOR G6PD3 Cpn60beta4 CYP97A3 PRK ACT1 AT1G32470 FdC2 PRPL11 GAPB AT1G44920 AT1G49380 FTSH1 GDC1 AT1G51110 AtTLP18.3 AT1G56500 ABC4 ATSCO1 AT1G62780 ISPF NDF2 AT1G65230 CER6 PSRP3/1 CRR23 AT1G74070 emb2184 LQY1 AT1G76450 AT1G77090 RPI2 ATMEPCT PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21530 AT2G21960 CYP79B3 YCF37 AT2G24060 PRPL35 ATCDPMEK AT2G27680 PY ATFC-II AT2G30695 AT2G33180 PRPL28 EDA3 GDCH AT2G35410 SKL2 AT2G36145 ATSIG6 AT2G37660 NTRC AT2G42130 AT2G43560 FAB2 AT2G44920 PSAP PHR2 ATCYP38 ATBCA1 ATF1 ATGSTF11 EMB3119 AT3G07670 PTAC13 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 AT3G15520 ADS3 MFP1 NDF4 DAC EMB1865 AT3G22210 HCF101 AT3G25805 CCB1 DEG1 RPL9 PTAC16 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 PSRP2 CP33 FTSZ2-2 CYP97C1 HCEF1 AT3G54210 PPL1 SBPASE AT3G56010 AT3G58140 GUN4 AT3G59780 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 CSP41A AtcpRRF APG1 EMB3126 ANTR2 TROL AT4G02530 EMB3129 PETC ATPC1 APX4 ATPD AT4G10300 CYP83A1 CYP97B3 AtCLA1 AT4G17560 LIL3:1 CH-42 PGR5-LIKE AT4G24750 ACP4 CHLM AtFBA7 AT4G27700 PSB28 AT4G28740 emb2726 FAD6 PGR3 PDE334 ATH1 AtGLDP1 ATHDA14 AT4G34090 SEP1 CLB6 MRL1 HCF244 AtFBA2 AT4G39040 SQD2 ATPDX1 SBE2.2 54CP ATEGY2 2-Cys AT5G08050 HEMC AT5G08650 PMDH2 AT5G10690 PPD5 ATDEF2 ENH1 PSY PCB2 ADG2 ATCPN21 CaS HCF136 PGL5 ARRPS1 ATGSL1 G6PD1 atylmg3 NDH18 AT5G44520 ATFKBP13 CHL Encodes the mitochondrial ATP synthase subunit delta. ADG1 CP31B AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 RPL24 AT5G55220 NdhN CLB4 DXR ATNDPK2 ATLFNR1 AT5G66470
GO:0044763 single-organism cellular process	BP	2.174e-101	AT1G01080 KCS1 ATRAB-A3 ATGPAT4 ATKEA1 CER1 ATGPAT2 ATCSLD5 LPA1 ATWEE1 AT1G03020 AtD27 AtBE2 POR ATBARD1 AT1G04040 SDG13 ATXIB KCS2 AXR3 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT1G04420 LIP2 AT1G04680 KAT1 CTF18 ATPDI10 emb2394 LPA19 UGT1 ATNTH2 AT1G06550 CCR2 AT1G06830 AtSLP1 ATNDI1 EMB2784 ATPCNA1 AT1G07700 KCS3 ATLIG1 ADT6 AT1G08280 ABC1 CJD1 BIP3 AT1G09310 CRB AT1G09390 AT1G09440 similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase iPGAM1 ATGSTU18 ATGSTU17 AT1G10740 Z-ISO AT1G10850 AT1G10900 ATRECQ4A ATFD1 SCM AT1G11300 AT1G11410 AT1G11670 ATSS3 ADT1 ATGLX1 AT1G11860 ATSRS ATNRT1 AT1G12244 PHR1 AT1G12460 AT1G12500 AT1G12800 GAPA-2 AT1G13650 AT1G13730 LSMT-L PnsL2 AT1G14270 AT1G14345 AtMYB124 ATWHY1 ATLPP2 AT1G15160 AT1G15410 ATGA3OX1 CYCA2;3 AT1G15710 CP24 ATNRAMP6 AT1G15970 NDF1 AT1G16080 CYCB3;1 ATOCT3 CYP79F2 BUS1 UP6 ACR11 SPS2 AtHBP1 FUG1 GLYR2 AT1G18060 AT1G18090 ATLP-1 ATNACK1 AT1G18440 ATSOT17 NDF6 AT1G19140 LHCA2*1 BES1 AT1G19450 JMT ATCLH1 APS2 AT1G19970 ATLFNR2 DRT112 AT1G20950 AT1G21350 ATOGG1 LYM1 ATPIP5K1 AT1G22630 AT1G22850 AST91 AT1G23410 AOR G6PD3 Cpn60beta4 AT-EXP10 AT1G27120 AT1G27480 ABCB13 AT1G28395 AT1G28530 SRD2 AT1G28570 ARAB-1 ATSCAR3 AT1G29700 PSAK AAE14 GlcNAc1pUT1 ATIMD3 IMPL1 AK-HSDH CYP97A3 AT-IE PRK AtLrgB ATPRR1 AT1G32160 ACT1 AT1G32220 NRT1.5 AT1G32470 ABCI7 FdC2 AT1G32730 GBSS1 PRPL11 AT1G33110 AtGXMT1 SAMC2 ATSERK2 At-FANCM RPL21C AT1G36280 SHM7 AT1G36390 ATNR2 GAPB Aty2 ATCAO CP22 ATMCM2 AT1G44920 Lhca5 AtRLP6 AT1G45688 CYCA3;2 AT1G47370 mtLPD1 CIPK17 EMB3105 RKL1 GATB RACK1B AT1G49380 LACS2 AT1G49740 FTSH1 ATHX GDC1 bHLH115 AT1G51110 AT1G51340 4CL.1 PSAH-2 AtPERK15 ABA2 PLDALPHA2 SPA4 mMDH1 TTL1 ATMUM4 ATGSTU28 AT1G54220 ABCD2 AT1G54500 AtTLP18.3 AT1G54790 AT1G55210 AT1G55260 AGP21 AT1G55360 NDF5 ZKT CPN60B ZIP11 AT1G55960 AT1G56050 AT1G56190 ATNAS4 AT1G56500 ADR2 SVB AtMYB50 AT1G57770 ATATP-PRT1 AT1G58170 AtHEMA1 ATXYN1 ZCF125 EMB3108 AT1G60000 DHNS ABC4 ATFD2 ARP2 APR2 AT1G62250 ACO2 FMO FMO ATSCO1 AT1G62780 AT1G62950 AT1G63470 MDAR6 ISPF AT1G64150 REB1 AT1G64500 AT1G64510 BDG1 NDF2 AMT1;2 AT1G64880 G-TMT CDI Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication). 4CL3 AT1G65070 AT1G65230 FMO AT1G65870 AT1G66130 ATGSR2 AT1G66330 AT1G66430 pde194 GDPDL1 AT1G67690 PSBY CSK AT1G68240 AT1G68260 AT1G68400 AT1G68440 BBX14 CER6 PSRP3/1 AT1G68600 PHO1;H1 AT1G68780 STN7 PHYLLO FLN2 AT1G69420 AT-EXP1 AT1G70280 PG2 ATBCA4 AT1G70550 AOAT2 ABCB26 PGM2 CRR23 CLE17 ATPIN3 AT1G70985 AtGDPD4 AtRLP11 AT1G71480 ANAC030 AT1G72270 AERO1 AP40 ATEXO70D1 ATGER1 EDA17 LPA3 AT1G73110 APC13 ATPIN1 AT1G73600 ATMPK15 AT1G73700 ENO1 AT1G74070 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G74730 AT1G75090 JAC1 RRA2 RRA1 AT1G75150 emb2184 AtGH9B7 LQY1 ATCDSP32 PETE1 AMY2 AT1G76450 AT1G76530 ACR3 AT1G77090 TAPX LACS9 AT1G77670 GNR1 AT1G78010 AUF1 AT1G78180 ATGSTU23 ATGSTU20 SPS1 AT1G78995 BRG2 AT1G79150 AtOCT5 CS17 AT1G80030 NIP6 AT1G80850 APG2 AT2G01210 RPI2 ATPIN4 CLE16 CRR3 AHK4 LCR68 ATMEPCT ATWHY3 AT2G02780 ARPN ATEXP15 AtHsp90.5 ZIP7 AIR3 AT2G04790 EMB2761 PGR5 AT2G05920 ABCC13 MCM5 AT2G13440 AKN1 AT2G15020 AtTic21 ATHNIR KCS9 AT2G17630 ARAC1 TXND9 AT2G19650 ATPRMT1A PLA2-BETA AT2G19780 ATXIG AAS A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. AT2G20710 ATEXPB1 PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 AT2G21340 AT2G21385 AT2G21530 ATRNR1 AT2G21830 AT2G21960 ATIPS2 CYP79B3 IAA8 CLF NAPRT2 ATMES7 ACL ATMES3 YCF37 AT2G24020 eIFiso4G2 AT2G24060 PRPL35 AT2G24580 ATWRKY60 AtENODL14 AT2G25270 AT2G25530 AT2G25830 OVA4 PYL2 AtGLDP2 CYP711A1 FDH ARSK1 CYCB1;4 SCAB1 NPC2 BASS2 ATCDPMEK AGO4 AT2G27060 AT2G27360 AT2G27680 ADT3 ACA2 ARF10 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 UXS6 ATEXP6 AT2G29180 PY ANTR1 AtFAD3 MAPKKK14 ATKT1 PBCP ATFC-II TCL2 RPT2 AT2G30540 AT2G30695 TCP10 FIONA ATERF15 ATCDT1A BBX25 AT2G31670 AT2G31790 ATCHX21 CVL1 PRORP1 BAM6 ATGLR3.7 ATCSLB03 ATCSLB04 AT2G32640 ATCB5-B ATPDI9 ATCOP1 AT2G33180 AT2G33255 DAL PRPL28 BUBR1 ATRANGAP2 AT2G34460 CYP710A2 HMR ABCC2 ATHB-14 NF-YA4 EDA3 CAT5 ATNPSN11 AT2G35260 GDCH AT2G35410 SKL2 AT2G35760 AT2G35840 NHL12 AT2G36145 MAT3 ABCB1 AT2G36970 ATSIG6 ATPAL1 RIP2 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 ADK UMAMIT12 AT2G37500 AS1 ATEXP3 AT2G37660 AtHBP2 ATCAX1 PDX1L4 PYL4 TBL34 PGP1 PnsL1 RCA AT2G40400 HEME2 ETG1 ATEXP8 ARR16 GLY1 ATCAMBP25 AT2G41050 AT2G41090 SSL2 ARR8 AT2G41330 NTRC AT2G41890 AT2G42130 AT2G42220 ATPPC2 ATLEUD1 AT2G43240 AT2G43560 FAB2 UGT74F1 ATHOL1 AT2G44040 CHL-CPN10 AT2G44920 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 AGP8 KPHMT1 ABIL1 SPA1 ATCNGC12 ATCB5-C PSAP AtCCA1 AtBOR1 ATNDT1 AT2G47500 PHR2 ABCC4 AT3G01060 AtCGS1 AtSS2 PnsL3 ATCYP38 ATBCA1 LSF1 AT3G01660 AK3 AT3G02640 EMB2768 ATF1 AT3G02820 VTC4 ATGSTF11 AtUGP1 RGL2 NPC4 AT3G03770 ATMS2 GDH3 AT3G04210 SDG31 EMB3119 AT3G04840 AtRLP31 AT3G05470 ATRAD9 RPL18 ATSFR2 TRX AT3G07270 ATYLMG1-1 AT3G07670 PIP5K6 AT3G08600 ATERDJ3A AT3G09050 PTAC13 ATEXO70H4 LCL5 IDH-VI ADK1 OMR1 AT3G10060 GYRB1 AT3G10310 PAL4 CAT7 AT3G10610 GYRA LSF2 AtFAD7 ATBSMT1 CYC2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST ACT11 AT3G12320 SULTR4;2 DRT100 PGK1 AT3G12930 AT3G13120 ATKRS-2 AT3G13510 AGP12 ESM1 AT3G14390 HEME1 mMDH2 PRPS20 AT3G15460 AT3G15520 ADS3 SULTR3;4 MFP1 NDF4 EMB2083 AT3G16370 AAE7 HCF107 RFC3 ECT6 MAT4 CIPK1 HYH AT3G17640 RLK902 DAC EMB1270 RACK1C AT3G18280 EMB1865 ATUNG BRU1 AT3G19030 ATPREP1 AT3G19370 ATCAD4 AT3G19480 BCAT4 AT3G20010 AT3G20150 AT3G20260 ATPURC AtBBX32 GluTRBP 4CL2 ABCC8 GLTP3 AT3G21460 UGT84A2 ABCI12 AT3G21690 AT3G22210 SOL1 ATTSO1 AT3G22810 ELIP ATSR2 AT3G23090 AtRLP37 MED33A RALFL24 ATSAHH2 ATTOPII AT3G23940 ATGR1 HCF101 PLSP1 CLE41 AT3G25410 AFH1 ATL5 AAPT2 AT3G25660 AT3G25805 CLE27 ATPRX CYP71B22 AT3G26450 ORF02 AT3G26590 GAPA CCB1 DRB3 ATTSO2 ATCLC-B AT3G27200 AT3G27540 DEG1 KLCR2 AT3G28040 UMAMIT47 ABCB15 AT3G28760 ATEXP5 ATCM1 CHR38 AAO2 AT3G43610 LTPG2 ATGSTU27 AtKIN14h AT3G44740 ATHD2A RPL9 FLA4 MAR1 PTAC16 COPT2 DUT1 AT3G47070 AtG3Pp1 PEX11B AT3G47580 AT3G47650 AT3G47830 EDD AT3G48200 AT3G48420 AT3G48425 AT3G48460 DCF GSA2 AtSWEET11 AT3G49220 DMS3 BAM2 ATBCAT-3 ICK2 AT3G50685 OEC33 AT3G51140 AT3G51280 TMT3 IMK2 ATG4 PSRP2 ATSPP2 CP33 ACA1 FTSZ2-2 AT3G52900 ELL1 CYP97C1 ATPAL2 MIDD1 ATGCP4 PYRR HCEF1 AT3G54210 AT3G54400 ATGR2 AT3G54750 ATGRXCP AT3G54930 GSTL2 PDE329 PPL1 ATTSC13 OVA1 AT3G55420 ATDFD SBPASE AT3G56010 UGP3 AT3G56160 AT3G56230 AT3G56290 AT3G56300 AT3G56370 PPD6 AT3G56680 PSRP5 BHLH038 BHLH039 ARR9 BPG2 PrfB3 NAGK ADSS GIS AT3G58140 IPMI1 ABCC10 GUN4 ATRAD21.2 AT3G59780 AT3G59890 MTHFR1 AT3G60070 CDS5 ATHAM2 AT3G60750 AT3G61080 ATPIP1 ARATH;BSAS3;1 AT3G61870 CYP20-3 APG3 ATIPT3 CSP41A AtcpRRF APG1 EMB3126 AT3G63510 AT3G66652 BRCA2(IV) ATHAM3 ATT1 ANTR2 PIP1;4 BAM2 AHDP AT4G00895 TROL GT72B1 ATGPAT3 MCM7 AT4G02530 EMB3129 AT4G02850 AOP PETC FIB EMB2369 APR ATPC1 AT4G04750 ATMSRB5 ATKEA3 CLS ARGAH2 APX4 ATNDK1 ATPD ATSPS4F AT4G10300 ATOPT7 NDPK3 AT4G11175 BASS5 AT4G12600 EPFL9 CYP83A1 AT4G13840 SHM4 ATSAHH1 AtPRD1 AT4G14200 PDE226 ACD6 ATECI3 CYP97B3 ABCG41 CYP74B2 IAGLU AtCLA1 AT4G15660 AT4G15670 AT4G15680 RALFL33 AT4G16155 SPK1 ATOPT3 AT-EXPR AtBAM3 ATNS1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 AT4G17560 LIL3:1 AT4G17740 AT4G18440 AT4G18460 CH-42 AtRLP51 AG CYCT1;2 AK-HSDH AT4G19985 PTAC14 GSO1 ATRAB8D AT4G20760 GHR1 PyrD ATRP1 AT4G21910 APR3 sks4 APT3 AT4G22730 PGR5-LIKE CCS52A1 AESP AT4G23670 AtDIR6 AT4G23740 3xHMG-box2 ARC1 ATCSLG3 AT4G24090 AT4G24170 AT4G24350 TAR2 AT4G24750 ATRBP31 AT4G24780 AT4G24830 AT4G24930 TPD1 ACP4 CHLM SKS1 AT4G25290 ATFIB2 B1 AT4G25830 ABCB2 AtFBA7 AT4G26660 AR192 VTC2 AT4G26860 FAD4 AT4G27360 AtENODL2 AT4G27700 ATEXPB3 PSB28 AMT1;4 GrxC5 AT4G28740 emb2726 ADS1 AT4G30020 ATHMA2 AHA2 AT4G30470 BRS1 AT4G30620 AT4G30800 scpl29 FAD6 LRL2 AT4G31310 ACDO1 AtENODL15 PGR3 ATGPX7 PDE334 ATBT1 ATSDX1 ATH1 ATCBL10 AtGLDP1 SQD1 AT4G33040 AT4G33400 ATHDA14 AT4G33500 AtHMAC6 AT4G33560 AGD2 AT4G33760 CER4 AT4G34090 SEP1 EDA9 ALDH3 CLB6 ATCAP1 AT4G34730 ASE2 MRL1 CAT2 HCF244 ATGLR3.2 XCP1 ATSERAT3;2 MCA1 ALDH3F1 BGAL3 ROT3 AT4G36640 AtGGPPS11 CBSX1 MAP1D ATHMA1 AT4G37295 SQE3 XTH7 SHM1 pde191 ATMYB4 ROC1 AT4G38950 AtFBA2 AT4G39040 APL3 ATCAD9 SAMC1 AT4G39630 ATIPS1 AKN2 AT4G39970 LAC8 LAC10 SQD2 AT5G01260 TBL3 ATPDX1 AT5G01590 ATRAPTOR1A ATCIPK14 ATOFP1 AT5G01890 AtHsp70-2 AT-HSC70-1 AT5G02870 AT5G02940 LAC11 ADK2 AtNCS1 SBE2.2 TRM28 ATCSLA09 54CP GYRB2 FD-GOGAT ATPAL3 SIR ATNAS1 EMB2771 AtFAD8 ATEGY2 2-Cys AT5G07020 AT5G07090 ERL2 APC3 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. SMC6A ATMYB29 AT5G07800 ATRPA70B AtGDPD6 AT5G08050 HEMC AGAL2 PDE340 AT5G08650 NDC1 AtPPa6 PMDH2 CESA5 AT5G10020 ATMIPS3 AtRABH1e KAC1 AT5G10690 AT5G10920 CIPK5 APT5 HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 NDL2 AT5G12110 ATTERC Encodes a protein with similarity to REN1, a Rho GTPase activating protein. DiT1 ATGSL12 ATCYP20-2 AT5G13140 EMB3136 ABAR ATCHS CARAB-AK-LYS ATIMD1 AT5G14210 ATDEF2 AO AT-P5C1 AT5G15050 GAUT14 AtbZIP3 ATCOL1 AT5G15910 ATF2 AtMYB43 DHAR3 EMB2247 AT5G17010 AT5G17160 ENH1 PSY RVE1 AtUGP2 AT5G17630 AT5G17670 AT5G17700 encodes an adenylyltransferase ATOBGC PCB2 BAM9 AGP25 EMB3013 ADG2 AT5G19240 SULTR3;5 AT5G19760 AT5G19970 AtHBP5 PHT4;5 ATMGD2 ATGER3 AT5G20700 ATCPN21 AT5G21060 AT5G21100 AT5G22340 emb1211 EMB1030 IMS3 IMS2 CaS HCF136 FSD3 AT5G23480 ARC11 ATSIG5 SQE5 ATSS1 PGL5 AT5G24760 CRY3 ESE3 AT5G25590 tny AT5G26010 AT5G26200 AT5G26330 SHM2 ATIREG3 AT5G27290 SFP2 AT5G27390 MK AT5G27560 AT5G28500 BIP1 AT5G28750 ARRPS1 AT5G35170 AMOS1 ATGSL1 G6PD1 AT5G35970 atylmg3 ASF1B AT5G38520 APE1 CRR7 OLI7 DEG8 EMB139 UPM1 DRB5 AT5G41760 BIP AT5G42070 ATBG_PPAP CYCA3;1 AT5G43150 TZP NDH18 KCS20 AT5G43870 SDG18 AT5G44050 TAO1 AT5G44520 AT5G44680 AT5G45060 AtPP2-A6 ATFKBP13 CHL AT5G45950 AT5G46220 AT5G46270 MCM3 AT5G46390 AT5G46450 BSK2 AT5G46580 TET1 PYL1 BOU Encodes the mitochondrial ATP synthase subunit delta. LIL3:2 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AMK2 AT5G47970 GFA2 ADG1 AT5G48360 HINT3 AT5G48740 ATPTS ATSDI1 LPA66 HCT ATPRMT4A OVA2 ATFRO7 MMT AT5G50100 CP31B AT5G50420 ATRBOHC FSD2 AT5G51110 AT5G51310 ATTPPA AT5G51560 At-NEET ATPGMP OVA6 B2 AT5G52780 AT5G52950 AT5G52970 TRY ATPMEPCRF AT5G53500 AtPLR1 ATMLO11 AT5G53900 AT5G53920 ATOMT1 PTAC15 THE1 AHL RPL24 ANK ATK3 AT5G55220 ATFTSZ1-1 GDPDL4 AT5G55520 CRR21 AtHsp90.2 AT5G56040 ATEXP14 PFN3 LUT2 AT5G57170 AT5G57345 CER3 APO2 NPL1 AT5G58160 NdhN AT5G58330 AT5G58480 DDB2 AtcPT4 AT5G59250 WOX2 AtZIP2 AT5G59600 AT5G59740 AtRIBA3 ULI3 ATLAC17 CLB4 ATMYB34 PDCB1 AtMYB28 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ATGT18 ANAC101 AHA11 DXR AT5G62840 AT5G62890 ARR6 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. ATFP3 ATRMI1 GSA1 AT5G63700 ATERS DiT2.2 DCT ATGCH AT5G64850 AT5G64970 ASN2 BAM1 ATLFNR1 AT5G66310 AT5G66470 AT5G66740 ATDDM1 ABA1 RALFL34 ICU2 EPS1 AT5G67200 RLK
GO:0006081 cellular aldehyde metabolic process	BP	3.343e-101	AT1G01080 CER1 POR AT1G04420 LIP2 emb2394 LPA19 EMB2784 ABC1 CRB ATGSTU18 ATFD1 ATGLX1 AT1G12800 AT1G13650 LSMT-L PnsL2 AT1G14270 AT1G14345 NDF1 AT1G16080 FUG1 GLYR2 AT1G18060 NDF6 LHCA2*1 ATLFNR2 DRT112 AT1G22630 AOR G6PD3 Cpn60beta4 IMPL1 CYP97A3 PRK ACT1 AT1G32470 FdC2 PRPL11 GAPB AT1G44920 AT1G49380 FTSH1 GDC1 AT1G51110 AtTLP18.3 AT1G56500 ABC4 ATSCO1 AT1G62780 ISPF NDF2 AT1G65230 AT1G67690 CER6 PSRP3/1 ATBCA4 CRR23 AT1G74070 emb2184 LQY1 AT1G76450 ACR3 AT1G77090 RPI2 ATMEPCT PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21530 AT2G21960 CYP79B3 YCF37 AT2G24020 AT2G24060 PRPL35 AT2G25530 ATCDPMEK AT2G27680 PY ATFC-II AT2G30695 AT2G33180 PRPL28 EDA3 GDCH AT2G35410 SKL2 AT2G36145 ATSIG6 AT2G37660 PDX1L4 PGP1 NTRC AT2G42130 AT2G43560 FAB2 AT2G44920 PSAP PHR2 ATCYP38 ATBCA1 ATF1 VTC4 ATGSTF11 EMB3119 AT3G07670 PTAC13 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 AT3G15520 ADS3 MFP1 NDF4 AAE7 RFC3 DAC EMB1865 AT3G22210 HCF101 AT3G25805 CCB1 DEG1 RPL9 PTAC16 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 PSRP2 CP33 FTSZ2-2 CYP97C1 HCEF1 AT3G54210 PPL1 SBPASE AT3G56010 AT3G58140 GUN4 AT3G59780 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 CSP41A AtcpRRF APG1 EMB3126 AT3G63510 ANTR2 TROL AT4G02530 EMB3129 PETC ATPC1 APX4 ATPD AT4G10300 CYP83A1 CYP97B3 AtCLA1 AT4G17560 LIL3:1 CH-42 PGR5-LIKE AT4G24750 ACP4 CHLM AtFBA7 AT4G27700 PSB28 AT4G28740 emb2726 AT4G30620 FAD6 PGR3 PDE334 ATH1 AtGLDP1 ATHDA14 AT4G34090 SEP1 ALDH3 CLB6 MRL1 HCF244 ALDH3F1 AtFBA2 AT4G39040 SQD2 ATPDX1 SBE2.2 54CP ATEGY2 2-Cys AT5G08050 HEMC AT5G08650 PMDH2 AT5G10690 PPD5 ATDEF2 ENH1 PSY PCB2 ADG2 ATCPN21 CaS HCF136 PGL5 ARRPS1 ATGSL1 G6PD1 atylmg3 NDH18 AT5G44520 ATFKBP13 CHL Encodes the mitochondrial ATP synthase subunit delta. AT5G47970 ADG1 CP31B AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 RPL24 AT5G55220 NdhN CLB4 DXR ATNDPK2 ATLFNR1 AT5G66470
GO:0009987 cellular process	BP	7.673e-101	LHY AT1G01080 KCS1 ATRAB-A3 ASG4 ATGPAT4 ATKEA1 CER1 ATGPAT2 ATCSLD5 LPA1 ATWEE1 AT1G03020 AtD27 AtBE2 POR ATBARD1 AT1G04040 SDG13 ATXIB KCS2 AXR3 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT1G04420 AT1G04480 PDLP2 BDL LIP2 AT1G04680 KAT1 CTF18 AT1G04770 ATPDI10 AT1G05140 emb2394 LPA19 UGT1 BT3 AT1G05870 ATNTH2 FTSH8 AT1G06550 CCR2 AT1G06830 AtSLP1 ATNDI1 EMB2784 ATPCNA1 AT1G07700 KCS3 ATLIG1 ADT6 AT1G08280 ABC1 CJD1 ATPPCK1 emb2411 BIP3 AT1G09310 CRB AT1G09390 AT1G09440 similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase AT1G09590 AT1G09690 iPGAM1 ATGSTU18 ATGSTU17 AT1G10585 AT1G10740 Z-ISO AT1G10850 AT1G10900 ATRECQ4A ATFD1 SCM CRR22 AT1G11300 AT1G11410 ATPMEPCRA AT1G11670 ATSS3 ADT1 ATGLX1 AT1G11860 ATSRS ATNRT1 AT1G12244 SUMM2 PHR1 AT1G12460 AT1G12500 HPR3 AT1G12800 GAPA-2 AT1G13650 AT1G13730 LSMT-L PnsL2 AT1G14270 AT1G14345 AtMYB124 ATWHY1 AT1G14460 AT1G14600 ATMAP70-4 ATLPP2 AT1G15160 AT1G15165 AT1G15410 ATECB2 ATGA3OX1 CYCA2;3 AT1G15710 CP24 AT1G15930 ATNRAMP6 AT1G15970 NDF1 AT1G16080 CYCB3;1 ATOCT3 CYP79F2 BUS1 HCF173 UP6 ACR11 SPS2 AtHBP1 FUG1 GLYR2 AT1G18060 AT1G18090 AT1G18170 ATLP-1 ATNACK1 AT1G18440 AT1G18485 AT1G18540 ATSOT17 NDF6 AT1G19140 LHCA2*1 BES1 AT1G19450 AT1G19490 JMT ATCLH1 AT1G19680 APS2 AT1G19970 ATLFNR2 DRT112 AT1G20810 AT1G20950 AT1G21140 AT1G21350 ATOGG1 LYM1 ATPIP5K1 AGL87 AT1G22630 AT1G22850 AT1G23030 AST91 AT1G23410 AOR MLP423 G6PD3 AtPERK10 ATSOFL1 Cpn60beta4 AT-EXP10 AT1G26790 AT1G26880 AtHB23 ATHB54 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. AT1G27120 SPL11 AT1G27480 ABCB13 AT1G28395 AT1G28530 SRD2 AT1G28570 ARAB-1 ATSCAR3 AT1G29700 AT1G29720 RWA4 AB165 PSAK AAE14 GlcNAc1pUT1 ATIMD3 IMPL1 AK-HSDH CYP97A3 AT-IE AT1G31920 STRS1 PRK AtLrgB ATPRR1 AT1G32160 ACT1 AT1G32220 NRT1.5 AT1G32470 ABCI7 FdC2 AT1G32730 GBSS1 PRPL11 AT1G33110 AT1G33260 AtGXMT1 SAMC2 ATSERK2 At-FANCM AT1G35560 RPL21C AT1G36280 SHM7 AT1G36390 ATNR2 SKS6 AT1G41880 GAPB Aty2 AT1G44000 ATCAO CP22 ATMCM2 AT1G44920 Lhca5 AtRLP6 AT1G45688 CYCA3;2 AT1G47370 DYW1 mtLPD1 CIPK17 EMB3105 RKL1 GATB RACK1B AT1G49010 AT1G49380 LACS2 AT1G49580 AtCXE5 AT1G49740 AT1G49975 FTSH1 ATHX POLGAMMA2 GDC1 HTA10 bHLH115 AT1G51080 AT1G51110 AT1G51340 4CL.1 AT1G51805 AT1G52220 PSAH-2 AtPERK15 ABA2 AT1G52510 PLDALPHA2 SPA4 mMDH1 TTL1 ATMUM4 ATGSTU28 PK3AT AT1G54050 AT1G54220 ABCD2 AT1G54500 AtTLP18.3 AT1G54790 AT1G54820 AT1G55140 AT1G55200 AT1G55210 AT1G55260 AAE18 AGP21 AT1G55360 NDF5 ZKT CPN60B AT1G55690 ZIP11 AT1G55960 HAC04 AT1G56050 AT1G56190 ATNAS4 AT1G56500 ADR2 SVB AT1G56720 AtMYB50 AT1G57660 AT1G57770 ATATP-PRT1 AT1G58170 AtHEMA1 ATXYN1 ZCF125 CRR28 CCB4 EMB3108 AT1G60000 DHNS AT1G60590 ABC4 ATFD2 AT1G61190 AT1G61300 ARP2 APR2 AT1G62250 ACO2 FMO FMO AT1G62630 BETA-VPE ATSCO1 AT1G62780 AT1G62950 AT1G63470 AT1G63610 MDAR6 ISPF AT1G64150 REB1 AT1G64500 AT1G64510 BDG1 AT1G64680 NDF2 AMT1;2 RPOD1 AT1G64880 G-TMT CDI Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication). 4CL3 AT1G65070 AT1G65190 AT1G65230 FMO AT1G65870 AT1G66130 AT1G66180 ATGSR2 AtMYB20 AT1G66330 AT1G66430 pde194 PMI2 AT1G66930 GDPDL1 RBCS1A AT1G67690 PSBY CSK AT1G68240 AT1G68260 AT1G68400 AT1G68440 BBX14 CER6 PSRP3/1 AT1G68600 PHO1;H1 AT1G68780 STN7 PHYLLO FLN2 AT1G69420 AT-EXP1 AT1G69730 AT1G70000 AXY4 Encodes a Protease inhibitor/seed storage/LTP family protein AT1G70280 PG2 ATBCA4 AT1G70550 AOAT2 AT1G70600 ABCB26 PGM2 CRR23 CLE17 ATPIN3 AT1G70985 AtGDPD4 AtRLP11 AT1G71480 AT1G71810 ANAC030 AT1G72270 AERO1 AP40 ATEXO70D1 ATGER1 HAB1 EDA17 LPA3 AT1G73110 APC13 AT1G73390 ATPIN1 AT1G73600 ATMPK15 AT1G73700 BBX16 ENO1 AT1G74070 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G74730 NDH-O RPS9 AT1G75090 JAC1 RRA2 RRA1 AT1G75150 emb2184 AtGH9B7 LQY1 ATCDSP32 PETE1 AMY2 AT1G76450 AT1G76530 ACR3 AT1G77090 TAPX LACS9 LYM3 AT1G77670 AT1G77750 GNR1 AT1G77940 AT1G78010 AUF1 AT1G78180 ATGSTU23 ATGSTU20 SPS1 AT1G78995 BRG2 AT1G79150 AtOCT5 EMB1047 AT1G79630 CS17 AT1G80030 AT1G80640 NIP6 AT1G80850 AT1G80870 APG2 AT2G01210 RPI2 ATPIN4 CLE16 CRR3 AHK4 ATPAP8 LCR68 ATMEPCT ATWHY3 AT2G02780 ARPN OTP85 ATEXP15 AT2G03750 AtHsp90.5 ZIP7 AT2G04039 AIR3 FLA7 AT2G04790 EMB2761 LHCB2 PGR5 AT2G05920 ABCC13 MCM5 AT2G13440 AT2G14285 AKN1 AT2G15020 AtTic21 ATHNIR KCS9 BLH7 AT2G17630 ARAC1 AT2G17972 AtPPa2 AT2G18890 TXND9 AT2G19400 AT2G19650 ATPRMT1A PLA2-BETA rps15ab AT2G19780 ATXIG AAS AT2G20450 MEF21 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. AT2G20710 ATEXPB1 PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 AT2G21340 AT2G21385 AT2G21530 ATRL2 ATRNR1 AT2G21830 AT2G21960 SEP2 ATIPS2 CYP79B3 IAA8 CLF NAPRT2 ATMES7 ACL ATMES3 YCF37 AT2G23690 AT2G24020 eIFiso4G2 AT2G24060 PRPL35 PDE319 AT2G24170 AT2G24350 AT2G24580 ATWRKY60 AtENODL14 AT2G25220 AT2G25270 AT2G25530 AtDBP1 ESE2 AT2G25830 OVA4 PYL2 AtGLDP2 CYP711A1 FDH ARSK1 AT2G26500 CYCB1;4 SCAB1 NPC2 BASS2 ATCDPMEK AGO4 AT2G27060 AT2G27360 AT2G27680 AT2G27710 ADT3 CH-CPN60A ACA2 ARF10 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 UXS6 ATEXP6 AT2G29180 AT2G29360 PY ANTR1 AtFAD3 MAPKKK14 ATKT1 PBCP AT2G30320 ATFC-II TCL2 RPT2 AT2G30540 AT2G30695 TCP10 FIONA ATERF15 ATCDT1A BBX25 AT2G31670 AT2G31790 MRL7-L ATCHX21 CVL1 AT2G32060 ATOFP16 PRORP1 BAM6 ATGLR3.7 ARASP ATCSLB03 ATCSLB04 AT2G32640 ATCB5-B ATSUMO5 ATPDI9 ATCOP1 AtPFA-DSP2 AT2G33180 AT2G33255 PDLP3 DAL PRPL28 BUBR1 GALS1 AT2G33735 ATRANGAP2 AT2G34450 AT2G34460 CYP710A2 HMR ABCC2 ATHB-14 NF-YA4 EDA3 CAT5 ATNPSN11 AT2G35260 GDCH AT2G35410 SKL2 ATERF38 AT2G35760 AT2G35840 NHL12 AT2G36145 RPL24A AT2G36630 AtXTH32 MAT3 ABCB1 AT2G36970 ATSIG6 ATPAL1 RIP2 AT2G37100 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 ADK ATRPS5B UMAMIT12 AT2G37500 AT2G37600 AS1 ATEXP3 AT2G37660 AtHBP2 ATCAX1 PDX1L4 PYL4 TBL34 GAUT7 AT2G38730 AT2G39240 SNZ PGP1 ATRPL23A PnsL1 AT2G39670 RCA LHCB4.3 AT2G40200 AT2G40400 HEME2 ETG1 ATEXP8 ARR16 GLY1 ATCAMBP25 AT2G41050 AT2G41090 SSL2 ARR8 AT2G41330 MIZ1 NTRC AT2G41890 AT2G42130 AT2G42220 ATPPC2 ATLEUD1 AT2G43240 AT2G43560 FAB2 UGT74F1 ATHOL1 AT2G43945 AT2G44040 AT2G44230 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 AGP8 KPHMT1 ABIL1 AT2G46250 SPA1 ATCNGC12 ATCB5-C PSAP AtCCA1 AtBOR1 ATNDT1 AT2G47500 PHR2 ABCC4 RPH1 AT3G01060 AtENODL16 AtCGS1 AtSS2 PnsL3 ATCYP38 ATBCA1 LSF1 AT3G01660 AT3G01810 AK3 ATCOL2 AT3G02640 EMB2768 ATF1 AT3G02820 PNT1 VTC4 ATGSTF11 AtUGP1 RGL2 NPC4 AT3G03770 ATMS2 GDH3 AT3G04210 SDG31 EMB3119 AT3G04840 AtRLP31 AT3G05470 ATRAD9 AT3G05560 RPL18 ATSK12 ATSFR2 RWA2 AT3G06680 TRX AT3G07110 AT3G07270 ATYLMG1-1 AT3G07670 PIP5K6 AT3G08600 AT3G08740 ATERDJ3A AT3G09050 AT3G09200 PTAC13 ATEXO70H4 AT3G09580 LCL5 IDH-VI ADK1 OMR1 AT3G10060 GYRB1 AT3G10310 PAL4 CAT7 AT3G10610 GYRA AT3G10760 AT3G10840 LSF2 AtFAD7 ATBSMT1 AT3G11510 CYC2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST AT3G11964 ACT11 AT3G12320 SULTR4;2 DRT100 PGK1 AT3G12930 AT3G13000 AT3G13120 AT3G13180 Cpn60beta2 ATKRS-2 AT3G13510 AGP12 ESM1 AT3G14330 AT3G14390 GOX2 HEME1 mMDH2 PRPS20 SPA3 AT3G15460 AT3G15520 AT3G15680 ADS3 SULTR3;4 MFP1 AT3G16080 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. EMB2083 AT3G16370 AAE7 HCF107 RFC3 ECT6 MAT4 CIPK1 HYH AT3G17640 AT3G17830 RLK902 DAC WOX1 EMB1270 RACK1C AT3G18280 EMB1865 ATUNG ATPUB29 BRU1 ATWNK6 AtTic62 AT3G19030 AT3G19100 ATPREP1 AT3G19300 AT3G19370 ATCAD4 AT3G19480 QWRF1 BCAT4 AT3G20010 AT3G20150 AT3G20200 AT3G20260 PSBTN ATPURC AtBBX32 GluTRBP 4CL2 ABCC8 GLTP3 AT3G21460 UGT84A2 ABCI12 AT3G21690 BBX31 AT3G22150 AT3G22210 ATWNK2 SOL1 ATTSO1 AT3G22810 ELIP ATSR2 AT3G23090 AtRLP37 bHLH34 AT3G23390 FIB4 MED33A XTH16 RALFL24 ATSAHH2 ATTOPII AT3G23930 AT3G23940 ATGR1 AT3G24190 HCF101 PLSP1 CLE41 AT3G25410 AFH1 ATL5 AAPT2 AT3G25660 AT3G25805 CRF11 CLE27 RPL15 ATPRX CYP71B22 AT3G26450 ORF02 AT3G26590 GAPA AT3G26700 CCB1 DRB3 ATTSO2 GHS1 ATCLC-B AT3G27180 AT3G27200 AT3G27540 AT3G27640 EMB3123 RPL12 RPL12-C DEG1 KLCR2 AT3G28040 UMAMIT47 ABCB15 AT3G28760 ATEXP5 ATCM1 CHR38 AAO2 AT3G43610 LTPG2 ATGSTU27 anac061 AT3G44590 AT3G44620 AtKIN14h AT3G44740 ATHD2A RPL9 AtXTH31 AT3G45030 AT3G45430 ATMYB48 FLA4 MAR1 PTAC16 COPT2 DUT1 AT3G47070 AtG3Pp1 PEX11B AT3G47580 AT3G47650 AT3G47830 EDD AT3G48200 AT3G48420 AT3G48425 AT3G48440 AT3G48460 DCF GSA2 AtSWEET11 AT3G48830 ATBBC1 AT3G49220 DMS3 AT3G49640 BAM2 ATBCAT-3 AT3G49810 CRK ICK2 AT3G50685 OEC33 AT3G51140 AT3G51280 TMT3 IMK2 ATG4 AT3G51950 PSRP2 AT3G52170 ATSPP2 CP33 ACA1 FTSZ2-2 AT3G52900 ELL1 AT3G52960 CYP97C1 ATPAL2 MIDD1 AT3G53680 ACT3 ATGCP4 PYRR HCEF1 AT3G54210 TBL36 AT3G54390 AT3G54400 ATGR2 AT3G54750 ATGRXCP AT3G54930 GSTL2 PDE329 PPL1 ATTSC13 OVA1 AT3G55420 ATDFD SBPASE AT3G56010 UGP3 AT3G56160 AT3G56230 AT3G56290 AT3G56300 AT3G56370 PPD6 AT3G56680 PSRP5 BHLH038 BHLH039 AT3G57010 AT3G57020 AT3G57030 ARR9 BPG2 PrfB3 AT3G57400 NAGK ADSS GIS AT3G58140 IPMI1 PME35 ABCC10 GUN4 ATRAD21.2 AT3G59780 AT3G59890 MTHFR1 AT3G60070 AT3G60245 AT3G60540 CDS5 ATHAM2 AT3G60750 AT3G61080 ATPIP1 ARATH;BSAS3;1 AT3G61870 AT3G61950 CYP20-3 UBQ5 CP12 APG3 ATIPT3 CSP41A AtcpRRF OTP86 APG1 EMB3126 AT3G63510 Conceptual translation of this open reading frame gave the sequence of a 229-residue hypothetical protein that contains the same sequence as the mature A. thaliana chloroplast luminal 19-kDa protein linked to a putative signal sequence. AT3G66652 BRCA2(IV) UNE10 ATHAM3 AT4G00165 ATT1 ANTR2 PIP1;4 BAM2 AHDP AT4G00810 AT4G00895 MEE47 AT4G00960 CRK41 TROL GT72B1 HEMG1 ATGPAT3 MCM7 AtGH9B13 AT4G02420 AT4G02530 AT4G02630 EMB3129 AT4G02850 AOP AT4G03090 PETC FIB EMB2369 CRK40 APR ATPC1 AT4G04750 ATMSRB5 ATKEA3 CLS ORL1 ARGAH2 APX4 ATNDK1 CRRJ ATPD ATSPS4F AT4G10300 AT4G10450 AT4G10600 ATOPT7 NDPK3 AT4G11100 AT4G11120 AT4G11175 CRK30 BASS5 AT4G12600 AT4G12830 AtENODL19 EPFL9 AT4G13170 CYP83A1 AT4G13840 SHM4 ATSAHH1 AtPRD1 AT4G14200 PDE226 AT4G14360 ACD6 ATECI3 NF-YB3 AO1 AT4G15000 CYP97B3 ABCG41 AT4G15430 CYP74B2 PPD1 IAGLU AtCLA1 AT4G15640 AT4G15660 AT4G15670 AT4G15680 RALFL33 AT4G16141 AT4G16155 SPK1 ATOPT3 SVR7 AT4G16980 AT-EXPR AtBAM3 ATNS1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 AT4G17560 LIL3:1 AT4G17740 MYC4 DEG5 AT4G18440 AT4G18460 CH-42 RPL16B AtRLP51 AT4G18810 AG CMT2 PAM68 CYCT1;2 AK-HSDH AT4G19985 PTAC14 GSO1 GALS3 ATRAB8D AT4G20760 GHR1 PyrD ATRP1 PSBQ AT4G21770 AT4G21910 APR3 sks4 APT3 AT4G22730 AT4G22830 PGR5-LIKE CCS52A1 AESP CRK17 CRK21 AT4G23670 AtDIR6 AT4G23740 3xHMG-box2 ARC1 ATCSLG3 AT4G24090 AT4G24170 cpHsc70-1 AT4G24350 TAR2 AT4G24750 ATRBP31 AT4G24780 AT4G24790 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) AT4G24830 AT4G24930 TPD1 ACP4 CHLM SKS1 AT4G25290 ATFIB2 B1 AT4G25830 AT4G25870 ABCB2 AtFBA7 AT4G26660 AR192 VTC2 AT4G26860 FAD4 AT4G27360 AtENODL2 AT4G27640 AT4G27700 EMB1923 ATEXPB3 MRL7 PSB28 AMT1;4 GrxC5 AT4G28740 AT4G28780 emb2726 ADS1 AT4G29520 AT4G30020 ATHMA2 AHA2 AT4G30330 AT4G30470 BRS1 AT4G30620 AT4G30800 scpl29 AT4G30825 FAD6 LRL2 AT4G31310 ACDO1 ATCSLC05 AtENODL15 PGR3 ATGPX7 PDE334 ATBT1 Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development. PERK14 ATSDX1 AT4G32915 ATH1 ATCBL10 AtGLDP1 SQD1 AT4G33040 ATPME44 AT4G33400 ATHDA14 AT4G33500 AtHMAC6 AT4G33560 AGD2 AT4G33760 CER4 AT4G34090 SEP1 EDA9 ALDH3 CLB6 ATCAP1 AT4G34555 BLH6 SQS2 AT4G34730 ASE2 MRL1 CAT2 HCF244 AT4G35270 ATGLR3.2 AT4G35320 XCP1 ATSERAT3;2 MCA1 GATA7 ALDH3F1 BGAL3 ROT3 ATRL3 AT4G36640 AtGGPPS11 CBSX1 MAP1D ATHMA1 AT4G37295 SQE3 XTH7 SHM1 pde191 AT4G38520 ATMYB4 AT4G38660 ROC1 AT4G38950 BBX19 AtFBA2 AT4G39040 APL3 ATCAD9 SAMC1 AT4G39630 FKBP16-2 ATIPS1 AKN2 AT4G39960 AT4G39970 LAC8 LAC10 SQD2 AT5G01260 TBL3 ATPDX1 AT5G01590 ATRAPTOR1A AT5G01790 ATCIPK14 ATOFP1 AT5G01890 STN8 OHP AtHsp70-2 AT-HSC70-1 AT5G02610 AT5G02760 LCL1 AT5G02870 AT5G02940 AT5G03140 ATFLA11 LAC11 ADK2 AtNCS1 SBE2.2 TRM28 PTL ATCSLA09 54CP GYRB2 FD-GOGAT ATPAL3 SIR AT5G04840 ATNAS1 AtCHIL EMB2771 AtFAD8 ATEGY2 AT5G05790 UGT76C2 2-Cys AT5G06770 AT5G07020 AT5G07090 ERL2 APC3 ATMSRA2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. SMC6A ATMYB29 AT5G07800 ATRPA70B AtGDPD6 AT5G08050 HEMC AGAL2 AT5G08400 PDE340 AT5G08650 NDC1 AT5G09240 AtPPa6 PMDH2 AT5G09760 AT5G09800 CESA5 AT5G10020 ATMIPS3 AtRABH1e AT5G10390 KAC1 AT5G10605 AT5G10620 AT5G10690 AT5G10920 CIPK5 APT5 HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 TINY2 NDL2 AT5G12110 ATTERC Encodes a protein with similarity to REN1, a Rho GTPase activating protein. DiT1 ATGSL12 ABAP1 ATCYP20-2 AT5G13140 EMB3136 ABAR SVR3 AT5G13770 ATCHS CARAB-AK-LYS ATIMD1 AT5G14210 AT5G14610 ATDEF2 AO AT-P5C1 AT5G15050 AtENODL17 APG6 GAUT14 AtbZIP3 ATCOL1 AT5G15910 AT5G16130 ATF2 AtMYB43 DHAR3 EMB2247 AT5G17010 AT5G17160 ENH1 PSY RVE1 AtUGP2 AT5G17350 AT5G17630 AT5G17660 AT5G17670 AT5G17700 EMB1241 PSRP6 encodes an adenylyltransferase ATOBGC PCB2 BAM9 AGP25 EMB3013 ADG2 AT5G19240 SULTR3;5 ATOEP80 AT5G19730 AT5G19760 AT5G19970 AtHBP5 PHT4;5 ATMGD2 ATBRXL4 ATGER3 AT5G20700 ATCPN21 CRR42 AT5G21060 AT5G21100 AT5G21222 ATCKX5 AT5G22340 anac090 AT5G22440 emb1211 EMB1030 H2B IMS3 IMS2 CaS HCF136 FSD3 AT5G23480 EFO2 ARC11 ATSIG5 SQE5 ATSS1 PGL5 LSU2 AT5G24760 CRY3 ESE3 AT5G25590 tny AT5G26010 AT5G26200 AT5G26330 SHM2 ATIREG3 AT5G27240 AT5G27290 SFP2 AT5G27390 MK AT5G27560 AT5G28500 BIP1 AT5G28750 ARRPS1 AT5G35170 AMOS1 ATGSL1 G6PD1 AT5G35970 atylmg3 ARF8 CIR1 CML24 AT5G37790 ASF1B RBCS3B AT5G38520 APE1 CRR7 CDF2 OLI7 DEG8 AT5G40060 EMB139 CRK42 UPM1 RPL27 DRB5 RPS10B AT5G41760 BIP AT5G42070 ATBG_PPAP ARC6 ATS CYCA3;1 AT5G43150 NF-YC13 TZP NDH18 KCS20 AT5G43870 SDG18 AT5G44050 TAO1 AT5G44520 MCM6 AtCEST GALS2 AT5G44680 AT5G45060 AtPP2-A6 AT5G45170 ATFKBP13 AT5G45720 AT5G45775 CHL AT5G45950 AT5G46220 AT5G46270 MCM3 AT5G46390 AT5G46450 BSK2 AT5G46580 bHLH071 TET1 PYL1 BOU Encodes the mitochondrial ATP synthase subunit delta. LIL3:2 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT5G47620 NF-YB2 AMK2 AT5G47970 GFA2 ADG1 AT5G48360 HINT3 AT5G48740 AT5G48790 ATPTS ATSDI1 LPA66 TED7 HCT ATPRMT4A OVA2 ATMYB111 ATFRO7 MMT cpHsc70-2 AT5G50100 AT5G50110 AtPIMT2 CP31B AT5G50420 ATRBOHC FSD2 AT5G51110 AT5G51310 ATTPPA AT5G51560 At-NEET ATPGMP AT5G52010 OVA6 B2 AT5G52780 AT5G52950 AT5G52970 AT5G53070 TRY PDV1 ATPMEPCRF AT5G53500 AtPLR1 ATMLO11 AT5G53900 AT5G53920 ATOMT1 PTAC15 THE1 AHL CRLK1 RPL24 ANK ATK3 AT5G55220 ATFTSZ1-1 GDPDL4 AT5G55520 AT5G55620 CRR21 AtHsp90.2 AT5G56040 ATEXP14 PFN3 AT5G56840 AT5G56850 AT5G56890 LUT2 AT5G57170 AT5G57345 AT5G57610 CER3 APO2 NPL1 AT5G58160 NdhN AT5G58330 AT5G58480 DDB2 AtcPT4 ftsh9 AT5G59250 WOX2 AT5G59500 AtZIP2 AT5G59600 AT5G59610 AT5G59740 AtRIBA3 AT5G59850 HTA6 ULI3 ATLAC17 AT5G60130 AtFLA12 CLB4 AT5G60670 ATMYB34 ATRPA70D PDCB1 AT5G61170 AT5G61350 AtMYB28 AT5G61570 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ATCNX1 AGD1 AGL42 ATGT18 ANAC101 CDF1 AHA11 DXR AT5G62840 AT5G62890 ARR6 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. ATFP3 ATRMI1 GSA1 AT5G63700 ATERS DiT2.2 DCT ATGCH EMB3144 AT5G64850 AT5G64970 ASN2 ANNAT2 AT5G65360 BAM1 XTH6 ATLFNR1 AT5G66230 AT5G66310 AT5G66470 AT5G66520 AT5G66740 ATDDM1 AT5G66770 ABA1 RALFL34 ICU2 EPS1 AT5G67200 RLK MATK
GO:0008152 metabolic process	BP	2.603e-98	LHY AT1G01080 KCS1 CYP78A8 AT1G01390 ASG4 ATGPAT4 ATSBT1.1 CER1 ATGPAT2 GATL5 ATCSLD5 LPA1 ATWEE1 AtD27 AtBE2 POR ATBARD1 AT1G04040 SDG13 KCS2 AXR3 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT1G04420 AT1G04480 PDLP2 BDL LIP2 AT1G04680 KAT1 CTF18 ATPDI10 AT1G05140 emb2394 LPA19 UGT1 BT3 AT1G05870 ATNTH2 AT1G06250 AT1G06360 FTSH8 AT1G06550 AT1G06690 CCR2 AtSLP1 ATNDI1 EMB2784 ATPCNA1 AT1G07450 AT1G07700 KCS3 ATLIG1 ADT6 AT1G08280 ABC1 CJD1 ATPPCK1 emb2411 BIP3 AT1G09310 CRB AT1G09390 AT1G09440 similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase AT1G09590 AT1G09690 iPGAM1 ATGSTU18 ATGSTU17 AT1G10585 AT1G10640 AT1G10740 Z-ISO AT1G10850 AT1G10900 ATRECQ4A ATFD1 SCM CRR22 AT1G11300 AT1G11410 ATPMEPCRA AT1G11670 ATSS3 ADT1 ATGLX1 AT1G11860 ATSRS ATNRT1 FMO AT1G12244 SUMM2 PHR1 AT1G12460 AT1G12500 HPR3 AT1G12800 GAPA-2 CYP71B2 AT1G13130 AT1G13650 AT1G13730 LSMT-L PnsL2 AT1G14270 AT1G14345 AtMYB124 ATWHY1 AT1G14460 AT1G14600 AT1G15140 AT1G15165 AT1G15410 ATECB2 ATGA3OX1 CYCA2;3 AT1G15710 CP24 AT1G15930 AT1G15970 NDF1 AT1G16080 CYP79F2 BUS1 HCF173 UP6 ACR11 SPS2 AtHBP1 FUG1 GLYR2 AT1G18060 AT1G18090 AT1G18170 ATNACK1 AT1G18440 AT1G18485 AT1G18540 ATSOT17 NDF6 AT1G19140 LHCA2*1 BES1 AT1G19490 JMT ATCLH1 AT1G19680 APS2 AtGH9B5 ATLFNR2 DRT112 AT1G20810 AT1G20950 AT1G21350 ATOGG1 LYM1 ATPIP5K1 AGL87 AT1G22630 AT1G22850 AT1G23030 AT1G23410 AOR MLP423 GATL8 G6PD3 AT1G25510 AtPERK10 ATSOFL1 Cpn60beta4 BGLU40 AT1G26790 AT1G26880 AtHB23 ATHB54 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. AT1G27120 SPL11 AT1G27480 SCPL45 AT1G28395 AT1G28530 SRD2 AT1G28570 AT1G28610 AT1G28660 ARAB-1 AT1G29660 AT1G29700 AT1G29720 AB165 PSAK AAE14 UGT78D1 AT1G30600 GlcNAc1pUT1 ATIMD3 IMPL1 AK-HSDH AT1G31690 CYP97A3 AT-IE AT1G31920 STRS1 PRK ATPRR1 AT1G32160 ACT1 AT1G32220 NRT1.5 AT1G32470 ABCI7 FdC2 AT1G32730 AT1G32780 GBSS1 PRPL11 AT1G33110 AT1G33260 AtGXMT1 ATSERK2 AT1G35340 At-FANCM AT1G35560 RPL21C AT1G36280 SHM7 AT1G36390 ATNR2 SKS6 AT1G41880 GAPB Aty2 ATCAO CP22 ATMCM2 AT1G44920 BGLU1 ATTLL1 Lhca5 CYCA3;2 DYW1 mtLPD1 AT1G48100 CIPK17 EMB3105 RKL1 GATB RACK1B AT1G49010 AT1G49380 LACS2 AT1G49580 ATPREP2 AtCXE5 AT1G49740 AT1G49975 FTSH1 ATHX AT1G50450 AT1G50575 POLGAMMA2 GDC1 bHLH115 AT1G51080 AT1G51110 AT1G51340 Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols. ABCG12 4CL.1 AT1G51805 AT1G52220 PSAH-2 AtPERK15 ABA2 AT1G52510 PLDALPHA2 ATRBL5 SPA4 mMDH1 ATMUM4 ATGSTU28 PK3AT AT1G54050 AT1G54220 ABCD2 AT1G54500 AtTLP18.3 AT1G54790 AT1G54820 AT1G55140 AT1G55200 AT1G55210 AT1G55260 AAE18 AGP21 AT1G55360 NDF5 AT1G55380 ZKT CPN60B AT1G55690 AT1G55960 HAC04 AT1G56050 AT1G56190 ATNAS4 AT1G56500 AT1G56670 AT1G56720 AtMYB50 AT1G57660 AT1G57770 ATATP-PRT1 AT1G58170 AtHEMA1 ATXYN1 RXW8 ZCF125 CRR28 CCB4 AT1G59970 EMB3108 AT1G60000 BGLU5 BGLU6 DHNS AT1G60590 ABC4 ATFD2 AT1G61190 AT1G61300 ARP2 AT1G62030 APR2 AT1G62250 ACO2 FMO FMO AT1G62630 BETA-VPE ATSCO1 AT1G62780 AT1G62950 AT1G63470 AT1G63610 MDAR6 ISPF AtGH9C2 REB1 AT1G64500 AT1G64510 BDG1 AT1G64680 NDF2 AMT1;2 RPOD1 AT1G64880 CYP89 G-TMT 4CL3 AT1G65070 AT1G65190 AT1G65230 ATHEX1 FMO AT1G65870 AT1G66130 AT1G66180 ATGSR2 AtMYB20 AT1G66330 AT1G66430 pde194 AT1G66540 AT1G66930 GDPDL1 RBCS1A AT1G67690 PSBY CSK AT1G68240 AT1G68260 AT1G68400 AT1G68440 BBX14 CER6 PSRP3/1 AT1G68600 AT1G68660 PHO1;H1 STN7 PHYLLO FLN2 AT1G69523 AT1G69526 AT1G69730 AT1G70000 GATL9 AXY4 Encodes a Protease inhibitor/seed storage/LTP family protein AT1G70280 PG2 ATBCA4 AT1G70550 AOAT2 AT1G70600 ABCB26 PGM2 CRR23 ATPIN3 AT1G70985 AtGDPD4 AtRLP11 AT1G71480 AT1G71500 AT1G71810 ANAC030 AT1G72030 AT1G72270 AERO1 AP40 AT1G72430 HAB1 EDA17 LPA3 AT1G73110 APC13 AT1G73390 ATPIN1 AT1G73600 AT1G73650 ATMPK15 BBX16 ENO1 AT1G74070 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NDH-O RPS9 AT1G75090 AT1G75150 emb2184 AtGH9B7 LQY1 ATCDSP32 PETE1 AMY2 AT1G76450 ACR3 AT1G77090 TAPX LACS9 LYM3 AT1G77670 AT1G77750 GNR1 AT1G77940 AT1G78010 AT1G78060 ATGSTU23 ATGSTU20 SPS1 AT1G78995 AT1G79150 AtOCT5 EMB1047 AT1G79630 CS17 AT1G80030 AT1G80640 NIP6 AT1G80850 AT1G80870 APG2 AT2G01210 RPI2 ATPIN4 CRR3 AHK4 ATPAP8 LCR68 ATMEPCT ATWHY3 AT2G02780 ARPN OTP85 AT2G03020 ATEXP15 AT2G03750 AtHsp90.5 AT2G04039 AIR3 FLA7 AT2G04790 EMB2761 LHCB2 PGR5 AT2G05920 MCM5 AT2G13440 AT2G14285 AKN1 AT2G15020 ATHNIR KCS9 BLH7 AT2G17630 AT2G17972 AtPPa2 AT2G18890 AT2G19400 AT2G19650 ATPRMT1A rps15ab AAS AT2G20450 MEF21 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 XK-1 AT2G21385 AT2G21530 ATRL2 ATRNR1 AT2G21830 AT2G21860 AT2G21960 SEP2 ATIPS2 CYP79B3 AT2G22420 IAA8 scpl10 SCPL9 CLF NAPRT2 ATMES7 ACL ATMES3 YCF37 AT2G23690 scpl23 AT2G24020 eIFiso4G2 AT2G24060 PRPL35 PDE319 HHP3 AT2G24170 SDR2 AT2G24350 AT2G24580 AtTic55 ATWRKY60 AtENODL14 AT2G25220 AT2G25530 AtDBP1 ESE2 AT2G25830 OVA4 PYL2 AtGLDP2 CYP711A1 FDH ARSK1 AT2G26500 CYCB1;4 NPC2 BASS2 ATCDPMEK AGO4 AT2G27060 AT2G27360 AT2G27420 AT2G27680 AT2G27710 ADT3 CH-CPN60A ACA2 ARF10 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 UXS6 ATRBL1 AT2G29170 AT2G29180 AT2G29290 AT2G29320 AT2G29360 PY ANTR1 AtFAD3 MAPKKK14 AT2G30150 PBCP AT2G30320 ATFC-II TCL2 RPT2 AT2G30695 TCP10 FIONA ATERF15 ATCDT1A BBX25 AT2G31670 AT2G31790 MRL7-L CVL1 AT2G32060 ATOFP16 PRORP1 BAM6 ARASP ATCSLB03 ATCSLB04 AT2G32640 ATCB5-B ATSUMO5 ATPDI9 ATCOP1 AtPFA-DSP2 AtGH9B8 AT2G33180 AT2G33255 DAL PRPL28 scpl46 BUBR1 GALS1 AT2G33735 AT2G34060 AT2G34460 CYP710A2 AtCCP1 HMR ABCC2 ATHB-14 NF-YA4 EDA3 AT2G35260 GDCH AT2G35410 SKL2 CTF2A ATERF38 AT2G35760 AT2G35840 NHL12 AT2G36145 RPL24A AT2G36630 DOGT1 AtXTH32 MAT3 AT2G36970 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 ADK ATRPS5B UMAMIT12 AT2G37500 AT2G37600 AS1 AT2G37660 AKR4C9 AtHBP2 ATCAX1 PDX1L4 TBL34 AT2G38380 GAUT7 AT2G38730 AT2G38740 AT2G39240 SNZ PGP1 ATRPL23A PnsL1 AT2G39670 RCA LHCB4.3 AT2G40200 AT2G40400 HEME2 ETG1 ARR16 GLY1 ATCAMBP25 AT2G41050 AT2G41250 SSL2 ARR8 AT2G41330 NTRC AT2G41890 AT2G42130 AT2G42220 ATPPC2 AT2G42980 NPG1 ATLEUD1 AT2G43560 FAB2 UGT74F1 ATHOL1 ATHOL2 AT2G43945 AT2G44040 AT2G44230 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 KPHMT1 AT2G46250 SPA1 ATCB5-C PSAP AtCCA1 PHR2 RPH1 AT3G01060 AtENODL16 AtCGS1 AtSS2 PnsL3 ATCYP38 ATBCA1 LSF1 ATPPT2 AT3G01660 AT3G01810 AK3 scpl25 AT3G02640 EMB2768 ATF1 AT3G02820 PNT1 VTC4 ATGSTF11 AtUGP1 RGL2 NPC4 AT3G03770 ATMS2 GDH3 ATLTL1 emb2458 SDG31 EMB3119 AT3G04840 AT3G05180 AT3G05190 ATRAD9 AT3G05560 RPL18 ATSK12 ATSFR2 AT3G06680 TRX AT3G07110 AT3G07270 ATYLMG1-1 AT3G07670 PIP5K6 AT3G08600 AT3G08740 ATERDJ3A AT3G09050 AT3G09200 PTAC13 AT3G09580 LCL5 IDH-VI ADK1 OMR1 AT3G10060 GYRB1 AT3G10310 PAL4 CYP77A6 AT3G10610 GYRA AT3G10760 AT3G10840 LSF2 AtFAD7 ATBSMT1 AT3G11510 CYC2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST AT3G11964 ACT11 AT3G12320 PGK1 AT3G12930 AT3G13000 AT3G13120 AT3G13180 Cpn60beta2 ATKRS-2 AT3G13510 AGP12 AT3G13560 ESM1 AT3G14220 AT3G14330 AT3G14390 GOX2 CYP72A11 HEME1 mMDH2 AT3G15090 PRPS20 SPA3 AT3G15460 AT3G15520 ADS3 MFP1 AT3G16080 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. EMB2083 AT3G16370 AAE7 HCF107 RFC3 ECT6 MAT4 CIPK1 HYH AT3G17830 RLK902 DAC WOX1 EMB1270 RACK1C AT3G18280 EMB1865 ATUNG ATPUB29 ATWNK6 AtTic62 AT3G19030 AT3G19100 ATPREP1 AT3G19300 AT3G19370 ATCAD4 AT3G19480 BCAT4 AT3G20010 CYP705A19 AT3G20150 AT3G20200 AT3G20260 AT3G20790 PSBTN ATPURC AtBBX32 GluTRBP 4CL2 GLTP3 UGT84A2 ABCI12 UGT71B1 BBX31 AT3G22150 AT3G22210 ATWNK2 ATTSO1 ELIP ATSR2 AT3G23090 bHLH34 AT3G23390 ATFAO3 AT3G23510 AT3G23530 MED33A XTH16 ATSAHH2 ATTOPII AT3G23930 AT3G23940 ATGR1 AT3G24190 HCF101 PLSP1 AFH1 ATL5 AAPT2 AT3G25660 AT3G25700 AT3G25805 CRF11 RPL15 ATPRX AT3G26085 CYP86C2 CYP71B22 CYP71B35 CYP71B36 AT3G26450 ORF02 GAPA AT3G26700 CCB1 DRB3 ATTSO2 GHS1 AT3G27180 AT3G27200 AT3G27510 AT3G27540 AT3G27640 EMB3123 RPL12 RPL12-C DEG1 AT3G28040 UMAMIT47 AT3G28760 ATCM1 CHR38 AAO2 LTPG2 ATGSTU27 anac061 AT3G44590 AT3G44620 AtKIN14h AT3G44740 ATHD2A RPL9 AtXTH31 AT3G45030 AT3G45430 ATMYB48 AT3G46490 AT3G46650 UGT76E11 PTAC16 DUT1 AT3G47070 PEX11B AT3G47580 AT3G47650 AT3G47830 EDD AT3G48200 CYP71A25 CYP71A24 CYP71A21 AT3G48420 AT3G48425 AT3G48440 AT3G48460 DCF GSA2 AT3G48830 ATBBC1 AT3G49220 DMS3 AT3G49640 BAM2 ATBCAT-3 AT3G49810 CRK ICK2 AT3G50685 OEC33 AT3G51140 AT3G51280 IMK2 ATG4 AT3G51950 PSRP2 ATSPP2 CP33 ACA1 AT3G52740 FTSZ2-2 AT3G52900 ELL1 AT3G52960 CYP97C1 ATPAL2 AT3G53680 ATGCP4 PYRR HCEF1 AT3G54210 TBL36 AT3G54390 AT3G54400 ATGR2 AT3G54750 ATGRXCP GSTL2 PDE329 PPL1 ATTSC13 OVA1 ATDFD SBPASE AT3G56010 UGP3 AT3G56230 AT3G56290 AT3G56300 AT3G56370 PPD6 AT3G56680 PSRP5 BHLH038 BHLH039 AT3G57010 AT3G57020 AT3G57030 ARR9 BPG2 PrfB3 AT3G57400 NAGK ADSS GIS AT3G58140 IPMI1 GUN4 ATRAD21.2 AT3G59780 AT3G59890 MTHFR1 AT3G60245 CDS5 ATHAM2 AT3G60750 AT3G61080 SDR1 ATPIP1 ARATH;BSAS3;1 AT3G61870 AT3G61950 CYP20-3 UBQ5 CP12 APG3 ATIPT3 CSP41A AtcpRRF PLA OTP86 APG1 EMB3126 AT3G63510 Conceptual translation of this open reading frame gave the sequence of a 229-residue hypothetical protein that contains the same sequence as the mature A. thaliana chloroplast luminal 19-kDa protein linked to a putative signal sequence. AT3G66652 BRCA2(IV) UNE10 ATHAM3 AT4G00165 ATT1 ANTR2 BAM2 AHDP AT4G00810 AT4G00895 MEE47 AT4G00960 CRK41 TROL GT72B1 HEMG1 ATGPAT3 MCM7 AtGH9B13 AT4G02420 AT4G02530 AT4G02630 EMB3129 AT4G02850 AOP AT4G03090 AT4G03140 PETC FIB EMB2369 CRK40 APR ATPC1 ATMSRB5 ATMSRB6 ATKEA3 CLS SAPX ORL1 ARGAH2 APX4 ATNDK1 CRRJ ATPD ATSPS4F AT4G10300 AT4G10450 AT4G10600 NDPK3 AT4G11100 AT4G11120 AT4G11175 AT4G11290 CRK30 BASS5 CYP706A6 AT4G12600 AT4G12830 scpl20 EPFL9 AT4G13170 AT4G13550 CYP83A1 AT4G13840 SHM4 ATSAHH1 The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. AtPRD1 AT4G14200 PDE226 AT4G14360 ATECI3 NF-YB3 AO1 AT4G15000 CYP97B3 AT4G15430 CYP74B2 PPD1 IAGLU AtCLA1 AT4G15640 AT4G16141 AT4G16155 SPK1 ATOPT3 SVR7 AT4G16980 AtBAM3 ATNS1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 AT4G17560 LIL3:1 AT4G17740 MYC4 DEG5 AT4G18440 AT4G18460 CH-42 RPL16B AT4G18810 AG AT4G18970 CMT2 PAM68 AT4G19380 CYCT1;2 AK-HSDH AT4G19985 PTAC14 GSO1 AT4G20230 ATRAB8D AT4G20760 AT4G20840 GHR1 PyrD ATRP1 PSBQ AT4G21650 BGLU47 AT4G21770 APR3 sks4 BGLU3 APT3 AT4G22730 AT4G22830 PGR5-LIKE CCS52A1 AESP CRK17 CRK21 AT4G23670 AtDIR6 AT4G23740 3xHMG-box2 ATCSLG3 AT4G24090 cpHsc70-1 AT4G24350 TAR2 AT4G24750 ATRBP31 AT4G24790 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) AT4G24830 AT4G24930 ACP4 CHLM SKS1 AT4G25290 ATFIB2 B1 AT4G25830 AT4G25870 AtFBA7 AT4G26660 AR192 AT4G26830 VTC2 AT4G26860 FAD4 AtENODL2 AT4G27640 AT4G27700 CYP709B3 EMB1923 MRL7 PSB28 GrxC5 AT4G28740 AT4G28780 emb2726 AT4G29520 AT4G29590 AT4G30020 ATHMA2 AHA2 AT4G30330 AT4G30470 BRS1 AT4G30620 AT4G30800 scpl29 AT4G30825 FAD6 LRL2 AT4G31310 ACDO1 AtENODL15 PGR3 ATGPX7 PDE334 ATBT1 Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development. PERK14 ATSDX1 AT4G32915 ATH1 ATCBL10 AtGLDP1 SQD1 AT4G33110 AT4G33400 ATHDA14 AT4G33500 AtHMAC6 AT4G33560 AGD2 AT4G33760 CER4 AT4G33810 AT4G34090 SEP1 EDA9 ALDH3 CLB6 ATCAP1 AT4G34555 BLH6 SQS2 AT4G34730 ASE2 MRL1 CAT2 HCF244 AT4G35270 XCP1 ATSERAT3;2 AT4G35880 MCA1 AT4G36190 GATA7 ALDH3F1 BGAL3 ROT3 ATRL3 AT4G36640 AtGGPPS11 MAP1D ATHMA1 CYP81D5 LBD39 AT4G37560 SQE3 XTH7 NDH-M SHM1 pde191 sks9 AT4G38520 ATMYB4 ROC1 BBX19 AtFBA2 AT4G39040 APL3 ATCAD9 SAMC1 CYP96A12 AT4G39630 FKBP16-2 ATIPS1 AKN2 AT4G39960 AT4G39970 LAC8 AT5G01075 LAC10 SQD2 AT5G01260 TBL3 ATPDX1 AT5G01590 ATCIPK14 ATOFP1 AT5G01890 STN8 OHP AT5G02230 Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ABCI20 AtHsp70-2 AT-HSC70-1 AT5G02610 AT5G02760 LCL1 AT5G02870 AT5G02940 AT5G03140 CPUORF47 LAC11 ADK2 AtNCS1 AT5G03620 SBE2.2 PTL 54CP GYRB2 FD-GOGAT AtMC9 ATPAL3 SIR AT5G04840 ATNAS1 AtCHIL EMB2771 AtFAD8 ATEGY2 AT5G05790 UGT76C2 2-Cys AT5G06770 AT5G07020 AT5G07030 AT5G07090 ERL2 ATMSRA2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. SMC6A ATMYB29 AT5G07800 ATRPA70B AtGDPD6 AT5G08050 scpl35 HEMC AGAL2 AT5G08400 PDE340 ATFLS1 AT5G08650 NDC1 AT5G09240 AtPPa6 PMDH2 AT5G09800 CESA5 AT5G10020 ATMIPS3 AT5G10605 AT5G10620 AT5G10690 AT5G10770 AT5G10920 CIPK5 APT5 HY5 OCP3 AT5G11330 PPD5 AT5G11480 AtMYB3R4 TINY2 AT5G12110 ATTERC Encodes a protein with similarity to REN1, a Rho GTPase activating protein. DiT1 ATGSL12 ABAP1 ATCYP20-2 AT5G13140 EMB3136 ABAR SVR3 ATCHS CARAB-AK-LYS ATIMD1 AT5G14210 AT5G14650 ATDEF2 AO AT-P5C1 AT5G15050 AtENODL17 APG6 GAUT14 AtbZIP3 ATCOL1 AT5G15910 AT5G15940 AT5G16130 ATF2 AtMYB43 DHAR3 EMB2247 AT5G17000 AT5G17040 UGT78D2 AT5G17160 ENH1 PSY RVE1 AtUGP2 AT5G17350 AT5G17660 AT5G17670 EMB1241 PSRP6 encodes an adenylyltransferase ATOBGC PCB2 BAM9 AGP25 EMB3013 ADG2 AT5G19240 ATOEP80 AT5G19730 AT5G19760 AtHBP5 ATMGD2 ATBRXL4 ATGER3 AT5G20700 ATCPN21 CRR42 AT5G21060 AT5G21100 AT5G21222 ATCKX5 AT5G22340 anac090 AT5G22440 AT5G22620 emb1211 EMB1030 IMS3 IMS2 CaS HCF136 FSD3 AT5G23480 ATSIG5 SQE5 AT5G24155 ATSS1 PGL5 LSU2 AT5G24760 CRY3 CYP71B12 ESE3 AT5G25590 tny AT5G26010 AT5G26330 SHM2 AT5G27240 AT5G27390 MK AT5G27560 AT5G28500 BIP1 ARRPS1 AT5G35170 AMOS1 ATGSL1 G6PD1 AT5G35970 atylmg3 ATPGLP1 AT5G36790 DEG10 ARF8 CIR1 WSD1 CML24 AT5G37790 ASF1B 4CL8 RBCS3B RBCS2B RBCS1B AT5G38510 AT5G38520 APE1 CRR7 CDF2 OLI7 DEG8 AT5G40060 AT5G40150 CRK42 UPM1 RPL27 DRB5 RPS10B AT5G41760 BIP AT5G42070 ATBG_PPAP scpl42 ARC6 ATS AT5G42720 CYCA3;1 AT5G43150 NF-YC13 TZP NDH18 KCS20 SDG18 ABCI21 AT5G44390 AT5G44400 AT5G44410 AT5G44520 AT5G44530 MCM6 AtCEST AT5G44680 AT5G45170 AT5G45280 ATFKBP13 AT5G45720 AT5G45775 CHL AT5G45950 AT5G45960 AT5G46220 MCM3 AT5G46390 BSK2 AT5G46580 bHLH071 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. LIL3:2 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT5G47620 NF-YB2 AMK2 AT5G47970 GFA2 ADG1 AT5G48360 HINT3 AT5G48740 AT5G48790 ATPTS LPA66 HCT ATPRMT4A OVA2 AT5G49215 ATMYB111 ATFRO6 ATFRO7 MMT cpHsc70-2 AT5G50100 AT5G50110 AtPIMT2 CP31B AT5G51030 ATRBOHC FSD2 AT5G51110 AT5G51310 ATTPPA AT5G51560 At-NEET ATPGMP encodes peroxidase involved in the lignification of tracheary elements (TE) in roots AT5G52010 CYP96A4 OVA6 B2 AT5G52780 AT5G52950 AT5G52970 AT5G53070 TRY ATPMEPCRF AtPLR1 AT5G53920 ATOMT1 PTAC15 THE1 AHL CRLK1 RPL24 ANK AT5G55220 ATFTSZ1-1 GDPDL4 AT5G55520 CRR21 AtHsp90.2 AT5G56040 AtGulLO4 AT5G56840 AT5G56850 AT5G56890 LUT2 AT5G57040 AT5G57610 CER3 APO2 NPL1 NdhN AT5G58330 AT5G58390 AT5G58480 DDB2 AtcPT4 ftsh9 AT5G59130 AT5G59250 AT5G59500 AT5G59600 AT5G59610 AT5G59740 AtRIBA3 AT5G59850 ULI3 ATLAC17 AT5G60130 AT5G60335 CLB4 AT5G60670 ATMYB34 ATRPA70D PDCB1 AT5G61170 AT5G61350 EMB2728 AtMYB28 AT5G61570 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ATCNX1 AGL42 ATGT18 ANAC101 CDF1 AHA11 DXR AT5G62840 ARR6 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. ATRMI1 GSA1 AT5G63700 ATERS DCT ATGCH EMB3144 AT5G64850 ASN2 ANNAT2 BAM1 XTH6 AT5G65840 ATLFNR1 AT5G66230 AT5G66470 AT5G66520 ATDDM1 AT5G66770 ABA1 ICU2 EPS1 AT5G67200 RLK MATK
GO:0009657 plastid organization	BP	3.916e-97	LPA1 POR AT1G04770 emb2394 CCR2 ABC1 CRB AT1G11860 ATSRS AT1G12800 GAPA-2 LSMT-L ATECB2 AT1G16080 FUG1 AT1G18060 ATLFNR2 DRT112 AT1G21350 PRK AtLrgB AT1G32470 ABCI7 PRPL11 RPL21C AT1G36390 GAPB Aty2 AT1G44000 CP22 AT1G44920 Lhca5 AT1G49380 POLGAMMA2 GDC1 AT1G51110 AT1G52220 PSAH-2 AtTLP18.3 AT1G56500 ATSCO1 AT1G62780 ISPF AT1G64500 AT1G64510 AT1G65230 PMI2 PSBY CER6 PSRP3/1 FLN2 AT1G73110 JAC1 emb2184 LQY1 AT1G76450 TAPX EMB1047 CS17 AT1G80030 APG2 AtHsp90.5 PSB29 PDTPI ATSULA AtFBA1 AT2G21530 YCF37 OVA4 AT2G26500 AT2G27680 CH-CPN60A MAPKKK14 PBCP AT2G30695 TCP10 FIONA ATCDT1A MRL7-L ARASP DAL HMR EDA3 GDCH AT2G35410 ATSIG6 AT2G39670 MIZ1 NTRC AT2G42130 AT2G43560 SPA1 PSAP ATCYP38 ATCOL2 EMB2768 TRX ATYLMG1-1 AT3G07670 AT3G09050 PTAC13 PGK1 AT3G13120 AT3G13180 Cpn60beta2 ATKRS-2 MFP1 HCF107 DAC EMB1270 EMB1865 ATPREP1 QWRF1 PSBTN FIB4 HCF101 PLSP1 GAPA CCB1 EMB3123 MAR1 PTAC16 AT3G47070 AT3G47650 EDD AT3G48200 AT3G48420 OEC33 AT3G51140 ATG4 CP33 FTSZ2-2 HCEF1 ATGR2 PDE329 PPL1 SBPASE AT3G56290 PPD6 PSRP5 PrfB3 AT3G58140 AT3G61870 APG3 CSP41A AtcpRRF EMB3126 TROL AT4G02530 EMB3129 PETC EMB2369 ATPC1 ATPD AT4G11175 SVR7 LIL3:1 PTAC14 PSBQ PGR5-LIKE ARC1 cpHsc70-1 AT4G24750 ACP4 EMB1923 MRL7 AT4G28740 emb2726 PGR3 PDE334 ATH1 ATHDA14 AT4G33760 SEP1 AT4G34730 ASE2 MRL1 pde191 AtFBA2 SAMC1 FD-GOGAT ATEGY2 2-Cys AT5G07020 AT5G08050 AT5G08650 PMDH2 KAC1 PPD5 AT5G11480 ATTERC EMB3136 AT5G13770 ATDEF2 APG6 DHAR3 EMB2247 ENH1 ATOBGC ADG2 ATOEP80 ATCPN21 emb1211 CaS HCF136 EFO2 ARC11 ATSIG5 LSU2 ARRPS1 AMOS1 atylmg3 AT5G38520 DEG8 EMB139 ARC6 NDH18 AtCEST ADG1 OVA2 CP31B FSD2 AT5G51110 OVA6 AT5G52970 PDV1 PTAC15 RPL24 AT5G55220 ATFTSZ1-1 NPL1 AT5G58330 CLB4 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. CDF1 ATERS EMB3144 ATLFNR1 AT5G66470
GO:0071704 organic substance metabolic process	BP	7.471e-95	LHY AT1G01080 KCS1 ASG4 ATGPAT4 ATSBT1.1 CER1 ATGPAT2 GATL5 ATCSLD5 ATWEE1 AtD27 AtBE2 POR ATBARD1 AT1G04040 SDG13 KCS2 AXR3 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT1G04420 AT1G04480 PDLP2 BDL LIP2 AT1G04680 KAT1 CTF18 ATPDI10 AT1G05140 emb2394 LPA19 UGT1 BT3 AT1G05870 ATNTH2 AT1G06250 AT1G06360 FTSH8 AT1G06550 CCR2 AtSLP1 ATNDI1 EMB2784 ATPCNA1 AT1G07700 KCS3 ATLIG1 ADT6 AT1G08280 ABC1 CJD1 ATPPCK1 emb2411 BIP3 AT1G09310 CRB AT1G09390 AT1G09440 similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase AT1G09590 AT1G09690 iPGAM1 ATGSTU18 ATGSTU17 AT1G10585 AT1G10640 AT1G10740 Z-ISO AT1G10850 AT1G10900 ATRECQ4A ATFD1 SCM CRR22 AT1G11300 AT1G11410 ATPMEPCRA AT1G11670 ATSS3 ADT1 ATGLX1 AT1G11860 ATSRS ATNRT1 AT1G12244 SUMM2 PHR1 AT1G12460 AT1G12500 AT1G12800 GAPA-2 AT1G13130 AT1G13650 AT1G13730 LSMT-L PnsL2 AT1G14270 AT1G14345 AtMYB124 ATWHY1 AT1G14460 AT1G14600 AT1G15165 AT1G15410 ATECB2 ATGA3OX1 CYCA2;3 AT1G15710 CP24 AT1G15930 AT1G15970 NDF1 AT1G16080 CYP79F2 BUS1 HCF173 UP6 SPS2 AtHBP1 FUG1 GLYR2 AT1G18060 AT1G18090 AT1G18170 ATNACK1 AT1G18440 AT1G18485 AT1G18540 ATSOT17 NDF6 AT1G19140 LHCA2*1 BES1 AT1G19490 JMT ATCLH1 AT1G19680 AtGH9B5 ATLFNR2 DRT112 AT1G20810 AT1G20950 ATOGG1 LYM1 ATPIP5K1 AGL87 AT1G22630 AT1G22850 AT1G23030 AT1G23410 AOR MLP423 GATL8 G6PD3 AT1G25510 AtPERK10 ATSOFL1 Cpn60beta4 BGLU40 AT1G26790 AT1G26880 AtHB23 ATHB54 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. AT1G27120 SPL11 AT1G27480 SCPL45 AT1G28395 AT1G28530 SRD2 AT1G28570 AT1G28610 AT1G28660 ARAB-1 AT1G29660 AT1G29700 AT1G29720 PSAK AAE14 UGT78D1 AT1G30600 GlcNAc1pUT1 ATIMD3 IMPL1 AK-HSDH AT1G31690 CYP97A3 AT-IE AT1G31920 STRS1 PRK ATPRR1 AT1G32160 ACT1 NRT1.5 AT1G32470 ABCI7 FdC2 AT1G32730 GBSS1 PRPL11 AT1G33110 AT1G33260 AtGXMT1 ATSERK2 AT1G35340 At-FANCM AT1G35560 RPL21C AT1G36280 SHM7 AT1G36390 ATNR2 AT1G41880 GAPB Aty2 ATCAO CP22 ATMCM2 AT1G44920 BGLU1 ATTLL1 Lhca5 CYCA3;2 DYW1 AT1G48100 CIPK17 EMB3105 RKL1 GATB RACK1B AT1G49010 AT1G49380 LACS2 AT1G49580 ATPREP2 AtCXE5 AT1G49740 FTSH1 ATHX POLGAMMA2 GDC1 bHLH115 AT1G51080 AT1G51110 AT1G51340 Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols. 4CL.1 AT1G51805 AT1G52220 PSAH-2 AtPERK15 ABA2 AT1G52510 PLDALPHA2 ATRBL5 SPA4 mMDH1 ATMUM4 PK3AT AT1G54050 AT1G54220 ABCD2 AT1G54500 AtTLP18.3 AT1G54790 AT1G54820 AT1G55140 AT1G55200 AT1G55210 AT1G55260 AGP21 AT1G55360 NDF5 ZKT CPN60B AT1G55690 AT1G55960 HAC04 AT1G56050 AT1G56190 ATNAS4 AT1G56500 AT1G56670 AT1G56720 AtMYB50 AT1G57660 AT1G57770 ATATP-PRT1 AT1G58170 AtHEMA1 ATXYN1 RXW8 ZCF125 CRR28 AT1G59970 EMB3108 AT1G60000 BGLU5 BGLU6 DHNS AT1G60590 ABC4 AT1G61190 AT1G61300 ARP2 AT1G62250 ACO2 FMO FMO AT1G62630 BETA-VPE ATSCO1 AT1G62780 AT1G62950 AT1G63470 ISPF AtGH9C2 REB1 AT1G64500 AT1G64510 BDG1 AT1G64680 NDF2 AMT1;2 RPOD1 AT1G64880 G-TMT 4CL3 AT1G65070 AT1G65190 AT1G65230 ATHEX1 FMO AT1G65870 AT1G66130 AT1G66180 ATGSR2 AtMYB20 AT1G66330 AT1G66430 pde194 AT1G66930 GDPDL1 RBCS1A AT1G67690 PSBY CSK AT1G68240 AT1G68260 AT1G68400 AT1G68440 BBX14 CER6 PSRP3/1 AT1G68600 AT1G68660 PHO1;H1 STN7 PHYLLO FLN2 AT1G69730 AT1G70000 GATL9 AXY4 Encodes a Protease inhibitor/seed storage/LTP family protein AT1G70280 PG2 ATBCA4 AT1G70550 AOAT2 AT1G70600 ABCB26 PGM2 CRR23 ATPIN3 AT1G70985 AtGDPD4 AT1G71480 AT1G71810 ANAC030 AT1G72270 AP40 AT1G72430 HAB1 EDA17 LPA3 AT1G73110 APC13 AT1G73390 ATPIN1 AT1G73600 AT1G73650 ATMPK15 BBX16 ENO1 AT1G74070 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NDH-O RPS9 AT1G75090 AT1G75150 emb2184 AtGH9B7 LQY1 ATCDSP32 PETE1 AMY2 AT1G76450 ACR3 AT1G77090 LACS9 LYM3 AT1G77670 AT1G77750 GNR1 AT1G77940 AT1G78010 AT1G78060 ATGSTU20 SPS1 AT1G78995 AT1G79150 EMB1047 AT1G79630 CS17 AT1G80030 AT1G80640 NIP6 AT1G80850 AT1G80870 APG2 AT2G01210 RPI2 ATPIN4 AHK4 LCR68 ATMEPCT ATWHY3 AT2G02780 ARPN OTP85 AT2G03020 ATEXP15 AT2G03750 AtHsp90.5 AIR3 FLA7 AT2G04790 EMB2761 AT2G05920 MCM5 AT2G13440 AT2G14285 AKN1 AT2G15020 ATHNIR KCS9 BLH7 AT2G17630 AT2G17972 AT2G18890 AT2G19400 ATPRMT1A rps15ab AAS AT2G20450 MEF21 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 XK-1 AT2G21385 AT2G21530 ATRL2 ATRNR1 AT2G21860 AT2G21960 ATIPS2 CYP79B3 IAA8 scpl10 SCPL9 CLF NAPRT2 ATMES7 ACL ATMES3 YCF37 AT2G23690 scpl23 AT2G24020 eIFiso4G2 AT2G24060 PRPL35 PDE319 HHP3 AT2G24170 AT2G24350 AT2G24580 ATWRKY60 AtENODL14 AT2G25220 AT2G25530 AtDBP1 ESE2 AT2G25830 OVA4 PYL2 AtGLDP2 CYP711A1 FDH ARSK1 AT2G26500 CYCB1;4 NPC2 BASS2 ATCDPMEK AGO4 AT2G27060 AT2G27360 AT2G27420 AT2G27680 AT2G27710 ADT3 CH-CPN60A ARF10 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 UXS6 ATRBL1 AT2G29180 AT2G29360 PY ANTR1 AtFAD3 MAPKKK14 PBCP AT2G30320 ATFC-II TCL2 RPT2 AT2G30695 TCP10 FIONA ATERF15 ATCDT1A BBX25 AT2G31670 AT2G31790 MRL7-L CVL1 AT2G32060 ATOFP16 PRORP1 BAM6 ARASP ATCSLB03 ATCSLB04 AT2G32640 ATCB5-B ATSUMO5 ATPDI9 ATCOP1 AtGH9B8 AT2G33180 DAL PRPL28 scpl46 BUBR1 GALS1 AT2G33735 AT2G34460 CYP710A2 AtCCP1 HMR ATHB-14 NF-YA4 EDA3 AT2G35260 GDCH AT2G35410 SKL2 ATERF38 AT2G35760 AT2G35840 NHL12 AT2G36145 RPL24A AT2G36630 DOGT1 AtXTH32 MAT3 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 ADK ATRPS5B UMAMIT12 AT2G37500 AT2G37600 AS1 AT2G37660 AtHBP2 ATCAX1 PDX1L4 TBL34 GAUT7 AT2G38730 AT2G39240 SNZ PGP1 ATRPL23A PnsL1 AT2G39670 RCA LHCB4.3 AT2G40200 AT2G40400 HEME2 ETG1 ARR16 GLY1 ATCAMBP25 AT2G41050 SSL2 ARR8 AT2G41330 NTRC AT2G41890 AT2G42130 AT2G42220 ATPPC2 AT2G42980 NPG1 ATLEUD1 AT2G43560 FAB2 UGT74F1 ATHOL1 AT2G44040 AT2G44230 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 KPHMT1 AT2G46250 SPA1 ATCB5-C PSAP AtCCA1 PHR2 AT3G01060 AtENODL16 AtCGS1 AtSS2 PnsL3 ATCYP38 ATBCA1 LSF1 ATPPT2 AT3G01660 AT3G01810 AK3 scpl25 AT3G02640 EMB2768 ATF1 AT3G02820 PNT1 VTC4 ATGSTF11 AtUGP1 RGL2 NPC4 AT3G03770 ATMS2 GDH3 ATLTL1 emb2458 SDG31 EMB3119 AT3G04840 AT3G05180 ATRAD9 AT3G05560 RPL18 ATSK12 ATSFR2 AT3G06680 TRX AT3G07110 AT3G07270 ATYLMG1-1 AT3G07670 PIP5K6 AT3G08600 AT3G08740 ATERDJ3A AT3G09050 AT3G09200 PTAC13 AT3G09580 LCL5 IDH-VI ADK1 OMR1 AT3G10060 GYRB1 AT3G10310 PAL4 CYP77A6 AT3G10610 GYRA AT3G10760 AT3G10840 LSF2 AtFAD7 ATBSMT1 AT3G11510 CYC2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST AT3G11964 ACT11 AT3G12320 PGK1 AT3G12930 AT3G13000 AT3G13120 AT3G13180 Cpn60beta2 ATKRS-2 AT3G13510 AGP12 AT3G13560 ESM1 AT3G14220 AT3G14330 AT3G14390 HEME1 mMDH2 PRPS20 SPA3 AT3G15460 AT3G15520 ADS3 MFP1 AT3G16080 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. EMB2083 AT3G16370 AAE7 HCF107 RFC3 ECT6 MAT4 CIPK1 HYH AT3G17830 RLK902 DAC WOX1 EMB1270 RACK1C AT3G18280 EMB1865 ATUNG ATPUB29 ATWNK6 AtTic62 AT3G19030 AT3G19100 ATPREP1 AT3G19300 AT3G19370 ATCAD4 AT3G19480 BCAT4 AT3G20010 AT3G20150 AT3G20200 AT3G20260 PSBTN ATPURC AtBBX32 GluTRBP 4CL2 GLTP3 UGT84A2 ABCI12 BBX31 AT3G22150 AT3G22210 ATWNK2 ATTSO1 ELIP ATSR2 AT3G23090 bHLH34 AT3G23390 ATFAO3 AT3G23510 AT3G23530 MED33A XTH16 ATSAHH2 ATTOPII AT3G23930 AT3G23940 ATGR1 AT3G24190 HCF101 PLSP1 AFH1 ATL5 AAPT2 AT3G25660 AT3G25700 AT3G25805 CRF11 RPL15 ATPRX AT3G26085 AT3G26450 ORF02 GAPA AT3G26700 CCB1 DRB3 ATTSO2 GHS1 AT3G27180 AT3G27200 AT3G27540 AT3G27640 EMB3123 RPL12 RPL12-C DEG1 AT3G28040 UMAMIT47 AT3G28760 ATCM1 CHR38 AAO2 LTPG2 ATGSTU27 anac061 AT3G44590 AT3G44620 AT3G44740 ATHD2A RPL9 AtXTH31 AT3G45030 AT3G45430 ATMYB48 PTAC16 DUT1 AT3G47070 PEX11B AT3G47580 AT3G47650 AT3G47830 EDD AT3G48200 AT3G48420 AT3G48425 AT3G48440 AT3G48460 DCF GSA2 AT3G48830 ATBBC1 DMS3 AT3G49640 BAM2 ATBCAT-3 AT3G49810 CRK ICK2 AT3G50685 OEC33 AT3G51140 AT3G51280 IMK2 ATG4 AT3G51950 PSRP2 ATSPP2 CP33 AT3G52740 FTSZ2-2 AT3G52900 ELL1 AT3G52960 CYP97C1 ATPAL2 AT3G53680 ATGCP4 PYRR HCEF1 AT3G54210 TBL36 AT3G54390 AT3G54400 ATGR2 AT3G54750 ATGRXCP GSTL2 PDE329 PPL1 ATTSC13 OVA1 ATDFD SBPASE AT3G56010 UGP3 AT3G56230 AT3G56290 AT3G56300 AT3G56370 AT3G56680 PSRP5 BHLH038 BHLH039 AT3G57010 AT3G57020 AT3G57030 ARR9 BPG2 PrfB3 AT3G57400 NAGK ADSS GIS AT3G58140 IPMI1 GUN4 ATRAD21.2 AT3G59780 AT3G59890 MTHFR1 AT3G60245 CDS5 ATHAM2 AT3G60750 AT3G61080 SDR1 ATPIP1 ARATH;BSAS3;1 AT3G61870 AT3G61950 CYP20-3 UBQ5 CP12 APG3 ATIPT3 CSP41A AtcpRRF PLA OTP86 APG1 EMB3126 AT3G63510 AT3G66652 BRCA2(IV) UNE10 ATHAM3 AT4G00165 ATT1 ANTR2 BAM2 AHDP AT4G00810 AT4G00895 MEE47 AT4G00960 CRK41 TROL GT72B1 HEMG1 ATGPAT3 MCM7 AtGH9B13 AT4G02420 AT4G02530 AT4G02630 EMB3129 AOP AT4G03090 PETC EMB2369 CRK40 APR ATPC1 ATMSRB5 ATKEA3 CLS ORL1 ARGAH2 APX4 ATNDK1 CRRJ ATPD ATSPS4F AT4G10300 AT4G10450 AT4G10600 NDPK3 AT4G11100 AT4G11120 AT4G11175 CRK30 BASS5 AT4G12600 AT4G12830 scpl20 EPFL9 AT4G13170 AT4G13550 CYP83A1 AT4G13840 SHM4 ATSAHH1 The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. AtPRD1 AT4G14200 PDE226 AT4G14360 ATECI3 NF-YB3 AO1 AT4G15000 CYP97B3 AT4G15430 CYP74B2 IAGLU AtCLA1 AT4G15640 AT4G16141 SPK1 ATOPT3 SVR7 AtBAM3 ATNS1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 AT4G17560 LIL3:1 AT4G17740 MYC4 DEG5 AT4G18440 AT4G18460 CH-42 RPL16B AT4G18810 AG AT4G18970 CMT2 PAM68 CYCT1;2 AK-HSDH AT4G19985 PTAC14 GSO1 ATRAB8D AT4G20760 GHR1 PyrD ATRP1 PSBQ AT4G21650 BGLU47 AT4G21770 sks4 BGLU3 APT3 AT4G22730 PGR5-LIKE CCS52A1 AESP CRK17 CRK21 AT4G23670 AtDIR6 AT4G23740 3xHMG-box2 ATCSLG3 AT4G24090 cpHsc70-1 AT4G24350 TAR2 AT4G24750 ATRBP31 AT4G24790 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) AT4G24830 AT4G24930 ACP4 CHLM SKS1 AT4G25290 ATFIB2 B1 AT4G25870 AtFBA7 AT4G26660 AR192 AT4G26830 VTC2 AT4G26860 FAD4 AtENODL2 AT4G27640 AT4G27700 EMB1923 MRL7 PSB28 AT4G28740 AT4G28780 emb2726 AT4G29520 AT4G30020 ATHMA2 AHA2 AT4G30330 AT4G30470 BRS1 AT4G30620 AT4G30800 scpl29 AT4G30825 FAD6 LRL2 AT4G31310 ACDO1 AtENODL15 PGR3 PDE334 ATBT1 Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development. PERK14 ATSDX1 AT4G32915 ATH1 ATCBL10 AtGLDP1 SQD1 AT4G33110 AT4G33400 ATHDA14 AT4G33500 AtHMAC6 AGD2 AT4G33760 AT4G33810 AT4G34090 SEP1 EDA9 ALDH3 CLB6 ATCAP1 AT4G34555 BLH6 SQS2 AT4G34730 ASE2 MRL1 CAT2 HCF244 AT4G35270 XCP1 ATSERAT3;2 AT4G35880 MCA1 AT4G36190 GATA7 ALDH3F1 BGAL3 ROT3 ATRL3 AT4G36640 AtGGPPS11 MAP1D ATHMA1 LBD39 SQE3 XTH7 SHM1 pde191 AT4G38520 ATMYB4 ROC1 BBX19 AtFBA2 AT4G39040 APL3 ATCAD9 SAMC1 AT4G39630 FKBP16-2 ATIPS1 AKN2 AT4G39960 AT4G39970 LAC8 AT5G01075 LAC10 SQD2 AT5G01260 TBL3 ATPDX1 AT5G01590 ATCIPK14 ATOFP1 AT5G01890 STN8 Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ABCI20 AtHsp70-2 AT-HSC70-1 AT5G02610 AT5G02760 LCL1 AT5G02870 AT5G02940 AT5G03140 LAC11 ADK2 AtNCS1 AT5G03620 SBE2.2 PTL 54CP GYRB2 FD-GOGAT AtMC9 ATPAL3 SIR AT5G04840 ATNAS1 AtCHIL EMB2771 AtFAD8 ATEGY2 AT5G05790 UGT76C2 2-Cys AT5G06770 AT5G07020 AT5G07030 AT5G07090 ERL2 ATMSRA2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. SMC6A ATMYB29 ATRPA70B AtGDPD6 AT5G08050 scpl35 HEMC AGAL2 PDE340 ATFLS1 AT5G08650 AT5G09240 AtPPa6 PMDH2 AT5G09800 CESA5 AT5G10020 ATMIPS3 AT5G10605 AT5G10620 AT5G10690 AT5G10770 AT5G10920 CIPK5 APT5 HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 TINY2 AT5G12110 ATTERC Encodes a protein with similarity to REN1, a Rho GTPase activating protein. DiT1 ATGSL12 ABAP1 ATCYP20-2 AT5G13140 EMB3136 ABAR SVR3 ATCHS CARAB-AK-LYS ATIMD1 AT5G14210 AT5G14650 ATDEF2 AO AT-P5C1 AT5G15050 AtENODL17 APG6 GAUT14 AtbZIP3 ATCOL1 AT5G15910 AT5G16130 ATF2 AtMYB43 DHAR3 EMB2247 UGT78D2 AT5G17160 ENH1 PSY RVE1 AtUGP2 AT5G17350 AT5G17660 AT5G17670 EMB1241 PSRP6 encodes an adenylyltransferase ATOBGC PCB2 BAM9 AGP25 EMB3013 ADG2 AT5G19240 AT5G19730 AT5G19760 AtHBP5 ATMGD2 ATBRXL4 ATGER3 AT5G20700 ATCPN21 CRR42 AT5G21060 AT5G21100 AT5G21222 ATCKX5 AT5G22340 anac090 AT5G22440 EMB1030 IMS3 IMS2 CaS HCF136 AT5G23480 ATSIG5 SQE5 AT5G24155 ATSS1 PGL5 LSU2 AT5G24760 CRY3 ESE3 AT5G25590 tny AT5G26010 AT5G26330 SHM2 AT5G27240 AT5G27390 MK AT5G27560 AT5G28500 BIP1 ARRPS1 AT5G35170 AMOS1 ATGSL1 G6PD1 AT5G35970 atylmg3 DEG10 ARF8 CIR1 AT5G37790 ASF1B RBCS3B RBCS2B RBCS1B AT5G38510 AT5G38520 APE1 CRR7 CDF2 OLI7 DEG8 AT5G40060 CRK42 UPM1 RPL27 DRB5 RPS10B AT5G41760 BIP AT5G42070 ATBG_PPAP scpl42 ARC6 ATS AT5G42720 CYCA3;1 AT5G43150 NF-YC13 TZP NDH18 KCS20 SDG18 ABCI21 AT5G44520 AT5G44530 MCM6 AT5G44680 AT5G45280 ATFKBP13 AT5G45720 AT5G45775 CHL AT5G45950 AT5G45960 AT5G46220 MCM3 AT5G46390 BSK2 AT5G46580 bHLH071 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. LIL3:2 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT5G47620 NF-YB2 AMK2 AT5G47970 GFA2 ADG1 AT5G48360 HINT3 AT5G48740 AT5G48790 ATPTS LPA66 HCT ATPRMT4A OVA2 AT5G49215 ATMYB111 MMT cpHsc70-2 AT5G50100 AT5G50110 AtPIMT2 CP31B FSD2 AT5G51110 AT5G51310 ATTPPA AT5G51560 At-NEET ATPGMP AT5G52010 OVA6 B2 AT5G52780 AT5G52950 AT5G52970 AT5G53070 TRY ATPMEPCRF AtPLR1 AT5G53920 ATOMT1 PTAC15 THE1 AHL CRLK1 RPL24 ANK AT5G55220 ATFTSZ1-1 GDPDL4 AT5G55520 CRR21 AtHsp90.2 AT5G56040 AT5G56840 AT5G56850 AT5G56890 LUT2 AT5G57610 CER3 APO2 NPL1 NdhN AT5G58330 AT5G58480 DDB2 AtcPT4 ftsh9 AT5G59130 AT5G59500 AT5G59600 AT5G59610 AT5G59740 AtRIBA3 AT5G59850 ATLAC17 AT5G60130 CLB4 AT5G60670 ATMYB34 ATRPA70D PDCB1 AT5G61170 AT5G61350 EMB2728 AtMYB28 AT5G61570 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ATCNX1 AGL42 ATGT18 ANAC101 CDF1 AHA11 DXR AT5G62840 ARR6 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. ATRMI1 GSA1 AT5G63700 ATERS DCT ATGCH EMB3144 AT5G64850 ASN2 ANNAT2 BAM1 XTH6 ATLFNR1 AT5G66230 AT5G66470 AT5G66520 ATDDM1 AT5G66770 ABA1 ICU2 EPS1 AT5G67200 RLK MATK
GO:0044699 single-organism process	BP	3.245e-94	LHY AT1G01080 KCS1 CYP78A8 ATRAB-A3 ATGPAT4 ATKEA1 CER1 ATGPAT2 GATL5 ATCSLD5 LPA1 ATWEE1 AT1G03020 AtD27 AtBE2 POR ATBARD1 AT1G04040 SDG13 ATXIB KCS2 AXR3 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase AT1G04420 BDL LIP2 AT1G04680 KAT1 CTF18 ATPDI10 emb2394 LPA19 UGT1 BT3 ATNTH2 AT1G06250 AT1G06360 AT1G06550 AT1G06690 CCR2 AT1G06830 AtSLP1 ATNDI1 EMB2784 ATPCNA1 MT1C AT1G07700 KCS3 ATLIG1 ATVAM2 ADT6 AT1G08280 ABC1 CJD1 emb2411 BIP3 AT1G09310 CRB AT1G09390 AT1G09440 similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase iPGAM1 ATGSTU18 ATGSTU17 emb2004 AT1G10585 AT1G10740 Z-ISO AT1G10850 AT1G10900 ATRECQ4A ATFD1 SCM AT1G11300 AT1G11410 AT1G11670 ATSS3 ADT1 ATGLX1 AT1G11860 ATSRS ATNRT1 FMO AT1G12244 PHR1 AT1G12460 AT1G12500 HPR3 AT1G12800 GAPA-2 CYP71B2 AT1G13650 AT1G13730 LSMT-L PnsL2 AT1G14270 AT1G14345 AtMYB124 ATWHY1 ATLPP2 AT1G15140 AT1G15160 AT1G15410 ATGA3OX1 CYCA2;3 AT1G15710 CP24 ATNRAMP6 AT1G15970 NDF1 AT1G16080 CYCB3;1 ATOCT3 CYP79F2 BUS1 HCF173 UP6 ACR11 SPS2 AtHBP1 ICR1 FUG1 GLYR2 ABCG11 AT1G18060 AT1G18090 ATLP-1 ATNACK1 AT1G18440 ATSOT17 NDF6 AT1G19140 LHCA2*1 BES1 AT1G19450 JMT ATCLH1 APS2 AT1G19970 ATLFNR2 DRT112 AT1G20950 AT1G21350 SECA2 ATOGG1 LYM1 ATPIP5K1 AT1G22630 AT1G22850 AST91 AT1G23410 AOR GATL8 G6PD3 Cpn60beta4 AT-EXP10 RNS3 AT1G27120 SPL11 AT1G27480 ABCB13 LTPG1 AT1G28395 AT1G28530 SRD2 AT1G28570 AT1G28610 AT1G28660 ARAB-1 ATSCAR3 UNE1 SAUR63 AT1G29660 AT1G29700 PSAK AAE14 UGT78D1 GlcNAc1pUT1 ATIMD3 IMPL1 AK-HSDH AT1G31690 CYP97A3 AT-IE AT1G31920 PRK AtLrgB ATPRR1 AT1G32160 ACT1 AT1G32220 NRT1.5 AT1G32470 ABCI7 FdC2 AT1G32730 AT1G32780 GBSS1 PRPL11 AT1G33110 AtGXMT1 OHP2 SAMC2 ATSERK2 At-FANCM AT1G35560 RPL21C AT1G36280 SHM7 AT1G36390 ATNR2 SKS6 GAPB Aty2 AAP5 ATCAO CP22 ATMCM2 AT1G44920 ATTLL1 Lhca5 AtRLP6 AT1G45688 CYCA3;2 AT1G47370 mtLPD1 CIPK17 EMB3105 RKL1 GATB RACK1B AT1G49380 LACS2 AT1G49580 AtCXE5 AT1G49740 FTSH1 ATHX AT1G50450 GDC1 bHLH115 AT1G51110 AT1G51340 Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols. 4CL.1 AT1G52220 PSAH-2 AtPERK15 ABA2 PLDALPHA2 SPA4 mMDH1 TTL1 ATMUM4 ATGSTU28 PK3AT AT1G54220 ABCD2 AT1G54500 AtTLP18.3 AT1G54790 AT1G55210 AT1G55260 AGP21 AT1G55360 NDF5 AT1G55380 ZKT CPN60B AT1G55690 ZIP11 AT1G55960 AT1G56050 AT1G56190 ATNAS4 AT1G56500 ADR2 SVB AT1G56670 AtMYB50 AT1G57770 ATATP-PRT1 AT1G58170 AtHEMA1 ATXYN1 RXW8 ZCF125 EMB3108 AT1G60000 DHNS ABC4 ATFD2 ARP2 AT1G62030 APR2 AT1G62250 ACO2 FMO FMO ATSCO1 AT1G62780 AT1G62950 AT1G63470 AT1G63520 MDAR6 ISPF AT1G64150 REB1 AT1G64500 AT1G64510 BDG1 NDF2 AMT1;2 RPOD1 AT1G64880 CYP89 G-TMT CDI Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication). 4CL3 AT1G65070 AT1G65230 FMO AT1G65870 AT1G66130 AT1G66180 ATGSR2 AT1G66330 AT1G66430 pde194 AT1G66540 GDPDL1 RBCS1A AT1G67180 AT1G67690 PSBY CSK AT1G68240 AT1G68260 AT1G68400 AT1G68440 BBX14 CER6 AT1G68570 PSRP3/1 AT1G68600 PHO1;H1 AT1G68780 STN7 PHYLLO FLN2 AT1G69420 AT-EXP1 GATL9 AXY4 AT1G70280 PG2 ATBCA4 AT1G70550 AOAT2 ABCB26 PGM2 CRR23 CLE17 ATPIN3 AT1G70985 AtGDPD4 AtRLP11 AT1G71480 AT1G71500 ATSUC5 ANAC030 ABCG25 AT1G72130 AT1G72270 AERO1 AP40 AT1G72430 ATEXO70D1 ATGER1 HAB1 EDA17 LPA3 AT1G73110 APC13 ATPIN1 AT1G73600 AT1G73650 ATMPK15 AT1G73700 BBX16 ENO1 AT1G74070 ATSOT18 TRM4 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G74730 AT1G74870 NDH-O AT1G75090 JAC1 RRA2 RRA1 AT1G75150 emb2184 AtGH9B7 LQY1 ATCDSP32 PETE1 AMY2 AT1G76450 AT1G76530 ACR3 AT1G77090 TAPX LACS9 AT1G77670 GNR1 AT1G78010 AT1G78060 AUF1 AT1G78180 ATGSTU23 ATGSTU20 SPS1 AT1G78995 BRG2 AT1G79150 AtOCT5 EMB1047 CS17 AT1G80030 NIP6 AT1G80850 APG2 AT2G01210 RPI2 ATPIN4 CLE16 CRR3 AHK4 ATPAP8 AtPTR4 LCR68 ATMEPCT ATWHY3 AT2G02780 ARPN ATEXP15 AtHsp90.5 ZIP7 AIR3 FLA7 AT2G04790 EMB2761 PGR5 AT2G05920 ABCC13 MCM5 AT2G10940 AT2G13440 AKN1 AT2G15020 LTP AtTic21 ATHNIR KCS9 AT2G17630 ARAC1 AT2G18860 TXND9 AT2G19650 ATPRMT1A PLA2-BETA AT2G19780 ATXIG AAS A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. AT2G20710 ATEXPB1 PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 AT2G21340 XK-1 AT2G21385 AT2G21530 ATRL2 ATRNR1 AT2G21830 AT2G21860 AT2G21960 ATIPS2 CYP79B3 AT2G22420 AGP2 IAA8 CLF NAPRT2 ATMES7 ACL ATMES3 YCF37 AT2G24020 eIFiso4G2 AT2G24060 PRPL35 HHP3 SDR2 AT2G24580 AtGDU4 AtTic55 ATWRKY60 AtENODL14 AT2G25270 AT2G25530 MOT1 AT2G25830 OVA4 PYL2 AtGLDP2 CYP711A1 FDH ARSK1 CYCB1;4 SCAB1 NPC2 BASS2 ATCDPMEK AGO4 AT2G27060 AT2G27130 AT2G27360 AT2G27680 ADT3 CH-CPN60A ACA2 ARF10 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 UXS6 ATEXP6 AT2G29180 PY ANTR1 AtFAD3 MAPKKK14 ATKT1 PBCP ATFC-II TCL2 AT2G30460 RPT2 AT2G30540 AT2G30695 TCP10 FIONA ATERF15 ATCDT1A BBX25 AT2G31670 AT2G31790 ATCHX21 CVL1 PRORP1 BAM6 ATGLR3.7 ATCSLB03 ATCSLB04 AT2G32640 ATCB5-B ATSUMO5 ATPDI9 ATCOP1 AT2G33180 AT2G33255 DAL PRPL28 BUBR1 GALS1 AT2G34060 ATRANGAP2 AT2G34460 CYP710A2 HMR ABCC2 ATHB-14 NF-YA4 EDA3 CLE42 CAT5 ATNPSN11 AT2G35260 GDCH AT2G35410 SKL2 AT2G35760 AT2G35840 NHL12 AT2G36145 DOGT1 MAT3 ABCB1 AT2G36970 ATSIG6 ATPAL1 RIP2 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 ADK UMAMIT12 AT2G37500 AS1 ATEXP3 AT2G37660 AKR4C9 LCD1 AT2G37870 AT2G37900 AtHBP2 ATCAX1 PDX1L4 PYL4 TBL34 AT2G38380 GAUT7 SNZ PGP1 PnsL1 AT2G39670 RCA AT2G40400 AT2G40460 HEME2 ETG1 ATEXP8 ARR16 GLY1 ATCAMBP25 AT2G41050 AT2G41090 AT2G41250 SSL2 ARR8 AT2G41330 NTRC EMB2654 AT2G41890 AT2G42130 AT2G42220 ATPPC2 NPG1 ATLEUD1 AT2G43240 AT2G43560 FAB2 UGT74F1 ATHOL1 AT2G44040 AT2G44300 CHL-CPN10 AT2G44920 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 AGP8 KPHMT1 ABIL1 SPA1 ATCNGC12 ATCB5-C CYP78A6 PSAP AtCCA1 AtBOR1 ATNDT1 AT2G47500 PHR2 ABCC4 RPH1 AT3G01060 AtCGS1 AtSS2 PnsL3 ATCYP38 ATBCA1 LSF1 ATPPT2 AT3G01660 AT3G01810 AK3 ATCOL2 AT3G02640 EMB2768 ATF1 AT3G02820 VTC4 ATGSTF11 AtUGP1 RGL2 NPC4 AT3G03770 ATMS2 GDH3 AT3G04210 ATLTL1 emb2458 SDG31 AT3G04760 EMB3119 AT3G04840 AT3G05180 AtRLP31 AT3G05470 ATRAD9 RPL18 ATSK12 FAF4 AT3G06035 ATSFR2 TRX AT3G07270 ATYLMG1-1 AT3G07670 PIP5K6 AT3G08600 AT3G08740 LTP6 ATERDJ3A AT3G09050 PTAC13 ATEXO70H4 AT3G09580 LCL5 IDH-VI ADK1 OMR1 AT3G10060 ATPAP16 GYRB1 AT3G10310 PAL4 CYP77A6 CAT7 AT3G10610 GYRA LSF2 AtFAD7 ATBSMT1 CYC2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST AT3G11964 ACT11 FLOR1 AT3G12320 SULTR4;2 DRT100 PGK1 AT3G12930 AT3G13120 AT3G13180 Cpn60beta2 ATKRS-2 AT3G13510 AGP12 ESM1 AT3G14220 AT3G14380 AT3G14390 CYP72A11 HEME1 mMDH2 AT3G15090 PRPS20 AT3G15460 AT3G15520 ADS3 SULTR3;4 MFP1 NDF4 EMB2083 AT3G16370 AAE7 HCF107 RFC3 ECT6 MAT4 CIPK1 HYH AT3G17640 RLK902 DAC WOX1 EMB1270 RACK1C AT3G18280 EMB1865 ATUNG BRU1 AtTic62 AT3G19030 ATPREP1 AT3G19370 ATCAD4 AT3G19480 BCAT4 AT3G20010 CYP705A19 AT3G20150 AT3G20260 AT3G20790 ATPURC AtBBX32 GluTRBP 4CL2 ABCC8 GLTP3 AT3G21390 AT3G21460 UGT84A2 ABCI12 AT3G21670 AT3G21690 AT3G22210 ATWNK2 SOL1 ATTSO1 AT3G22810 ELIP ATSR2 AT3G23090 AtRLP37 bHLH34 ATFAO3 AT3G23510 AT3G23530 MED33A RALFL24 ATSAHH2 ATTOPII AT3G23940 ATGR1 HCF101 PLSP1 CLE41 AT3G25410 AFH1 ATL5 AAPT2 AT3G25660 AT3G25805 CLE27 ATPRX CYP86C2 CYP71B22 CYP71B35 CYP71B36 AT3G26450 ORF02 AT3G26590 GAPA CCB1 DRB3 ATTSO2 ATCLC-B AT3G27200 AT3G27510 AT3G27540 DEG1 KLCR2 AT3G28040 UMAMIT47 ABCB15 AT3G28760 ATEXP5 ATCM1 emb2076 CHR38 AAO2 AT3G43610 LTPG2 ATGSTU27 anac061 AtKIN14h AT3G44740 ATHD2A RPL9 AT3G46490 FLA4 MAR1 PTAC16 COPT2 DUT1 AT3G47070 AtG3Pp1 PEX11B AT3G47580 AT3G47650 AT3G47830 GTR1 EDD AT3G48200 CYP71A25 CYP71A24 CYP71A21 AT3G48420 AT3G48425 AT3G48460 DCF GSA2 AtSWEET11 EMB2261 AT3G49220 DMS3 AT3G49640 BAM2 ATBCAT-3 CRK ICK2 AT3G50685 OEC33 AT3G51140 AT3G51280 TMT3 IMK2 ATG4 AST12 PSRP2 AT3G52170 ATSPP2 CP33 ACA1 FTSZ2-2 AT3G52900 ELL1 CYP97C1 ATPAL2 MIDD1 ATGCP4 PYRR HCEF1 AT3G54210 AT3G54400 ATGR2 AT3G54750 AT3G54830 ATGRXCP AT3G54930 GSTL2 ABCG18 ABCG19 PDE329 PPL1 ATTSC13 OVA1 AT3G55420 ATDFD SBPASE AT3G56010 UGP3 AT3G56160 Encodes a putative amino acid transporter. AT3G56230 AT3G56290 AT3G56300 AT3G56370 PPD6 AT3G56680 PSRP5 BHLH038 BHLH039 AT3G57010 ARR9 BPG2 PrfB3 NAGK ADSS GIS AT3G58140 IPMI1 ABCC10 GUN4 ATRAD21.2 AT3G59780 AT3G59890 MTHFR1 AT3G60070 CDS5 ATHAM2 AT3G60750 AT3G61080 SDR1 ATPIP1 ARATH;BSAS3;1 AT3G61870 CYP20-3 CP12 APG3 ATIPT3 CSP41A AtcpRRF PLA APG1 EMB3126 AT3G63510 AT3G66652 BRCA2(IV) UNE10 ATHAM3 AT4G00165 ATT1 ANTR2 PIP1;4 BAM2 AHDP AT4G00895 MEE47 TROL GT72B1 HEMG1 ATGPAT3 MCM7 AT4G02530 EMB3129 AT4G02850 AOP PETC FIB EMB2369 APR ATPC1 AT4G04750 ATMSRB5 ATMSRB6 ATKEA3 CLS ATENT6 SAPX ARGAH2 APX4 ATNDK1 ATPD ATSPS4F AT4G10300 ATOPT7 NDPK3 AT4G11100 AT4G11175 AT4G11290 BASS5 CYP706A6 PME1 AT4G12600 AtENODL19 EPFL9 AT4G12980 AT4G13550 CYP83A1 AT4G13840 SHM4 ATSAHH1 The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. AtPRD1 AT4G14200 PDE226 AT4G14360 ACD6 ATECI3 ATCFM3B AO1 CYP97B3 ABCG41 AT4G15430 CYP74B2 IAGLU AtCLA1 AT4G15660 AT4G15670 AT4G15680 RALFL33 AtSWEET17 AT4G16155 SPK1 ATOPT3 SVR7 AT4G16980 AT-EXPR AtBAM3 ATNS1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 AT4G17560 LIL3:1 AT4G17740 MYC4 AT4G18440 AT4G18460 CH-42 RPL16B DOT4 AtRLP51 AT4G18810 AG AT4G18970 AT4G19380 CYCT1;2 AK-HSDH AT4G19985 PTAC14 GSO1 ATRAB8D AT4G20760 AT4G20840 GHR1 PyrD ATRP1 PSBQ AT4G21910 APR3 sks4 APT3 AT4G22730 PGR5-LIKE CCS52A1 AESP CRK17 AT4G23670 AtDIR6 AT4G23740 3xHMG-box2 ARC1 ATCSLG3 AT4G24090 AT4G24170 cpHsc70-1 AT4G24350 CLT2 TAR2 AT4G24750 ATRBP31 AT4G24780 AT4G24830 AT4G24930 TPD1 ACP4 CHLM SKS1 AT4G25290 ATFIB2 B1 AT4G25830 AT4G25870 ABCB2 AtFBA7 AT4G26660 AR192 VTC2 AT4G26860 FAD4 AT4G27360 AtENODL2 AT4G27640 AT4G27700 CYP709B3 AT4G28010 EMB1923 ATEXPB3 PSB28 AMT1;4 GrxC5 AT4G28740 AT4G28780 emb2726 ADS1 AT4G30020 ATHMA2 AHA2 AT4G30470 BRS1 AT4G30620 AT4G30800 scpl29 FAD6 LRL2 AT4G31310 ACDO1 AtENODL15 PGR3 ATGPX7 PDE334 ATBT1 Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development. ATSDX1 ATH1 ATCBL10 AtGLDP1 SQD1 AT4G33040 AT4G33110 AT4G33400 ATHDA14 AT4G33500 AtHMAC6 AT4G33550 AT4G33560 AGD2 AT4G33760 CER4 AT4G34090 SEP1 EDA9 ALDH3 CLB6 ATCAP1 BLH6 SQS2 AT4G34730 ASE2 MRL1 HIPP25 CAT2 HCF244 ATGLR3.2 XCP1 ATSERAT3;2 MCA1 ALDH3F1 BGAL3 ROT3 AT4G36640 AtGGPPS11 CBSX1 MAP1D ATHMA1 AT4G37295 CYP81D5 LBD39 SQE3 XTH7 NDH-M SHM1 pde191 sks9 ATMYB4 AT4G38660 ROC1 AT4G38950 AtFBA2 AT4G39040 APL3 ATCAD9 SAMC1 CYP96A12 ATPPR5 AT4G39630 ATIPS1 AKN2 AT4G39970 AT4G40000 LAC8 LAC10 SQD2 AT5G01260 TBL3 ATPDX1 AT5G01590 ATRAPTOR1A ATCIPK14 ATOFP1 AT5G01890 OHP Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ABCI20 AtHsp70-2 AT-HSC70-1 LCL1 AT5G02870 AT5G02940 LAC11 ADK2 AtNCS1 SBE2.2 TRM28 PTL ATCSLA09 EMB166 54CP GYRB2 FD-GOGAT AT5G04160 ATPAL3 SIR ATNAS1 AtCHIL EMB2771 AtFAD8 ATEGY2 UGT76C2 AT5G05960 2-Cys ABCG22 AT5G07020 AT5G07090 ERL2 APC3 ATMSRA2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. SMC6A ATMYB29 AT5G07800 ATRPA70B AtGDPD6 AT5G08050 HEMC AGAL2 PDE340 ATFLS1 AT5G08650 NDC1 AtPPa6 PMDH2 AT5G09760 CESA5 AT5G10020 ATMIPS3 DOT3 AtRABH1e KAC1 AT5G10690 AT5G10920 CIPK5 APT5 HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 NDL2 ATMSL10 AT5G12110 ATTERC Encodes a protein with similarity to REN1, a Rho GTPase activating protein. DiT1 ATGSL12 ABAP1 ATCYP20-2 AT5G13140 AT5G13400 EMB3136 ABAR ATCHS CARAB-AK-LYS ATIMD1 AT5G14210 ATDEF2 AO AT-P5C1 AT5G15050 AtENODL17 GAUT14 AtbZIP3 ATCOL1 AT5G15910 ATF2 AtMYB43 DHAR3 EMB2247 AT5G17000 AT5G17010 UGT78D2 AT5G17160 ENH1 PSY RVE1 AtUGP2 AT5G17630 AT5G17670 AT5G17700 EMB1241 encodes an adenylyltransferase ATOBGC PCB2 BAM9 AGP25 EMB3013 ADG2 AT5G19240 AT5G19500 SULTR3;5 ATOEP80 AT5G19760 AT5G19970 AtHBP5 PHT4;5 ATMGD2 ATGER3 AT5G20700 ATCPN21 AT5G21060 AT5G21100 ATCKX5 AT5G22340 anac090 emb1211 EMB1030 H2B IMS3 IMS2 CaS HCF136 FSD3 AT5G23480 ARC11 ATSIG5 SQE5 AT5G24155 ATSS1 PGL5 AT5G24760 CRY3 CYP71B12 ESE3 AT5G25590 tny AT5G26010 AT5G26200 AT5G26330 AtRH3 SHM2 ATIREG3 AT5G27290 SFP2 AT5G27390 MK AT5G27560 AT5G28500 BIP1 AT5G28750 ARRPS1 AT5G35170 AMOS1 ATGSL1 G6PD1 AT5G35970 atylmg3 ARF8 CIR1 WSD1 CML24 ASF1B RBCS3B RBCS2B RBCS1B AT5G38520 APE1 CRR7 EMB2745 OLI7 DEG8 AT5G40150 EMB139 UPM1 DRB5 RPS10B AT5G41760 BIP AT5G42070 ATBG_PPAP ATS WPP1 CYCA3;1 AT5G43150 TZP NDH18 KCS20 AT5G43870 SDG18 AT5G44050 ABCI21 AT5G44390 AT5G44400 AT5G44410 TAO1 AT5G44520 MCM6 AT5G44680 AT5G45060 AtPP2-A6 AT5G45280 ATFKBP13 AtRLP55 CHL AT5G45950 AT5G45960 AT5G46220 AT5G46270 MCM3 AT5G46390 AT5G46450 BSK2 AT5G46580 TET1 PYL1 BOU Encodes the mitochondrial ATP synthase subunit delta. LIL3:2 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AMK2 AT5G47970 GFA2 ADG1 AT5G48360 AT5G48490 HINT3 AT5G48740 ATPTS ATSDI1 LPA66 HCT ATPRMT4A OVA2 ATMYB111 ATFRO6 ATFRO7 MMT cpHsc70-2 AT5G50100 CP31B EMB1006 AT5G50420 AT5G50740 ATRBOHC FSD2 AT5G51110 AT5G51310 ATTPPA AT5G51560 At-NEET ATPGMP encodes peroxidase involved in the lignification of tracheary elements (TE) in roots CYP96A4 OVA6 B2 AT5G52780 AT5G52950 AT5G52970 TRY ATPMEPCRF AT5G53500 AtPLR1 ATMLO11 AT5G53900 AT5G53920 ATOMT1 PTAC15 THE1 AHL RPL24 ANK ATK3 AT5G55220 ATFTSZ1-1 GDPDL4 AT5G55520 AT5G55580 FLA1 CRR21 AtHsp90.2 AT5G56040 ATEXP14 AtGulLO4 PFN3 LUT2 AT5G57170 AT5G57345 CER3 APO2 NPL1 AT5G58160 NdhN AT5G58330 AT5G58390 AT5G58480 DDB2 AtcPT4 AT5G59250 LTP4 LTP3 WOX2 AT5G59480 AtZIP2 AT5G59600 AT5G59740 AtRIBA3 HTA6 ULI3 ATLAC17 CLB4 ATMYB34 PDCB1 EMB2728 AtMYB28 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AGL42 ATGT18 ANAC101 CDF1 AHA11 AT5G62730 DXR AT5G62840 AT5G62890 ARR6 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. ATFP3 ATRMI1 GSA1 AT5G63700 ATERS AtXYP1 DiT2.2 DCT ATGCH EMB3144 AT5G64850 AT5G64970 ASN2 ANNAT2 BAM1 AT5G65840 AT5G65990 ATLFNR1 AT5G66230 AT5G66310 AT5G66470 AT5G66740 ATDDM1 ABA1 RALFL34 ICU2 EPS1 AT5G67200 RLK
GO:0043436 oxoacid metabolic process	BP	7.022e-90	AT1G01080 KCS1 ATGPAT4 AtBE2 POR KCS2 AT1G04420 LIP2 KAT1 emb2394 UGT1 AT1G06550 EMB2784 KCS3 ADT6 ABC1 CJD1 AT1G09310 CRB ATFD1 ADT1 ATGLX1 AT1G11860 ATSRS ATNRT1 AT1G12800 GAPA-2 AT1G13650 LSMT-L AT1G14270 AT1G14345 AT1G15410 ATGA3OX1 AT1G15710 CP24 CYP79F2 BUS1 UP6 AtHBP1 FUG1 ATSOT17 LHCA2*1 JMT ATLFNR2 DRT112 AT1G20950 AOR Cpn60beta4 PSAK ATIMD3 IMPL1 AK-HSDH CYP97A3 AT-IE PRK ACT1 AT1G32470 ABCI7 FdC2 PRPL11 AT1G33110 SHM7 ATNR2 GAPB ATCAO CP22 AT1G44920 GATB AT1G49380 LACS2 GDC1 bHLH115 AT1G51110 AT1G51340 PSAH-2 ABA2 mMDH1 AT1G54220 ABCD2 AtTLP18.3 AT1G55260 AGP21 AT1G55360 AT1G56190 ATNAS4 AT1G56500 ATATP-PRT1 AT1G60000 ABC4 ACO2 FMO FMO AT1G62780 ISPF BDG1 AT1G65230 FMO ATGSR2 AT1G66430 AT1G67690 PSBY AT1G68240 AT1G68260 CER6 PSRP3/1 PHYLLO AT1G70280 ATBCA4 AOAT2 AP40 EDA17 LPA3 ENO1 AT1G74070 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. emb2184 PETE1 ACR3 AT1G77090 LACS9 AT1G77670 GNR1 ATGSTU20 LCR68 ATMEPCT AIR3 EMB2761 AT2G05920 AKN1 ATHNIR KCS9 AT2G17630 AAS PSB29 PDTPI ATSULA AtFBA1 AT2G21385 CYP79B3 ATMES7 ACL ATMES3 YCF37 AT2G24020 AT2G24060 AT2G24580 ATWRKY60 AT2G25530 AT2G25830 OVA4 PYL2 AtGLDP2 FDH BASS2 ATCDPMEK AT2G27680 ADT3 PY ANTR1 AtFAD3 ATFC-II RPT2 AT2G30695 FIONA AT2G31670 AT2G31790 AT2G33180 PRPL28 EDA3 AT2G35260 GDCH AT2G35410 SKL2 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ADK UMAMIT12 AT2G37500 AT2G37660 ATCAX1 PGP1 PnsL1 RCA ATCAMBP25 NTRC AT2G42130 AT2G42220 ATPPC2 ATLEUD1 AT2G43560 FAB2 UGT74F1 ATHOL1 AT2G44040 CHL-CPN10 AT2G44920 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 ATCB5-C PHR2 AtCGS1 ATCYP38 ATBCA1 AK3 EMB2768 ATF1 VTC4 ATGSTF11 RGL2 ATMS2 GDH3 EMB3119 ATSFR2 AT3G07270 AT3G07670 ATERDJ3A PTAC13 IDH-VI ADK1 OMR1 PAL4 AtFAD7 ATBSMT1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ATKRS-2 ESM1 AT3G14390 HEME1 mMDH2 AT3G15520 ADS3 MFP1 NDF4 AT3G16370 AAE7 RFC3 ECT6 MAT4 EMB1865 AT3G19030 AT3G19480 BCAT4 ATSAHH2 AT3G23940 HCF101 PLSP1 AT3G25805 ATPRX AT3G26450 GAPA CCB1 DEG1 UMAMIT47 ATCM1 AAO2 LTPG2 AT3G44740 RPL9 PTAC16 AT3G47650 EDD DCF GSA2 ATBCAT-3 AT3G50685 OEC33 AT3G51140 ATG4 PSRP2 CP33 FTSZ2-2 CYP97C1 ATPAL2 AT3G54210 AT3G54400 ATGRXCP OVA1 ATDFD SBPASE AT3G56010 AT3G56300 NAGK AT3G58140 IPMI1 GUN4 AT3G59780 AT3G59890 MTHFR1 AT3G60750 ATPIP1 ARATH;BSAS3;1 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 AT3G63510 ATT1 TROL AT4G02530 EMB3129 AOP PETC EMB2369 APR ATPC1 ATMSRB5 ARGAH2 APX4 ATPD AT4G10300 BASS5 CYP83A1 AT4G13840 SHM4 ATSAHH1 ATECI3 CYP97B3 CYP74B2 IAGLU AtCLA1 ATNS1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17560 LIL3:1 AT4G18460 CH-42 AK-HSDH ATRAB8D ATRP1 AT4G23670 TAR2 AT4G24750 ATRBP31 AT4G24830 AT4G24930 ACP4 CHLM B1 AtFBA7 VTC2 FAD4 AtENODL2 PSB28 emb2726 AT4G30020 AT4G30620 FAD6 PGR3 PDE334 ATSDX1 ATH1 AtGLDP1 SQD1 ATHDA14 AGD2 AT4G33760 AT4G34090 SEP1 EDA9 CLB6 MRL1 HCF244 ATSERAT3;2 MCA1 AtGGPPS11 XTH7 SHM1 ROC1 AtFBA2 AT4G39040 ATIPS1 AKN2 AT4G39970 SQD2 ATPDX1 AtHsp70-2 AT-HSC70-1 SBE2.2 54CP FD-GOGAT ATPAL3 SIR ATNAS1 AtFAD8 ATEGY2 2-Cys ERL2 ATMYB29 HEMC AT5G08650 AtPPa6 PMDH2 AT5G10690 AT5G10920 PPD5 DiT1 ATCYP20-2 AT5G13140 CARAB-AK-LYS ATIMD1 ATDEF2 AT-P5C1 EMB2247 PSY PCB2 AGP25 AT5G19240 AT5G19760 ATMGD2 ATCPN21 AT5G21060 AT5G22340 EMB1030 IMS3 IMS2 CaS SHM2 ARRPS1 ATGSL1 G6PD1 AT5G38520 OLI7 DEG8 UPM1 AT5G41760 NDH18 KCS20 AT5G44520 ATFKBP13 CHL AT5G45950 AT5G46580 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. LIL3:2 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT5G47970 ADG1 OVA2 CP31B AT5G51110 AT5G51310 ATPGMP OVA6 B2 AT5G52970 AtPLR1 RPL24 ANK AT5G55220 CER3 APO2 NPL1 AT5G58330 CLB4 ATMYB34 PDCB1 AtMYB28 DXR ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. GSA1 ATERS DCT ASN2 ATLFNR1 AT5G66470 ABA1 EPS1
GO:0006082 organic acid metabolic process	BP	1.048e-89	AT1G01080 KCS1 ATGPAT4 AtBE2 POR KCS2 AT1G04420 LIP2 KAT1 emb2394 UGT1 AT1G06550 EMB2784 KCS3 ADT6 ABC1 CJD1 AT1G09310 CRB ATFD1 ADT1 ATGLX1 AT1G11860 ATSRS ATNRT1 AT1G12800 GAPA-2 AT1G13650 LSMT-L AT1G14270 AT1G14345 AT1G15410 ATGA3OX1 AT1G15710 CP24 CYP79F2 BUS1 UP6 AtHBP1 FUG1 ATSOT17 LHCA2*1 JMT ATLFNR2 DRT112 AT1G20950 AOR Cpn60beta4 PSAK ATIMD3 IMPL1 AK-HSDH CYP97A3 AT-IE PRK ACT1 AT1G32470 ABCI7 FdC2 PRPL11 AT1G33110 SHM7 ATNR2 GAPB ATCAO CP22 AT1G44920 GATB AT1G49380 LACS2 GDC1 bHLH115 AT1G51110 AT1G51340 PSAH-2 ABA2 mMDH1 AT1G54220 ABCD2 AtTLP18.3 AT1G55260 AGP21 AT1G55360 AT1G56190 ATNAS4 AT1G56500 ATATP-PRT1 AT1G60000 ABC4 ACO2 FMO FMO AT1G62780 ISPF BDG1 AT1G65230 FMO ATGSR2 AT1G66430 AT1G67690 PSBY AT1G68240 AT1G68260 CER6 PSRP3/1 PHYLLO AT1G70280 ATBCA4 AOAT2 AP40 EDA17 LPA3 ENO1 AT1G74070 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. emb2184 PETE1 ACR3 AT1G77090 LACS9 AT1G77670 GNR1 ATGSTU20 LCR68 ATMEPCT AIR3 EMB2761 AT2G05920 AKN1 ATHNIR KCS9 AT2G17630 AAS PSB29 PDTPI ATSULA AtFBA1 AT2G21385 CYP79B3 ATMES7 ACL ATMES3 YCF37 AT2G24020 AT2G24060 AT2G24580 ATWRKY60 AT2G25530 AT2G25830 OVA4 PYL2 AtGLDP2 FDH BASS2 ATCDPMEK AT2G27680 ADT3 PY ANTR1 AtFAD3 ATFC-II RPT2 AT2G30695 FIONA AT2G31670 AT2G31790 AT2G33180 PRPL28 EDA3 AT2G35260 GDCH AT2G35410 SKL2 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ADK UMAMIT12 AT2G37500 AT2G37660 ATCAX1 PGP1 PnsL1 RCA ATCAMBP25 NTRC AT2G42130 AT2G42220 ATPPC2 ATLEUD1 AT2G43560 FAB2 UGT74F1 ATHOL1 AT2G44040 CHL-CPN10 AT2G44920 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 ATCB5-C PHR2 AtCGS1 ATCYP38 ATBCA1 AK3 EMB2768 ATF1 VTC4 ATGSTF11 RGL2 ATMS2 GDH3 EMB3119 ATSFR2 AT3G07270 AT3G07670 ATERDJ3A PTAC13 IDH-VI ADK1 OMR1 PAL4 AtFAD7 ATBSMT1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ATKRS-2 ESM1 AT3G14390 HEME1 mMDH2 AT3G15520 ADS3 MFP1 NDF4 AT3G16370 AAE7 RFC3 ECT6 MAT4 EMB1865 AT3G19030 AT3G19480 BCAT4 ATSAHH2 AT3G23940 HCF101 PLSP1 AT3G25805 ATPRX AT3G26450 GAPA CCB1 DEG1 UMAMIT47 ATCM1 AAO2 LTPG2 AT3G44740 RPL9 PTAC16 AT3G47650 EDD DCF GSA2 ATBCAT-3 AT3G50685 OEC33 AT3G51140 ATG4 PSRP2 CP33 FTSZ2-2 CYP97C1 ATPAL2 AT3G54210 AT3G54400 ATGRXCP OVA1 ATDFD SBPASE AT3G56010 AT3G56300 NAGK AT3G58140 IPMI1 GUN4 AT3G59780 AT3G59890 MTHFR1 AT3G60750 ATPIP1 ARATH;BSAS3;1 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 AT3G63510 ATT1 TROL AT4G02530 EMB3129 AOP PETC EMB2369 APR ATPC1 ATMSRB5 ARGAH2 APX4 ATPD AT4G10300 BASS5 CYP83A1 AT4G13840 SHM4 ATSAHH1 ATECI3 CYP97B3 CYP74B2 IAGLU AtCLA1 ATNS1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17560 LIL3:1 AT4G18460 CH-42 AK-HSDH ATRAB8D ATRP1 AT4G23670 TAR2 AT4G24750 ATRBP31 AT4G24830 AT4G24930 ACP4 CHLM B1 AtFBA7 VTC2 FAD4 AtENODL2 PSB28 emb2726 AT4G30020 AT4G30620 FAD6 PGR3 PDE334 ATSDX1 ATH1 AtGLDP1 SQD1 ATHDA14 AGD2 AT4G33760 AT4G34090 SEP1 EDA9 CLB6 MRL1 HCF244 ATSERAT3;2 MCA1 AtGGPPS11 XTH7 SHM1 ROC1 AtFBA2 AT4G39040 ATIPS1 AKN2 AT4G39970 SQD2 ATPDX1 AtHsp70-2 AT-HSC70-1 SBE2.2 54CP FD-GOGAT ATPAL3 SIR ATNAS1 AtFAD8 ATEGY2 2-Cys ERL2 ATMYB29 HEMC AT5G08650 AtPPa6 PMDH2 AT5G10690 AT5G10920 PPD5 DiT1 ATCYP20-2 AT5G13140 CARAB-AK-LYS ATIMD1 ATDEF2 AT-P5C1 EMB2247 PSY PCB2 AGP25 AT5G19240 AT5G19760 ATMGD2 ATCPN21 AT5G21060 AT5G22340 EMB1030 IMS3 IMS2 CaS SHM2 ARRPS1 ATGSL1 G6PD1 AT5G38520 OLI7 DEG8 UPM1 AT5G41760 NDH18 KCS20 AT5G44520 ATFKBP13 CHL AT5G45950 AT5G46580 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. LIL3:2 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT5G47970 ADG1 OVA2 CP31B AT5G51110 AT5G51310 ATPGMP OVA6 B2 AT5G52970 AtPLR1 RPL24 ANK AT5G55220 CER3 APO2 NPL1 AT5G58330 CLB4 ATMYB34 PDCB1 AtMYB28 DXR ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. GSA1 ATERS DCT ASN2 ATLFNR1 AT5G66470 ABA1 EPS1
GO:1901564 organonitrogen compound metabolic proces...	BP	6.864e-88	POR encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase LIP2 emb2394 LPA19 UGT1 EMB2784 ADT6 ABC1 AT1G09310 CRB ATGSTU18 ATGSTU17 ATFD1 ADT1 ATGLX1 AT1G11860 ATSRS AT1G12800 LSMT-L PnsL2 AT1G14345 AT1G15410 AT1G15710 CP24 NDF1 AT1G16080 GLYR2 AT1G18060 AT1G18440 ATSOT17 NDF6 LHCA2*1 ATCLH1 ATLFNR2 DRT112 AT1G22630 AOR G6PD3 ATSOFL1 AT1G28395 AT1G28530 PSAK ATIMD3 AK-HSDH AT1G31690 CYP97A3 AT-IE PRK ACT1 NRT1.5 AT1G32470 ABCI7 FdC2 PRPL11 AT1G33110 AT1G36280 SHM7 GAPB ATCAO CP22 GATB RACK1B FTSH1 GDC1 bHLH115 AT1G51110 4CL.1 PSAH-2 ABA2 PLDALPHA2 AtTLP18.3 AT1G55260 AGP21 AT1G55360 AT1G56050 AT1G56190 ATNAS4 ATATP-PRT1 AtHEMA1 EMB3108 AT1G60000 AT1G62250 ACO2 FMO ATSCO1 AT1G62780 ISPF NDF2 AT1G64880 AT1G65230 FMO ATGSR2 AT1G66430 pde194 PSBY AT1G68260 AT1G68440 CER6 STN7 PHYLLO FLN2 AT1G70280 AOAT2 ABCB26 CRR23 AT1G71480 LPA3 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. emb2184 LQY1 PETE1 AT1G76450 ACR3 AT1G77090 AT1G77670 ATGSTU20 AT1G79150 RPI2 LCR68 ATMEPCT EMB2761 AT2G05920 ATHNIR AT2G17630 AAS A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA AtFBA1 AT2G21530 AT2G21960 ATIPS2 CYP79B3 NAPRT2 ATMES3 YCF37 AT2G24060 PRPL35 AT2G24580 AT2G25830 OVA4 AtGLDP2 ATCDPMEK AT2G27680 ADT3 PY ATFC-II RPT2 AT2G30695 FIONA AT2G31670 AT2G33180 EDA3 GDCH AT2G35410 SKL2 AT2G35760 AT2G36145 MAT3 ATPAL1 ADK AT2G37500 AT2G37660 PDX1L4 PnsL1 AT2G40400 HEME2 SSL2 NTRC AT2G42220 ATLEUD1 AT2G43560 FAB2 UGT74F1 AT2G44040 CHL-CPN10 AT2G44920 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 KPHMT1 ATCB5-C PSAP AtCGS1 ATCYP38 ATBCA1 AK3 EMB2768 ATF1 ATGSTF11 ATMS2 GDH3 EMB3119 AT3G04840 RPL18 AT3G07270 ATYLMG1-1 AT3G08740 ADK1 OMR1 PAL4 AT3G10610 GYRA Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ATKRS-2 AGP12 ESM1 AT3G14390 HEME1 PRPS20 AT3G15460 ADS3 MFP1 NDF4 ECT6 MAT4 DAC RACK1C AT3G19030 AT3G19480 BCAT4 ATPURC GluTRBP AT3G22210 ELIP ATSAHH2 AT3G23940 ATGR1 HCF101 ATL5 ATPRX AT3G26450 DEG1 ATCM1 ATGSTU27 AT3G44740 ATHD2A PTAC16 DUT1 PEX11B AT3G47650 EDD AT3G48200 AT3G48420 GSA2 ATBCAT-3 OEC33 AT3G51140 ATG4 FTSZ2-2 CYP97C1 ATPAL2 PYRR HCEF1 AT3G54400 ATGR2 PPL1 ATTSC13 OVA1 ATDFD SBPASE AT3G56010 AT3G56300 AT3G56680 AT3G57010 AT3G57020 AT3G57030 NAGK ADSS AT3G58140 IPMI1 GUN4 AT3G59780 AT3G59890 MTHFR1 AT3G60750 AT3G61080 ARATH;BSAS3;1 AT3G61870 CYP20-3 APG3 ATIPT3 CSP41A AtcpRRF EMB3126 ANTR2 AT4G00895 TROL HEMG1 AT4G02530 PETC EMB2369 APR ATPC1 ATMSRB5 ARGAH2 APX4 ATNDK1 ATPD NDPK3 AT4G12600 CYP83A1 SHM4 AO1 CYP74B2 IAGLU AtCLA1 ATNS1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 LIL3:1 AT4G18440 AT4G18460 CH-42 AK-HSDH PyrD APT3 PGR5-LIKE AT4G23670 AT4G24350 TAR2 ATRBP31 AT4G24830 CHLM ATFIB2 AtFBA7 AR192 AT4G27700 AT4G28740 ATHMA2 AHA2 FAD6 ACDO1 PGR3 PDE334 ATSDX1 ATH1 AtGLDP1 ATHDA14 AtHMAC6 AGD2 AT4G33760 AT4G34090 SEP1 EDA9 ASE2 ATSERAT3;2 MCA1 BGAL3 ATHMA1 SHM1 ATMYB4 ROC1 AtFBA2 AT4G39040 ATIPS1 AKN2 SQD2 ATPDX1 AT5G02870 ADK2 AtNCS1 SBE2.2 ATPAL3 SIR ATNAS1 UGT76C2 2-Cys AT5G07090 AT5G08050 HEMC AGAL2 PDE340 AT5G08650 AtPPa6 PMDH2 AT5G10920 APT5 DiT1 ATCYP20-2 AT5G13140 ABAR CARAB-AK-LYS ATIMD1 AO AT-P5C1 EMB2247 ENH1 PSY PCB2 AGP25 ADG2 AT5G19240 ATCPN21 AT5G21060 AT5G21100 ATCKX5 AT5G22340 EMB1030 IMS3 IMS2 CaS HCF136 PGL5 SHM2 AT5G27390 ARRPS1 ATGSL1 G6PD1 AT5G35970 atylmg3 OLI7 UPM1 AT5G41760 AT5G43150 AT5G44520 ATFKBP13 CHL AT5G46220 AT5G46580 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. ADG1 HINT3 ATPTS OVA2 MMT CP31B AT5G51110 At-NEET ATPGMP OVA6 AT5G52780 AT5G52970 AtPLR1 ATOMT1 ATFTSZ1-1 APO2 NdhN AtRIBA3 CLB4 ATMYB34 PDCB1 AHA11 DXR ATNDPK2 GSA1 ATERS DCT ATGCH ASN2 ATLFNR1
GO:0019637 organophosphate metabolic process	BP	7.835e-86	AT1G01080 ATGPAT4 ATGPAT2 POR AT1G04420 LIP2 emb2394 LPA19 AtSLP1 ATNDI1 EMB2784 ATPCNA1 AT1G07700 ABC1 CRB ATGSTU18 AT1G10900 ATFD1 AT1G12800 AT1G13650 AT1G13730 LSMT-L PnsL2 AT1G14270 AT1G14345 NDF1 AT1G16080 UP6 FUG1 GLYR2 AT1G18060 NDF6 LHCA2*1 ATLFNR2 DRT112 ATPIP5K1 AT1G22630 AT1G22850 AT1G23410 AOR G6PD3 Cpn60beta4 AT1G28395 AT1G28530 AT1G29700 GlcNAc1pUT1 IMPL1 CYP97A3 AT-IE PRK ACT1 AT1G32470 FdC2 GBSS1 PRPL11 AT1G36280 GAPB ATMCM2 AT1G44920 RACK1B AT1G49380 FTSH1 GDC1 AT1G51110 PLDALPHA2 ATMUM4 AtTLP18.3 ZKT AT1G55960 AT1G56500 EMB3108 ABC4 ARP2 ATSCO1 AT1G62780 ISPF NDF2 AMT1;2 AT1G64880 AT1G65230 AT1G66130 AT1G66330 pde194 CER6 PSRP3/1 FLN2 AOAT2 PGM2 CRR23 AT1G70985 ATPIN1 AT1G74070 emb2184 LQY1 AT1G76450 AT1G77090 AT1G79150 NIP6 RPI2 ATMEPCT AT2G15020 PSB29 PDTPI ATSULA BBX18 AtFBA1 AT2G21385 AT2G21530 ATRNR1 AT2G21960 ATIPS2 CYP79B3 NAPRT2 YCF37 eIFiso4G2 AT2G24060 PRPL35 NPC2 ATCDPMEK AT2G27680 UXS6 PY ATFC-II AT2G30695 BBX25 CVL1 AT2G33180 PRPL28 AT2G34460 NF-YA4 EDA3 GDCH AT2G35410 SKL2 AT2G36145 ATSIG6 AT2G37240 ADK AT2G37500 AT2G37660 PDX1L4 PGP1 GLY1 SSL2 NTRC AT2G42130 AT2G43560 FAB2 AT2G44920 PSAP AtCCA1 PHR2 AT3G01060 AtSS2 ATCYP38 ATBCA1 EMB2768 ATF1 VTC4 ATGSTF11 NPC4 EMB3119 AT3G04840 RPL18 ATYLMG1-1 AT3G07670 PIP5K6 PTAC13 AT3G10610 GYRA Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. AT3G12320 PGK1 AT3G12930 AT3G13120 ESM1 AT3G15460 AT3G15520 ADS3 MFP1 NDF4 DAC RACK1C EMB1865 ATPURC GLTP3 AT3G22210 AT3G23940 HCF101 ATL5 AAPT2 AT3G25660 AT3G25805 CCB1 ATTSO2 DEG1 ATHD2A RPL9 PTAC16 DUT1 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 PSRP2 CP33 FTSZ2-2 CYP97C1 HCEF1 AT3G54210 PPL1 SBPASE AT3G56010 AT3G56290 ADSS AT3G58140 GUN4 AT3G59780 CDS5 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 CSP41A AtcpRRF APG1 EMB3126 ANTR2 AT4G00895 TROL ATGPAT3 AT4G02530 EMB3129 PETC ATPC1 CLS APX4 ATNDK1 ATPD AT4G10300 NDPK3 AT4G12600 CYP83A1 CYP97B3 AtCLA1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 AT4G17560 LIL3:1 AT4G17740 AT4G18440 CH-42 AK-HSDH PTAC14 PGR5-LIKE AT4G24750 AT4G24830 ACP4 CHLM SKS1 ATFIB2 AtFBA7 AR192 AT4G26860 FAD4 AT4G27700 PSB28 AT4G28740 emb2726 ATHMA2 AHA2 FAD6 AT4G31310 PGR3 PDE334 ATBT1 ATSDX1 ATH1 AtGLDP1 ATHDA14 AtHMAC6 AT4G34090 SEP1 CLB6 ASE2 MRL1 HCF244 MCA1 ATHMA1 SQE3 AtFBA2 AT4G39040 ATIPS1 SQD2 AT5G01260 ATPDX1 AT5G02870 SBE2.2 54CP ATEGY2 2-Cys AT5G07090 AT5G08050 HEMC PDE340 AT5G08650 PMDH2 ATMIPS3 AT5G10690 AT5G10920 APT5 PPD5 ATDEF2 AO AT5G15910 ENH1 PSY AtUGP2 AT5G17670 PCB2 ADG2 ATCPN21 CaS HCF136 ATSIG5 PGL5 AT5G27390 ARRPS1 AT5G35170 ATGSL1 G6PD1 atylmg3 AT5G38520 OLI7 NDH18 AT5G44520 ATFKBP13 CHL Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AMK2 ADG1 HINT3 AT5G50100 CP31B AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 AHL RPL24 AT5G55220 ATFTSZ1-1 NdhN CLB4 AHA11 DXR ATNDPK2 AT5G63700 AT5G64850 ATLFNR1 AT5G66470 ABA1
GO:0015979 photosynthesis	BP	3.826e-81	LPA1 POR AT1G05140 emb2394 LPA19 CRB ATSRS GAPA-2 PnsL2 AT1G14270 AT1G14345 CP24 NDF1 HCF173 ACR11 NDF6 LHCA2*1 ATLFNR2 AT1G20950 AT1G29700 AB165 PSAK PRK AT1G32470 ABCI7 RPL21C GAPB CP22 Lhca5 AT1G49975 FTSH1 AT1G52220 PSAH-2 AT1G54500 AtTLP18.3 NDF5 ZKT AT1G56500 CCB4 ABC4 ATFD2 ATSCO1 AT1G63610 NDF2 RPOD1 AT1G65230 RBCS1A PSBY CSK STN7 PHYLLO CRR23 LPA3 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NDH-O emb2184 LQY1 PETE1 AT1G76450 AT1G77090 TAPX APG2 CRR3 AT2G04039 LHCB2 PGR5 PSB29 PDTPI AtFBA1 AT2G21530 SEP2 AT2G26500 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G29360 PBCP AT2G30695 ARASP DAL EDA3 GDCH AT2G35410 SKL2 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 PnsL1 RCA LHCB4.3 AT2G42220 AT2G43560 AT2G43945 AT2G44920 PSAP RPH1 PnsL3 ATCYP38 ATBCA1 EMB3119 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G13120 ESM1 ADS3 NDF4 HCF107 DAC AtTic62 PSBTN GluTRBP HCF101 PLSP1 GAPA CCB1 DEG1 PTAC16 AT3G47070 AT3G47650 AT3G48420 OEC33 PSRP2 HCEF1 PPL1 SBPASE PPD6 PrfB3 GUN4 CDS5 AT3G61870 CYP20-3 CP12 CSP41A EMB3126 Conceptual translation of this open reading frame gave the sequence of a 229-residue hypothetical protein that contains the same sequence as the mature A. thaliana chloroplast luminal 19-kDa protein linked to a putative signal sequence. TROL AT4G02530 PETC FIB ATPC1 APX4 ATPD PPD1 AT4G16980 LIL3:1 DEG5 CH-42 PAM68 PSBQ AT4G22830 PGR5-LIKE ACP4 CHLM PSB28 FAD6 PDE334 AtHMAC6 SEP1 HCF244 SHM1 AtFBA2 SAMC1 STN8 OHP FD-GOGAT 2-Cys AT5G08050 HEMC AT5G08400 AT5G08650 AtPPa6 PMDH2 ATMIPS3 PPD5 EMB3136 ABAR ENH1 ADG2 ATOEP80 ATGER3 CRR42 CaS HCF136 ATSIG5 AT5G27390 AT5G27560 ARRPS1 AT5G35170 AMOS1 G6PD1 RBCS3B AT5G38520 APE1 CRR7 DEG8 ARC6 AT5G44520 AtCEST AT5G45170 CHL LIL3:2 AT5G48790 ATFRO7 CP31B AT5G51110 OVA6 AT5G52780 LUT2 NPL1 NdhN AT5G58330 AT5G59250 CLB4 ATLFNR1 MATK
GO:1901135 carbohydrate derivative metabolic proces...	BP	1.019e-79	AT1G01080 AtBE2 POR AT1G04420 LIP2 emb2394 LPA19 EMB2784 AT1G08280 ABC1 CRB ATGSTU18 ATFD1 ATNRT1 AT1G12800 AT1G13650 LSMT-L PnsL2 AT1G14270 AT1G14345 NDF1 AT1G16080 CYP79F2 BUS1 AtHBP1 FUG1 GLYR2 AT1G18060 ATSOT17 NDF6 LHCA2*1 ATLFNR2 DRT112 AT1G22630 AOR G6PD3 Cpn60beta4 AT1G27120 AT1G28530 GlcNAc1pUT1 AK-HSDH CYP97A3 PRK ACT1 AT1G32470 FdC2 GBSS1 PRPL11 AT1G36280 GAPB AT1G44920 RACK1B AT1G49380 FTSH1 GDC1 AT1G51110 AT1G51340 ATMUM4 ABCD2 AtTLP18.3 AT1G56500 EMB3108 ABC4 FMO FMO ATSCO1 AT1G62780 ISPF NDF2 AT1G64880 AT1G65230 FMO pde194 CER6 PSRP3/1 PHO1;H1 FLN2 PGM2 CRR23 AT1G74070 ATSOT18 emb2184 LQY1 AT1G76450 AT1G77090 AT1G79150 RPI2 ATMEPCT AIR3 AKN1 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21530 AT2G21960 CYP79B3 YCF37 AT2G24060 PRPL35 BASS2 ATCDPMEK AT2G27680 UXS6 PY ATFC-II AT2G30695 AT2G31670 AT2G31790 AT2G33180 PRPL28 EDA3 AT2G35260 GDCH AT2G35410 SKL2 AT2G36145 MAT3 ATSIG6 UMAMIT12 AT2G37500 AT2G37660 ATCAX1 GLY1 NTRC AT2G42130 ATPPC2 ATLEUD1 AT2G43560 FAB2 ATHOL1 AT2G44920 ATCB5-C PSAP PHR2 AtSS2 ATCYP38 ATBCA1 ATF1 VTC4 ATGSTF11 EMB3119 AT3G04840 RPL18 ATSFR2 ATYLMG1-1 AT3G07670 PTAC13 ADK1 GYRA Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 AT3G15460 AT3G15520 ADS3 MFP1 NDF4 MAT4 DAC RACK1C EMB1865 BCAT4 AT3G22210 AT3G23940 HCF101 PLSP1 ATL5 AT3G25805 ATPRX CCB1 AT3G27540 DEG1 UMAMIT47 ATHD2A RPL9 PTAC16 DUT1 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 AT3G50685 OEC33 ATG4 PSRP2 CP33 FTSZ2-2 CYP97C1 PYRR HCEF1 AT3G54210 ATGRXCP PPL1 SBPASE AT3G56010 UGP3 ADSS AT3G58140 IPMI1 GUN4 AT3G59780 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 CSP41A AtcpRRF APG1 EMB3126 ANTR2 AT4G00895 TROL AT4G02530 EMB3129 AOP PETC APR ATPC1 APX4 ATNDK1 ATPD ATSPS4F AT4G10300 NDPK3 BASS5 CYP83A1 AT4G13840 CYP97B3 AtCLA1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 AT4G17560 LIL3:1 AT4G18440 CH-42 ATRP1 APT3 PGR5-LIKE AT4G24350 AT4G24750 AT4G24930 ACP4 CHLM ATFIB2 AtFBA7 AR192 AtENODL2 AT4G27700 PSB28 AT4G28740 emb2726 AT4G30020 ATHMA2 AHA2 FAD6 PGR3 PDE334 ATH1 AtGLDP1 SQD1 ATHDA14 AtHMAC6 AT4G34090 SEP1 CLB6 MRL1 HCF244 AtGGPPS11 ATHMA1 XTH7 AtFBA2 AT4G39040 ATIPS1 AKN2 AT4G39970 SQD2 ATPDX1 AT5G02870 ADK2 SBE2.2 54CP SIR ATEGY2 UGT76C2 2-Cys AT5G07090 ATMYB29 AT5G08050 HEMC AGAL2 PDE340 AT5G08650 AtPPa6 PMDH2 AT5G10690 APT5 PPD5 ATIMD1 ATDEF2 ENH1 PSY AT5G17670 PCB2 ADG2 ATMGD2 ATCPN21 IMS3 IMS2 CaS HCF136 ATSS1 PGL5 AT5G27390 ARRPS1 ATGSL1 G6PD1 atylmg3 AT5G38520 OLI7 DEG8 NDH18 AT5G44520 ATFKBP13 CHL PYL1 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. ADG1 HINT3 MMT CP31B AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 RPL24 AT5G55220 ATFTSZ1-1 APO2 NPL1 NdhN AT5G58330 CLB4 ATMYB34 AtMYB28 AHA11 DXR ATNDPK2 ATLFNR1 AT5G66470
GO:1901576 organic substance biosynthetic process	BP	1.302e-79	LHY AT1G01080 KCS1 ASG4 ATGPAT4 CER1 ATGPAT2 GATL5 ATCSLD5 ATWEE1 AtD27 AtBE2 POR ATBARD1 AT1G04040 KCS2 AXR3 AT1G04420 AT1G04480 PDLP2 BDL LIP2 AT1G04680 CTF18 emb2394 BT3 AT1G05870 CCR2 AtSLP1 ATNDI1 EMB2784 ATPCNA1 AT1G07700 KCS3 ATLIG1 ADT6 AT1G08280 ABC1 emb2411 AT1G09310 CRB AT1G09390 AT1G09440 similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase AT1G09590 AT1G09690 iPGAM1 AT1G10585 AT1G10740 Z-ISO ATRECQ4A ATFD1 AT1G11670 ATSS3 ADT1 ATGLX1 AT1G11860 ATSRS ATNRT1 SUMM2 AT1G12800 AT1G13650 AT1G13730 LSMT-L AT1G14270 AT1G14345 AtMYB124 ATWHY1 AT1G14460 AT1G14600 ATGA3OX1 CYCA2;3 AT1G15710 CP24 AT1G15930 NDF1 AT1G16080 CYP79F2 BUS1 HCF173 UP6 SPS2 AtHBP1 FUG1 AT1G18060 AT1G18440 AT1G18540 ATSOT17 NDF6 AT1G19140 LHCA2*1 BES1 AT1G19490 JMT ATCLH1 AT1G19680 ATLFNR2 DRT112 AT1G20950 AGL87 AT1G22630 AT1G22850 AT1G23410 AOR GATL8 Cpn60beta4 AT1G26790 AT1G26880 AtHB23 ATHB54 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. AT1G27120 SPL11 AT1G28395 AT1G28530 SRD2 AT1G28570 ARAB-1 AT1G29700 PSAK AAE14 UGT78D1 ATIMD3 IMPL1 AK-HSDH CYP97A3 AT-IE PRK ATPRR1 ACT1 NRT1.5 AT1G32470 ABCI7 FdC2 GBSS1 PRPL11 AT1G33110 AtGXMT1 At-FANCM AT1G35560 RPL21C AT1G36280 AT1G41880 GAPB Aty2 ATCAO CP22 ATMCM2 AT1G44920 EMB3105 GATB RACK1B AT1G49380 LACS2 AT1G49580 AtCXE5 POLGAMMA2 GDC1 bHLH115 AT1G51110 AT1G51340 4CL.1 PSAH-2 ABA2 mMDH1 ATMUM4 AT1G54220 ABCD2 AT1G54500 AtTLP18.3 AT1G54790 AT1G55210 AT1G55260 AGP21 AT1G55360 NDF5 ZKT CPN60B AT1G55960 HAC04 AT1G56050 AT1G56190 ATNAS4 AT1G56500 AtMYB50 AT1G57660 AT1G57770 ATATP-PRT1 AT1G58170 AtHEMA1 ATXYN1 ZCF125 EMB3108 AT1G60000 DHNS ABC4 AT1G61190 AT1G61300 ARP2 ACO2 FMO FMO AT1G62630 ATSCO1 AT1G62780 AT1G63470 ISPF REB1 AT1G64500 AT1G64510 BDG1 NDF2 AMT1;2 RPOD1 AT1G64880 G-TMT 4CL3 AT1G65070 AT1G65230 FMO AT1G65870 AT1G66130 AT1G66180 ATGSR2 AtMYB20 AT1G66330 AT1G66430 pde194 PSBY CSK AT1G68240 AT1G68260 AT1G68440 BBX14 CER6 PSRP3/1 AT1G68600 PHO1;H1 PHYLLO FLN2 AT1G70000 GATL9 AT1G70280 PG2 AT1G70550 AOAT2 AT1G70600 PGM2 ATPIN3 AT1G70985 ANAC030 AP40 AT1G72430 LPA3 AT1G73110 AT1G73390 ATPIN1 AT1G73600 AT1G73650 BBX16 AT1G74070 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. RPS9 AT1G75150 emb2184 AtGH9B7 PETE1 AT1G76450 ACR3 AT1G77090 LACS9 AT1G77670 AT1G77750 AT1G77940 ATGSTU20 SPS1 AT1G78995 AT1G79150 AT1G79630 CS17 AT1G80030 NIP6 APG2 AT2G01210 ATPIN4 LCR68 ATMEPCT AIR3 FLA7 AT2G04790 EMB2761 AT2G05920 MCM5 AKN1 AT2G15020 ATHNIR KCS9 BLH7 AT2G17630 rps15ab AT2G20450 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 AT2G21385 AT2G21530 ATRL2 ATRNR1 AT2G21860 ATIPS2 CYP79B3 IAA8 NAPRT2 ATMES3 YCF37 AT2G23690 eIFiso4G2 AT2G24060 PRPL35 PDE319 HHP3 AT2G24170 ATWRKY60 AT2G25530 ESE2 AT2G25830 OVA4 CYP711A1 FDH NPC2 BASS2 ATCDPMEK AGO4 AT2G27360 AT2G27680 AT2G27710 ADT3 ARF10 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 AT2G29180 PY ANTR1 AtFAD3 MAPKKK14 ATFC-II TCL2 RPT2 AT2G30695 TCP10 FIONA ATERF15 ATCDT1A BBX25 AT2G31670 AT2G31790 MRL7-L AT2G32060 ATOFP16 BAM6 ATCSLB03 ATCSLB04 AT2G32640 ATCB5-B ATCOP1 AT2G33180 DAL PRPL28 BUBR1 GALS1 AT2G34460 CYP710A2 HMR ATHB-14 NF-YA4 EDA3 AT2G35260 GDCH AT2G35410 SKL2 ATERF38 AT2G35840 NHL12 AT2G36145 RPL24A AT2G36630 MAT3 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 ADK ATRPS5B UMAMIT12 AT2G37500 AT2G37600 AS1 AT2G37660 AtHBP2 ATCAX1 PDX1L4 TBL34 GAUT7 AT2G39240 SNZ PGP1 ATRPL23A PnsL1 RCA AT2G40200 AT2G40400 HEME2 ETG1 ARR16 GLY1 SSL2 ARR8 AT2G41330 NTRC AT2G42130 AT2G42220 ATPPC2 NPG1 ATLEUD1 AT2G43560 FAB2 AT2G44040 AT2G44230 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 KPHMT1 ATCB5-C AtCCA1 PHR2 AT3G01060 AtCGS1 AtSS2 PnsL3 ATCYP38 ATBCA1 LSF1 ATPPT2 AT3G01660 AK3 EMB2768 ATF1 AT3G02820 PNT1 VTC4 ATGSTF11 AtUGP1 RGL2 AT3G03770 ATMS2 EMB3119 AT3G04840 AT3G05560 RPL18 ATSFR2 AT3G06680 TRX AT3G07110 AT3G07270 ATYLMG1-1 AT3G07670 PIP5K6 AT3G08740 ATERDJ3A AT3G09050 AT3G09200 PTAC13 LCL5 ADK1 OMR1 GYRB1 AT3G10310 PAL4 CYP77A6 AT3G10610 GYRA AT3G10760 LSF2 AtFAD7 ATBSMT1 AT3G11510 CYC2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST ACT11 AT3G12320 PGK1 AT3G12930 AT3G13000 AT3G13120 AT3G13180 ATKRS-2 AT3G13510 AGP12 ESM1 AT3G14390 HEME1 PRPS20 AT3G15460 AT3G15520 ADS3 MFP1 AT3G16080 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. EMB2083 AT3G16370 HCF107 RFC3 ECT6 MAT4 HYH DAC WOX1 EMB1270 RACK1C AT3G18280 EMB1865 ATUNG AT3G19030 AT3G19100 AT3G19370 ATCAD4 AT3G19480 BCAT4 AT3G20010 AT3G20150 AT3G20260 ATPURC AtBBX32 GluTRBP 4CL2 GLTP3 UGT84A2 ABCI12 BBX31 AT3G22210 ATTSO1 ELIP ATSR2 AT3G23090 bHLH34 AT3G23390 AT3G23510 AT3G23530 ATSAHH2 ATTOPII AT3G23930 AT3G23940 AT3G24190 HCF101 PLSP1 AFH1 ATL5 AAPT2 AT3G25660 AT3G25805 CRF11 RPL15 ATPRX AT3G26450 ORF02 GAPA CCB1 ATTSO2 GHS1 AT3G27200 AT3G27540 AT3G27640 RPL12 RPL12-C DEG1 UMAMIT47 AT3G28760 ATCM1 CHR38 AAO2 anac061 AT3G44590 AT3G44740 ATHD2A RPL9 AT3G45030 ATMYB48 PTAC16 DUT1 AT3G47650 EDD AT3G48200 AT3G48420 AT3G48440 AT3G48460 DCF GSA2 ATBBC1 DMS3 BAM2 CRK ICK2 AT3G50685 OEC33 AT3G51140 AT3G51280 ATG4 AT3G51950 PSRP2 ATSPP2 CP33 AT3G52740 FTSZ2-2 AT3G52900 ELL1 CYP97C1 ATPAL2 AT3G53680 PYRR HCEF1 AT3G54210 AT3G54390 AT3G54400 AT3G54750 ATGRXCP PDE329 ATTSC13 OVA1 ATDFD SBPASE AT3G56010 UGP3 AT3G56230 AT3G56290 AT3G56300 AT3G56680 PSRP5 BHLH038 BHLH039 AT3G57010 AT3G57020 AT3G57030 ARR9 PrfB3 AT3G57400 NAGK ADSS GIS AT3G58140 IPMI1 GUN4 ATRAD21.2 AT3G59780 AT3G59890 AT3G60245 CDS5 ATHAM2 AT3G60750 SDR1 ARATH;BSAS3;1 AT3G61870 AT3G61950 CYP20-3 UBQ5 CP12 APG3 CSP41A AtcpRRF APG1 EMB3126 BRCA2(IV) UNE10 ATHAM3 AT4G00165 BAM2 AT4G00810 AT4G00895 MEE47 TROL GT72B1 HEMG1 ATGPAT3 MCM7 AT4G02530 EMB3129 AOP AT4G03090 PETC EMB2369 APR ATPC1 ATMSRB5 CLS APX4 ATNDK1 ATPD ATSPS4F AT4G10300 AT4G10450 AT4G10600 NDPK3 AT4G11120 AT4G11175 BASS5 AT4G12600 AT4G13170 CYP83A1 AT4G13840 ATSAHH1 The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. AT4G14200 PDE226 AT4G14360 NF-YB3 AT4G15000 CYP97B3 AT4G15430 CYP74B2 AtCLA1 AT4G16141 SPK1 ATOPT3 SVR7 AtBAM3 ATNS1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 AT4G17560 LIL3:1 AT4G17740 MYC4 AT4G18440 CH-42 RPL16B AG CYCT1;2 AK-HSDH AT4G19985 PTAC14 ATRAB8D AT4G20760 GHR1 PyrD ATRP1 sks4 APT3 PGR5-LIKE CCS52A1 AESP AT4G23670 AtDIR6 ATCSLG3 TAR2 AT4G24750 ATRBP31 AT4G24790 AT4G24830 AT4G24930 ACP4 CHLM SKS1 ATFIB2 B1 AT4G25870 AtFBA7 AT4G26660 AR192 VTC2 AT4G26860 FAD4 AtENODL2 AT4G27640 AT4G27700 MRL7 PSB28 emb2726 AT4G30020 ATHMA2 AHA2 AT4G30470 AT4G30800 FAD6 LRL2 AT4G31310 PGR3 PDE334 ATBT1 Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development. ATSDX1 AT4G32915 ATH1 ATCBL10 AtGLDP1 SQD1 AT4G33110 AT4G33400 ATHDA14 AT4G33500 AtHMAC6 AGD2 AT4G33760 AT4G34090 SEP1 EDA9 CLB6 ATCAP1 AT4G34555 BLH6 SQS2 AT4G34730 ASE2 MRL1 HCF244 AT4G35270 XCP1 ATSERAT3;2 MCA1 GATA7 BGAL3 ROT3 ATRL3 AT4G36640 AtGGPPS11 MAP1D ATHMA1 LBD39 SQE3 XTH7 SHM1 pde191 ATMYB4 ROC1 BBX19 AtFBA2 AT4G39040 APL3 ATCAD9 SAMC1 AT4G39630 ATIPS1 AKN2 AT4G39970 LAC10 SQD2 AT5G01260 TBL3 ATPDX1 ATOFP1 Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ABCI20 AtHsp70-2 AT-HSC70-1 AT5G02610 LCL1 AT5G02870 AT5G02940 LAC11 ADK2 AtNCS1 SBE2.2 PTL 54CP GYRB2 FD-GOGAT SIR AT5G04840 ATNAS1 AtCHIL EMB2771 AtFAD8 ATEGY2 AT5G05790 2-Cys AT5G06770 AT5G07020 AT5G07090 ERL2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. SMC6A ATMYB29 ATRPA70B AT5G08050 HEMC AGAL2 PDE340 ATFLS1 AT5G08650 AT5G09240 AtPPa6 PMDH2 CESA5 ATMIPS3 AT5G10690 AT5G10920 APT5 HY5 OCP3 PPD5 AtMYB3R4 TINY2 AT5G12110 ATTERC Encodes a protein with similarity to REN1, a Rho GTPase activating protein. DiT1 ATGSL12 ABAP1 ATCYP20-2 AT5G13140 EMB3136 ABAR ATCHS CARAB-AK-LYS ATIMD1 ATDEF2 AO AT-P5C1 AT5G15050 AtENODL17 GAUT14 AtbZIP3 AT5G15910 AT5G16130 AtMYB43 EMB2247 UGT78D2 PSY RVE1 AtUGP2 AT5G17350 PSRP6 PCB2 BAM9 AGP25 ADG2 AT5G19240 AT5G19730 AtHBP5 ATMGD2 AT5G20700 ATCPN21 AT5G21060 AT5G21100 AT5G22340 anac090 AT5G22440 EMB1030 IMS3 IMS2 CaS HCF136 AT5G23480 ATSIG5 SQE5 AT5G24155 ATSS1 LSU2 AT5G24760 CRY3 ESE3 AT5G25590 tny AT5G26010 AT5G26330 AT5G27390 MK AT5G27560 AT5G28500 ARRPS1 AT5G35170 AMOS1 ATGSL1 G6PD1 atylmg3 ARF8 CIR1 ASF1B AT5G38520 APE1 CRR7 CDF2 OLI7 DEG8 UPM1 RPL27 RPS10B AT5G41760 AT5G42070 ATS NF-YC13 TZP NDH18 KCS20 SDG18 ABCI21 AT5G44520 MCM6 AT5G45280 ATFKBP13 AT5G45720 AT5G45775 CHL MCM3 BSK2 AT5G46580 bHLH071 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. NF-YB2 AMK2 ADG1 AT5G48740 ATPTS HCT OVA2 ATMYB111 AT5G50100 CP31B FSD2 AT5G51110 AT5G51310 ATTPPA ATPGMP AT5G52010 OVA6 B2 AT5G52950 AT5G52970 AT5G53070 TRY ATPMEPCRF AtPLR1 AT5G53920 ATOMT1 PTAC15 RPL24 ANK AT5G55220 ATFTSZ1-1 CRR21 AT5G56040 AT5G56840 LUT2 CER3 APO2 NPL1 NdhN AT5G58330 AtcPT4 AT5G59740 AtRIBA3 AT5G59850 ATLAC17 AT5G60130 CLB4 AT5G60670 ATMYB34 ATRPA70D PDCB1 AT5G61170 AtMYB28 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AGL42 ATGT18 ANAC101 CDF1 AHA11 DXR ARR6 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. GSA1 AT5G63700 ATERS ATGCH AT5G64850 ASN2 ANNAT2 BAM1 ATLFNR1 AT5G66230 AT5G66470 ATDDM1 AT5G66770 ABA1 ICU2 EPS1 AT5G67200 MATK
GO:0051186 cofactor metabolic process	BP	6.967e-79	POR encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase LIP2 emb2394 LPA19 ABC1 CRB ATGSTU18 ATFD1 AT1G12800 PnsL2 AT1G14345 NDF1 AT1G16080 SPS2 GLYR2 AT1G18060 AT1G18440 NDF6 AT1G19140 LHCA2*1 ATCLH1 ATLFNR2 DRT112 AT1G20950 AT1G22630 AOR G6PD3 AAE14 CYP97A3 PRK ACT1 AT1G32470 FdC2 PRPL11 GAPB ATCAO ATMCM2 FTSH1 GDC1 AT1G51110 AT1G54220 AtTLP18.3 AT1G56050 AtHEMA1 DHNS ABC4 AT1G62250 ATSCO1 AT1G62780 ISPF NDF2 AT1G65230 CER6 STN7 PHYLLO ABCB26 CRR23 AT1G71480 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. emb2184 AtGH9B7 LQY1 AT1G76450 AT1G77090 SPS1 RPI2 ATMEPCT FLA7 Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA AtFBA1 AT2G21530 AT2G21960 ATIPS2 CYP79B3 NAPRT2 YCF37 PRPL35 AT2G24580 ATCDPMEK AT2G27680 PY ATFC-II ATCDT1A AT2G33180 EDA3 GDCH AT2G35410 SKL2 AT2G35760 AT2G36145 MAT3 AT2G37660 PDX1L4 AT2G40400 HEME2 NTRC AT2G43560 FAB2 AT2G44920 KPHMT1 PSAP ATCYP38 ATBCA1 ATF1 ATGSTF11 EMB3119 AT3G07270 ATHST PGK1 AT3G13120 ESM1 HEME1 PRPS20 ADS3 MFP1 NDF4 MAT4 DAC AT3G20260 GluTRBP AT3G22210 ELIP HCF101 ATPRX DEG1 PTAC16 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 ELL1 CYP97C1 HCEF1 PPL1 ATDFD SBPASE AT3G56010 AT3G56680 GUN4 AT3G59780 AT3G61080 AT3G61870 CYP20-3 APG3 CSP41A AtcpRRF APG1 EMB3126 ANTR2 TROL HEMG1 AT4G02530 PETC ATPC1 APX4 ATPD CYP83A1 AtCLA1 SPK1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. LIL3:1 CH-42 PGR5-LIKE AtDIR6 3xHMG-box2 CHLM AT4G25870 AtFBA7 AT4G26860 AT4G27700 AT4G28740 FAD6 ACDO1 AtENODL15 PGR3 PDE334 ATSDX1 ATH1 AtGLDP1 ATHDA14 AT4G34090 SEP1 AtFBA2 SQD2 ATPDX1 SBE2.2 2-Cys AT5G08050 HEMC AT5G08650 PMDH2 ABAR AO AtENODL17 ENH1 PSY PCB2 ADG2 CaS HCF136 PGL5 ARRPS1 ATGSL1 G6PD1 AT5G35970 atylmg3 UPM1 AT5G43150 AT5G44520 ATFKBP13 CHL Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. ADG1 ATPTS MMT CP31B AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 AT5G53920 AT5G56040 NdhN AtcPT4 CLB4 DXR GSA1 ANNAT2 ATLFNR1
GO:0009058 biosynthetic process	BP	4.330e-78	LHY AT1G01080 KCS1 ASG4 ATGPAT4 CER1 ATGPAT2 GATL5 ATCSLD5 ATWEE1 AtD27 AtBE2 POR ATBARD1 AT1G04040 KCS2 AXR3 AT1G04420 AT1G04480 PDLP2 BDL LIP2 AT1G04680 CTF18 emb2394 BT3 AT1G05870 CCR2 AtSLP1 ATNDI1 EMB2784 ATPCNA1 AT1G07700 KCS3 ATLIG1 ADT6 AT1G08280 ABC1 emb2411 AT1G09310 CRB AT1G09390 AT1G09440 similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase AT1G09590 AT1G09690 iPGAM1 AT1G10585 AT1G10740 Z-ISO ATRECQ4A ATFD1 AT1G11670 ATSS3 ADT1 ATGLX1 AT1G11860 ATSRS ATNRT1 SUMM2 HPR3 AT1G12800 AT1G13650 AT1G13730 LSMT-L AT1G14270 AT1G14345 AtMYB124 ATWHY1 AT1G14460 AT1G14600 ATGA3OX1 CYCA2;3 AT1G15710 CP24 AT1G15930 NDF1 AT1G16080 CYP79F2 BUS1 HCF173 UP6 SPS2 AtHBP1 FUG1 AT1G18060 AT1G18440 AT1G18540 ATSOT17 NDF6 AT1G19140 LHCA2*1 BES1 AT1G19490 JMT ATCLH1 AT1G19680 ATLFNR2 DRT112 AT1G20950 AGL87 AT1G22630 AT1G22850 AT1G23410 AOR GATL8 Cpn60beta4 AT1G26790 AT1G26880 AtHB23 ATHB54 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. AT1G27120 SPL11 AT1G28395 AT1G28530 SRD2 AT1G28570 ARAB-1 AT1G29700 PSAK AAE14 UGT78D1 ATIMD3 IMPL1 AK-HSDH CYP97A3 AT-IE PRK ATPRR1 ACT1 NRT1.5 AT1G32470 ABCI7 FdC2 GBSS1 PRPL11 AT1G33110 AtGXMT1 At-FANCM AT1G35560 RPL21C AT1G36280 AT1G36390 ATNR2 AT1G41880 GAPB Aty2 ATCAO CP22 ATMCM2 AT1G44920 EMB3105 GATB RACK1B AT1G49380 LACS2 AT1G49580 AtCXE5 POLGAMMA2 GDC1 bHLH115 AT1G51110 AT1G51340 ABCG12 4CL.1 PSAH-2 ABA2 mMDH1 ATMUM4 AT1G54220 ABCD2 AT1G54500 AtTLP18.3 AT1G54790 AT1G55210 AT1G55260 AGP21 AT1G55360 NDF5 ZKT CPN60B AT1G55690 AT1G55960 HAC04 AT1G56050 AT1G56190 ATNAS4 AT1G56500 AtMYB50 AT1G57660 AT1G57770 ATATP-PRT1 AT1G58170 AtHEMA1 ATXYN1 ZCF125 EMB3108 AT1G60000 DHNS ABC4 AT1G61190 AT1G61300 ARP2 ACO2 FMO FMO AT1G62630 ATSCO1 AT1G62780 AT1G63470 ISPF REB1 AT1G64500 AT1G64510 BDG1 NDF2 AMT1;2 RPOD1 AT1G64880 G-TMT 4CL3 AT1G65070 AT1G65230 FMO AT1G65870 AT1G66130 AT1G66180 ATGSR2 AtMYB20 AT1G66330 AT1G66430 pde194 PSBY CSK AT1G68240 AT1G68260 AT1G68440 BBX14 CER6 PSRP3/1 AT1G68600 PHO1;H1 PHYLLO FLN2 AT1G70000 GATL9 AT1G70280 PG2 AT1G70550 AOAT2 AT1G70600 PGM2 ATPIN3 AT1G70985 ANAC030 AP40 AT1G72430 LPA3 AT1G73110 AT1G73390 ATPIN1 AT1G73600 AT1G73650 BBX16 AT1G74070 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. RPS9 AT1G75150 emb2184 AtGH9B7 PETE1 AT1G76450 ACR3 AT1G77090 LACS9 AT1G77670 AT1G77750 GNR1 AT1G77940 ATGSTU20 SPS1 AT1G78995 AT1G79150 AT1G79630 CS17 AT1G80030 NIP6 APG2 AT2G01210 ATPIN4 LCR68 ATMEPCT AIR3 FLA7 AT2G04790 EMB2761 AT2G05920 MCM5 AKN1 AT2G15020 ATHNIR KCS9 BLH7 AT2G17630 rps15ab AT2G20450 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 AT2G21385 AT2G21530 ATRL2 ATRNR1 AT2G21860 ATIPS2 CYP79B3 IAA8 NAPRT2 ATMES3 YCF37 AT2G23690 eIFiso4G2 AT2G24060 PRPL35 PDE319 HHP3 AT2G24170 ATWRKY60 AT2G25530 ESE2 AT2G25830 OVA4 CYP711A1 FDH NPC2 BASS2 ATCDPMEK AGO4 AT2G27360 AT2G27680 AT2G27710 ADT3 CH-CPN60A ARF10 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 AT2G29180 PY ANTR1 AtFAD3 MAPKKK14 ATFC-II TCL2 RPT2 AT2G30695 TCP10 FIONA ATERF15 ATCDT1A BBX25 AT2G31670 AT2G31790 MRL7-L AT2G32060 ATOFP16 BAM6 ATCSLB03 ATCSLB04 AT2G32640 ATCB5-B ATCOP1 AT2G33180 DAL PRPL28 BUBR1 GALS1 AT2G34460 CYP710A2 HMR ATHB-14 NF-YA4 EDA3 AT2G35260 GDCH AT2G35410 SKL2 ATERF38 AT2G35840 NHL12 AT2G36145 RPL24A AT2G36630 MAT3 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 ADK ATRPS5B UMAMIT12 AT2G37500 AT2G37600 AS1 AT2G37660 AtHBP2 ATCAX1 PDX1L4 TBL34 GAUT7 AT2G39240 SNZ PGP1 ATRPL23A PnsL1 RCA AT2G40200 AT2G40400 HEME2 ETG1 ARR16 GLY1 SSL2 ARR8 AT2G41330 NTRC AT2G42130 AT2G42220 ATPPC2 NPG1 ATLEUD1 AT2G43560 FAB2 AT2G44040 AT2G44230 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 KPHMT1 ATCB5-C AtCCA1 PHR2 RPH1 AT3G01060 AtCGS1 AtSS2 PnsL3 ATCYP38 ATBCA1 LSF1 ATPPT2 AT3G01660 AK3 EMB2768 ATF1 AT3G02820 PNT1 VTC4 ATGSTF11 AtUGP1 RGL2 AT3G03770 ATMS2 EMB3119 AT3G04840 AT3G05560 RPL18 ATSFR2 AT3G06680 TRX AT3G07110 AT3G07270 ATYLMG1-1 AT3G07670 PIP5K6 AT3G08740 ATERDJ3A AT3G09050 AT3G09200 PTAC13 LCL5 ADK1 OMR1 GYRB1 AT3G10310 PAL4 CYP77A6 AT3G10610 GYRA AT3G10760 LSF2 AtFAD7 ATBSMT1 AT3G11510 CYC2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST ACT11 AT3G12320 PGK1 AT3G12930 AT3G13000 AT3G13120 AT3G13180 ATKRS-2 AT3G13510 AGP12 ESM1 AT3G14390 GOX2 HEME1 mMDH2 PRPS20 AT3G15460 AT3G15520 ADS3 MFP1 AT3G16080 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. EMB2083 AT3G16370 HCF107 RFC3 ECT6 MAT4 HYH DAC WOX1 EMB1270 RACK1C AT3G18280 EMB1865 ATUNG AT3G19030 AT3G19100 AT3G19370 ATCAD4 AT3G19480 BCAT4 AT3G20010 AT3G20150 AT3G20260 ATPURC AtBBX32 GluTRBP 4CL2 GLTP3 UGT84A2 ABCI12 BBX31 AT3G22210 ATTSO1 ELIP ATSR2 AT3G23090 bHLH34 AT3G23390 AT3G23510 AT3G23530 ATSAHH2 ATTOPII AT3G23930 AT3G23940 AT3G24190 HCF101 PLSP1 AFH1 ATL5 AAPT2 AT3G25660 AT3G25805 CRF11 RPL15 ATPRX AT3G26450 ORF02 GAPA CCB1 ATTSO2 GHS1 AT3G27200 AT3G27540 AT3G27640 RPL12 RPL12-C DEG1 UMAMIT47 AT3G28760 ATCM1 CHR38 AAO2 anac061 AT3G44590 AT3G44740 ATHD2A RPL9 AT3G45030 ATMYB48 PTAC16 DUT1 AT3G47650 EDD AT3G48200 AT3G48420 AT3G48440 AT3G48460 DCF GSA2 ATBBC1 DMS3 BAM2 CRK ICK2 AT3G50685 OEC33 AT3G51140 AT3G51280 ATG4 AT3G51950 PSRP2 ATSPP2 CP33 AT3G52740 FTSZ2-2 AT3G52900 ELL1 CYP97C1 ATPAL2 AT3G53680 PYRR HCEF1 AT3G54210 AT3G54390 AT3G54400 AT3G54750 ATGRXCP PDE329 ATTSC13 OVA1 ATDFD SBPASE AT3G56010 UGP3 AT3G56230 AT3G56290 AT3G56300 AT3G56680 PSRP5 BHLH038 BHLH039 AT3G57010 AT3G57020 AT3G57030 ARR9 PrfB3 AT3G57400 NAGK ADSS GIS AT3G58140 IPMI1 GUN4 ATRAD21.2 AT3G59780 AT3G59890 AT3G60245 CDS5 ATHAM2 AT3G60750 SDR1 ARATH;BSAS3;1 AT3G61870 AT3G61950 CYP20-3 UBQ5 CP12 APG3 ATIPT3 CSP41A AtcpRRF APG1 EMB3126 BRCA2(IV) UNE10 ATHAM3 AT4G00165 BAM2 AT4G00810 AT4G00895 MEE47 TROL GT72B1 HEMG1 ATGPAT3 MCM7 AT4G02530 EMB3129 AT4G02850 AOP AT4G03090 PETC EMB2369 APR ATPC1 ATMSRB5 CLS APX4 ATNDK1 ATPD ATSPS4F AT4G10300 AT4G10450 AT4G10600 NDPK3 AT4G11120 AT4G11175 BASS5 AT4G12600 AT4G13170 CYP83A1 AT4G13840 ATSAHH1 The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. AT4G14200 PDE226 AT4G14360 NF-YB3 AT4G15000 CYP97B3 AT4G15430 CYP74B2 AtCLA1 AT4G16141 SPK1 ATOPT3 SVR7 AtBAM3 ATNS1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 AT4G17560 LIL3:1 AT4G17740 MYC4 AT4G18440 CH-42 RPL16B AG CYCT1;2 AK-HSDH AT4G19985 PTAC14 ATRAB8D AT4G20760 GHR1 PyrD ATRP1 sks4 APT3 PGR5-LIKE CCS52A1 AESP AT4G23670 AtDIR6 ATCSLG3 TAR2 AT4G24750 ATRBP31 AT4G24790 AT4G24830 AT4G24930 ACP4 CHLM SKS1 ATFIB2 B1 AT4G25870 AtFBA7 AT4G26660 AR192 VTC2 AT4G26860 FAD4 AtENODL2 AT4G27640 AT4G27700 MRL7 PSB28 GrxC5 emb2726 AT4G30020 ATHMA2 AHA2 AT4G30470 AT4G30800 FAD6 LRL2 AT4G31310 PGR3 PDE334 ATBT1 Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development. ATSDX1 AT4G32915 ATH1 ATCBL10 AtGLDP1 SQD1 AT4G33110 AT4G33400 ATHDA14 AT4G33500 AtHMAC6 AGD2 AT4G33760 CER4 AT4G34090 SEP1 EDA9 CLB6 ATCAP1 AT4G34555 BLH6 SQS2 AT4G34730 ASE2 MRL1 HCF244 AT4G35270 XCP1 ATSERAT3;2 MCA1 GATA7 BGAL3 ROT3 ATRL3 AT4G36640 AtGGPPS11 MAP1D ATHMA1 LBD39 SQE3 XTH7 SHM1 pde191 ATMYB4 ROC1 BBX19 AtFBA2 AT4G39040 APL3 ATCAD9 SAMC1 AT4G39630 ATIPS1 AKN2 AT4G39970 LAC10 SQD2 AT5G01260 TBL3 ATPDX1 ATOFP1 Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ABCI20 AtHsp70-2 AT-HSC70-1 AT5G02610 LCL1 AT5G02870 AT5G02940 LAC11 ADK2 AtNCS1 SBE2.2 PTL 54CP GYRB2 FD-GOGAT ATPAL3 SIR AT5G04840 ATNAS1 AtCHIL EMB2771 AtFAD8 ATEGY2 AT5G05790 2-Cys AT5G06770 AT5G07020 AT5G07090 ERL2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. SMC6A ATMYB29 ATRPA70B AT5G08050 HEMC AGAL2 PDE340 ATFLS1 AT5G08650 AT5G09240 AtPPa6 PMDH2 CESA5 ATMIPS3 AT5G10690 AT5G10920 APT5 HY5 OCP3 PPD5 AtMYB3R4 TINY2 AT5G12110 ATTERC Encodes a protein with similarity to REN1, a Rho GTPase activating protein. DiT1 ATGSL12 ABAP1 ATCYP20-2 AT5G13140 EMB3136 ABAR ATCHS CARAB-AK-LYS ATIMD1 ATDEF2 AO AT-P5C1 AT5G15050 AtENODL17 GAUT14 AtbZIP3 AT5G15910 AT5G16130 AtMYB43 EMB2247 UGT78D2 PSY RVE1 AtUGP2 AT5G17350 PSRP6 PCB2 BAM9 AGP25 ADG2 AT5G19240 AT5G19730 AtHBP5 ATMGD2 AT5G20700 ATCPN21 AT5G21060 AT5G21100 AT5G22340 anac090 AT5G22440 emb1211 EMB1030 IMS3 IMS2 CaS HCF136 AT5G23480 ATSIG5 SQE5 AT5G24155 ATSS1 LSU2 AT5G24760 CRY3 ESE3 AT5G25590 tny AT5G26010 AT5G26330 AT5G27390 MK AT5G27560 AT5G28500 ARRPS1 AT5G35170 AMOS1 ATGSL1 G6PD1 atylmg3 ARF8 CIR1 WSD1 ASF1B AT5G38520 APE1 CRR7 CDF2 OLI7 DEG8 UPM1 RPL27 RPS10B AT5G41760 AT5G42070 ATS NF-YC13 TZP NDH18 KCS20 SDG18 ABCI21 AT5G44520 MCM6 AT5G45280 ATFKBP13 AT5G45720 AT5G45775 CHL MCM3 BSK2 AT5G46580 bHLH071 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. NF-YB2 AMK2 ADG1 AT5G48740 ATPTS HCT OVA2 ATMYB111 MMT AT5G50100 CP31B FSD2 AT5G51110 AT5G51310 ATTPPA ATPGMP AT5G52010 OVA6 B2 AT5G52950 AT5G52970 AT5G53070 TRY ATPMEPCRF AtPLR1 AT5G53920 ATOMT1 PTAC15 RPL24 ANK AT5G55220 ATFTSZ1-1 CRR21 AT5G56040 AT5G56840 LUT2 CER3 APO2 NPL1 NdhN AT5G58330 AtcPT4 AT5G59740 AtRIBA3 AT5G59850 ATLAC17 AT5G60130 CLB4 AT5G60670 ATMYB34 ATRPA70D PDCB1 AT5G61170 AtMYB28 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AGL42 ATGT18 ANAC101 CDF1 AHA11 DXR ARR6 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. GSA1 AT5G63700 ATERS ATGCH AT5G64850 ASN2 ANNAT2 BAM1 ATLFNR1 AT5G66230 AT5G66470 ATDDM1 AT5G66770 ABA1 ICU2 EPS1 AT5G67200 MATK
GO:0019752 carboxylic acid metabolic process	BP	1.084e-76	AT1G01080 KCS1 ATGPAT4 POR KCS2 AT1G04420 LIP2 KAT1 emb2394 UGT1 AT1G06550 EMB2784 KCS3 ADT6 ABC1 CJD1 AT1G09310 CRB ATFD1 ADT1 ATGLX1 AT1G11860 ATSRS AT1G12800 GAPA-2 AT1G13650 LSMT-L AT1G14270 AT1G14345 AT1G15410 ATGA3OX1 AT1G15710 CP24 UP6 FUG1 ATSOT17 LHCA2*1 JMT ATLFNR2 DRT112 AT1G20950 AOR Cpn60beta4 PSAK ATIMD3 IMPL1 AK-HSDH CYP97A3 AT-IE PRK ACT1 AT1G32470 ABCI7 FdC2 PRPL11 AT1G33110 SHM7 GAPB ATCAO CP22 AT1G44920 GATB AT1G49380 LACS2 GDC1 bHLH115 AT1G51110 PSAH-2 ABA2 mMDH1 AT1G54220 AtTLP18.3 AT1G55260 AGP21 AT1G55360 AT1G56190 ATNAS4 AT1G56500 ATATP-PRT1 AT1G60000 ABC4 ACO2 FMO AT1G62780 ISPF BDG1 AT1G65230 FMO ATGSR2 AT1G66430 AT1G67690 PSBY AT1G68240 AT1G68260 CER6 PSRP3/1 PHYLLO AT1G70280 ATBCA4 AOAT2 AP40 EDA17 LPA3 ENO1 AT1G74070 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. emb2184 PETE1 ACR3 AT1G77090 LACS9 AT1G77670 ATGSTU20 LCR68 ATMEPCT EMB2761 AT2G05920 ATHNIR KCS9 AT2G17630 AAS PSB29 PDTPI ATSULA AtFBA1 AT2G21385 CYP79B3 ATMES7 ACL ATMES3 YCF37 AT2G24020 AT2G24060 AT2G24580 ATWRKY60 AT2G25530 AT2G25830 OVA4 PYL2 AtGLDP2 FDH ATCDPMEK AT2G27680 ADT3 PY ANTR1 AtFAD3 ATFC-II RPT2 AT2G30695 FIONA AT2G31670 AT2G33180 PRPL28 EDA3 GDCH AT2G35410 SKL2 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ADK AT2G37500 AT2G37660 PGP1 PnsL1 RCA ATCAMBP25 NTRC AT2G42130 AT2G42220 ATPPC2 ATLEUD1 AT2G43560 FAB2 UGT74F1 AT2G44040 CHL-CPN10 AT2G44920 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 ATCB5-C PHR2 AtCGS1 ATCYP38 ATBCA1 AK3 EMB2768 ATF1 VTC4 ATGSTF11 RGL2 ATMS2 GDH3 EMB3119 AT3G07270 AT3G07670 ATERDJ3A PTAC13 IDH-VI ADK1 OMR1 PAL4 AtFAD7 ATBSMT1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ATKRS-2 ESM1 AT3G14390 HEME1 mMDH2 AT3G15520 ADS3 MFP1 NDF4 AT3G16370 AAE7 RFC3 ECT6 MAT4 EMB1865 AT3G19030 AT3G19480 BCAT4 ATSAHH2 AT3G23940 HCF101 AT3G25805 ATPRX AT3G26450 GAPA CCB1 ATCM1 AAO2 LTPG2 AT3G44740 RPL9 AT3G47650 EDD DCF GSA2 ATBCAT-3 AT3G51140 ATG4 PSRP2 CP33 FTSZ2-2 CYP97C1 ATPAL2 AT3G54210 AT3G54400 OVA1 ATDFD SBPASE AT3G56010 AT3G56300 NAGK AT3G58140 IPMI1 GUN4 AT3G59780 AT3G59890 MTHFR1 AT3G60750 ATPIP1 ARATH;BSAS3;1 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 AT3G63510 ATT1 TROL AT4G02530 EMB3129 PETC EMB2369 APR ATPC1 ATMSRB5 ARGAH2 APX4 ATPD AT4G10300 CYP83A1 SHM4 ATSAHH1 ATECI3 CYP97B3 CYP74B2 IAGLU AtCLA1 ATNS1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17560 LIL3:1 AT4G18460 CH-42 AK-HSDH ATRAB8D AT4G23670 TAR2 AT4G24750 ATRBP31 AT4G24830 ACP4 CHLM B1 AtFBA7 VTC2 FAD4 PSB28 emb2726 AT4G30620 FAD6 PGR3 PDE334 ATSDX1 ATH1 AtGLDP1 ATHDA14 AGD2 AT4G33760 AT4G34090 SEP1 EDA9 CLB6 MRL1 HCF244 ATSERAT3;2 MCA1 SHM1 ROC1 AtFBA2 AT4G39040 ATIPS1 AKN2 SQD2 ATPDX1 AtHsp70-2 AT-HSC70-1 SBE2.2 54CP FD-GOGAT ATPAL3 SIR ATNAS1 AtFAD8 ATEGY2 2-Cys ERL2 HEMC AT5G08650 AtPPa6 PMDH2 AT5G10690 AT5G10920 PPD5 DiT1 ATCYP20-2 AT5G13140 CARAB-AK-LYS ATIMD1 ATDEF2 AT-P5C1 EMB2247 PSY PCB2 AGP25 AT5G19240 AT5G19760 ATMGD2 ATCPN21 AT5G21060 AT5G22340 EMB1030 IMS3 IMS2 CaS SHM2 ARRPS1 ATGSL1 G6PD1 OLI7 UPM1 AT5G41760 NDH18 KCS20 AT5G44520 ATFKBP13 CHL AT5G45950 AT5G46580 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. LIL3:2 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT5G47970 ADG1 OVA2 CP31B AT5G51110 AT5G51310 ATPGMP OVA6 B2 AT5G52970 RPL24 ANK AT5G55220 CER3 APO2 AT5G58330 CLB4 ATMYB34 PDCB1 DXR ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. GSA1 ATERS DCT ASN2 ATLFNR1 AT5G66470 ABA1 EPS1
GO:0006793 phosphorus metabolic process	BP	1.469e-76	AT1G01080 ATGPAT4 ATGPAT2 POR AT1G04420 LIP2 emb2394 LPA19 AtSLP1 ATNDI1 EMB2784 ATPCNA1 AT1G07700 ABC1 ATPPCK1 CRB AT1G09440 ATGSTU18 AT1G10850 AT1G10900 ATFD1 SCM AT1G11300 AT1G11410 ATSRS AT1G12460 AT1G12800 GAPA-2 AT1G13650 AT1G13730 LSMT-L PnsL2 AT1G14270 AT1G14345 CYCA2;3 CP24 NDF1 AT1G16080 HCF173 UP6 FUG1 GLYR2 AT1G18060 ATNACK1 NDF6 LHCA2*1 ATCLH1 ATLFNR2 DRT112 AT1G20950 ATPIP5K1 AT1G22630 AT1G22850 AT1G23410 AOR G6PD3 AtPERK10 Cpn60beta4 AT1G28395 AT1G28530 AT1G29700 AT1G29720 GlcNAc1pUT1 IMPL1 CYP97A3 AT-IE PRK AT1G32160 ACT1 AT1G32470 ABCI7 FdC2 GBSS1 PRPL11 AT1G33260 ATSERK2 RPL21C AT1G36280 GAPB ATMCM2 AT1G44920 CYCA3;2 CIPK17 RKL1 RACK1B AT1G49380 AT1G49580 FTSH1 GDC1 AT1G51110 AT1G51805 AT1G52220 PSAH-2 AtPERK15 PLDALPHA2 SPA4 ATMUM4 PK3AT AT1G54220 AtTLP18.3 AT1G54820 AT1G55200 ZKT AT1G55960 AT1G56500 AT1G56720 ZCF125 EMB3108 ABC4 ARP2 ATSCO1 AT1G62780 AT1G62950 AT1G63470 ISPF NDF2 AMT1;2 AT1G64880 AT1G65190 AT1G65230 AT1G66130 AT1G66330 pde194 AT1G66930 PSBY CSK AT1G68400 BBX14 CER6 PSRP3/1 STN7 FLN2 AT1G69730 Encodes a Protease inhibitor/seed storage/LTP family protein AOAT2 PGM2 CRR23 AT1G70985 AtRLP11 AT1G71810 HAB1 ATPIN1 ATMPK15 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NDH-O emb2184 AtGH9B7 LQY1 PETE1 AT1G76450 AT1G77090 AT1G79150 AT1G80640 NIP6 AT1G80870 APG2 AT2G01210 RPI2 AHK4 ATPAP8 ATMEPCT AT2G02780 AT2G03750 FLA7 AKN1 AT2G15020 AtPPa2 AT2G18890 AT2G19400 PSB29 PDTPI ATSULA BBX18 AtFBA1 AT2G21385 AT2G21530 ATRNR1 AT2G21960 ATIPS2 CYP79B3 NAPRT2 YCF37 eIFiso4G2 AT2G24060 PRPL35 ATWRKY60 AtENODL14 AT2G25220 AtDBP1 ARSK1 CYCB1;4 NPC2 ATCDPMEK AGO4 AT2G27060 AT2G27680 UXS6 PY ANTR1 MAPKKK14 PBCP ATFC-II AT2G30695 TCP10 ATCDT1A BBX25 CVL1 AtPFA-DSP2 AT2G33180 DAL PRPL28 AT2G34460 NF-YA4 EDA3 AT2G35260 GDCH AT2G35410 SKL2 AT2G36145 ATSIG6 AT2G37240 ADK AT2G37500 AT2G37660 PDX1L4 PGP1 RCA GLY1 SSL2 NTRC AT2G41890 AT2G42130 AT2G43560 FAB2 AT2G44920 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis SPA1 PSAP AtCCA1 PHR2 AT3G01060 AtSS2 ATCYP38 ATBCA1 LSF1 AT3G02640 EMB2768 ATF1 VTC4 ATGSTF11 NPC4 AT3G03770 EMB3119 AT3G04840 RPL18 ATSK12 ATYLMG1-1 AT3G07670 PIP5K6 PTAC13 AT3G10610 GYRA LSF2 CYC2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. AT3G12320 PGK1 AT3G12930 AT3G13120 ESM1 SPA3 AT3G15460 AT3G15520 ADS3 MFP1 NDF4 HCF107 CIPK1 RLK902 DAC RACK1C EMB1865 ATWNK6 AT3G19100 AT3G19300 AT3G20200 AT3G20260 PSBTN ATPURC GLTP3 AT3G22210 ATWNK2 ATSR2 ATTOPII AT3G23940 AT3G24190 HCF101 PLSP1 ATL5 AAPT2 AT3G25660 AT3G25805 AT3G26700 CCB1 ATTSO2 DEG1 AT3G28040 AT3G44620 ATHD2A RPL9 AT3G45430 PTAC16 DUT1 PEX11B AT3G47580 AT3G47650 AT3G48200 AT3G48420 GSA2 BAM2 CRK ICK2 AT3G50685 OEC33 IMK2 ATG4 PSRP2 CP33 FTSZ2-2 ELL1 CYP97C1 HCEF1 AT3G54210 PPL1 SBPASE AT3G56010 AT3G56290 AT3G56370 ADSS AT3G58140 GUN4 AT3G59780 CDS5 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 CSP41A AtcpRRF APG1 EMB3126 ANTR2 AT4G00895 AT4G00960 CRK41 TROL ATGPAT3 AT4G02420 AT4G02530 AT4G02630 EMB3129 PETC CRK40 ATPC1 ATKEA3 CLS APX4 ATNDK1 ATPD AT4G10300 NDPK3 CRK30 AT4G12600 CYP83A1 PDE226 CYP97B3 AtCLA1 SPK1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 AT4G17560 LIL3:1 AT4G17740 AT4G18440 CH-42 CYCT1;2 AK-HSDH PTAC14 GSO1 GHR1 PSBQ AT4G22730 PGR5-LIKE AESP CRK17 CRK21 AtDIR6 AT4G23740 3xHMG-box2 AT4G24750 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) AT4G24830 ACP4 CHLM SKS1 ATFIB2 AT4G25870 AtFBA7 AR192 AT4G26860 FAD4 AT4G27700 PSB28 AT4G28740 emb2726 ATHMA2 AHA2 FAD6 AT4G31310 AtENODL15 PGR3 PDE334 ATBT1 PERK14 ATSDX1 ATH1 AtGLDP1 AT4G33400 ATHDA14 AT4G33500 AtHMAC6 AT4G34090 SEP1 CLB6 ASE2 MRL1 HCF244 MCA1 ATHMA1 SQE3 AT4G38520 ROC1 AtFBA2 AT4G39040 SAMC1 ATIPS1 AKN2 SQD2 AT5G01260 ATPDX1 ATCIPK14 AT5G01890 STN8 AT5G02760 AT5G02870 AT5G03140 SBE2.2 54CP ATEGY2 2-Cys AT5G07090 ERL2 AT5G08050 HEMC PDE340 AT5G08650 AtPPa6 PMDH2 AT5G10020 ATMIPS3 AT5G10690 AT5G10920 CIPK5 APT5 PPD5 EMB3136 AT5G14210 ATDEF2 AO AtENODL17 AT5G15910 AT5G17160 ENH1 PSY AtUGP2 AT5G17670 PCB2 EMB3013 ADG2 ATCPN21 AT5G21222 CaS HCF136 ATSIG5 PGL5 AT5G27390 MK ARRPS1 AT5G35170 ATGSL1 G6PD1 atylmg3 AT5G37790 AT5G38520 OLI7 CRK42 CYCA3;1 NDH18 AT5G44520 AT5G44680 ATFKBP13 CHL BSK2 PYL1 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AMK2 ADG1 HINT3 AT5G48740 AT5G48790 AT5G50100 CP31B AT5G51110 AT5G51560 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 THE1 AHL CRLK1 RPL24 ANK AT5G55220 ATFTSZ1-1 AT5G55520 AT5G56040 AT5G56890 AT5G57610 APO2 NPL1 NdhN CLB4 AT5G61350 AT5G61570 AHA11 DXR ATNDPK2 AT5G63700 AT5G64850 ANNAT2 BAM1 ATLFNR1 AT5G66470 ATDDM1 ABA1 AT5G67200 RLK
GO:0009240 isopentenyl diphosphate biosynthetic pro...	BP	1.248e-74	AT1G01080 POR AT1G04420 LIP2 emb2394 EMB2784 ABC1 CRB AT1G12800 AT1G13650 LSMT-L AT1G14270 AT1G14345 FUG1 LHCA2*1 AOR Cpn60beta4 CYP97A3 ACT1 FdC2 PRPL11 GAPB AT1G44920 AT1G49380 GDC1 AtTLP18.3 AT1G56500 ABC4 AT1G62780 ISPF AT1G65230 CER6 PSRP3/1 AT1G74070 emb2184 AT1G77090 ATMEPCT PSB29 PDTPI ATSULA AtFBA1 AT2G21385 CYP79B3 YCF37 AT2G24060 ATCDPMEK AT2G27680 PY ATFC-II AT2G30695 PRPL28 EDA3 AT2G35410 SKL2 ATSIG6 AT2G37660 NTRC AT2G42130 AT2G43560 FAB2 AT2G44920 PHR2 ATCYP38 ATF1 ATGSTF11 EMB3119 AT3G07670 PTAC13 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 AT3G15520 ADS3 MFP1 NDF4 EMB1865 HCF101 AT3G25805 CCB1 RPL9 AT3G47650 ATG4 PSRP2 CP33 CYP97C1 AT3G54210 SBPASE AT3G56010 AT3G58140 AT3G59780 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 TROL AT4G02530 EMB3129 ATPC1 APX4 ATPD AT4G10300 CYP83A1 CYP97B3 AtCLA1 AT4G17560 LIL3:1 CH-42 AT4G24750 ACP4 CHLM PSB28 emb2726 FAD6 PGR3 ATH1 AtGLDP1 ATHDA14 AT4G34090 SEP1 CLB6 MRL1 HCF244 AtFBA2 AT4G39040 SQD2 SBE2.2 54CP ATEGY2 HEMC AT5G08650 PMDH2 AT5G10690 PPD5 ATDEF2 PSY PCB2 ATCPN21 CaS ARRPS1 G6PD1 NDH18 ATFKBP13 CHL ADG1 CP31B ATPGMP AT5G52970 RPL24 AT5G55220 CLB4 DXR ATNDPK2 AT5G66470
GO:0019288 isopentenyl diphosphate biosynthetic pro...	BP	1.248e-74	AT1G01080 POR AT1G04420 LIP2 emb2394 EMB2784 ABC1 CRB AT1G12800 AT1G13650 LSMT-L AT1G14270 AT1G14345 FUG1 LHCA2*1 AOR Cpn60beta4 CYP97A3 ACT1 FdC2 PRPL11 GAPB AT1G44920 AT1G49380 GDC1 AtTLP18.3 AT1G56500 ABC4 AT1G62780 ISPF AT1G65230 CER6 PSRP3/1 AT1G74070 emb2184 AT1G77090 ATMEPCT PSB29 PDTPI ATSULA AtFBA1 AT2G21385 CYP79B3 YCF37 AT2G24060 ATCDPMEK AT2G27680 PY ATFC-II AT2G30695 PRPL28 EDA3 AT2G35410 SKL2 ATSIG6 AT2G37660 NTRC AT2G42130 AT2G43560 FAB2 AT2G44920 PHR2 ATCYP38 ATF1 ATGSTF11 EMB3119 AT3G07670 PTAC13 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 AT3G15520 ADS3 MFP1 NDF4 EMB1865 HCF101 AT3G25805 CCB1 RPL9 AT3G47650 ATG4 PSRP2 CP33 CYP97C1 AT3G54210 SBPASE AT3G56010 AT3G58140 AT3G59780 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 TROL AT4G02530 EMB3129 ATPC1 APX4 ATPD AT4G10300 CYP83A1 CYP97B3 AtCLA1 AT4G17560 LIL3:1 CH-42 AT4G24750 ACP4 CHLM PSB28 emb2726 FAD6 PGR3 ATH1 AtGLDP1 ATHDA14 AT4G34090 SEP1 CLB6 MRL1 HCF244 AtFBA2 AT4G39040 SQD2 SBE2.2 54CP ATEGY2 HEMC AT5G08650 PMDH2 AT5G10690 PPD5 ATDEF2 PSY PCB2 ATCPN21 CaS ARRPS1 G6PD1 NDH18 ATFKBP13 CHL ADG1 CP31B ATPGMP AT5G52970 RPL24 AT5G55220 CLB4 DXR ATNDPK2 AT5G66470
GO:0046490 isopentenyl diphosphate metabolic proces...	BP	1.248e-74	AT1G01080 POR AT1G04420 LIP2 emb2394 EMB2784 ABC1 CRB AT1G12800 AT1G13650 LSMT-L AT1G14270 AT1G14345 FUG1 LHCA2*1 AOR Cpn60beta4 CYP97A3 ACT1 FdC2 PRPL11 GAPB AT1G44920 AT1G49380 GDC1 AtTLP18.3 AT1G56500 ABC4 AT1G62780 ISPF AT1G65230 CER6 PSRP3/1 AT1G74070 emb2184 AT1G77090 ATMEPCT PSB29 PDTPI ATSULA AtFBA1 AT2G21385 CYP79B3 YCF37 AT2G24060 ATCDPMEK AT2G27680 PY ATFC-II AT2G30695 PRPL28 EDA3 AT2G35410 SKL2 ATSIG6 AT2G37660 NTRC AT2G42130 AT2G43560 FAB2 AT2G44920 PHR2 ATCYP38 ATF1 ATGSTF11 EMB3119 AT3G07670 PTAC13 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 AT3G15520 ADS3 MFP1 NDF4 EMB1865 HCF101 AT3G25805 CCB1 RPL9 AT3G47650 ATG4 PSRP2 CP33 CYP97C1 AT3G54210 SBPASE AT3G56010 AT3G58140 AT3G59780 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 TROL AT4G02530 EMB3129 ATPC1 APX4 ATPD AT4G10300 CYP83A1 CYP97B3 AtCLA1 AT4G17560 LIL3:1 CH-42 AT4G24750 ACP4 CHLM PSB28 emb2726 FAD6 PGR3 ATH1 AtGLDP1 ATHDA14 AT4G34090 SEP1 CLB6 MRL1 HCF244 AtFBA2 AT4G39040 SQD2 SBE2.2 54CP ATEGY2 HEMC AT5G08650 PMDH2 AT5G10690 PPD5 ATDEF2 PSY PCB2 ATCPN21 CaS ARRPS1 G6PD1 NDH18 ATFKBP13 CHL ADG1 CP31B ATPGMP AT5G52970 RPL24 AT5G55220 CLB4 DXR ATNDPK2 AT5G66470
GO:0006796 phosphate-containing compound metabolic ...	BP	2.724e-74	AT1G01080 ATGPAT4 ATGPAT2 POR AT1G04420 LIP2 emb2394 LPA19 AtSLP1 ATNDI1 EMB2784 ATPCNA1 AT1G07700 ABC1 ATPPCK1 CRB AT1G09440 ATGSTU18 AT1G10850 AT1G10900 ATFD1 SCM AT1G11300 AT1G11410 ATSRS AT1G12460 AT1G12800 GAPA-2 AT1G13650 AT1G13730 LSMT-L PnsL2 AT1G14270 AT1G14345 CYCA2;3 CP24 NDF1 AT1G16080 HCF173 UP6 FUG1 GLYR2 AT1G18060 ATNACK1 NDF6 LHCA2*1 ATCLH1 ATLFNR2 DRT112 ATPIP5K1 AT1G22630 AT1G22850 AT1G23410 AOR G6PD3 AtPERK10 Cpn60beta4 AT1G28395 AT1G28530 AT1G29700 AT1G29720 GlcNAc1pUT1 IMPL1 CYP97A3 AT-IE PRK AT1G32160 ACT1 AT1G32470 ABCI7 FdC2 GBSS1 PRPL11 AT1G33260 ATSERK2 RPL21C AT1G36280 GAPB ATMCM2 AT1G44920 CYCA3;2 CIPK17 RKL1 RACK1B AT1G49380 AT1G49580 FTSH1 GDC1 AT1G51110 AT1G51805 AT1G52220 PSAH-2 AtPERK15 PLDALPHA2 SPA4 ATMUM4 PK3AT AtTLP18.3 AT1G54820 AT1G55200 ZKT AT1G55960 AT1G56500 AT1G56720 ZCF125 EMB3108 ABC4 ARP2 ATSCO1 AT1G62780 AT1G62950 AT1G63470 ISPF NDF2 AMT1;2 AT1G64880 AT1G65190 AT1G65230 AT1G66130 AT1G66330 pde194 AT1G66930 PSBY CSK AT1G68400 BBX14 CER6 PSRP3/1 STN7 FLN2 AT1G69730 Encodes a Protease inhibitor/seed storage/LTP family protein AOAT2 PGM2 CRR23 AT1G70985 AtRLP11 AT1G71810 HAB1 ATPIN1 ATMPK15 AT1G74070 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NDH-O emb2184 LQY1 PETE1 AT1G76450 AT1G77090 AT1G79150 AT1G80640 NIP6 AT1G80870 APG2 AT2G01210 RPI2 AHK4 ATPAP8 ATMEPCT AT2G02780 AT2G03750 AKN1 AT2G15020 AtPPa2 AT2G18890 AT2G19400 PSB29 PDTPI ATSULA BBX18 AtFBA1 AT2G21385 AT2G21530 ATRNR1 AT2G21960 ATIPS2 CYP79B3 NAPRT2 YCF37 eIFiso4G2 AT2G24060 PRPL35 ATWRKY60 AtENODL14 AT2G25220 AtDBP1 ARSK1 CYCB1;4 NPC2 ATCDPMEK AGO4 AT2G27060 AT2G27680 UXS6 PY ANTR1 MAPKKK14 PBCP ATFC-II AT2G30695 TCP10 ATCDT1A BBX25 CVL1 AtPFA-DSP2 AT2G33180 DAL PRPL28 AT2G34460 NF-YA4 EDA3 AT2G35260 GDCH AT2G35410 SKL2 AT2G36145 ATSIG6 AT2G37240 ADK AT2G37500 AT2G37660 PDX1L4 PGP1 RCA GLY1 SSL2 NTRC AT2G41890 AT2G42130 AT2G43560 FAB2 AT2G44920 SPA1 PSAP AtCCA1 PHR2 AT3G01060 AtSS2 ATCYP38 ATBCA1 LSF1 AT3G02640 EMB2768 ATF1 VTC4 ATGSTF11 NPC4 AT3G03770 EMB3119 AT3G04840 RPL18 ATSK12 ATYLMG1-1 AT3G07670 PIP5K6 PTAC13 AT3G10610 GYRA LSF2 CYC2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. AT3G12320 PGK1 AT3G12930 AT3G13120 ESM1 SPA3 AT3G15460 AT3G15520 ADS3 MFP1 NDF4 HCF107 CIPK1 RLK902 DAC RACK1C EMB1865 ATWNK6 AT3G19100 AT3G19300 AT3G20200 PSBTN ATPURC GLTP3 AT3G22210 ATWNK2 ATSR2 ATTOPII AT3G23940 AT3G24190 HCF101 PLSP1 ATL5 AAPT2 AT3G25660 AT3G25805 AT3G26700 CCB1 ATTSO2 DEG1 AT3G28040 AT3G44620 ATHD2A RPL9 AT3G45430 PTAC16 DUT1 PEX11B AT3G47580 AT3G47650 AT3G48200 AT3G48420 GSA2 BAM2 CRK ICK2 AT3G50685 OEC33 IMK2 ATG4 PSRP2 CP33 FTSZ2-2 CYP97C1 HCEF1 AT3G54210 PPL1 SBPASE AT3G56010 AT3G56290 AT3G56370 ADSS AT3G58140 GUN4 AT3G59780 CDS5 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 CSP41A AtcpRRF APG1 EMB3126 ANTR2 AT4G00895 AT4G00960 CRK41 TROL ATGPAT3 AT4G02420 AT4G02530 AT4G02630 EMB3129 PETC CRK40 ATPC1 ATKEA3 CLS APX4 ATNDK1 ATPD AT4G10300 NDPK3 CRK30 AT4G12600 CYP83A1 PDE226 CYP97B3 AtCLA1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 AT4G17560 LIL3:1 AT4G17740 AT4G18440 CH-42 CYCT1;2 AK-HSDH PTAC14 GSO1 GHR1 PSBQ AT4G22730 PGR5-LIKE AESP CRK17 CRK21 AT4G23740 3xHMG-box2 AT4G24750 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) AT4G24830 ACP4 CHLM SKS1 ATFIB2 AtFBA7 AR192 AT4G26860 FAD4 AT4G27700 PSB28 AT4G28740 emb2726 ATHMA2 AHA2 FAD6 AT4G31310 PGR3 PDE334 ATBT1 PERK14 ATSDX1 ATH1 AtGLDP1 AT4G33400 ATHDA14 AT4G33500 AtHMAC6 AT4G34090 SEP1 CLB6 ASE2 MRL1 HCF244 MCA1 ATHMA1 SQE3 AT4G38520 ROC1 AtFBA2 AT4G39040 SAMC1 ATIPS1 AKN2 SQD2 AT5G01260 ATPDX1 ATCIPK14 AT5G01890 STN8 AT5G02760 AT5G02870 AT5G03140 SBE2.2 54CP ATEGY2 2-Cys AT5G07090 ERL2 AT5G08050 HEMC PDE340 AT5G08650 AtPPa6 PMDH2 AT5G10020 ATMIPS3 AT5G10690 AT5G10920 CIPK5 APT5 PPD5 EMB3136 AT5G14210 ATDEF2 AO AT5G15910 AT5G17160 ENH1 PSY AtUGP2 AT5G17670 PCB2 EMB3013 ADG2 ATCPN21 AT5G21222 CaS HCF136 ATSIG5 PGL5 AT5G27390 MK ARRPS1 AT5G35170 ATGSL1 G6PD1 atylmg3 AT5G37790 AT5G38520 OLI7 CRK42 CYCA3;1 NDH18 AT5G44520 AT5G44680 ATFKBP13 CHL BSK2 PYL1 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AMK2 ADG1 HINT3 AT5G48740 AT5G48790 AT5G50100 CP31B AT5G51110 AT5G51560 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 THE1 AHL CRLK1 RPL24 ANK AT5G55220 ATFTSZ1-1 AT5G55520 AT5G56040 AT5G56890 AT5G57610 APO2 NPL1 NdhN CLB4 AT5G61350 AT5G61570 AHA11 DXR ATNDPK2 AT5G63700 AT5G64850 BAM1 ATLFNR1 AT5G66470 ATDDM1 ABA1 AT5G67200 RLK
GO:0006733 oxidoreduction coenzyme metabolic proces...	BP	1.699e-70	POR LIP2 emb2394 LPA19 ABC1 CRB ATGSTU18 ATFD1 AT1G12800 PnsL2 AT1G14345 NDF1 AT1G16080 GLYR2 AT1G18060 NDF6 AT1G19140 LHCA2*1 ATLFNR2 DRT112 AT1G22630 AOR G6PD3 PRK AT1G32470 FdC2 GAPB FTSH1 GDC1 AT1G51110 ATSCO1 AT1G62780 ISPF NDF2 AT1G65230 CER6 CRR23 emb2184 LQY1 AT1G76450 AT1G77090 RPI2 ATMEPCT ATSULA AtFBA1 AT2G21530 AT2G21960 CYP79B3 NAPRT2 YCF37 PRPL35 AT2G27680 PY ATFC-II AT2G33180 EDA3 GDCH SKL2 AT2G36145 AT2G43560 FAB2 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATGSTF11 EMB3119 PGK1 ESM1 MFP1 NDF4 DAC AT3G22210 HCF101 DEG1 PTAC16 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G56010 GUN4 AT3G59780 AT3G61870 CYP20-3 CSP41A AtcpRRF EMB3126 ANTR2 TROL AT4G02530 PETC ATPC1 APX4 ATPD CYP83A1 AtCLA1 LIL3:1 PGR5-LIKE AtFBA7 AT4G26860 AT4G27700 AT4G28740 FAD6 PGR3 PDE334 ATH1 AtGLDP1 ATHDA14 AT4G34090 SEP1 AtFBA2 ATPDX1 SBE2.2 2-Cys AT5G08050 HEMC AT5G08650 PMDH2 AO ENH1 PCB2 ADG2 CaS HCF136 PGL5 ARRPS1 ATGSL1 G6PD1 atylmg3 AT5G44520 Encodes the mitochondrial ATP synthase subunit delta. ADG1 CP31B AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 AT5G53920 NdhN AtcPT4 CLB4 DXR ATLFNR1
GO:0044238 primary metabolic process	BP	3.185e-70	LHY AT1G01080 KCS1 ASG4 ATGPAT4 ATSBT1.1 ATGPAT2 GATL5 ATCSLD5 ATWEE1 AtD27 AtBE2 POR ATBARD1 AT1G04040 SDG13 KCS2 AXR3 AT1G04420 AT1G04480 PDLP2 BDL LIP2 AT1G04680 KAT1 CTF18 ATPDI10 AT1G05140 emb2394 LPA19 UGT1 BT3 AT1G05870 ATNTH2 AT1G06250 AT1G06360 FTSH8 AT1G06550 CCR2 EMB2784 ATPCNA1 KCS3 ATLIG1 ADT6 AT1G08280 ABC1 CJD1 ATPPCK1 emb2411 BIP3 AT1G09310 CRB AT1G09390 AT1G09440 AT1G09590 AT1G09690 iPGAM1 ATGSTU18 AT1G10585 AT1G10640 AT1G10740 Z-ISO AT1G10850 AT1G10900 ATRECQ4A ATFD1 SCM CRR22 AT1G11300 AT1G11410 ATPMEPCRA AT1G11670 ATSS3 ADT1 ATGLX1 AT1G11860 ATSRS ATNRT1 AT1G12244 SUMM2 PHR1 AT1G12460 AT1G12500 AT1G12800 GAPA-2 AT1G13130 AT1G13650 AT1G13730 LSMT-L PnsL2 AT1G14270 AT1G14345 AtMYB124 ATWHY1 AT1G14460 AT1G14600 AT1G15165 AT1G15410 ATECB2 ATGA3OX1 CYCA2;3 AT1G15710 CP24 AT1G15930 AT1G15970 NDF1 AT1G16080 HCF173 UP6 FUG1 GLYR2 AT1G18060 AT1G18090 AT1G18170 ATNACK1 AT1G18440 AT1G18485 AT1G18540 ATSOT17 NDF6 LHCA2*1 BES1 AT1G19490 ATCLH1 AT1G19680 AtGH9B5 ATLFNR2 DRT112 AT1G20810 AT1G20950 ATOGG1 LYM1 ATPIP5K1 AGL87 AT1G22630 AT1G23030 AT1G23410 AOR MLP423 GATL8 G6PD3 AT1G25510 AtPERK10 Cpn60beta4 BGLU40 AT1G26790 AT1G26880 AtHB23 ATHB54 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. AT1G27120 SPL11 AT1G27480 SCPL45 AT1G28395 AT1G28530 SRD2 AT1G28570 AT1G28610 AT1G28660 ARAB-1 AT1G29660 AT1G29720 PSAK AT1G30600 GlcNAc1pUT1 ATIMD3 IMPL1 AK-HSDH CYP97A3 AT-IE AT1G31920 STRS1 PRK ATPRR1 AT1G32160 ACT1 AT1G32470 ABCI7 FdC2 AT1G32730 GBSS1 PRPL11 AT1G33110 AT1G33260 AtGXMT1 ATSERK2 AT1G35340 At-FANCM AT1G35560 RPL21C AT1G36280 SHM7 AT1G36390 ATNR2 AT1G41880 GAPB Aty2 ATCAO CP22 ATMCM2 AT1G44920 BGLU1 ATTLL1 Lhca5 CYCA3;2 DYW1 AT1G48100 CIPK17 EMB3105 RKL1 GATB RACK1B AT1G49010 AT1G49380 LACS2 AT1G49580 ATPREP2 AtCXE5 AT1G49740 FTSH1 POLGAMMA2 GDC1 bHLH115 AT1G51080 AT1G51110 Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols. 4CL.1 AT1G51805 AT1G52220 PSAH-2 AtPERK15 ABA2 AT1G52510 PLDALPHA2 ATRBL5 SPA4 mMDH1 ATMUM4 PK3AT AT1G54050 ABCD2 AT1G54500 AtTLP18.3 AT1G54790 AT1G54820 AT1G55140 AT1G55200 AT1G55260 AGP21 AT1G55360 NDF5 ZKT CPN60B AT1G55690 HAC04 AT1G56190 AT1G56500 AT1G56670 AT1G56720 AtMYB50 AT1G57660 AT1G57770 ATATP-PRT1 AT1G58170 ATXYN1 RXW8 ZCF125 CRR28 AT1G59970 EMB3108 AT1G60000 BGLU5 BGLU6 AT1G60590 ABC4 AT1G61190 AT1G61300 ARP2 ACO2 FMO AT1G62630 BETA-VPE ATSCO1 AT1G62780 AT1G62950 AT1G63470 ISPF AtGH9C2 REB1 AT1G64500 AT1G64510 BDG1 AT1G64680 NDF2 RPOD1 AT1G64880 AT1G65070 AT1G65190 AT1G65230 ATHEX1 FMO AT1G66180 ATGSR2 AtMYB20 AT1G66430 pde194 AT1G66930 GDPDL1 AT1G67690 PSBY CSK AT1G68240 AT1G68260 AT1G68400 BBX14 CER6 PSRP3/1 AT1G68600 AT1G68660 PHO1;H1 STN7 PHYLLO FLN2 AT1G69730 AT1G70000 GATL9 AXY4 Encodes a Protease inhibitor/seed storage/LTP family protein AT1G70280 PG2 AT1G70550 AOAT2 AT1G70600 PGM2 CRR23 ATPIN3 AtGDPD4 AT1G71810 ANAC030 AT1G72270 AP40 AT1G72430 HAB1 EDA17 LPA3 AT1G73110 APC13 AT1G73390 ATPIN1 AT1G73600 AT1G73650 ATMPK15 BBX16 ENO1 AT1G74070 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NDH-O RPS9 AT1G75090 AT1G75150 emb2184 AtGH9B7 LQY1 PETE1 AMY2 AT1G76450 ACR3 AT1G77090 LACS9 AT1G77670 AT1G77750 AT1G77940 AT1G78010 AT1G78060 ATGSTU20 AT1G78995 AT1G79150 EMB1047 AT1G79630 CS17 AT1G80030 AT1G80640 AT1G80850 AT1G80870 APG2 AT2G01210 RPI2 ATPIN4 AHK4 LCR68 ATMEPCT ATWHY3 AT2G02780 ARPN OTP85 AT2G03020 AT2G03750 AtHsp90.5 AIR3 FLA7 AT2G04790 EMB2761 AT2G05920 MCM5 AT2G13440 AT2G14285 AKN1 ATHNIR KCS9 BLH7 AT2G17630 AT2G17972 AT2G18890 AT2G19400 ATPRMT1A rps15ab AAS AT2G20450 MEF21 PSB29 PDTPI ATSULA BBX18 AtFBA1 XK-1 AT2G21385 AT2G21530 ATRL2 ATRNR1 AT2G21860 AT2G21960 ATIPS2 CYP79B3 IAA8 scpl10 SCPL9 CLF NAPRT2 ATMES3 YCF37 AT2G23690 scpl23 eIFiso4G2 AT2G24060 PRPL35 PDE319 HHP3 AT2G24170 AT2G24350 AT2G24580 ATWRKY60 AtENODL14 AT2G25220 AtDBP1 ESE2 AT2G25830 OVA4 PYL2 AtGLDP2 CYP711A1 FDH ARSK1 AT2G26500 CYCB1;4 NPC2 BASS2 ATCDPMEK AGO4 AT2G27060 AT2G27360 AT2G27420 AT2G27680 AT2G27710 ADT3 CH-CPN60A ARF10 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 UXS6 ATRBL1 AT2G29180 AT2G29360 PY AtFAD3 MAPKKK14 PBCP AT2G30320 ATFC-II TCL2 RPT2 AT2G30695 TCP10 FIONA ATERF15 ATCDT1A BBX25 AT2G31670 MRL7-L CVL1 AT2G32060 ATOFP16 PRORP1 BAM6 ARASP ATCSLB03 ATCSLB04 AT2G32640 ATCB5-B ATSUMO5 ATPDI9 ATCOP1 AtGH9B8 AT2G33180 DAL PRPL28 scpl46 BUBR1 GALS1 AT2G33735 CYP710A2 AtCCP1 HMR ATHB-14 NF-YA4 EDA3 AT2G35260 GDCH AT2G35410 SKL2 ATERF38 AT2G35840 NHL12 AT2G36145 RPL24A AT2G36630 DOGT1 MAT3 ATSIG6 ATPAL1 ADK ATRPS5B AT2G37500 AT2G37600 AS1 AT2G37660 AtHBP2 ATCAX1 TBL34 GAUT7 AT2G38730 AT2G39240 SNZ PGP1 ATRPL23A PnsL1 AT2G39670 LHCB4.3 AT2G40200 ETG1 ARR16 GLY1 AT2G41050 ARR8 AT2G41330 NTRC AT2G41890 AT2G42130 AT2G42220 ATPPC2 AT2G42980 NPG1 ATLEUD1 AT2G43560 FAB2 UGT74F1 AT2G44040 AT2G44230 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 AT2G46250 SPA1 ATCB5-C PSAP AtCCA1 PHR2 AtENODL16 AtCGS1 AtSS2 PnsL3 ATCYP38 ATBCA1 LSF1 AT3G01660 AT3G01810 AK3 scpl25 AT3G02640 EMB2768 ATF1 AT3G02820 PNT1 VTC4 ATGSTF11 AtUGP1 RGL2 NPC4 AT3G03770 ATMS2 GDH3 ATLTL1 emb2458 SDG31 EMB3119 AT3G04840 AT3G05180 ATRAD9 AT3G05560 RPL18 ATSK12 ATSFR2 AT3G06680 TRX AT3G07110 AT3G07270 ATYLMG1-1 AT3G07670 PIP5K6 AT3G08600 AT3G08740 ATERDJ3A AT3G09050 AT3G09200 PTAC13 AT3G09580 LCL5 IDH-VI ADK1 OMR1 AT3G10060 GYRB1 AT3G10310 PAL4 AT3G10610 GYRA AT3G10760 AT3G10840 LSF2 AtFAD7 AT3G11510 CYC2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST AT3G11964 ACT11 PGK1 AT3G12930 AT3G13000 AT3G13120 AT3G13180 Cpn60beta2 ATKRS-2 AT3G13510 AT3G13560 ESM1 AT3G14220 AT3G14330 AT3G14390 HEME1 mMDH2 PRPS20 SPA3 AT3G15460 AT3G15520 ADS3 MFP1 AT3G16080 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. EMB2083 AT3G16370 AAE7 HCF107 RFC3 ECT6 MAT4 CIPK1 HYH AT3G17830 RLK902 DAC WOX1 EMB1270 RACK1C AT3G18280 EMB1865 ATUNG ATPUB29 ATWNK6 AtTic62 AT3G19030 AT3G19100 ATPREP1 AT3G19300 AT3G19370 AT3G19480 BCAT4 AT3G20010 AT3G20150 AT3G20200 AT3G20260 PSBTN ATPURC AtBBX32 4CL2 GLTP3 ABCI12 BBX31 AT3G22150 AT3G22210 ATWNK2 ATTSO1 ATSR2 AT3G23090 bHLH34 AT3G23390 AT3G23510 AT3G23530 XTH16 ATSAHH2 ATTOPII AT3G23930 AT3G23940 AT3G24190 HCF101 PLSP1 AFH1 ATL5 AAPT2 AT3G25660 AT3G25700 AT3G25805 CRF11 RPL15 ATPRX AT3G26085 AT3G26450 ORF02 GAPA AT3G26700 CCB1 DRB3 ATTSO2 GHS1 AT3G27180 AT3G27200 AT3G27540 AT3G27640 EMB3123 RPL12 RPL12-C DEG1 AT3G28040 AT3G28760 ATCM1 CHR38 AAO2 LTPG2 anac061 AT3G44590 AT3G44620 AT3G44740 ATHD2A RPL9 AT3G45030 AT3G45430 ATMYB48 PTAC16 DUT1 AT3G47070 PEX11B AT3G47580 AT3G47650 AT3G47830 EDD AT3G48200 AT3G48420 AT3G48425 AT3G48440 AT3G48460 GSA2 AT3G48830 ATBBC1 DMS3 AT3G49640 BAM2 ATBCAT-3 AT3G49810 CRK ICK2 AT3G50685 OEC33 AT3G51140 AT3G51280 IMK2 ATG4 AT3G51950 PSRP2 ATSPP2 CP33 FTSZ2-2 AT3G52900 ELL1 AT3G52960 CYP97C1 ATPAL2 AT3G53680 ATGCP4 PYRR HCEF1 AT3G54210 AT3G54390 AT3G54400 AT3G54750 GSTL2 PDE329 PPL1 ATTSC13 OVA1 ATDFD SBPASE AT3G56010 UGP3 AT3G56230 AT3G56290 AT3G56300 AT3G56370 PSRP5 BHLH038 BHLH039 AT3G57010 ARR9 BPG2 PrfB3 AT3G57400 NAGK ADSS GIS AT3G58140 IPMI1 GUN4 ATRAD21.2 AT3G59780 AT3G59890 MTHFR1 AT3G60245 CDS5 ATHAM2 AT3G60750 ATPIP1 ARATH;BSAS3;1 AT3G61870 AT3G61950 CYP20-3 UBQ5 CP12 APG3 ATIPT3 CSP41A AtcpRRF PLA OTP86 APG1 EMB3126 AT3G63510 AT3G66652 BRCA2(IV) UNE10 ATHAM3 AT4G00165 ATT1 ANTR2 BAM2 AHDP AT4G00810 AT4G00895 MEE47 AT4G00960 CRK41 TROL GT72B1 ATGPAT3 MCM7 AtGH9B13 AT4G02420 AT4G02530 AT4G02630 EMB3129 AT4G03090 PETC EMB2369 CRK40 APR ATPC1 ATMSRB5 ATKEA3 CLS ORL1 ARGAH2 APX4 ATNDK1 CRRJ ATPD ATSPS4F AT4G10300 AT4G10450 AT4G10600 NDPK3 AT4G11100 AT4G11120 AT4G11175 CRK30 AT4G12600 AT4G12830 scpl20 EPFL9 AT4G13170 AT4G13550 CYP83A1 SHM4 ATSAHH1 AtPRD1 AT4G14200 PDE226 AT4G14360 ATECI3 NF-YB3 AT4G15000 CYP97B3 AT4G15430 CYP74B2 IAGLU AtCLA1 AT4G15640 AT4G16141 SPK1 ATOPT3 SVR7 AtBAM3 ATNS1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 AT4G17560 LIL3:1 AT4G17740 MYC4 DEG5 AT4G18440 AT4G18460 CH-42 RPL16B AT4G18810 AG AT4G18970 CMT2 PAM68 CYCT1;2 AK-HSDH AT4G19985 PTAC14 GSO1 ATRAB8D AT4G20760 GHR1 ATRP1 PSBQ AT4G21650 BGLU47 AT4G21770 sks4 BGLU3 APT3 AT4G22730 PGR5-LIKE CCS52A1 AESP CRK17 CRK21 AT4G23670 AtDIR6 AT4G23740 3xHMG-box2 ATCSLG3 AT4G24090 cpHsc70-1 AT4G24350 AT4G24750 ATRBP31 AT4G24790 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) AT4G24830 ACP4 CHLM SKS1 AT4G25290 ATFIB2 B1 AT4G25870 AtFBA7 AT4G26660 AR192 AT4G26830 VTC2 FAD4 AT4G27640 AT4G27700 EMB1923 MRL7 PSB28 AT4G28740 AT4G28780 emb2726 AT4G29520 AT4G30020 ATHMA2 AHA2 AT4G30330 BRS1 AT4G30800 scpl29 AT4G30825 FAD6 LRL2 PGR3 PDE334 ATBT1 Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development. PERK14 ATSDX1 AT4G32915 ATH1 ATCBL10 AtGLDP1 SQD1 AT4G33110 AT4G33400 ATHDA14 AT4G33500 AtHMAC6 AGD2 AT4G33760 AT4G33810 AT4G34090 SEP1 EDA9 CLB6 ATCAP1 AT4G34555 BLH6 SQS2 AT4G34730 ASE2 MRL1 CAT2 HCF244 AT4G35270 XCP1 ATSERAT3;2 AT4G35880 MCA1 AT4G36190 GATA7 BGAL3 ROT3 ATRL3 AtGGPPS11 MAP1D ATHMA1 LBD39 SQE3 XTH7 SHM1 pde191 AT4G38520 ATMYB4 ROC1 BBX19 AtFBA2 AT4G39040 APL3 SAMC1 AT4G39630 FKBP16-2 ATIPS1 AKN2 AT4G39960 AT5G01075 LAC10 SQD2 AT5G01260 TBL3 ATPDX1 AT5G01590 ATCIPK14 ATOFP1 AT5G01890 STN8 Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ABCI20 AtHsp70-2 AT-HSC70-1 AT5G02610 AT5G02760 LCL1 AT5G02870 AT5G02940 AT5G03140 LAC11 ADK2 AtNCS1 AT5G03620 SBE2.2 PTL 54CP GYRB2 FD-GOGAT AtMC9 ATPAL3 SIR AT5G04840 EMB2771 AtFAD8 ATEGY2 AT5G05790 UGT76C2 2-Cys AT5G06770 AT5G07020 AT5G07030 AT5G07090 ERL2 ATMSRA2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. SMC6A ATMYB29 ATRPA70B AtGDPD6 AT5G08050 scpl35 HEMC AGAL2 PDE340 AT5G08650 AT5G09240 AtPPa6 PMDH2 AT5G09800 CESA5 AT5G10020 ATMIPS3 AT5G10605 AT5G10620 AT5G10690 AT5G10770 AT5G10920 CIPK5 APT5 HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 TINY2 AT5G12110 ATTERC Encodes a protein with similarity to REN1, a Rho GTPase activating protein. DiT1 ATGSL12 ABAP1 ATCYP20-2 AT5G13140 EMB3136 SVR3 ATCHS CARAB-AK-LYS ATIMD1 AT5G14210 AT5G14650 ATDEF2 AO AT-P5C1 AT5G15050 AtENODL17 APG6 GAUT14 AtbZIP3 ATCOL1 AT5G16130 AtMYB43 DHAR3 EMB2247 AT5G17160 ENH1 PSY RVE1 AT5G17350 AT5G17660 AT5G17670 EMB1241 PSRP6 encodes an adenylyltransferase ATOBGC PCB2 BAM9 AGP25 EMB3013 ADG2 AT5G19240 AT5G19760 AtHBP5 ATMGD2 ATGER3 AT5G20700 ATCPN21 CRR42 AT5G21060 AT5G21100 AT5G21222 AT5G22340 anac090 AT5G22440 EMB1030 IMS3 IMS2 CaS HCF136 AT5G23480 ATSIG5 SQE5 AT5G24155 ATSS1 PGL5 LSU2 CRY3 ESE3 AT5G25590 tny AT5G26010 AT5G26330 SHM2 AT5G27240 AT5G27390 MK AT5G27560 AT5G28500 BIP1 ARRPS1 AT5G35170 AMOS1 ATGSL1 G6PD1 atylmg3 DEG10 ARF8 CIR1 AT5G37790 ASF1B AT5G38510 AT5G38520 APE1 CRR7 CDF2 OLI7 DEG8 AT5G40060 CRK42 UPM1 RPL27 DRB5 RPS10B AT5G41760 BIP AT5G42070 ATBG_PPAP scpl42 ARC6 ATS AT5G42720 CYCA3;1 NF-YC13 TZP NDH18 KCS20 SDG18 AT5G44520 AT5G44530 MCM6 AT5G44680 AT5G45280 ATFKBP13 AT5G45720 AT5G45775 CHL AT5G45950 AT5G45960 AT5G46220 MCM3 AT5G46390 BSK2 AT5G46580 bHLH071 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. LIL3:2 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT5G47620 NF-YB2 AMK2 AT5G47970 GFA2 ADG1 AT5G48360 HINT3 AT5G48740 AT5G48790 LPA66 HCT ATPRMT4A OVA2 AT5G49215 ATMYB111 MMT cpHsc70-2 AT5G50110 AtPIMT2 CP31B FSD2 AT5G51110 AT5G51310 ATTPPA AT5G51560 At-NEET ATPGMP AT5G52010 OVA6 B2 AT5G52780 AT5G52950 AT5G52970 AT5G53070 TRY ATPMEPCRF AtPLR1 AT5G53920 ATOMT1 PTAC15 THE1 AHL CRLK1 RPL24 AT5G55220 ATFTSZ1-1 GDPDL4 AT5G55520 CRR21 AtHsp90.2 AT5G56040 AT5G56840 AT5G56850 AT5G56890 LUT2 AT5G57610 CER3 APO2 NPL1 NdhN AT5G58330 AT5G58480 DDB2 AtcPT4 ftsh9 AT5G59130 AT5G59500 AT5G59600 AT5G59610 AT5G59740 AtRIBA3 AT5G59850 ATLAC17 AT5G60130 CLB4 AT5G60670 ATMYB34 ATRPA70D PDCB1 AT5G61170 AT5G61350 EMB2728 AtMYB28 AT5G61570 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ATCNX1 AGL42 ATGT18 ANAC101 CDF1 AHA11 DXR AT5G62840 ARR6 ATNDPK2 ATRMI1 GSA1 AT5G63700 ATERS DCT EMB3144 ASN2 ANNAT2 BAM1 XTH6 ATLFNR1 AT5G66470 AT5G66520 ATDDM1 AT5G66770 ABA1 ICU2 AT5G67200 RLK MATK
GO:0006098 pentose-phosphate shunt	BP	6.889e-70	POR LIP2 emb2394 LPA19 ABC1 CRB ATGSTU18 ATFD1 AT1G12800 PnsL2 AT1G14345 NDF1 AT1G16080 GLYR2 AT1G18060 NDF6 LHCA2*1 ATLFNR2 DRT112 AT1G22630 G6PD3 PRK AT1G32470 FdC2 GAPB FTSH1 GDC1 AT1G51110 ATSCO1 AT1G62780 ISPF NDF2 AT1G65230 CRR23 emb2184 LQY1 AT1G76450 AT1G77090 RPI2 ATSULA AtFBA1 AT2G21530 AT2G21960 YCF37 PRPL35 AT2G27680 PY ATFC-II AT2G33180 EDA3 GDCH AT2G36145 AT2G43560 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATGSTF11 EMB3119 PGK1 ESM1 MFP1 NDF4 DAC AT3G22210 HCF101 DEG1 PTAC16 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G56010 GUN4 AT3G59780 AT3G61870 CSP41A AtcpRRF EMB3126 ANTR2 AT4G02530 PETC APX4 ATPD CYP83A1 LIL3:1 PGR5-LIKE AtFBA7 AT4G27700 AT4G28740 PGR3 PDE334 AtGLDP1 ATHDA14 AT4G34090 SEP1 AtFBA2 ATPDX1 SBE2.2 2-Cys AT5G08050 HEMC AT5G08650 PMDH2 ENH1 PCB2 ADG2 CaS HCF136 PGL5 ARRPS1 ATGSL1 G6PD1 atylmg3 AT5G44520 Encodes the mitochondrial ATP synthase subunit delta. ADG1 CP31B AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 NdhN CLB4 DXR ATLFNR1
GO:0051156 glucose 6-phosphate metabolic process	BP	6.889e-70	POR LIP2 emb2394 LPA19 ABC1 CRB ATGSTU18 ATFD1 AT1G12800 PnsL2 AT1G14345 NDF1 AT1G16080 GLYR2 AT1G18060 NDF6 LHCA2*1 ATLFNR2 DRT112 AT1G22630 G6PD3 PRK AT1G32470 FdC2 GAPB FTSH1 GDC1 AT1G51110 ATSCO1 AT1G62780 ISPF NDF2 AT1G65230 CRR23 emb2184 LQY1 AT1G76450 AT1G77090 RPI2 ATSULA AtFBA1 AT2G21530 AT2G21960 YCF37 PRPL35 AT2G27680 PY ATFC-II AT2G33180 EDA3 GDCH AT2G36145 AT2G43560 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATGSTF11 EMB3119 PGK1 ESM1 MFP1 NDF4 DAC AT3G22210 HCF101 DEG1 PTAC16 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G56010 GUN4 AT3G59780 AT3G61870 CSP41A AtcpRRF EMB3126 ANTR2 AT4G02530 PETC APX4 ATPD CYP83A1 LIL3:1 PGR5-LIKE AtFBA7 AT4G27700 AT4G28740 PGR3 PDE334 AtGLDP1 ATHDA14 AT4G34090 SEP1 AtFBA2 ATPDX1 SBE2.2 2-Cys AT5G08050 HEMC AT5G08650 PMDH2 ENH1 PCB2 ADG2 CaS HCF136 PGL5 ARRPS1 ATGSL1 G6PD1 atylmg3 AT5G44520 Encodes the mitochondrial ATP synthase subunit delta. ADG1 CP31B AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 NdhN CLB4 DXR ATLFNR1
GO:0019684 photosynthesis, light reaction	BP	1.031e-69	LPA1 POR AT1G05140 emb2394 LPA19 CRB ATSRS GAPA-2 PnsL2 AT1G14270 AT1G14345 CP24 NDF1 HCF173 ACR11 NDF6 LHCA2*1 ATLFNR2 AT1G29700 AB165 PRK AT1G32470 ABCI7 RPL21C GAPB CP22 Lhca5 FTSH1 AT1G52220 PSAH-2 AT1G54500 AtTLP18.3 NDF5 AT1G56500 CCB4 ABC4 ATFD2 ATSCO1 AT1G63610 NDF2 PSBY STN7 PHYLLO CRR23 LPA3 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NDH-O emb2184 LQY1 PETE1 APG2 CRR3 LHCB2 PGR5 PSB29 AtFBA1 AT2G21530 SEP2 AT2G26500 PBCP AT2G30695 ARASP DAL EDA3 GDCH SKL2 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 PnsL1 RCA LHCB4.3 AT2G42220 AT2G43560 AT2G43945 PSAP RPH1 PnsL3 ATCYP38 ATBCA1 EMB3119 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 ADS3 NDF4 HCF107 DAC AtTic62 PSBTN GluTRBP PLSP1 GAPA CCB1 DEG1 PTAC16 AT3G47650 AT3G48420 OEC33 PSRP2 HCEF1 PPL1 SBPASE PrfB3 GUN4 CDS5 AT3G61870 CYP20-3 CSP41A TROL AT4G02530 PETC FIB ATPC1 APX4 ATPD PPD1 AT4G16980 LIL3:1 DEG5 PAM68 PSBQ AT4G22830 PGR5-LIKE ACP4 PSB28 FAD6 PDE334 AtHMAC6 SEP1 HCF244 SHM1 AtFBA2 SAMC1 STN8 OHP FD-GOGAT 2-Cys AT5G08050 HEMC AT5G08400 AtPPa6 PMDH2 EMB3136 ABAR ENH1 ADG2 ATOEP80 ATGER3 CRR42 CaS HCF136 ATSIG5 AT5G27560 ARRPS1 AMOS1 AT5G38520 APE1 CRR7 DEG8 ARC6 AtCEST CHL LIL3:2 AT5G48790 ATFRO7 CP31B AT5G51110 AT5G52780 LUT2 NPL1 NdhN AT5G58330 AT5G59250 CLB4 ATLFNR1 MATK
GO:0019362 pyridine nucleotide metabolic process	BP	1.047e-68	POR LIP2 emb2394 LPA19 ABC1 CRB ATGSTU18 ATFD1 AT1G12800 PnsL2 AT1G14345 NDF1 AT1G16080 GLYR2 AT1G18060 NDF6 LHCA2*1 ATLFNR2 DRT112 AT1G22630 G6PD3 PRK AT1G32470 FdC2 GAPB FTSH1 GDC1 AT1G51110 ATSCO1 AT1G62780 ISPF NDF2 AT1G65230 CRR23 emb2184 LQY1 AT1G76450 AT1G77090 RPI2 ATSULA AtFBA1 AT2G21530 AT2G21960 NAPRT2 YCF37 PRPL35 AT2G27680 PY ATFC-II AT2G33180 EDA3 GDCH AT2G36145 AT2G43560 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATGSTF11 EMB3119 PGK1 ESM1 MFP1 NDF4 DAC AT3G22210 HCF101 DEG1 PTAC16 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G56010 GUN4 AT3G59780 AT3G61870 CSP41A AtcpRRF EMB3126 ANTR2 AT4G02530 PETC APX4 ATPD CYP83A1 LIL3:1 PGR5-LIKE AtFBA7 AT4G27700 AT4G28740 PGR3 PDE334 AtGLDP1 ATHDA14 AT4G34090 SEP1 AtFBA2 ATPDX1 SBE2.2 2-Cys AT5G08050 HEMC AT5G08650 PMDH2 AO ENH1 PCB2 ADG2 CaS HCF136 PGL5 ARRPS1 ATGSL1 G6PD1 atylmg3 AT5G44520 Encodes the mitochondrial ATP synthase subunit delta. ADG1 CP31B AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 NdhN CLB4 DXR ATLFNR1
GO:0046496 nicotinamide nucleotide metabolic proces...	BP	1.047e-68	POR LIP2 emb2394 LPA19 ABC1 CRB ATGSTU18 ATFD1 AT1G12800 PnsL2 AT1G14345 NDF1 AT1G16080 GLYR2 AT1G18060 NDF6 LHCA2*1 ATLFNR2 DRT112 AT1G22630 G6PD3 PRK AT1G32470 FdC2 GAPB FTSH1 GDC1 AT1G51110 ATSCO1 AT1G62780 ISPF NDF2 AT1G65230 CRR23 emb2184 LQY1 AT1G76450 AT1G77090 RPI2 ATSULA AtFBA1 AT2G21530 AT2G21960 NAPRT2 YCF37 PRPL35 AT2G27680 PY ATFC-II AT2G33180 EDA3 GDCH AT2G36145 AT2G43560 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATGSTF11 EMB3119 PGK1 ESM1 MFP1 NDF4 DAC AT3G22210 HCF101 DEG1 PTAC16 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G56010 GUN4 AT3G59780 AT3G61870 CSP41A AtcpRRF EMB3126 ANTR2 AT4G02530 PETC APX4 ATPD CYP83A1 LIL3:1 PGR5-LIKE AtFBA7 AT4G27700 AT4G28740 PGR3 PDE334 AtGLDP1 ATHDA14 AT4G34090 SEP1 AtFBA2 ATPDX1 SBE2.2 2-Cys AT5G08050 HEMC AT5G08650 PMDH2 AO ENH1 PCB2 ADG2 CaS HCF136 PGL5 ARRPS1 ATGSL1 G6PD1 atylmg3 AT5G44520 Encodes the mitochondrial ATP synthase subunit delta. ADG1 CP31B AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 NdhN CLB4 DXR ATLFNR1
GO:0006739 NADP metabolic process	BP	1.251e-68	POR LIP2 emb2394 LPA19 ABC1 CRB ATGSTU18 ATFD1 AT1G12800 PnsL2 AT1G14345 NDF1 AT1G16080 GLYR2 AT1G18060 NDF6 LHCA2*1 ATLFNR2 DRT112 AT1G22630 G6PD3 PRK AT1G32470 FdC2 GAPB FTSH1 GDC1 AT1G51110 ATSCO1 AT1G62780 ISPF NDF2 AT1G65230 CRR23 emb2184 LQY1 AT1G76450 AT1G77090 RPI2 ATSULA AtFBA1 AT2G21530 AT2G21960 YCF37 PRPL35 AT2G27680 PY ATFC-II AT2G33180 EDA3 GDCH AT2G36145 AT2G43560 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATGSTF11 EMB3119 PGK1 ESM1 MFP1 NDF4 DAC AT3G22210 HCF101 DEG1 PTAC16 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G56010 GUN4 AT3G59780 AT3G61870 CSP41A AtcpRRF EMB3126 ANTR2 AT4G02530 PETC APX4 ATPD CYP83A1 LIL3:1 PGR5-LIKE AtFBA7 AT4G27700 AT4G28740 PGR3 PDE334 AtGLDP1 ATHDA14 AT4G34090 SEP1 AtFBA2 ATPDX1 SBE2.2 2-Cys AT5G08050 HEMC AT5G08650 PMDH2 ENH1 PCB2 ADG2 CaS HCF136 PGL5 ARRPS1 ATGSL1 G6PD1 atylmg3 AT5G44520 Encodes the mitochondrial ATP synthase subunit delta. ADG1 CP31B AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 NdhN CLB4 DXR ATLFNR1
GO:0072524 pyridine-containing compound metabolic p...	BP	2.771e-68	POR LIP2 emb2394 LPA19 ABC1 CRB ATGSTU18 ATFD1 AT1G12800 PnsL2 AT1G14345 NDF1 AT1G16080 GLYR2 AT1G18060 NDF6 LHCA2*1 ATLFNR2 DRT112 AT1G22630 G6PD3 PRK AT1G32470 FdC2 GAPB FTSH1 GDC1 AT1G51110 ATSCO1 AT1G62780 ISPF NDF2 AT1G65230 CRR23 emb2184 LQY1 AT1G76450 AT1G77090 RPI2 ATSULA AtFBA1 AT2G21530 AT2G21960 NAPRT2 YCF37 PRPL35 AT2G25830 AT2G27680 PY ATFC-II AT2G33180 EDA3 GDCH AT2G36145 PDX1L4 AT2G43560 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATGSTF11 EMB3119 PGK1 ESM1 MFP1 NDF4 DAC AT3G19030 AT3G22210 HCF101 DEG1 PTAC16 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G56010 GUN4 AT3G59780 AT3G61870 CSP41A AtcpRRF EMB3126 ANTR2 AT4G02530 PETC APX4 ATPD CYP83A1 LIL3:1 PGR5-LIKE AtFBA7 AT4G27700 AT4G28740 PGR3 PDE334 AtGLDP1 ATHDA14 AT4G34090 SEP1 AtFBA2 ATPDX1 SBE2.2 2-Cys AT5G08050 HEMC AT5G08650 PMDH2 AO ENH1 PCB2 ADG2 CaS HCF136 PGL5 ARRPS1 ATGSL1 G6PD1 atylmg3 AT5G44520 Encodes the mitochondrial ATP synthase subunit delta. ADG1 CP31B AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 NdhN CLB4 DXR ATLFNR1
GO:0008654 phospholipid biosynthetic process	BP	1.179e-67	AT1G01080 ATGPAT4 ATGPAT2 POR AT1G04420 LIP2 emb2394 EMB2784 ABC1 CRB AT1G12800 AT1G13650 LSMT-L AT1G14270 AT1G14345 FUG1 LHCA2*1 AOR Cpn60beta4 CYP97A3 ACT1 FdC2 PRPL11 GAPB AT1G44920 AT1G49380 GDC1 AtTLP18.3 AT1G56500 ABC4 AT1G62780 ISPF AT1G65230 CER6 PSRP3/1 AT1G74070 emb2184 AT1G77090 ATMEPCT PSB29 PDTPI ATSULA AtFBA1 AT2G21385 ATIPS2 CYP79B3 YCF37 AT2G24060 NPC2 ATCDPMEK AT2G27680 PY ATFC-II AT2G30695 PRPL28 EDA3 AT2G35410 SKL2 ATSIG6 AT2G37660 PGP1 NTRC AT2G42130 AT2G43560 FAB2 AT2G44920 PHR2 ATCYP38 EMB2768 ATF1 ATGSTF11 EMB3119 AT3G07670 PTAC13 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 AT3G15520 ADS3 MFP1 NDF4 EMB1865 GLTP3 HCF101 AAPT2 AT3G25660 AT3G25805 CCB1 RPL9 AT3G47650 ATG4 PSRP2 CP33 CYP97C1 AT3G54210 SBPASE AT3G56010 AT3G58140 AT3G59780 CDS5 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 TROL ATGPAT3 AT4G02530 EMB3129 ATPC1 CLS APX4 ATPD AT4G10300 CYP83A1 CYP97B3 AtCLA1 AT4G17560 LIL3:1 AT4G17740 CH-42 PTAC14 AT4G24750 ACP4 CHLM PSB28 emb2726 FAD6 PGR3 ATH1 AtGLDP1 ATHDA14 AT4G34090 SEP1 CLB6 MRL1 HCF244 MCA1 AtFBA2 AT4G39040 ATIPS1 SQD2 SBE2.2 54CP ATEGY2 HEMC AT5G08650 PMDH2 ATMIPS3 AT5G10690 PPD5 ATDEF2 PSY PCB2 ATCPN21 CaS ARRPS1 G6PD1 NDH18 ATFKBP13 CHL ADG1 CP31B ATPGMP AT5G52970 RPL24 AT5G55220 CLB4 DXR ATNDPK2 AT5G66470
GO:0006732 coenzyme metabolic process	BP	1.252e-67	POR LIP2 emb2394 LPA19 ABC1 CRB ATGSTU18 ATFD1 AT1G12800 PnsL2 AT1G14345 NDF1 AT1G16080 SPS2 GLYR2 AT1G18060 NDF6 AT1G19140 LHCA2*1 ATLFNR2 DRT112 AT1G20950 AT1G22630 AOR G6PD3 AAE14 PRK AT1G32470 FdC2 GAPB ATMCM2 FTSH1 GDC1 AT1G51110 AT1G54220 DHNS ABC4 ATSCO1 AT1G62780 ISPF NDF2 AT1G65230 CER6 PHYLLO CRR23 emb2184 AtGH9B7 LQY1 AT1G76450 AT1G77090 SPS1 RPI2 ATMEPCT FLA7 ATSULA AtFBA1 AT2G21530 AT2G21960 CYP79B3 NAPRT2 YCF37 PRPL35 AT2G24580 AT2G27680 PY ATFC-II ATCDT1A AT2G33180 EDA3 GDCH SKL2 AT2G36145 MAT3 PDX1L4 AT2G43560 FAB2 AT2G44920 KPHMT1 PSAP ATCYP38 ATBCA1 ATF1 ATGSTF11 EMB3119 AT3G07270 ATHST PGK1 ESM1 MFP1 NDF4 MAT4 DAC AT3G20260 AT3G22210 HCF101 DEG1 PTAC16 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 ELL1 HCEF1 PPL1 ATDFD SBPASE AT3G56010 GUN4 AT3G59780 AT3G61870 CYP20-3 CSP41A AtcpRRF APG1 EMB3126 ANTR2 TROL AT4G02530 PETC ATPC1 APX4 ATPD CYP83A1 AtCLA1 SPK1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. LIL3:1 PGR5-LIKE AtDIR6 3xHMG-box2 AT4G25870 AtFBA7 AT4G26860 AT4G27700 AT4G28740 FAD6 AtENODL15 PGR3 PDE334 ATH1 AtGLDP1 ATHDA14 AT4G34090 SEP1 AtFBA2 ATPDX1 SBE2.2 2-Cys AT5G08050 HEMC AT5G08650 PMDH2 AO AtENODL17 ENH1 PCB2 ADG2 CaS HCF136 PGL5 ARRPS1 ATGSL1 G6PD1 atylmg3 AT5G44520 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. ADG1 ATPTS MMT CP31B AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 AT5G53920 AT5G56040 NdhN AtcPT4 CLB4 DXR ANNAT2 ATLFNR1
GO:0090407 organophosphate biosynthetic process	BP	1.908e-67	AT1G01080 ATGPAT4 ATGPAT2 POR AT1G04420 LIP2 emb2394 AtSLP1 ATNDI1 EMB2784 ATPCNA1 AT1G07700 ABC1 CRB AT1G12800 AT1G13650 AT1G13730 LSMT-L AT1G14270 AT1G14345 UP6 FUG1 AT1G18060 LHCA2*1 AT1G22850 AT1G23410 AOR Cpn60beta4 AT1G28395 AT1G28530 AT1G29700 CYP97A3 AT-IE ACT1 FdC2 GBSS1 PRPL11 AT1G36280 GAPB ATMCM2 AT1G44920 RACK1B AT1G49380 GDC1 ATMUM4 AtTLP18.3 ZKT AT1G55960 AT1G56500 EMB3108 ABC4 ARP2 AT1G62780 ISPF NDF2 AMT1;2 AT1G64880 AT1G65230 AT1G66130 AT1G66330 pde194 CER6 PSRP3/1 FLN2 AOAT2 AT1G70985 ATPIN1 AT1G74070 emb2184 AT1G77090 AT1G79150 NIP6 ATMEPCT AT2G15020 PSB29 PDTPI ATSULA BBX18 AtFBA1 AT2G21385 ATRNR1 ATIPS2 CYP79B3 NAPRT2 YCF37 eIFiso4G2 AT2G24060 NPC2 ATCDPMEK AT2G27680 PY ATFC-II AT2G30695 BBX25 PRPL28 AT2G34460 NF-YA4 EDA3 AT2G35410 SKL2 ATSIG6 AT2G37240 AT2G37500 AT2G37660 PDX1L4 PGP1 SSL2 NTRC AT2G42130 AT2G43560 FAB2 AT2G44920 AtCCA1 PHR2 AT3G01060 AtSS2 ATCYP38 EMB2768 ATF1 VTC4 ATGSTF11 EMB3119 AT3G04840 RPL18 ATYLMG1-1 AT3G07670 PTAC13 AT3G10610 GYRA Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. AT3G12320 PGK1 AT3G12930 AT3G13120 ESM1 AT3G15460 AT3G15520 ADS3 MFP1 NDF4 RACK1C EMB1865 ATPURC GLTP3 AT3G23940 HCF101 ATL5 AAPT2 AT3G25660 AT3G25805 CCB1 ATTSO2 ATHD2A RPL9 AT3G47650 ATG4 PSRP2 CP33 CYP97C1 AT3G54210 SBPASE AT3G56010 AT3G56290 ADSS AT3G58140 AT3G59780 CDS5 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 AT4G00895 TROL ATGPAT3 AT4G02530 EMB3129 ATPC1 CLS APX4 ATNDK1 ATPD AT4G10300 NDPK3 AT4G12600 CYP83A1 CYP97B3 AtCLA1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 AT4G17560 LIL3:1 AT4G17740 AT4G18440 CH-42 AK-HSDH PTAC14 AT4G24750 AT4G24830 ACP4 CHLM SKS1 ATFIB2 AR192 AT4G26860 PSB28 emb2726 ATHMA2 AHA2 FAD6 AT4G31310 PGR3 PDE334 ATBT1 ATSDX1 ATH1 AtGLDP1 ATHDA14 AtHMAC6 AT4G34090 SEP1 CLB6 ASE2 MRL1 HCF244 MCA1 ATHMA1 SQE3 AtFBA2 AT4G39040 ATIPS1 SQD2 AT5G01260 ATPDX1 AT5G02870 SBE2.2 54CP ATEGY2 AT5G07090 HEMC PDE340 AT5G08650 PMDH2 ATMIPS3 AT5G10690 AT5G10920 PPD5 ATDEF2 AO AT5G15910 PSY AtUGP2 PCB2 ATCPN21 CaS ATSIG5 AT5G27390 ARRPS1 G6PD1 AT5G38520 OLI7 NDH18 AT5G44520 ATFKBP13 CHL Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. ADG1 AT5G50100 CP31B ATPGMP AT5G52970 AtPLR1 RPL24 AT5G55220 ATFTSZ1-1 CLB4 AHA11 DXR ATNDPK2 AT5G63700 AT5G64850 AT5G66470 ABA1
GO:0006790 sulfur compound metabolic process	BP	9.721e-66	AtBE2 POR LIP2 EMB2784 AT1G09310 ATGSTU17 ATGLX1 AT1G11860 ATSRS ATNRT1 AT1G12800 CP24 CYP79F2 BUS1 AtHBP1 ATSOT17 LHCA2*1 APS2 ATLFNR2 DRT112 AT1G20950 AOR PSAK IMPL1 AK-HSDH PRK AT1G32470 AT1G33110 GAPB ATCAO CP22 ATMCM2 bHLH115 AT1G51340 PSAH-2 AT1G54220 ABCD2 AtTLP18.3 AT1G55260 AGP21 AT1G55360 AT1G56190 ATATP-PRT1 AT1G60000 APR2 ACO2 FMO FMO ISPF AT1G65230 FMO AT1G66430 PSBY AT1G68260 CER6 AT1G70280 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AtGH9B7 PETE1 ACR3 AT1G77090 LCR68 ATMEPCT AIR3 FLA7 AT2G05920 AKN1 ATHNIR PDTPI AtFBA1 CYP79B3 ATMES3 BASS2 AT2G27680 PY ATFC-II RPT2 ATCDT1A AT2G31670 AT2G31790 AT2G35260 GDCH SKL2 MAT3 UMAMIT12 ATCAX1 PnsL1 AT2G42220 ATLEUD1 FAB2 ATHOL1 ATCB5-C AtCGS1 ATF1 VTC4 ATGSTF11 ATMS2 EMB3119 ATSFR2 ADK1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 ESM1 MFP1 NDF4 ECT6 MAT4 BCAT4 AT3G20260 ATSAHH2 ATGR1 PLSP1 ATPRX AT3G26450 DEG1 UMAMIT47 ATGSTU27 PTAC16 GSA2 AT3G50685 OEC33 ATG4 FTSZ2-2 ELL1 AT3G54400 ATGR2 ATGRXCP SBPASE AT3G56010 IPMI1 GUN4 MTHFR1 AT3G60750 ARATH;BSAS3;1 CYP20-3 APG1 TROL AOP APR ATPC1 ATMSRB5 APX4 ATPD BASS5 CYP83A1 AT4G13840 AtCLA1 SPK1 CH-42 ATRP1 APR3 AT4G23670 AtDIR6 3xHMG-box2 AT4G24930 AT4G25870 AtENODL2 AT4G30020 FAD6 AtENODL15 PDE334 ATH1 AtGLDP1 SQD1 ATHDA14 ATSERAT3;2 MCA1 AtGGPPS11 XTH7 ROC1 AtFBA2 ATIPS1 AKN2 AT4G39970 SQD2 SBE2.2 SIR 2-Cys ATMYB29 HEMC AtPPa6 PMDH2 ATCYP20-2 AT5G13140 ATIMD1 AtENODL17 PCB2 AGP25 ATCPN21 IMS3 IMS2 CaS ATGSL1 AT5G38520 DEG8 AT5G41760 CHL TET1 PYL1 ADG1 HINT3 MMT ATPGMP AtPLR1 AHL AT5G56040 APO2 NPL1 AT5G58330 CLB4 ATMYB34 PDCB1 AtMYB28 DXR GSA1 ASN2 ANNAT2 ATLFNR1"
GO:0006644 phospholipid metabolic process	BP	6.800e-65	AT1G01080 ATGPAT4 ATGPAT2 POR AT1G04420 LIP2 emb2394 EMB2784 ABC1 CRB AT1G10900 AT1G12800 AT1G13650 LSMT-L AT1G14270 AT1G14345 FUG1 LHCA2*1 ATPIP5K1 AOR Cpn60beta4 IMPL1 CYP97A3 ACT1 FdC2 PRPL11 GAPB AT1G44920 AT1G49380 GDC1 PLDALPHA2 AtTLP18.3 AT1G56500 ABC4 AT1G62780 ISPF AT1G65230 CER6 PSRP3/1 AT1G74070 emb2184 AT1G77090 ATMEPCT PSB29 PDTPI ATSULA AtFBA1 AT2G21385 ATIPS2 CYP79B3 YCF37 AT2G24060 NPC2 ATCDPMEK AT2G27680 PY ATFC-II AT2G30695 CVL1 PRPL28 EDA3 AT2G35410 SKL2 ATSIG6 AT2G37660 PGP1 NTRC AT2G42130 AT2G43560 FAB2 AT2G44920 PHR2 ATCYP38 EMB2768 ATF1 VTC4 ATGSTF11 NPC4 EMB3119 AT3G07670 PIP5K6 PTAC13 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 AT3G15520 ADS3 MFP1 NDF4 EMB1865 GLTP3 HCF101 AAPT2 AT3G25660 AT3G25805 CCB1 RPL9 AT3G47650 ATG4 PSRP2 CP33 CYP97C1 AT3G54210 SBPASE AT3G56010 AT3G58140 AT3G59780 CDS5 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 TROL ATGPAT3 AT4G02530 EMB3129 ATPC1 CLS APX4 ATPD AT4G10300 CYP83A1 CYP97B3 AtCLA1 AT4G17560 LIL3:1 AT4G17740 CH-42 PTAC14 AT4G24750 ACP4 CHLM FAD4 PSB28 emb2726 FAD6 PGR3 ATH1 AtGLDP1 ATHDA14 AT4G34090 SEP1 CLB6 MRL1 HCF244 MCA1 AtFBA2 AT4G39040 ATIPS1 SQD2 SBE2.2 54CP ATEGY2 HEMC AT5G08650 PMDH2 ATMIPS3 AT5G10690 PPD5 ATDEF2 PSY AT5G17670 PCB2 ATCPN21 CaS ARRPS1 G6PD1 NDH18 ATFKBP13 CHL ADG1 CP31B ATPGMP AT5G52970 AHL RPL24 AT5G55220 CLB4 DXR ATNDPK2 AT5G66470
GO:0044283 small molecule biosynthetic process	BP	9.990e-63	KCS1 POR KCS2 LIP2 AtSLP1 ATNDI1 EMB2784 AT1G07700 KCS3 ADT6 AT1G09310 CRB AT1G09390 iPGAM1 AT1G10740 ATFD1 ADT1 ATGLX1 AT1G11860 ATSRS ATNRT1 AT1G12800 LSMT-L ATGA3OX1 AT1G15710 CP24 UP6 SPS2 AT1G18060 ATSOT17 AT1G19140 JMT ATLFNR2 DRT112 AT1G20950 AT1G22850 AOR GATL8 ARAB-1 AT1G29700 PSAK AAE14 ATIMD3 AK-HSDH CYP97A3 AT-IE PRK ACT1 AT1G32470 ABCI7 FdC2 GBSS1 AT1G33110 GAPB ATCAO CP22 LACS2 AtCXE5 bHLH115 AT1G51110 PSAH-2 ABA2 AtTLP18.3 AT1G55260 AGP21 AT1G55360 ZKT AT1G55960 AT1G56190 ATNAS4 ATATP-PRT1 AT1G60000 DHNS ABC4 ACO2 FMO ISPF BDG1 NDF2 AMT1;2 G-TMT AT1G66130 AT1G66180 ATGSR2 AT1G66330 AT1G66430 PSBY AT1G68240 AT1G68260 CER6 PHYLLO AT1G70280 AOAT2 AT1G70985 AT1G72430 LPA3 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AtGH9B7 PETE1 ACR3 LACS9 AT1G77670 ATGSTU20 SPS1 NIP6 LCR68 ATMEPCT FLA7 AT2G05920 AT2G15020 ATHNIR KCS9 AT2G17630 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PDTPI BBX18 AtFBA1 AT2G21860 ATIPS2 CYP79B3 ATMES3 AT2G24060 HHP3 ATWRKY60 AT2G25830 FDH AT2G27360 AT2G27680 ADT3 PY ANTR1 AtFAD3 RPT2 AT2G30695 BBX25 AT2G31670 ATCB5-B AT2G33180 AT2G34460 CYP710A2 NF-YA4 GDCH SKL2 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37240 ADK AT2G37500 AT2G37660 PnsL1 RCA SSL2 AT2G42220 NPG1 ATLEUD1 FAB2 AT2G44040 CHL-CPN10 AT2G44920 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 KPHMT1 ATCB5-C AtCCA1 AT3G01060 AtCGS1 AtSS2 ATCYP38 ATBCA1 AK3 VTC4 RGL2 ATMS2 EMB3119 AT3G07270 ATERDJ3A ADK1 OMR1 AtFAD7 ATBSMT1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST AT3G12320 PGK1 AT3G12930 AT3G14390 HEME1 ADS3 ECT6 AT3G19030 AT3G19480 BCAT4 ATSAHH2 AT3G23940 ATPRX AT3G26450 ATCM1 AAO2 AT3G48460 GSA2 AT3G51140 ATG4 FTSZ2-2 ELL1 CYP97C1 AT3G54400 ATTSC13 ATDFD SBPASE AT3G56290 AT3G57010 NAGK IPMI1 GUN4 AT3G59890 AT3G60750 ARATH;BSAS3;1 CYP20-3 AtcpRRF APG1 EMB3126 TROL AT4G02530 PETC APR ATPC1 ATMSRB5 ATPD CYP83A1 CYP74B2 AtCLA1 SPK1 CH-42 AK-HSDH PyrD sks4 AT4G23670 AtDIR6 TAR2 ATRBP31 AT4G24830 ACP4 B1 AT4G25870 VTC2 AT4G26860 FAD4 FAD6 AT4G31310 PDE334 ATSDX1 ATH1 AtGLDP1 AGD2 EDA9 SQS2 ATSERAT3;2 MCA1 ROT3 MAP1D LBD39 SQE3 SHM1 ROC1 AtFBA2 AT4G39040 ATIPS1 AKN2 SQD2 AT5G01260 ATPDX1 AtHsp70-2 FD-GOGAT SIR ATNAS1 AtFAD8 2-Cys ERL2 HEMC AtPPa6 PMDH2 ATMIPS3 AT5G10920 DiT1 ATCYP20-2 AT5G13140 ATCHS CARAB-AK-LYS ATIMD1 AT-P5C1 AtENODL17 AT5G15910 PSY AtUGP2 PCB2 AGP25 AT5G19240 ATCPN21 AT5G21060 AT5G21100 AT5G22340 IMS3 IMS2 CaS ATSIG5 SQE5 AT5G24155 ATGSL1 AT5G38520 AT5G41760 KCS20 AT5G45280 ATFKBP13 AT5G46580 TET1 PYL1 ATPTS AT5G50100 CP31B AT5G51110 AT5G51310 B2 AtPLR1 AT5G53920 ATOMT1 ANK AT5G56040 APO2 AtcPT4 AtRIBA3 CLB4 ATMYB34 PDCB1 DXR Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. GSA1 AT5G63700 ATGCH AT5G64850 ASN2 ANNAT2 ATLFNR1 ABA1 EPS1
GO:0006090 pyruvate metabolic process	BP	3.176e-62	AT1G01080 POR AT1G04420 LIP2 emb2394 EMB2784 ABC1 CRB ATGLX1 AT1G12800 GAPA-2 AT1G13650 LSMT-L AT1G14270 AT1G14345 FUG1 LHCA2*1 AT1G20950 AOR Cpn60beta4 CYP97A3 ACT1 FdC2 PRPL11 GAPB AT1G44920 AT1G49380 GDC1 mMDH1 AT1G54220 AtTLP18.3 AT1G56190 AT1G56500 ABC4 ACO2 AT1G62780 ISPF AT1G65230 ATGSR2 CER6 PSRP3/1 AP40 ENO1 AT1G74070 emb2184 AT1G77090 ATMEPCT PSB29 PDTPI ATSULA AtFBA1 AT2G21385 CYP79B3 YCF37 AT2G24060 ATCDPMEK AT2G27680 PY ATFC-II AT2G30695 PRPL28 EDA3 AT2G35410 SKL2 ATSIG6 AT2G37660 NTRC AT2G42130 AT2G43560 FAB2 AT2G44920 PHR2 ATCYP38 ATF1 ATGSTF11 EMB3119 AT3G07670 PTAC13 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 AT3G15520 ADS3 MFP1 NDF4 EMB1865 HCF101 AT3G25805 GAPA CCB1 RPL9 AT3G47650 ATG4 PSRP2 CP33 CYP97C1 AT3G54210 SBPASE AT3G56010 AT3G58140 AT3G59780 AT3G60750 ATPIP1 ARATH;BSAS3;1 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 TROL AT4G02530 EMB3129 ATPC1 APX4 ATPD AT4G10300 CYP83A1 ATSAHH1 CYP97B3 AtCLA1 AT4G17560 LIL3:1 CH-42 AT4G24750 ACP4 CHLM AtFBA7 PSB28 emb2726 FAD6 PGR3 ATH1 AtGLDP1 ATHDA14 AT4G34090 SEP1 CLB6 MRL1 HCF244 AtFBA2 AT4G39040 SQD2 AT-HSC70-1 SBE2.2 54CP SIR ATEGY2 HEMC AT5G08650 PMDH2 AT5G10690 PPD5 ATDEF2 PSY PCB2 AT5G19760 ATCPN21 CaS ARRPS1 ATGSL1 G6PD1 OLI7 NDH18 ATFKBP13 CHL Encodes the mitochondrial ATP synthase subunit delta. ADG1 CP31B ATPGMP AT5G52970 RPL24 AT5G55220 CLB4 DXR ATNDPK2 AT5G66470
GO:0008299 isoprenoid biosynthetic process	BP	4.768e-61	AT1G01080 AtD27 POR AT1G04420 LIP2 emb2394 CCR2 EMB2784 ABC1 CRB Z-ISO ATFD1 AT1G11860 AT1G12800 AT1G13650 LSMT-L AT1G14270 AT1G14345 ATGA3OX1 NDF1 AT1G16080 FUG1 LHCA2*1 AOR Cpn60beta4 CYP97A3 ACT1 FdC2 PRPL11 GAPB AT1G44920 AT1G49380 GDC1 ABA2 AtTLP18.3 ZKT CPN60B AT1G56500 AT1G57770 ABC4 AT1G62780 ISPF BDG1 AT1G65230 AT1G68240 CER6 PSRP3/1 AT1G73110 AT1G74070 emb2184 AT1G77090 AT1G80030 ATMEPCT PSB29 PDTPI ATSULA AtFBA1 AT2G21385 CYP79B3 YCF37 AT2G24060 CYP711A1 ATCDPMEK AT2G27680 PY ATFC-II AT2G30695 AT2G32640 ATCB5-B PRPL28 CYP710A2 EDA3 AT2G35410 SKL2 ATSIG6 AT2G37660 NTRC AT2G42130 AT2G43560 FAB2 AT2G44920 PHR2 ATCYP38 ATF1 ATGSTF11 RGL2 EMB3119 AT3G07670 ATERDJ3A PTAC13 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST PGK1 AT3G12930 AT3G13120 ESM1 AT3G15520 ADS3 MFP1 NDF4 EMB1865 HCF101 AT3G25805 ATPRX ORF02 CCB1 AAO2 RPL9 PTAC16 AT3G47650 AT3G48420 AT3G50685 ATG4 PSRP2 CP33 ELL1 CYP97C1 HCEF1 AT3G54210 SBPASE AT3G56010 AT3G58140 GUN4 AT3G59780 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 APG3 AtcpRRF APG1 EMB3126 TROL AT4G02530 EMB3129 ATPC1 APX4 ATPD AT4G10300 CYP83A1 PDE226 CYP97B3 AtCLA1 AT4G17560 LIL3:1 CH-42 AT4G24750 ACP4 CHLM B1 PSB28 emb2726 FAD6 PGR3 ATH1 AtGLDP1 ATHDA14 AT4G34090 SEP1 CLB6 MRL1 HCF244 AtGGPPS11 MAP1D SQE3 AtFBA2 AT4G39040 SQD2 SBE2.2 54CP FD-GOGAT ATEGY2 AT5G07020 ERL2 HEMC AT5G08650 PMDH2 AT5G10690 PPD5 ATDEF2 PSY PCB2 AtHBP5 ATCPN21 CaS HCF136 SQE5 MK ARRPS1 G6PD1 NDH18 ATFKBP13 CHL AMK2 ADG1 OVA2 CP31B AT5G51310 ATPGMP B2 AT5G52970 RPL24 AT5G55220 LUT2 NdhN AtcPT4 CLB4 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. DXR ATNDPK2 AT5G66470 ABA1"
GO:0044249 cellular biosynthetic process	BP	1.411e-59	LHY AT1G01080 KCS1 ASG4 ATGPAT4 CER1 ATGPAT2 ATCSLD5 ATWEE1 AtD27 AtBE2 POR ATBARD1 KCS2 AXR3 AT1G04420 AT1G04480 PDLP2 BDL LIP2 CTF18 emb2394 BT3 AT1G05870 CCR2 EMB2784 ATPCNA1 KCS3 ATLIG1 ADT6 AT1G08280 ABC1 emb2411 AT1G09310 CRB AT1G09390 AT1G09440 similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase AT1G09590 AT1G09690 AT1G10585 AT1G10740 Z-ISO ATRECQ4A ATFD1 AT1G11670 ATSS3 ADT1 ATGLX1 AT1G11860 ATSRS ATNRT1 SUMM2 HPR3 AT1G12800 AT1G13650 AT1G13730 LSMT-L AT1G14270 AT1G14345 AtMYB124 ATWHY1 AT1G14460 AT1G14600 ATGA3OX1 CYCA2;3 AT1G15710 CP24 AT1G15930 NDF1 AT1G16080 CYP79F2 BUS1 HCF173 SPS2 AtHBP1 FUG1 AT1G18440 AT1G18540 ATSOT17 NDF6 AT1G19140 LHCA2*1 BES1 AT1G19490 JMT ATCLH1 AT1G19680 ATLFNR2 DRT112 AT1G20950 AGL87 AT1G22630 AT1G23410 AOR Cpn60beta4 AT1G26790 AT1G26880 AtHB23 ATHB54 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. AT1G27120 SPL11 AT1G28395 AT1G28530 SRD2 ARAB-1 PSAK AAE14 ATIMD3 IMPL1 AK-HSDH CYP97A3 AT-IE PRK ATPRR1 ACT1 AT1G32470 ABCI7 FdC2 GBSS1 PRPL11 AT1G33110 AtGXMT1 At-FANCM AT1G35560 RPL21C AT1G36280 ATNR2 AT1G41880 GAPB Aty2 ATCAO CP22 ATMCM2 AT1G44920 EMB3105 GATB RACK1B AT1G49380 LACS2 AT1G49580 POLGAMMA2 GDC1 bHLH115 AT1G51110 AT1G51340 4CL.1 PSAH-2 ABA2 ATMUM4 AT1G54220 ABCD2 AT1G54500 AtTLP18.3 AT1G54790 AT1G55210 AT1G55260 AGP21 AT1G55360 NDF5 ZKT CPN60B AT1G55690 HAC04 AT1G56050 AT1G56190 ATNAS4 AT1G56500 AtMYB50 AT1G57660 AT1G57770 ATATP-PRT1 AT1G58170 AtHEMA1 ATXYN1 ZCF125 EMB3108 AT1G60000 DHNS ABC4 AT1G61190 AT1G61300 ARP2 ACO2 FMO FMO AT1G62630 ATSCO1 AT1G62780 AT1G63470 ISPF REB1 AT1G64500 AT1G64510 BDG1 RPOD1 AT1G64880 G-TMT AT1G65070 AT1G65230 FMO AT1G65870 ATGSR2 AtMYB20 AT1G66430 pde194 PSBY CSK AT1G68240 AT1G68260 BBX14 CER6 PSRP3/1 AT1G68600 PHO1;H1 PHYLLO FLN2 AT1G70000 AT1G70280 AT1G70550 AOAT2 AT1G70600 PGM2 ANAC030 AP40 LPA3 AT1G73110 AT1G73390 ATPIN1 AT1G73600 BBX16 AT1G74070 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. RPS9 AT1G75150 emb2184 PETE1 AT1G76450 ACR3 AT1G77090 LACS9 AT1G77670 AT1G77750 GNR1 AT1G77940 ATGSTU20 SPS1 AT1G78995 AT1G79150 AT1G79630 CS17 AT1G80030 APG2 AT2G01210 LCR68 ATMEPCT AIR3 AT2G04790 EMB2761 AT2G05920 MCM5 AKN1 ATHNIR KCS9 BLH7 AT2G17630 rps15ab AT2G20450 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 AT2G21385 AT2G21530 ATRL2 ATRNR1 ATIPS2 CYP79B3 IAA8 NAPRT2 ATMES3 YCF37 AT2G23690 eIFiso4G2 AT2G24060 PRPL35 PDE319 AT2G24170 ATWRKY60 ESE2 AT2G25830 OVA4 CYP711A1 FDH NPC2 BASS2 ATCDPMEK AGO4 AT2G27360 AT2G27680 AT2G27710 ADT3 ARF10 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 AT2G29180 PY ANTR1 AtFAD3 MAPKKK14 ATFC-II TCL2 RPT2 AT2G30695 TCP10 FIONA ATERF15 ATCDT1A BBX25 AT2G31670 AT2G31790 MRL7-L AT2G32060 ATOFP16 BAM6 ATCSLB03 ATCSLB04 AT2G32640 ATCB5-B AT2G33180 DAL PRPL28 BUBR1 CYP710A2 HMR ATHB-14 NF-YA4 EDA3 AT2G35260 GDCH AT2G35410 SKL2 ATERF38 AT2G35840 NHL12 AT2G36145 RPL24A AT2G36630 MAT3 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ADK ATRPS5B UMAMIT12 AT2G37500 AT2G37600 AS1 AT2G37660 AtHBP2 ATCAX1 PDX1L4 TBL34 GAUT7 AT2G39240 SNZ PGP1 ATRPL23A PnsL1 RCA AT2G40200 AT2G40400 HEME2 ETG1 ARR16 GLY1 SSL2 ARR8 AT2G41330 NTRC AT2G42130 AT2G42220 ATPPC2 ATLEUD1 AT2G43560 FAB2 AT2G44040 AT2G44230 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 KPHMT1 ATCB5-C AtCCA1 PHR2 RPH1 AtCGS1 AtSS2 PnsL3 ATCYP38 ATBCA1 LSF1 AT3G01660 AK3 EMB2768 ATF1 AT3G02820 PNT1 VTC4 ATGSTF11 AtUGP1 RGL2 ATMS2 EMB3119 AT3G04840 AT3G05560 RPL18 ATSFR2 AT3G06680 TRX AT3G07110 AT3G07270 ATYLMG1-1 AT3G07670 PIP5K6 AT3G08740 ATERDJ3A AT3G09050 AT3G09200 PTAC13 LCL5 ADK1 OMR1 GYRB1 AT3G10310 PAL4 AT3G10610 GYRA AT3G10760 LSF2 AtFAD7 ATBSMT1 AT3G11510 CYC2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST PGK1 AT3G12930 AT3G13000 AT3G13120 AT3G13180 ATKRS-2 AT3G13510 ESM1 AT3G14390 GOX2 HEME1 mMDH2 PRPS20 AT3G15460 AT3G15520 ADS3 MFP1 AT3G16080 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. EMB2083 HCF107 RFC3 ECT6 MAT4 HYH DAC WOX1 EMB1270 RACK1C EMB1865 ATUNG AT3G19030 AT3G19100 ATCAD4 AT3G19480 BCAT4 AT3G20010 AT3G20150 AT3G20260 ATPURC AtBBX32 GluTRBP 4CL2 GLTP3 ABCI12 BBX31 AT3G22210 ATTSO1 ELIP AT3G23090 bHLH34 AT3G23390 ATSAHH2 ATTOPII AT3G23930 AT3G23940 HCF101 PLSP1 ATL5 AAPT2 AT3G25660 AT3G25805 CRF11 RPL15 ATPRX AT3G26450 ORF02 CCB1 ATTSO2 GHS1 AT3G27200 AT3G27540 AT3G27640 RPL12 RPL12-C DEG1 UMAMIT47 AT3G28760 ATCM1 CHR38 AAO2 anac061 AT3G44590 AT3G44740 ATHD2A RPL9 AT3G45030 ATMYB48 PTAC16 DUT1 AT3G47650 EDD AT3G48200 AT3G48420 AT3G48440 AT3G48460 GSA2 ATBBC1 DMS3 CRK ICK2 AT3G50685 OEC33 AT3G51140 AT3G51280 ATG4 AT3G51950 PSRP2 ATSPP2 CP33 FTSZ2-2 AT3G52900 ELL1 CYP97C1 ATPAL2 AT3G53680 PYRR HCEF1 AT3G54210 AT3G54390 AT3G54400 AT3G54750 ATGRXCP PDE329 ATTSC13 OVA1 ATDFD SBPASE AT3G56010 UGP3 AT3G56230 AT3G56290 AT3G56300 AT3G56680 PSRP5 BHLH038 BHLH039 AT3G57010 AT3G57020 AT3G57030 ARR9 PrfB3 AT3G57400 NAGK ADSS GIS AT3G58140 IPMI1 GUN4 ATRAD21.2 AT3G59780 AT3G59890 AT3G60245 CDS5 ATHAM2 AT3G60750 ARATH;BSAS3;1 AT3G61870 AT3G61950 CYP20-3 UBQ5 APG3 ATIPT3 CSP41A AtcpRRF APG1 EMB3126 BRCA2(IV) UNE10 ATHAM3 AT4G00165 BAM2 AT4G00810 AT4G00895 MEE47 TROL GT72B1 HEMG1 ATGPAT3 MCM7 AT4G02530 EMB3129 AOP AT4G03090 PETC EMB2369 APR ATPC1 ATMSRB5 CLS APX4 ATNDK1 ATPD ATSPS4F AT4G10300 AT4G10450 AT4G10600 NDPK3 AT4G11120 AT4G11175 BASS5 AT4G12600 AT4G13170 CYP83A1 AT4G13840 ATSAHH1 AT4G14200 PDE226 AT4G14360 NF-YB3 AT4G15000 CYP97B3 AT4G15430 CYP74B2 AtCLA1 AT4G16141 SVR7 AtBAM3 ATNS1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 AT4G17560 LIL3:1 AT4G17740 MYC4 AT4G18440 CH-42 RPL16B AG CYCT1;2 AK-HSDH AT4G19985 PTAC14 ATRAB8D AT4G20760 GHR1 PyrD ATRP1 APT3 PGR5-LIKE CCS52A1 AESP AT4G23670 AtDIR6 ATCSLG3 TAR2 AT4G24750 ATRBP31 AT4G24790 AT4G24830 AT4G24930 ACP4 CHLM SKS1 ATFIB2 B1 AtFBA7 AT4G26660 AR192 VTC2 AT4G26860 FAD4 AtENODL2 AT4G27700 MRL7 PSB28 emb2726 AT4G30020 ATHMA2 AHA2 AT4G30470 AT4G30800 FAD6 LRL2 PGR3 PDE334 ATBT1 Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development. ATSDX1 AT4G32915 ATH1 AtGLDP1 SQD1 AT4G33400 ATHDA14 AT4G33500 AtHMAC6 AGD2 AT4G33760 AT4G34090 SEP1 EDA9 CLB6 AT4G34555 BLH6 SQS2 AT4G34730 ASE2 MRL1 HCF244 AT4G35270 XCP1 ATSERAT3;2 MCA1 GATA7 ATRL3 AT4G36640 AtGGPPS11 MAP1D ATHMA1 SQE3 XTH7 SHM1 pde191 ATMYB4 ROC1 BBX19 AtFBA2 AT4G39040 APL3 ATCAD9 SAMC1 AT4G39630 ATIPS1 AKN2 AT4G39970 LAC10 SQD2 TBL3 ATPDX1 ATOFP1 AtHsp70-2 AT5G02610 LCL1 AT5G02870 AT5G02940 LAC11 ADK2 AtNCS1 SBE2.2 PTL 54CP GYRB2 FD-GOGAT SIR AT5G04840 ATNAS1 EMB2771 AtFAD8 ATEGY2 AT5G05790 2-Cys AT5G06770 AT5G07020 AT5G07090 ERL2 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. SMC6A ATMYB29 ATRPA70B AT5G08050 HEMC AGAL2 PDE340 AT5G08650 AT5G09240 AtPPa6 PMDH2 CESA5 ATMIPS3 AT5G10690 AT5G10920 APT5 HY5 OCP3 PPD5 AtMYB3R4 TINY2 AT5G12110 ATTERC Encodes a protein with similarity to REN1, a Rho GTPase activating protein. DiT1 ATGSL12 ABAP1 ATCYP20-2 AT5G13140 EMB3136 ABAR ATCHS CARAB-AK-LYS ATIMD1 ATDEF2 AO AT-P5C1 GAUT14 AtbZIP3 AT5G16130 AtMYB43 EMB2247 PSY RVE1 AT5G17350 PSRP6 PCB2 BAM9 AGP25 ADG2 AT5G19240 AtHBP5 ATMGD2 ATCPN21 AT5G21060 AT5G21100 AT5G22340 anac090 AT5G22440 EMB1030 IMS3 IMS2 CaS HCF136 AT5G23480 ATSIG5 SQE5 ATSS1 LSU2 AT5G24760 ESE3 AT5G25590 tny AT5G26010 AT5G26330 AT5G27390 MK AT5G27560 AT5G28500 ARRPS1 AT5G35170 AMOS1 ATGSL1 G6PD1 atylmg3 ARF8 CIR1 ASF1B AT5G38520 APE1 CRR7 CDF2 OLI7 DEG8 UPM1 RPL27 RPS10B AT5G41760 AT5G42070 ATS NF-YC13 TZP NDH18 KCS20 SDG18 MCM6 ATFKBP13 AT5G45720 AT5G45775 CHL MCM3 BSK2 AT5G46580 bHLH071 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. NF-YB2 AMK2 ADG1 AT5G48740 ATPTS HCT OVA2 ATMYB111 CP31B FSD2 AT5G51110 AT5G51310 ATTPPA ATPGMP AT5G52010 OVA6 B2 AT5G52950 AT5G52970 AT5G53070 TRY AtPLR1 AT5G53920 ATOMT1 PTAC15 RPL24 ANK AT5G55220 ATFTSZ1-1 CRR21 AT5G56840 LUT2 CER3 APO2 NPL1 NdhN AT5G58330 AtcPT4 AT5G59740 AtRIBA3 AT5G59850 ATLAC17 AT5G60130 CLB4 AT5G60670 ATMYB34 ATRPA70D PDCB1 AT5G61170 AtMYB28 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AGL42 ATGT18 ANAC101 CDF1 AHA11 DXR ARR6 ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. GSA1 AT5G63700 ATERS ATGCH ASN2 ATLFNR1 AT5G66470 ATDDM1 AT5G66770 ABA1 ICU2 EPS1 AT5G67200 MATK
GO:0009658 chloroplast organization	BP	1.440e-59	POR AT1G04770 ABC1 CRB AT1G11860 ATSRS AT1G12800 LSMT-L ATECB2 FUG1 PRK AtLrgB ABCI7 RPL21C GAPB AT1G44000 GDC1 AT1G56500 ATSCO1 AT1G62780 AT1G64500 AT1G65230 PMI2 FLN2 JAC1 emb2184 AT1G76450 EMB1047 APG2 AtHsp90.5 PSB29 PDTPI ATSULA AtFBA1 OVA4 AT2G27680 CH-CPN60A MAPKKK14 AT2G30695 FIONA ATCDT1A MRL7-L ARASP DAL EDA3 AT2G35410 ATSIG6 AT2G39670 MIZ1 SPA1 ATCYP38 ATCOL2 EMB2768 TRX ATYLMG1-1 AT3G07670 PTAC13 PGK1 AT3G13120 AT3G13180 Cpn60beta2 ATKRS-2 MFP1 HCF107 DAC EMB1865 ATPREP1 QWRF1 FIB4 HCF101 PLSP1 EMB3123 MAR1 PTAC16 AT3G47070 EDD AT3G48200 OEC33 AT3G51140 ATG4 FTSZ2-2 HCEF1 ATGR2 AT3G56290 PrfB3 AT3G58140 APG3 AtcpRRF EMB3126 TROL EMB3129 EMB2369 SVR7 LIL3:1 PTAC14 PGR5-LIKE ARC1 cpHsc70-1 AT4G24750 EMB1923 MRL7 AT4G28740 emb2726 PGR3 AT4G33760 ASE2 MRL1 SAMC1 FD-GOGAT AT5G07020 AT5G08050 AT5G08650 PMDH2 KAC1 AT5G11480 ATTERC EMB3136 AT5G13770 APG6 EMB2247 ATOBGC ADG2 ATOEP80 ATCPN21 emb1211 HCF136 EFO2 ARC11 ATSIG5 LSU2 ARRPS1 AMOS1 ARC6 AtCEST FSD2 AT5G51110 OVA6 PDV1 AT5G55220 ATFTSZ1-1 NPL1 CDF1 ATERS EMB3144
GO:0044272 sulfur compound biosynthetic process	BP	5.929e-59	AtBE2 POR LIP2 EMB2784 AT1G09310 ATGLX1 AT1G11860 ATNRT1 AT1G12800 CP24 CYP79F2 BUS1 AtHBP1 ATSOT17 LHCA2*1 ATLFNR2 DRT112 AOR PSAK AK-HSDH PRK AT1G32470 AT1G33110 GAPB ATCAO CP22 bHLH115 AT1G51340 PSAH-2 AT1G54220 ABCD2 AtTLP18.3 AT1G55260 AGP21 AT1G55360 AT1G56190 ATATP-PRT1 AT1G60000 ACO2 FMO FMO ISPF AT1G65230 FMO AT1G66430 PSBY AT1G68260 CER6 AT1G70280 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PETE1 ACR3 LCR68 ATMEPCT AIR3 AT2G05920 AKN1 ATHNIR PDTPI AtFBA1 CYP79B3 ATMES3 BASS2 AT2G27680 PY RPT2 AT2G31670 AT2G31790 AT2G35260 GDCH SKL2 MAT3 UMAMIT12 ATCAX1 PnsL1 AT2G42220 ATLEUD1 FAB2 ATCB5-C AtCGS1 VTC4 ATGSTF11 ATMS2 EMB3119 ATSFR2 ADK1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 ESM1 NDF4 ECT6 MAT4 BCAT4 ATSAHH2 PLSP1 ATPRX AT3G26450 DEG1 UMAMIT47 PTAC16 GSA2 AT3G50685 OEC33 ATG4 FTSZ2-2 AT3G54400 ATGRXCP SBPASE IPMI1 GUN4 AT3G60750 ARATH;BSAS3;1 CYP20-3 APG1 TROL AOP APR ATPC1 ATMSRB5 BASS5 CYP83A1 AT4G13840 AtCLA1 CH-42 ATRP1 AT4G23670 AT4G24930 AtENODL2 AT4G30020 FAD6 PDE334 ATH1 AtGLDP1 SQD1 ATSERAT3;2 MCA1 AtGGPPS11 XTH7 ROC1 AtFBA2 ATIPS1 AKN2 AT4G39970 SQD2 SIR 2-Cys ATMYB29 HEMC AtPPa6 PMDH2 ATCYP20-2 AT5G13140 ATIMD1 PCB2 AGP25 ATCPN21 IMS3 IMS2 CaS ATGSL1 AT5G38520 DEG8 AT5G41760 CHL TET1 PYL1 ADG1 ATPGMP AtPLR1 APO2 NPL1 AT5G58330 CLB4 ATMYB34 AtMYB28 DXR GSA1 ASN2 ATLFNR1
GO:0006720 isoprenoid metabolic process	BP	2.374e-58	AT1G01080 AtD27 POR AT1G04420 LIP2 emb2394 CCR2 EMB2784 ABC1 CRB Z-ISO ATFD1 AT1G11860 AT1G12800 AT1G13650 LSMT-L AT1G14270 AT1G14345 ATGA3OX1 NDF1 AT1G16080 FUG1 LHCA2*1 AOR Cpn60beta4 CYP97A3 ACT1 FdC2 PRPL11 GAPB AT1G44920 AT1G49380 GDC1 ABA2 AtTLP18.3 ZKT CPN60B AT1G56500 AT1G57770 ABC4 AT1G62780 ISPF BDG1 AT1G65230 AT1G68240 CER6 PSRP3/1 AT1G73110 AT1G74070 emb2184 AT1G77090 AT1G80030 ATMEPCT PSB29 PDTPI ATSULA AtFBA1 AT2G21385 CYP79B3 YCF37 AT2G24060 CYP711A1 ATCDPMEK AT2G27680 PY ATFC-II AT2G30695 AT2G32640 ATCB5-B PRPL28 CYP710A2 EDA3 AT2G35410 SKL2 ATSIG6 AT2G37660 NTRC AT2G42130 AT2G43560 FAB2 AT2G44920 PHR2 ATCYP38 ATF1 ATGSTF11 RGL2 EMB3119 AT3G07670 ATERDJ3A PTAC13 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST PGK1 AT3G12930 AT3G13120 ESM1 AT3G15520 ADS3 MFP1 NDF4 EMB1865 HCF101 AT3G25805 ATPRX ORF02 CCB1 AAO2 RPL9 PTAC16 AT3G47650 AT3G48420 AT3G50685 ATG4 PSRP2 CP33 ELL1 CYP97C1 HCEF1 AT3G54210 SBPASE AT3G56010 AT3G58140 GUN4 AT3G59780 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 APG3 AtcpRRF APG1 EMB3126 TROL AT4G02530 EMB3129 ATPC1 APX4 ATPD AT4G10300 CYP83A1 PDE226 CYP97B3 AtCLA1 AT4G17560 LIL3:1 CH-42 AT4G24750 ACP4 CHLM B1 PSB28 emb2726 FAD6 PGR3 ATSDX1 ATH1 AtGLDP1 ATHDA14 AT4G34090 SEP1 CLB6 MRL1 HCF244 AtGGPPS11 MAP1D SQE3 AtFBA2 AT4G39040 SQD2 SBE2.2 54CP FD-GOGAT ATEGY2 AT5G07020 ERL2 HEMC AT5G08650 PMDH2 AT5G10690 PPD5 ATDEF2 PSY PCB2 AtHBP5 ATCPN21 CaS HCF136 SQE5 MK ARRPS1 G6PD1 NDH18 ATFKBP13 CHL AMK2 ADG1 OVA2 CP31B AT5G51310 ATPGMP B2 AT5G52970 RPL24 AT5G55220 LUT2 NdhN AtcPT4 CLB4 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. DXR ATNDPK2 AT5G66470 ABA1"
GO:0006807 nitrogen compound metabolic process	BP	9.157e-58	LHY ASG4 ATCSLD5 ATWEE1 POR ATBARD1 AXR3 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase BDL LIP2 CTF18 emb2394 LPA19 UGT1 BT3 ATNTH2 EMB2784 ATPCNA1 ATLIG1 ADT6 ABC1 emb2411 AT1G09310 CRB ATGSTU18 ATGSTU17 AT1G10585 ATRECQ4A ATFD1 CRR22 ADT1 ATGLX1 AT1G11860 ATSRS AT1G12244 PHR1 AT1G12800 GAPA-2 AT1G13730 LSMT-L PnsL2 AT1G14345 AtMYB124 ATWHY1 AT1G14460 AT1G14600 AT1G15410 ATECB2 CYCA2;3 AT1G15710 CP24 AT1G15970 NDF1 AT1G16080 FUG1 GLYR2 AT1G18060 AT1G18090 AT1G18440 AT1G18485 AT1G18540 ATSOT17 NDF6 LHCA2*1 BES1 AT1G19490 ATCLH1 ATLFNR2 DRT112 AT1G20950 ATOGG1 AGL87 AT1G22630 AT1G23410 AOR MLP423 G6PD3 ATSOFL1 Cpn60beta4 AT1G26790 AT1G26880 AtHB23 ATHB54 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. SPL11 AT1G27480 AT1G28395 AT1G28530 SRD2 PSAK GlcNAc1pUT1 ATIMD3 AK-HSDH AT1G31690 CYP97A3 AT-IE AT1G31920 STRS1 PRK ACT1 NRT1.5 AT1G32470 ABCI7 FdC2 PRPL11 AT1G33110 At-FANCM AT1G35560 RPL21C AT1G36280 SHM7 ATNR2 GAPB ATCAO CP22 ATMCM2 Lhca5 DYW1 GATB RACK1B AT1G49010 AT1G49380 FTSH1 POLGAMMA2 GDC1 bHLH115 AT1G51080 AT1G51110 4CL.1 AT1G52220 PSAH-2 ABA2 AT1G52510 PLDALPHA2 SPA4 ATMUM4 AT1G54500 AtTLP18.3 AT1G55140 AT1G55260 AGP21 AT1G55360 NDF5 HAC04 AT1G56050 AT1G56190 ATNAS4 AT1G56500 AtMYB50 ATATP-PRT1 AtHEMA1 ZCF125 CRR28 EMB3108 AT1G60000 AT1G60590 ABC4 ARP2 AT1G62250 ACO2 FMO ATSCO1 AT1G62780 AT1G63470 ISPF AT1G64680 NDF2 RPOD1 AT1G64880 AT1G65070 AT1G65230 FMO ATGSR2 AtMYB20 AT1G66430 pde194 AT1G67690 PSBY CSK AT1G68260 AT1G68440 BBX14 CER6 PHO1;H1 STN7 PHYLLO FLN2 AT1G70000 AT1G70280 AOAT2 ABCB26 CRR23 AT1G71480 ANAC030 AT1G72270 AP40 LPA3 ATPIN1 BBX16 AT1G74070 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G75090 AT1G75150 emb2184 LQY1 PETE1 AT1G76450 ACR3 AT1G77090 AT1G77670 AT1G77750 GNR1 AT1G78010 ATGSTU20 AT1G78995 AT1G79150 AT1G80850 APG2 AT2G01210 RPI2 LCR68 ATMEPCT ATWHY3 OTP85 AT2G04790 EMB2761 AT2G05920 MCM5 AT2G13440 AT2G14285 ATHNIR BLH7 AT2G17630 AT2G17972 AAS AT2G20450 MEF21 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 AT2G21530 ATRL2 ATRNR1 AT2G21960 ATIPS2 CYP79B3 IAA8 CLF NAPRT2 ATMES3 YCF37 eIFiso4G2 AT2G24060 PRPL35 PDE319 AT2G24350 AT2G24580 ATWRKY60 ESE2 AT2G25830 OVA4 AtGLDP2 AT2G26500 ATCDPMEK AGO4 AT2G27680 AT2G27710 ADT3 ARF10 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 UXS6 AT2G29180 AT2G29360 PY MAPKKK14 PBCP AT2G30320 ATFC-II TCL2 RPT2 AT2G30695 TCP10 FIONA ATERF15 ATCDT1A BBX25 AT2G31670 MRL7-L AT2G32060 ATOFP16 PRORP1 ATCOP1 AT2G33180 DAL BUBR1 HMR ATHB-14 NF-YA4 EDA3 GDCH AT2G35410 SKL2 ATERF38 AT2G35760 AT2G36145 RPL24A MAT3 ATSIG6 ATPAL1 ADK AT2G37500 AS1 AT2G37660 PDX1L4 AT2G39240 SNZ ATRPL23A PnsL1 AT2G39670 LHCB4.3 AT2G40200 AT2G40400 HEME2 ETG1 ARR16 SSL2 ARR8 NTRC AT2G42220 ATLEUD1 AT2G43560 FAB2 UGT74F1 AT2G44040 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 KPHMT1 AT2G46250 SPA1 ATCB5-C PSAP AtCCA1 PHR2 AtCGS1 ATCYP38 ATBCA1 AT3G01660 AK3 EMB2768 ATF1 AT3G02820 ATGSTF11 ATMS2 GDH3 EMB3119 AT3G04840 ATRAD9 AT3G05560 RPL18 TRX AT3G07110 AT3G07270 ATYLMG1-1 AT3G07670 AT3G08740 AT3G09050 AT3G09200 PTAC13 AT3G09580 LCL5 ADK1 OMR1 GYRB1 AT3G10310 PAL4 AT3G10610 GYRA AT3G10760 AT3G10840 AT3G11510 CYC2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. AT3G11964 PGK1 AT3G12930 AT3G13000 AT3G13120 AT3G13180 ATKRS-2 AT3G13510 AGP12 ESM1 AT3G14330 AT3G14390 HEME1 PRPS20 AT3G15460 AT3G15520 ADS3 MFP1 AT3G16080 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. HCF107 ECT6 MAT4 HYH DAC WOX1 RACK1C EMB1865 ATUNG AtTic62 AT3G19030 AT3G19480 BCAT4 AT3G20010 AT3G20150 PSBTN ATPURC AtBBX32 GluTRBP BBX31 AT3G22150 AT3G22210 ATTSO1 ELIP bHLH34 ATSAHH2 ATTOPII AT3G23940 ATGR1 HCF101 PLSP1 ATL5 CRF11 RPL15 ATPRX AT3G26450 GAPA CCB1 DRB3 ATTSO2 AT3G27180 AT3G27640 EMB3123 DEG1 ATCM1 CHR38 ATGSTU27 anac061 AT3G44590 AT3G44740 ATHD2A ATMYB48 PTAC16 DUT1 AT3G47070 PEX11B AT3G47650 AT3G47830 EDD AT3G48200 AT3G48420 AT3G48425 AT3G48440 GSA2 AT3G48830 ATBBC1 DMS3 AT3G49640 ATBCAT-3 ICK2 OEC33 AT3G51140 AT3G51280 ATG4 AT3G51950 FTSZ2-2 CYP97C1 ATPAL2 AT3G53680 PYRR HCEF1 AT3G54390 AT3G54400 ATGR2 AT3G54750 PPL1 ATTSC13 OVA1 ATDFD SBPASE AT3G56010 AT3G56290 AT3G56300 AT3G56680 BHLH038 BHLH039 AT3G57010 AT3G57020 AT3G57030 ARR9 BPG2 PrfB3 NAGK ADSS GIS AT3G58140 IPMI1 GUN4 ATRAD21.2 AT3G59780 AT3G59890 MTHFR1 ATHAM2 AT3G60750 AT3G61080 ARATH;BSAS3;1 AT3G61870 AT3G61950 CYP20-3 APG3 ATIPT3 CSP41A AtcpRRF OTP86 EMB3126 AT3G63510 AT3G66652 BRCA2(IV) UNE10 ATHAM3 ANTR2 AT4G00895 MEE47 TROL HEMG1 MCM7 AT4G02530 EMB3129 AT4G03090 PETC EMB2369 APR ATPC1 ATMSRB5 ARGAH2 APX4 ATNDK1 ATPD AT4G10450 AT4G10600 NDPK3 AT4G11100 AT4G11175 AT4G12600 AT4G12830 EPFL9 CYP83A1 SHM4 ATSAHH1 AtPRD1 AT4G14200 NF-YB3 AO1 AT4G15000 AT4G15430 CYP74B2 IAGLU AtCLA1 AT4G15640 AT4G16141 SVR7 ATNS1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 AT4G17560 LIL3:1 MYC4 DEG5 AT4G18440 AT4G18460 CH-42 AT4G18810 AG CMT2 PAM68 CYCT1;2 AK-HSDH PTAC14 PyrD PSBQ AT4G21770 APT3 PGR5-LIKE CCS52A1 AESP AT4G23670 AT4G24090 AT4G24350 TAR2 AT4G24750 ATRBP31 AT4G24790 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) AT4G24830 ACP4 CHLM SKS1 AT4G25290 ATFIB2 AtFBA7 AT4G26660 AR192 AT4G27700 EMB1923 MRL7 AT4G28740 AT4G28780 emb2726 ATHMA2 AHA2 AT4G30800 AT4G30825 FAD6 LRL2 ACDO1 PGR3 PDE334 ATBT1 Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development. ATSDX1 ATH1 AtGLDP1 AT4G33400 ATHDA14 AtHMAC6 AGD2 AT4G33760 AT4G34090 SEP1 EDA9 BLH6 AT4G34730 ASE2 MRL1 HCF244 AT4G35270 ATSERAT3;2 MCA1 GATA7 BGAL3 ATRL3 ATHMA1 SHM1 pde191 ATMYB4 ROC1 BBX19 AtFBA2 AT4G39040 SAMC1 AT4G39630 ATIPS1 AKN2 SQD2 ATPDX1 ATOFP1 LCL1 AT5G02870 ADK2 AtNCS1 SBE2.2 PTL 54CP GYRB2 ATPAL3 SIR AT5G04840 ATNAS1 EMB2771 AT5G05790 UGT76C2 2-Cys AT5G06770 AT5G07020 AT5G07090 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. SMC6A ATMYB29 ATRPA70B AT5G08050 HEMC AGAL2 PDE340 AT5G08650 AT5G09240 AtPPa6 PMDH2 AT5G10605 AT5G10620 AT5G10690 AT5G10920 APT5 HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 TINY2 ATTERC DiT1 ATGSL12 ABAP1 ATCYP20-2 AT5G13140 EMB3136 ABAR SVR3 CARAB-AK-LYS ATIMD1 AO AT-P5C1 AtbZIP3 ATCOL1 AT5G16130 AtMYB43 EMB2247 ENH1 PSY RVE1 AT5G17660 ATOBGC PCB2 AGP25 ADG2 AT5G19240 ATMGD2 ATCPN21 CRR42 AT5G21060 AT5G21100 ATCKX5 AT5G22340 anac090 AT5G22440 EMB1030 IMS3 IMS2 CaS HCF136 AT5G23480 ATSIG5 PGL5 LSU2 CRY3 ESE3 AT5G25590 tny SHM2 AT5G27390 AT5G28500 ARRPS1 AT5G35170 ATGSL1 G6PD1 AT5G35970 atylmg3 ARF8 CIR1 CML24 ASF1B AT5G38520 CRR7 CDF2 OLI7 AT5G40060 UPM1 DRB5 AT5G41760 AT5G42070 ATS CYCA3;1 AT5G43150 NF-YC13 TZP SDG18 AT5G44520 MCM6 AT5G44680 ATFKBP13 AT5G45720 CHL AT5G46220 MCM3 AT5G46390 AT5G46580 bHLH071 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT5G47620 NF-YB2 AMK2 AT5G47970 ADG1 AT5G48360 HINT3 ATPTS LPA66 OVA2 ATMYB111 MMT AT5G50110 CP31B FSD2 AT5G51110 At-NEET ATPGMP AT5G52010 OVA6 AT5G52780 AT5G52950 AT5G52970 TRY AtPLR1 ATOMT1 PTAC15 AT5G55220 ATFTSZ1-1 CRR21 AT5G56840 AT5G56850 APO2 NPL1 NdhN AT5G58330 DDB2 AT5G59600 AT5G59740 AtRIBA3 AT5G59850 AT5G60130 CLB4 ATMYB34 ATRPA70D PDCB1 AtMYB28 AGL42 ANAC101 CDF1 AHA11 DXR AT5G62840 ARR6 ATNDPK2 ATRMI1 GSA1 AT5G63700 ATERS DCT ATGCH EMB3144 ASN2 ATLFNR1 AT5G66470 AT5G66520 ATDDM1 AT5G66770 ICU2 AT5G67200 MATK
GO:0042440 pigment metabolic process	BP	1.294e-56	POR encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase LIP2 CCR2 ABC1 CRB AT1G11860 AT1G12800 NDF1 AT1G16080 AT1G18440 NDF6 ATCLH1 AOR UGT78D1 CYP97A3 ACT1 PRPL11 AT1G36280 GAPB ATCAO AT1G49380 AtTLP18.3 ZKT CPN60B AT1G56050 AT1G56500 AT1G57770 AtHEMA1 AT1G62250 ISPF 4CL3 AT1G65230 CER6 STN7 ABCB26 AT1G71480 AT1G73110 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. emb2184 AT1G76450 AT1G80030 AHK4 ATMEPCT Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA AtFBA1 AT2G21385 ATIPS2 CYP711A1 ATCDPMEK AT2G27680 ARF10 ATFC-II AT2G32640 ATCOP1 EDA3 AT2G35410 SKL2 AT2G35760 ATSIG6 AT2G37660 AT2G40400 HEME2 ARR8 NTRC FAB2 AT2G44920 PHR2 ATCYP38 ATPPT2 AT3G03770 ATHST AT3G13120 PRPS20 ADS3 EMB1865 GluTRBP UGT84A2 ELIP bHLH34 HCF101 ATPRX ORF02 DEG1 PTAC16 AT3G48420 GSA2 AT3G50685 ATG4 CYP97C1 HCEF1 AT3G56680 GUN4 AT3G59780 AT3G61080 AT3G61870 CYP20-3 APG3 CSP41A TROL AT4G02530 ATPC1 APX4 ATPD The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. PDE226 AtCLA1 LIL3:1 MYC4 AT4G18440 CH-42 APT3 CHLM B1 emb2726 FAD6 ACDO1 ATH1 AtGLDP1 SEP1 ASE2 HCF244 AtFBA2 AT4G39040 SQD2 FD-GOGAT AtCHIL UGT76C2 AT5G07020 AT5G08050 HEMC ATFLS1 AT5G08650 PMDH2 APT5 HY5 ABAR ATCHS UGT78D2 PSY PCB2 AtHBP5 HCF136 ARRPS1 AT5G35970 UPM1 AT5G43150 ABCI21 ATFKBP13 CHL AMK2 OVA2 ATMYB111 B2 AT5G52970 ATOMT1 AT5G55220 LUT2 NdhN CLB4 DXR GSA1 ABA1
GO:1901566 organonitrogen compound biosynthetic pro...	BP	3.968e-55	POR LIP2 EMB2784 ADT6 AT1G09310 CRB ADT1 ATGLX1 AT1G11860 ATSRS AT1G12800 LSMT-L AT1G15710 CP24 AT1G18440 ATSOT17 NDF6 DRT112 AOR AT1G28395 AT1G28530 PSAK ATIMD3 AK-HSDH CYP97A3 AT-IE PRK ACT1 AT1G32470 ABCI7 PRPL11 AT1G33110 AT1G36280 GAPB ATCAO CP22 RACK1B bHLH115 AT1G51110 PSAH-2 ABA2 AtTLP18.3 AT1G55260 AGP21 AT1G55360 AT1G56050 AT1G56190 ATNAS4 ATATP-PRT1 AtHEMA1 EMB3108 AT1G60000 ACO2 FMO ISPF AT1G64880 ATGSR2 AT1G66430 pde194 PSBY AT1G68260 CER6 FLN2 AT1G70280 AOAT2 LPA3 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. emb2184 PETE1 AT1G76450 ACR3 AT1G77670 ATGSTU20 AT1G79150 LCR68 ATMEPCT AT2G05920 ATHNIR AT2G17630 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AtFBA1 CYP79B3 NAPRT2 ATMES3 AT2G24060 AT2G25830 ATCDPMEK AT2G27680 ADT3 PY ATFC-II RPT2 AT2G30695 AT2G31670 AT2G33180 EDA3 GDCH AT2G35410 SKL2 MAT3 ADK AT2G37500 AT2G37660 PDX1L4 PnsL1 AT2G40400 HEME2 SSL2 NTRC AT2G42220 ATLEUD1 FAB2 AT2G44040 CHL-CPN10 AT2G44920 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 KPHMT1 ATCB5-C AtCGS1 ATCYP38 AK3 ATMS2 EMB3119 AT3G04840 RPL18 AT3G07270 ATYLMG1-1 AT3G08740 ADK1 OMR1 AT3G10610 GYRA Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 AT3G14390 HEME1 PRPS20 AT3G15460 ADS3 ECT6 MAT4 RACK1C AT3G19030 AT3G19480 BCAT4 ATPURC GluTRBP ELIP ATSAHH2 AT3G23940 HCF101 ATL5 ATPRX AT3G26450 ATCM1 ATHD2A PTAC16 GSA2 AT3G51140 ATG4 FTSZ2-2 CYP97C1 PYRR HCEF1 AT3G54400 ATTSC13 ATDFD SBPASE AT3G56680 AT3G57010 AT3G57020 AT3G57030 NAGK ADSS IPMI1 GUN4 AT3G59890 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 APG3 CSP41A AtcpRRF EMB3126 AT4G00895 TROL HEMG1 AT4G02530 APR ATPC1 ATMSRB5 APX4 ATNDK1 ATPD NDPK3 AT4G12600 CYP83A1 CYP74B2 AtCLA1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 LIL3:1 AT4G18440 CH-42 AK-HSDH PyrD APT3 AT4G23670 TAR2 ATRBP31 AT4G24830 CHLM ATFIB2 AR192 ATHMA2 AHA2 FAD6 PDE334 ATH1 AtGLDP1 AtHMAC6 AGD2 SEP1 EDA9 ASE2 ATSERAT3;2 MCA1 ATHMA1 ROC1 AtFBA2 AT4G39040 ATIPS1 AKN2 SQD2 ATPDX1 AT5G02870 ADK2 AtNCS1 SIR ATNAS1 AT5G07090 AT5G08050 HEMC PDE340 AT5G08650 AtPPa6 PMDH2 AT5G10920 APT5 ATCYP20-2 AT5G13140 ABAR CARAB-AK-LYS ATIMD1 AO AT-P5C1 PSY PCB2 AGP25 AT5G19240 ATCPN21 AT5G21060 AT5G21100 AT5G22340 IMS3 IMS2 CaS HCF136 AT5G27390 ARRPS1 ATGSL1 OLI7 UPM1 AT5G41760 ATFKBP13 CHL AT5G46580 TET1 PYL1 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. ATPTS AT5G51110 AT5G52970 AtPLR1 ATFTSZ1-1 APO2 AtRIBA3 CLB4 ATMYB34 PDCB1 AHA11 DXR ATNDPK2 GSA1 ATGCH ASN2
GO:0032787 monocarboxylic acid metabolic process	BP	1.120e-54	AT1G01080 KCS1 ATGPAT4 POR KCS2 AT1G04420 LIP2 KAT1 emb2394 UGT1 AT1G06550 EMB2784 KCS3 ABC1 CJD1 CRB ATFD1 ATGLX1 AT1G12800 GAPA-2 AT1G13650 LSMT-L AT1G14270 AT1G14345 UP6 FUG1 ATSOT17 LHCA2*1 JMT ATLFNR2 AT1G20950 AOR Cpn60beta4 IMPL1 CYP97A3 PRK ACT1 ABCI7 FdC2 PRPL11 GAPB AT1G44920 AT1G49380 LACS2 GDC1 ABA2 mMDH1 AT1G54220 AtTLP18.3 AT1G55260 AT1G56190 ATNAS4 AT1G56500 ABC4 ACO2 FMO AT1G62780 ISPF BDG1 AT1G65230 ATGSR2 AT1G66430 AT1G67690 CER6 PSRP3/1 ATBCA4 AOAT2 AP40 EDA17 ENO1 AT1G74070 ATSOT18 emb2184 ACR3 AT1G77090 LACS9 AT1G77670 ATGSTU20 ATMEPCT KCS9 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 CYP79B3 ATMES7 ACL YCF37 AT2G24020 AT2G24060 ATWRKY60 AT2G25530 PYL2 FDH ATCDPMEK AT2G27680 PY ANTR1 AtFAD3 ATFC-II AT2G30695 PRPL28 EDA3 GDCH AT2G35410 SKL2 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 PGP1 RCA ATCAMBP25 NTRC AT2G42130 ATLEUD1 AT2G43560 FAB2 UGT74F1 CHL-CPN10 AT2G44920 ATCB5-C PHR2 ATCYP38 ATBCA1 ATF1 VTC4 ATGSTF11 RGL2 EMB3119 AT3G07670 ATERDJ3A PTAC13 AtFAD7 ATBSMT1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G13120 ESM1 HEME1 AT3G15520 ADS3 MFP1 NDF4 AT3G16370 AAE7 RFC3 EMB1865 BCAT4 HCF101 AT3G25805 GAPA CCB1 AAO2 LTPG2 RPL9 AT3G47650 DCF ATG4 PSRP2 CP33 CYP97C1 AT3G54210 SBPASE AT3G56010 AT3G58140 AT3G59780 AT3G60750 ATPIP1 ARATH;BSAS3;1 AT3G61870 CYP20-3 AtcpRRF APG1 EMB3126 AT3G63510 ATT1 TROL AT4G02530 EMB3129 PETC APR ATPC1 APX4 ATPD AT4G10300 CYP83A1 ATSAHH1 ATECI3 CYP97B3 CYP74B2 IAGLU AtCLA1 AT4G17560 LIL3:1 CH-42 ATRAB8D TAR2 AT4G24750 ACP4 CHLM B1 AtFBA7 FAD4 PSB28 emb2726 AT4G30620 FAD6 PGR3 PDE334 ATSDX1 ATH1 AtGLDP1 ATHDA14 AT4G34090 SEP1 CLB6 MRL1 HCF244 SHM1 AtFBA2 AT4G39040 AKN2 SQD2 AtHsp70-2 AT-HSC70-1 SBE2.2 54CP FD-GOGAT SIR ATNAS1 AtFAD8 ATEGY2 2-Cys HEMC AT5G08650 AtPPa6 PMDH2 AT5G10690 PPD5 ATDEF2 PSY PCB2 AT5G19240 AT5G19760 ATMGD2 ATCPN21 IMS3 IMS2 CaS ARRPS1 ATGSL1 G6PD1 OLI7 NDH18 KCS20 AT5G44520 ATFKBP13 CHL AT5G45950 PYL1 Encodes the mitochondrial ATP synthase subunit delta. LIL3:2 AT5G47970 ADG1 CP31B ATPGMP B2 AT5G52970 RPL24 ANK AT5G55220 CER3 CLB4 DXR ATNDPK2 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. ATLFNR1 AT5G66470 ABA1 EPS1
GO:0008610 lipid biosynthetic process	BP	6.485e-54	AT1G01080 KCS1 ATGPAT4 ATGPAT2 AtD27 POR KCS2 AT1G04420 LIP2 emb2394 CCR2 EMB2784 KCS3 ABC1 CRB iPGAM1 Z-ISO ATFD1 AT1G11860 ATNRT1 AT1G12800 AT1G13650 LSMT-L AT1G14270 AT1G14345 ATGA3OX1 NDF1 AT1G16080 FUG1 LHCA2*1 AT1G20950 AOR GATL8 Cpn60beta4 CYP97A3 ACT1 FdC2 GBSS1 PRPL11 GAPB AT1G44920 AT1G49380 LACS2 AtCXE5 GDC1 ABA2 AtTLP18.3 ZKT CPN60B AT1G56500 AT1G57770 ABC4 AT1G62780 ISPF BDG1 AT1G65230 AT1G66180 AT1G68240 CER6 PSRP3/1 PHO1;H1 AT1G72430 AT1G73110 AT1G74070 emb2184 AtGH9B7 AT1G77090 LACS9 AT1G80030 ATMEPCT FLA7 KCS9 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21860 ATIPS2 CYP79B3 YCF37 AT2G24060 HHP3 CYP711A1 FDH NPC2 ATCDPMEK AT2G27680 PY AtFAD3 ATFC-II AT2G30695 AT2G32640 ATCB5-B PRPL28 CYP710A2 EDA3 AT2G35410 SKL2 ATSIG6 AT2G37660 PGP1 GLY1 NTRC AT2G42130 ATPPC2 NPG1 AT2G43560 FAB2 AT2G44920 PHR2 AtSS2 ATCYP38 EMB2768 ATF1 ATGSTF11 RGL2 EMB3119 AT3G07670 ATERDJ3A PTAC13 AtFAD7 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST PGK1 AT3G12930 AT3G13120 ESM1 AT3G15520 ADS3 MFP1 NDF4 EMB1865 GLTP3 AT3G23510 AT3G23530 HCF101 AAPT2 AT3G25660 AT3G25805 ATPRX ORF02 CCB1 AAO2 RPL9 PTAC16 AT3G47650 AT3G48420 AT3G50685 ATG4 PSRP2 CP33 ELL1 CYP97C1 HCEF1 AT3G54210 ATTSC13 SBPASE AT3G56010 UGP3 AT3G57010 AT3G58140 GUN4 AT3G59780 CDS5 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 APG3 AtcpRRF APG1 EMB3126 TROL ATGPAT3 AT4G02530 EMB3129 ATPC1 CLS APX4 ATPD ATSPS4F AT4G10300 CYP83A1 PDE226 CYP97B3 AtCLA1 SPK1 AT4G17560 LIL3:1 AT4G17740 CH-42 PTAC14 sks4 AtDIR6 AT4G24750 ACP4 CHLM B1 AT4G25870 FAD4 PSB28 emb2726 FAD6 PGR3 ATH1 AtGLDP1 SQD1 AT4G33110 ATHDA14 AT4G34090 SEP1 CLB6 SQS2 MRL1 HCF244 MCA1 ROT3 AtGGPPS11 MAP1D LBD39 SQE3 AtFBA2 AT4G39040 ATIPS1 SQD2 Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. SBE2.2 54CP FD-GOGAT SIR AtFAD8 ATEGY2 AT5G07020 ERL2 HEMC AT5G08650 PMDH2 ATMIPS3 AT5G10690 PPD5 DiT1 ATDEF2 AtENODL17 PSY PCB2 AtHBP5 ATMGD2 ATCPN21 AT5G21100 CaS HCF136 SQE5 AT5G24155 ATSS1 MK ARRPS1 G6PD1 NDH18 KCS20 AT5G45280 ATFKBP13 CHL AMK2 ADG1 OVA2 CP31B AT5G51310 ATPGMP B2 AT5G52970 ATOMT1 RPL24 AT5G55220 AT5G56040 LUT2 NdhN AtcPT4 CLB4 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. DXR ATNDPK2 ANNAT2 AT5G66470 ABA1
GO:0006091 generation of precursor metabolites and ...	BP	5.682e-53	LPA1 POR AT1G05140 emb2394 LPA19 CRB ATFD1 ATGLX1 ATSRS GAPA-2 PnsL2 AT1G14270 AT1G14345 CP24 NDF1 HCF173 ACR11 NDF6 LHCA2*1 ATLFNR2 AT1G20950 AT1G29700 AB165 PRK AT1G32470 ABCI7 FdC2 RPL21C GAPB CP22 Lhca5 FTSH1 AT1G52220 PSAH-2 mMDH1 AT1G54500 AtTLP18.3 NDF5 AT1G56190 AT1G56500 CCB4 ABC4 ATFD2 ACO2 ATSCO1 AT1G63610 NDF2 ATGSR2 AT1G66430 PSBY STN7 PHYLLO CRR23 AP40 LPA3 ENO1 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. NDH-O emb2184 LQY1 PETE1 AMY2 APG2 CRR3 LHCB2 PGR5 PSB29 AtFBA1 AT2G21530 SEP2 AT2G26500 PBCP AT2G30695 ARASP DAL EDA3 GDCH SKL2 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AT2G37660 PnsL1 RCA LHCB4.3 AT2G42220 ATPPC2 AT2G43560 AT2G43945 PSAP RPH1 PnsL3 ATCYP38 ATBCA1 EMB3119 IDH-VI Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 ADS3 NDF4 HCF107 DAC AtTic62 PSBTN GluTRBP PLSP1 GAPA CCB1 DEG1 AtKIN14h PTAC16 AT3G47650 AT3G48420 OEC33 PSRP2 HCEF1 PPL1 SBPASE PrfB3 GUN4 CDS5 AT3G60750 ATPIP1 ARATH;BSAS3;1 AT3G61870 CYP20-3 CSP41A TROL AT4G02530 PETC FIB ATPC1 APX4 ATPD ATSAHH1 PPD1 AT4G16980 LIL3:1 DEG5 PAM68 PSBQ AT4G22830 PGR5-LIKE ACP4 AT4G25830 AtFBA7 PSB28 FAD6 PDE334 AtHMAC6 SEP1 HCF244 SHM1 AtFBA2 SAMC1 STN8 OHP AT-HSC70-1 FD-GOGAT SIR 2-Cys AT5G08050 HEMC AT5G08400 AtPPa6 PMDH2 APT5 EMB3136 ABAR ENH1 ADG2 ATOEP80 AT5G19760 ATGER3 ATCPN21 CRR42 CaS HCF136 ATSIG5 AT5G27560 ARRPS1 AT5G35170 AMOS1 ATGSL1 AT5G38520 APE1 CRR7 OLI7 DEG8 ARC6 AT5G44520 AtCEST CHL Encodes the mitochondrial ATP synthase subunit delta. LIL3:2 AMK2 AT5G48790 ATFRO7 CP31B ATRBOHC AT5G51110 AT5G52780 LUT2 NPL1 NdhN AT5G58330 AT5G59250 CLB4 ATLFNR1 MATK
GO:0046148 pigment biosynthetic process	BP	5.677e-52	POR LIP2 CCR2 ABC1 CRB AT1G11860 AT1G12800 NDF1 AT1G16080 AT1G18440 NDF6 AOR UGT78D1 CYP97A3 ACT1 PRPL11 AT1G36280 GAPB ATCAO AT1G49380 AtTLP18.3 ZKT CPN60B AT1G56050 AT1G56500 AT1G57770 AtHEMA1 ISPF 4CL3 AT1G65230 CER6 AT1G73110 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. emb2184 AT1G76450 AT1G80030 ATMEPCT Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA AtFBA1 AT2G21385 CYP711A1 ATCDPMEK AT2G27680 ARF10 ATFC-II AT2G32640 EDA3 AT2G35410 SKL2 ATSIG6 AT2G37660 AT2G40400 HEME2 NTRC FAB2 AT2G44920 PHR2 ATCYP38 ATPPT2 AT3G03770 ATHST AT3G13120 PRPS20 ADS3 EMB1865 GluTRBP UGT84A2 ELIP bHLH34 HCF101 ATPRX ORF02 PTAC16 AT3G48420 GSA2 AT3G50685 ATG4 CYP97C1 HCEF1 AT3G56680 GUN4 AT3G59780 AT3G61870 CYP20-3 APG3 CSP41A TROL AT4G02530 ATPC1 APX4 ATPD The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. PDE226 AtCLA1 LIL3:1 MYC4 AT4G18440 CH-42 APT3 CHLM B1 emb2726 FAD6 ATH1 AtGLDP1 SEP1 ASE2 HCF244 AtFBA2 AT4G39040 SQD2 FD-GOGAT AtCHIL AT5G07020 AT5G08050 HEMC ATFLS1 AT5G08650 PMDH2 APT5 ABAR ATCHS UGT78D2 PSY PCB2 AtHBP5 HCF136 ARRPS1 UPM1 ABCI21 ATFKBP13 CHL AMK2 OVA2 ATMYB111 B2 AT5G52970 ATOMT1 AT5G55220 LUT2 NdhN CLB4 DXR GSA1 ABA1
GO:1901360 organic cyclic compound metabolic proces...	BP	3.182e-51	LHY KCS1 ASG4 ATCSLD5 ATWEE1 AtD27 POR ATBARD1 KCS2 AXR3 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase BDL LIP2 KAT1 CTF18 emb2394 LPA19 UGT1 BT3 ATNTH2 ATPCNA1 ATLIG1 ADT6 ABC1 emb2411 CRB similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase iPGAM1 ATGSTU18 AT1G10585 ATRECQ4A ATFD1 CRR22 ADT1 ATSRS ATNRT1 AT1G12244 PHR1 AT1G12800 GAPA-2 AT1G13730 LSMT-L PnsL2 AT1G14345 AtMYB124 ATWHY1 AT1G14460 AT1G14600 ATECB2 CYCA2;3 AT1G15710 AT1G15970 NDF1 AT1G16080 FUG1 GLYR2 AT1G18060 AT1G18090 AT1G18440 AT1G18485 AT1G18540 ATSOT17 NDF6 LHCA2*1 BES1 AT1G19490 ATCLH1 ATLFNR2 DRT112 AT1G20950 ATOGG1 AGL87 AT1G22630 AT1G23410 AOR MLP423 GATL8 G6PD3 Cpn60beta4 AT1G26790 AT1G26880 AtHB23 ATHB54 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. SPL11 AT1G27480 AT1G28395 AT1G28530 SRD2 GlcNAc1pUT1 CYP97A3 AT-IE AT1G31920 STRS1 PRK ATPRR1 ACT1 NRT1.5 AT1G32470 ABCI7 FdC2 PRPL11 AtGXMT1 At-FANCM AT1G35560 RPL21C AT1G36280 GAPB ATCAO CP22 ATMCM2 Lhca5 DYW1 GATB RACK1B AT1G49010 AT1G49380 AtCXE5 FTSH1 POLGAMMA2 GDC1 bHLH115 AT1G51080 AT1G51110 4CL.1 AT1G52220 PSAH-2 ABA2 AT1G52510 SPA4 ATMUM4 AT1G54500 AtTLP18.3 AT1G55140 AT1G55210 NDF5 HAC04 AT1G56050 ATNAS4 AT1G56500 AtMYB50 ATATP-PRT1 AT1G58170 AtHEMA1 ZCF125 CRR28 EMB3108 AT1G60590 ABC4 ARP2 AT1G62250 ACO2 FMO ATSCO1 AT1G62780 AT1G63470 ISPF AT1G64680 NDF2 RPOD1 AT1G64880 G-TMT 4CL3 AT1G65070 AT1G65230 AT1G65870 AT1G66180 ATGSR2 AtMYB20 pde194 AT1G67690 PSBY CSK AT1G68440 BBX14 CER6 PHO1;H1 STN7 FLN2 AT1G70000 AT1G70280 ABCB26 CRR23 AT1G71480 ANAC030 AT1G72270 AP40 AT1G72430 LPA3 ATPIN1 BBX16 AT1G74070 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G75090 AT1G75150 emb2184 AtGH9B7 LQY1 AT1G76450 AT1G77090 AT1G77750 AT1G78010 ATGSTU20 AT1G78995 AT1G79150 AT1G80850 APG2 AT2G01210 RPI2 ATMEPCT ATWHY3 OTP85 FLA7 AT2G04790 EMB2761 AT2G05920 MCM5 AT2G13440 AT2G14285 BLH7 AT2G17972 AAS AT2G20450 MEF21 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 AT2G21530 ATRL2 ATRNR1 AT2G21860 AT2G21960 ATIPS2 CYP79B3 IAA8 CLF NAPRT2 ATMES7 ACL YCF37 eIFiso4G2 AT2G24060 PRPL35 PDE319 HHP3 AT2G24350 AT2G24580 ATWRKY60 ESE2 AT2G25830 OVA4 CYP711A1 AT2G26500 ATCDPMEK AGO4 AT2G27680 AT2G27710 ADT3 ARF10 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 UXS6 AT2G29180 AT2G29360 PY ANTR1 MAPKKK14 PBCP AT2G30320 ATFC-II TCL2 AT2G30695 TCP10 FIONA ATERF15 ATCDT1A BBX25 AT2G31670 MRL7-L AT2G32060 ATOFP16 PRORP1 ATCB5-B ATCOP1 AT2G33180 DAL BUBR1 CYP710A2 HMR ATHB-14 NF-YA4 EDA3 GDCH AT2G35410 SKL2 ATERF38 AT2G35760 AT2G36145 RPL24A DOGT1 MAT3 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ADK AT2G37500 AS1 AT2G37660 PDX1L4 AT2G39240 SNZ ATRPL23A PnsL1 AT2G39670 RCA LHCB4.3 AT2G40200 AT2G40400 HEME2 ETG1 ARR16 ATCAMBP25 ARR8 NTRC NPG1 ATLEUD1 AT2G43560 FAB2 UGT74F1 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis AT2G46250 SPA1 ATCB5-C PSAP AtCCA1 PHR2 ATCYP38 ATBCA1 AT3G01660 EMB2768 ATF1 AT3G02820 ATGSTF11 EMB3119 AT3G04840 ATRAD9 AT3G05560 RPL18 TRX AT3G07110 AT3G07270 ATYLMG1-1 AT3G07670 AT3G09050 AT3G09200 PTAC13 AT3G09580 LCL5 ADK1 GYRB1 AT3G10310 PAL4 AT3G10610 GYRA AT3G10760 AT3G10840 AT3G11510 CYC2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. AT3G11964 PGK1 AT3G12930 AT3G13000 AT3G13120 AT3G13180 ATKRS-2 AT3G13510 AGP12 ESM1 AT3G14330 HEME1 PRPS20 AT3G15460 AT3G15520 ADS3 MFP1 AT3G16080 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. HCF107 ECT6 MAT4 HYH DAC WOX1 RACK1C EMB1865 ATUNG AtTic62 AT3G19030 ATCAD4 BCAT4 AT3G20010 AT3G20150 PSBTN ATPURC AtBBX32 GluTRBP 4CL2 UGT84A2 BBX31 AT3G22150 AT3G22210 ATTSO1 ELIP bHLH34 MED33A ATTOPII AT3G23940 HCF101 PLSP1 ATL5 CRF11 RPL15 ATPRX GAPA CCB1 DRB3 ATTSO2 AT3G27180 AT3G27640 EMB3123 DEG1 ATCM1 CHR38 anac061 AT3G44590 AT3G44740 ATHD2A ATMYB48 PTAC16 DUT1 AT3G47070 PEX11B AT3G47650 AT3G47830 EDD AT3G48200 AT3G48420 AT3G48425 AT3G48440 DCF GSA2 AT3G48830 ATBBC1 DMS3 AT3G49640 ICK2 OEC33 AT3G51140 AT3G51280 ATG4 AT3G51950 FTSZ2-2 ELL1 CYP97C1 ATPAL2 AT3G53680 PYRR HCEF1 AT3G54390 AT3G54750 PPL1 ATTSC13 OVA1 ATDFD SBPASE AT3G56010 AT3G56290 AT3G56300 AT3G56680 BHLH038 BHLH039 AT3G57010 ARR9 BPG2 PrfB3 NAGK ADSS GIS AT3G58140 GUN4 ATRAD21.2 AT3G59780 ATHAM2 AT3G61080 ARATH;BSAS3;1 AT3G61870 AT3G61950 CYP20-3 APG3 ATIPT3 CSP41A AtcpRRF OTP86 APG1 EMB3126 AT3G63510 AT3G66652 BRCA2(IV) UNE10 ATHAM3 ANTR2 AT4G00895 MEE47 TROL GT72B1 HEMG1 MCM7 AT4G02530 EMB3129 AT4G03090 PETC EMB2369 APR ATPC1 ARGAH2 APX4 ATNDK1 ATPD AT4G10450 AT4G10600 NDPK3 AT4G11100 AT4G11175 AT4G12600 AT4G12830 EPFL9 CYP83A1 ATSAHH1 AtPRD1 AT4G14200 NF-YB3 AT4G15000 AT4G15430 CYP74B2 IAGLU AtCLA1 AT4G15640 AT4G16141 SPK1 SVR7 ATNS1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 AT4G17560 LIL3:1 MYC4 DEG5 AT4G18440 CH-42 AT4G18810 AG CMT2 PAM68 CYCT1;2 AK-HSDH PTAC14 PyrD PSBQ AT4G21770 sks4 APT3 PGR5-LIKE CCS52A1 AESP AtDIR6 AT4G24090 AT4G24350 TAR2 AT4G24750 ATRBP31 AT4G24790 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) AT4G24830 ACP4 CHLM SKS1 AT4G25290 ATFIB2 AT4G25870 AtFBA7 AT4G26660 AR192 AT4G27700 EMB1923 MRL7 AT4G28740 AT4G28780 emb2726 ATHMA2 AHA2 AT4G30470 AT4G30800 AT4G30825 FAD6 LRL2 ACDO1 PGR3 PDE334 ATBT1 Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development. ATSDX1 ATH1 AtGLDP1 AT4G33400 ATHDA14 AtHMAC6 AT4G33760 AT4G34090 SEP1 BLH6 SQS2 AT4G34730 ASE2 MRL1 HCF244 AT4G35270 GATA7 BGAL3 ROT3 ATRL3 AT4G36640 ATHMA1 LBD39 SQE3 SHM1 pde191 ATMYB4 BBX19 AtFBA2 AT4G39040 ATCAD9 SAMC1 AT4G39630 AKN2 LAC8 LAC10 SQD2 ATPDX1 ATOFP1 Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AtHsp70-2 LCL1 AT5G02870 LAC11 ADK2 AtNCS1 SBE2.2 PTL 54CP GYRB2 FD-GOGAT ATPAL3 SIR AT5G04840 ATNAS1 EMB2771 AT5G05790 2-Cys AT5G06770 AT5G07020 AT5G07090 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. SMC6A ATMYB29 ATRPA70B AT5G08050 HEMC PDE340 AT5G08650 AT5G09240 AtPPa6 PMDH2 AT5G10605 AT5G10620 AT5G10690 AT5G10920 APT5 HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 TINY2 ATTERC DiT1 ATGSL12 ABAP1 EMB3136 ABAR SVR3 ATCHS AO AT-P5C1 AtENODL17 AtbZIP3 ATCOL1 AT5G16130 AtMYB43 EMB2247 ENH1 PSY RVE1 AT5G17660 ATOBGC PCB2 ADG2 AT5G19240 ATMGD2 CRR42 AT5G21100 AT5G22340 anac090 AT5G22440 EMB1030 IMS3 IMS2 CaS HCF136 AT5G23480 ATSIG5 SQE5 AT5G24155 PGL5 LSU2 AT5G24760 CRY3 ESE3 AT5G25590 tny AT5G27390 AT5G28500 ARRPS1 AT5G35170 ATGSL1 G6PD1 AT5G35970 atylmg3 ARF8 CIR1 ASF1B AT5G38520 CRR7 CDF2 OLI7 AT5G40060 UPM1 DRB5 AT5G41760 AT5G42070 ATS CYCA3;1 AT5G43150 NF-YC13 TZP SDG18 AT5G44520 MCM6 AT5G44680 AT5G45280 ATFKBP13 AT5G45720 CHL MCM3 AT5G46390 AT5G46580 bHLH071 PYL1 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT5G47620 NF-YB2 AMK2 AT5G47970 ADG1 AT5G48360 HINT3 LPA66 HCT OVA2 ATMYB111 MMT AT5G50110 CP31B FSD2 AT5G51110 At-NEET ATPGMP AT5G52010 OVA6 AT5G52780 AT5G52950 AT5G52970 TRY AtPLR1 ATOMT1 PTAC15 ANK AT5G55220 ATFTSZ1-1 CRR21 AT5G56040 AT5G56840 AT5G56850 APO2 NPL1 NdhN AT5G58330 DDB2 AT5G59600 AT5G59740 AtRIBA3 AT5G59850 ATLAC17 AT5G60130 CLB4 ATMYB34 ATRPA70D AtMYB28 AGL42 ANAC101 CDF1 AHA11 DXR AT5G62840 ARR6 ATNDPK2 ATRMI1 GSA1 AT5G63700 ATERS ATGCH EMB3144 ANNAT2 ATLFNR1 AT5G66470 AT5G66520 ATDDM1 AT5G66770 ICU2 EPS1 AT5G67200 MATK
GO:0071840 cellular component organization or bioge...	BP	4.820e-51	ATGPAT4 ATCSLD5 LPA1 ATWEE1 POR ATBARD1 AT1G04040 SDG13 LIP2 AT1G04680 CTF18 AT1G04770 AT1G05140 emb2394 LPA19 UGT1 CCR2 ATPCNA1 ATLIG1 ABC1 BIP3 CRB AT1G09440 iPGAM1 ATRECQ4A SCM ATPMEPCRA AT1G11860 ATSRS ATNRT1 AT1G12500 AT1G12800 GAPA-2 LSMT-L AT1G14270 AT1G14345 ATWHY1 ATMAP70-4 ATECB2 CYCA2;3 CP24 NDF1 AT1G16080 HCF173 UP6 FUG1 AT1G18060 ATLP-1 ATNACK1 NDF6 LHCA2*1 JMT ATCLH1 ATLFNR2 DRT112 AT1G20950 AT1G21350 LYM1 AT1G23410 AT-EXP10 AT1G26880 AT1G28570 ATSCAR3 AT1G29700 RWA4 PRK AtLrgB ATPRR1 AT1G32470 ABCI7 AT1G32730 PRPL11 AtGXMT1 At-FANCM RPL21C AT1G36390 SKS6 AT1G41880 GAPB Aty2 AT1G44000 CP22 ATMCM2 AT1G44920 Lhca5 EMB3105 RACK1B AT1G49380 AtCXE5 POLGAMMA2 GDC1 HTA10 AT1G51110 4CL.1 AT1G52220 PSAH-2 AtPERK15 mMDH1 AtTLP18.3 AT1G54790 AT1G55260 ATNAS4 AT1G56500 SVB ATXYN1 ZCF125 CCB4 ABC4 ATFD2 ARP2 ACO2 ATSCO1 AT1G62780 AT1G63470 AT1G63610 ISPF REB1 AT1G64500 AT1G64510 CDI Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication). 4CL3 AT1G65230 AT1G66180 ATGSR2 AtMYB20 PMI2 RBCS1A AT1G67690 PSBY BBX14 CER6 PSRP3/1 FLN2 AT1G69420 AT-EXP1 PG2 AT1G70550 ATPIN3 AtRLP11 ANAC030 AT1G72270 AP40 LPA3 AT1G73110 ATPIN1 ENO1 NDH-O JAC1 AT1G75150 emb2184 AtGH9B7 LQY1 AT1G76450 TAPX LYM3 AT1G77750 EMB1047 CS17 AT1G80030 APG2 AT2G01210 ATPIN4 LCR68 ATEXP15 AtHsp90.5 FLA7 AT2G05920 MCM5 ARAC1 ATPRMT1A PLA2-BETA AT2G20450 ATEXPB1 PSB29 PDTPI ATSULA AtFBA1 AT2G21530 ATRNR1 CYP79B3 IAA8 CLF ATMES3 YCF37 AT2G24060 ATWRKY60 AtENODL14 AT2G25270 AT2G25830 OVA4 CYP711A1 AT2G26500 SCAB1 AGO4 AT2G27680 CH-CPN60A AT2G28620 ATEXP6 ANTR1 MAPKKK14 PBCP RPT2 AT2G30695 TCP10 FIONA ATCDT1A MRL7-L ARASP AT2G33180 DAL BUBR1 GALS1 ATRANGAP2 AT2G34450 HMR ATHB-14 EDA3 GDCH AT2G35410 SKL2 ATERF38 RPL24A AtXTH32 MAT3 ABCB1 ATSIG6 AT2G37100 ATEXP3 AT2G37660 ATCAX1 TBL34 ATRPL23A PnsL1 AT2G39670 RCA LHCB4.3 ETG1 ATEXP8 AT2G41050 MIZ1 NTRC AT2G42130 AT2G43560 FAB2 AT2G43945 AGP8 ABIL1 SPA1 PSAP ATCYP38 ATBCA1 AT3G01810 ATCOL2 AT3G02640 EMB2768 AtUGP1 SDG31 EMB3119 AT3G05470 RWA2 AT3G06680 TRX ATYLMG1-1 AT3G07670 PIP5K6 AT3G08600 AT3G08740 ATERDJ3A AT3G09050 AT3G09200 PTAC13 LCL5 IDH-VI OMR1 GYRB1 AT3G10310 PAL4 AT3G10610 GYRA CYC2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. AT3G11964 ACT11 PGK1 AT3G12930 AT3G13120 AT3G13180 Cpn60beta2 ATKRS-2 AT3G13510 PRPS20 AT3G15680 MFP1 AT3G16080 AT3G16370 HCF107 RFC3 RLK902 DAC EMB1270 AT3G18280 EMB1865 AT3G19030 ATPREP1 AT3G19370 QWRF1 AT3G20010 AT3G20150 AT3G20260 PSBTN ATTSO1 ATSR2 AT3G23090 FIB4 MED33A ATSAHH2 ATTOPII HCF101 PLSP1 AFH1 ATL5 ATPRX ORF02 GAPA CCB1 GHS1 AT3G27180 AT3G27200 EMB3123 KLCR2 ATEXP5 AT3G43610 LTPG2 ATHD2A RPL9 AtXTH31 MAR1 PTAC16 AT3G47070 PEX11B AT3G47650 EDD AT3G48200 AT3G48420 GSA2 AtSWEET11 ATBBC1 AT3G49220 DMS3 BAM2 OEC33 AT3G51140 AT3G51280 ATG4 AT3G52170 CP33 FTSZ2-2 AT3G52900 MIDD1 ACT3 ATGCP4 HCEF1 ATGR2 AT3G54750 PDE329 PPL1 ATTSC13 SBPASE AT3G56230 AT3G56290 AT3G56370 PPD6 PSRP5 PrfB3 GIS AT3G58140 PME35 GUN4 ATRAD21.2 AT3G60245 CDS5 ATHAM2 AT3G60750 ATPIP1 ARATH;BSAS3;1 AT3G61870 APG3 ATIPT3 CSP41A AtcpRRF EMB3126 AT3G66652 BRCA2(IV) ATHAM3 TROL GT72B1 MCM7 AT4G02530 AT4G02630 EMB3129 PETC EMB2369 ATPC1 APX4 ATPD AT4G11175 AT4G12600 AtENODL19 ATSAHH1 AtPRD1 AT4G14200 AT4G14360 AO1 PPD1 SPK1 ATOPT3 SVR7 AT-EXPR AT4G17390 AT4G17560 LIL3:1 CH-42 AG PAM68 PTAC14 GALS3 PSBQ sks4 AT4G22830 PGR5-LIKE CCS52A1 AESP 3xHMG-box2 ARC1 cpHsc70-1 AT4G24750 ATRBP31 ACP4 CHLM ATFIB2 AT4G26660 AR192 VTC2 AT4G27640 EMB1923 ATEXPB3 MRL7 PSB28 GrxC5 AT4G28740 emb2726 AT4G30020 AHA2 AT4G30800 ATCSLC05 AtENODL15 PGR3 PDE334 ATBT1 ATH1 ATCBL10 AtGLDP1 ATPME44 AT4G33400 ATHDA14 AT4G33760 SEP1 ATCAP1 AT4G34730 ASE2 MRL1 HCF244 AT4G35320 XCP1 MCA1 BGAL3 ROT3 AT4G37295 NDH-M pde191 AT4G38660 AtFBA2 AT4G39040 SAMC1 AT4G39630 LAC10 TBL3 AT5G01590 AT5G01790 ATOFP1 OHP AT5G02610 AT5G02870 ATFLA11 LAC11 ATCSLA09 54CP GYRB2 FD-GOGAT SIR ATNAS1 EMB2771 ATEGY2 2-Cys AT5G07020 SMC6A ATRPA70B AT5G08050 HEMC AGAL2 AT5G08400 AT5G08650 AtPPa6 PMDH2 AT5G09760 CESA5 AT5G10020 AT5G10390 KAC1 AT5G10605 AT5G10620 HY5 PPD5 AT5G11480 AtMYB3R4 ATTERC Encodes a protein with similarity to REN1, a Rho GTPase activating protein. DiT1 ATGSL12 ATCYP20-2 AT5G13140 EMB3136 AT5G13770 AT5G14610 ATDEF2 AT5G15050 AtENODL17 APG6 GAUT14 AT5G16130 AtMYB43 DHAR3 EMB2247 AT5G17160 ENH1 AtUGP2 ATOBGC PCB2 AGP25 EMB3013 ADG2 ATOEP80 AT5G19730 AT5G20700 ATCPN21 CRR42 AT5G22340 AT5G22440 emb1211 H2B CaS HCF136 AT5G23480 EFO2 ARC11 ATSIG5 LSU2 AT5G25590 AT5G26330 MK AT5G27560 BIP1 ARRPS1 AMOS1 ATGSL1 atylmg3 ASF1B RBCS3B AT5G38520 APE1 CRR7 OLI7 DEG8 EMB139 BIP ARC6 TZP NDH18 SDG18 MCM6 AtCEST GALS2 MCM3 AT5G46580 TET1 Encodes the mitochondrial ATP synthase subunit delta. GFA2 ADG1 AT5G48360 AT5G48740 LPA66 TED7 HCT ATPRMT4A OVA2 AT5G50110 CP31B AT5G50420 FSD2 AT5G51110 ATPGMP OVA6 AT5G52780 AT5G52950 AT5G52970 AT5G53070 TRY PDV1 ATPMEPCRF PTAC15 THE1 RPL24 ANK ATK3 AT5G55220 ATFTSZ1-1 GDPDL4 AT5G55520 ATEXP14 PFN3 APO2 NPL1 AT5G58160 NdhN AT5G58330 AT5G59600 AT5G59740 AT5G59850 HTA6 ATLAC17 AtFLA12 CLB4 AT5G60670 PDCB1 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AGD1 ANAC101 CDF1 ATRMI1 AT5G63700 ATERS EMB3144 AT5G65360 BAM1 ATLFNR1 AT5G66470 AT5G66740 ATDDM1 ICU2 AT5G67200
GO:0009668 plastid membrane organization	BP	6.164e-50	LPA1 POR ABC1 CRB ATSRS AT1G12800 LSMT-L AT1G16080 FUG1 AT1G18060 AT1G21350 AtLrgB ABCI7 PRPL11 RPL21C AT1G36390 Aty2 CP22 AT1G44920 Lhca5 AT1G49380 AT1G51110 AT1G56500 ATSCO1 AT1G62780 ISPF AT1G64510 AT1G65230 CER6 AT1G73110 emb2184 AT1G76450 TAPX AT1G80030 APG2 PSB29 ATSULA AtFBA1 YCF37 OVA4 AT2G27680 PBCP TCP10 DAL EDA3 AT2G35410 ATSIG6 NTRC AT2G42130 AT2G43560 PSAP ATCYP38 EMB2768 AT3G07670 AT3G09050 PTAC13 PGK1 AT3G13120 ATKRS-2 MFP1 HCF107 DAC EMB1270 EMB1865 HCF101 PLSP1 CCB1 PTAC16 AT3G47070 AT3G48420 OEC33 ATG4 CP33 HCEF1 PDE329 PPD6 AT3G61870 APG3 AtcpRRF EMB3126 TROL AT4G02530 EMB3129 EMB2369 ATPD AT4G11175 LIL3:1 PGR5-LIKE emb2726 PGR3 ATH1 ATHDA14 AT4G34730 MRL1 pde191 SAMC1 ATEGY2 2-Cys AT5G07020 AT5G08650 PPD5 ATTERC EMB3136 ATDEF2 DHAR3 EMB2247 ATOBGC ADG2 emb1211 HCF136 ARRPS1 AMOS1 atylmg3 DEG8 EMB139 NDH18 ADG1 OVA2 CP31B AT5G51110 OVA6 AT5G52970 AT5G55220 NPL1
GO:0010027 thylakoid membrane organization	BP	6.164e-50	LPA1 POR ABC1 CRB ATSRS AT1G12800 LSMT-L AT1G16080 FUG1 AT1G18060 AT1G21350 AtLrgB ABCI7 PRPL11 RPL21C AT1G36390 Aty2 CP22 AT1G44920 Lhca5 AT1G49380 AT1G51110 AT1G56500 ATSCO1 AT1G62780 ISPF AT1G64510 AT1G65230 CER6 AT1G73110 emb2184 AT1G76450 TAPX AT1G80030 APG2 PSB29 ATSULA AtFBA1 YCF37 OVA4 AT2G27680 PBCP TCP10 DAL EDA3 AT2G35410 ATSIG6 NTRC AT2G42130 AT2G43560 PSAP ATCYP38 EMB2768 AT3G07670 AT3G09050 PTAC13 PGK1 AT3G13120 ATKRS-2 MFP1 HCF107 DAC EMB1270 EMB1865 HCF101 PLSP1 CCB1 PTAC16 AT3G47070 AT3G48420 OEC33 ATG4 CP33 HCEF1 PDE329 PPD6 AT3G61870 APG3 AtcpRRF EMB3126 TROL AT4G02530 EMB3129 EMB2369 ATPD AT4G11175 LIL3:1 PGR5-LIKE emb2726 PGR3 ATH1 ATHDA14 AT4G34730 MRL1 pde191 SAMC1 ATEGY2 2-Cys AT5G07020 AT5G08650 PPD5 ATTERC EMB3136 ATDEF2 DHAR3 EMB2247 ATOBGC ADG2 emb1211 HCF136 ARRPS1 AMOS1 atylmg3 DEG8 EMB139 NDH18 ADG1 OVA2 CP31B AT5G51110 OVA6 AT5G52970 AT5G55220 NPL1
GO:0006520 cellular amino acid metabolic process	BP	1.005e-49	POR LIP2 UGT1 EMB2784 ADT6 AT1G09310 ADT1 ATGLX1 AT1G11860 ATSRS AT1G12800 LSMT-L AT1G15410 AT1G15710 CP24 ATSOT17 DRT112 AOR PSAK ATIMD3 AK-HSDH AT-IE PRK AT1G32470 ABCI7 AT1G33110 SHM7 GAPB ATCAO CP22 GATB bHLH115 AT1G51110 PSAH-2 ABA2 AtTLP18.3 AT1G55260 AGP21 AT1G55360 AT1G56190 ATATP-PRT1 AT1G60000 ACO2 FMO ISPF FMO ATGSR2 AT1G66430 PSBY AT1G68260 CER6 PHYLLO AT1G70280 AOAT2 LPA3 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PETE1 ACR3 AT1G77670 ATGSTU20 LCR68 ATMEPCT EMB2761 AT2G05920 ATHNIR AT2G17630 AAS PDTPI AtFBA1 CYP79B3 ATMES3 AT2G24060 AT2G24580 AT2G25830 OVA4 AtGLDP2 AT2G27680 ADT3 RPT2 AT2G30695 FIONA AT2G31670 AT2G33180 GDCH SKL2 ATPAL1 ADK AT2G37500 PnsL1 AT2G42220 ATLEUD1 FAB2 UGT74F1 AT2G44040 CHL-CPN10 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 ATCB5-C AtCGS1 AK3 EMB2768 ATMS2 GDH3 EMB3119 AT3G07270 ADK1 OMR1 PAL4 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 ATKRS-2 AT3G14390 HEME1 ECT6 MAT4 AT3G19030 AT3G19480 BCAT4 ATSAHH2 AT3G23940 ATPRX AT3G26450 ATCM1 AT3G44740 EDD GSA2 ATBCAT-3 AT3G51140 ATG4 FTSZ2-2 ATPAL2 AT3G54400 OVA1 ATDFD SBPASE AT3G56300 NAGK AT3G58140 IPMI1 GUN4 AT3G59890 MTHFR1 AT3G60750 ARATH;BSAS3;1 CYP20-3 AtcpRRF EMB3126 TROL EMB2369 APR ATPC1 ATMSRB5 ARGAH2 CYP83A1 SHM4 CYP74B2 IAGLU AtCLA1 ATNS1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G18460 AK-HSDH AT4G23670 ATRBP31 AT4G24830 FAD6 ATH1 AtGLDP1 AGD2 AT4G33760 EDA9 ATSERAT3;2 MCA1 SHM1 ROC1 AtFBA2 AT4G39040 ATIPS1 AKN2 ATPDX1 ATPAL3 SIR HEMC AtPPa6 PMDH2 AT5G10920 DiT1 ATCYP20-2 AT5G13140 CARAB-AK-LYS ATIMD1 AT-P5C1 EMB2247 PCB2 AGP25 AT5G19240 ATCPN21 AT5G21060 AT5G22340 EMB1030 IMS3 IMS2 CaS SHM2 ATGSL1 UPM1 AT5G41760 AT5G46580 TET1 PYL1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. OVA2 AT5G51110 OVA6 APO2 CLB4 ATMYB34 PDCB1 DXR GSA1 ATERS DCT ASN2
GO:0006996 organelle organization	BP	1.994e-49	ATCSLD5 LPA1 ATWEE1 POR ATBARD1 SDG13 CTF18 AT1G04770 emb2394 UGT1 CCR2 ATPCNA1 ATLIG1 ABC1 CRB ATRECQ4A AT1G11860 ATSRS AT1G12800 GAPA-2 LSMT-L ATWHY1 ATMAP70-4 ATECB2 CYCA2;3 CP24 AT1G16080 UP6 FUG1 AT1G18060 ATLP-1 ATNACK1 ATLFNR2 DRT112 AT1G20950 AT1G21350 LYM1 AT1G23410 ATSCAR3 PRK AtLrgB AT1G32470 ABCI7 AT1G32730 PRPL11 At-FANCM RPL21C AT1G36390 GAPB Aty2 AT1G44000 CP22 ATMCM2 AT1G44920 Lhca5 AT1G49380 POLGAMMA2 GDC1 HTA10 AT1G51110 AT1G52220 PSAH-2 mMDH1 AtTLP18.3 AT1G56500 ZCF125 ACO2 ATSCO1 AT1G62780 AT1G63470 ISPF AT1G64500 AT1G64510 Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication). AT1G65230 ATGSR2 PMI2 AT1G67690 PSBY CER6 PSRP3/1 FLN2 AT1G69420 ANAC030 AT1G72270 AP40 AT1G73110 JAC1 AT1G75150 emb2184 LQY1 AT1G76450 TAPX EMB1047 CS17 AT1G80030 APG2 AT2G01210 AtHsp90.5 MCM5 ARAC1 ATPRMT1A PSB29 PDTPI ATSULA AtFBA1 AT2G21530 ATRNR1 IAA8 CLF YCF37 AtENODL14 AT2G25270 OVA4 AT2G26500 SCAB1 AGO4 AT2G27680 CH-CPN60A AT2G28620 ATEXP6 MAPKKK14 PBCP RPT2 AT2G30695 TCP10 FIONA ATCDT1A MRL7-L ARASP DAL BUBR1 ATRANGAP2 AT2G34450 HMR ATHB-14 EDA3 GDCH AT2G35410 MAT3 ABCB1 ATSIG6 AT2G37100 ATCAX1 AT2G39670 ETG1 AT2G41050 MIZ1 NTRC AT2G42130 AT2G43560 FAB2 ABIL1 SPA1 PSAP ATCYP38 ATCOL2 AT3G02640 EMB2768 SDG31 AT3G05470 TRX ATYLMG1-1 AT3G07670 AT3G09050 PTAC13 LCL5 OMR1 GYRB1 AT3G10310 AT3G10610 GYRA CYC2 ACT11 PGK1 AT3G13120 AT3G13180 Cpn60beta2 ATKRS-2 AT3G13510 MFP1 HCF107 DAC EMB1270 EMB1865 ATPREP1 QWRF1 AT3G20010 AT3G20150 AT3G20260 PSBTN ATTSO1 FIB4 MED33A ATSAHH2 ATTOPII HCF101 PLSP1 AFH1 GAPA CCB1 EMB3123 AT3G43610 MAR1 PTAC16 AT3G47070 PEX11B AT3G47650 EDD AT3G48200 AT3G48420 AtSWEET11 DMS3 OEC33 AT3G51140 AT3G51280 ATG4 AT3G52170 CP33 FTSZ2-2 MIDD1 ACT3 ATGCP4 HCEF1 ATGR2 AT3G54750 PDE329 PPL1 ATTSC13 SBPASE AT3G56290 PPD6 PSRP5 PrfB3 AT3G58140 ATRAD21.2 ATHAM2 AT3G60750 ATPIP1 ARATH;BSAS3;1 AT3G61870 APG3 ATIPT3 CSP41A AtcpRRF EMB3126 AT3G66652 BRCA2(IV) TROL MCM7 AT4G02530 EMB3129 PETC EMB2369 ATPC1 ATPD AT4G11175 AtENODL19 ATSAHH1 AtPRD1 AT4G14200 SPK1 SVR7 AT4G17390 LIL3:1 PTAC14 PSBQ PGR5-LIKE AESP 3xHMG-box2 ARC1 cpHsc70-1 AT4G24750 ACP4 AT4G26660 AR192 AT4G27640 EMB1923 MRL7 AT4G28740 emb2726 AT4G30020 AT4G30800 AtENODL15 PGR3 PDE334 ATH1 AT4G33400 ATHDA14 AT4G33760 SEP1 ATCAP1 AT4G34730 ASE2 MRL1 MCA1 pde191 AtFBA2 SAMC1 AT4G39630 ATCSLA09 GYRB2 FD-GOGAT SIR EMB2771 ATEGY2 2-Cys AT5G07020 SMC6A ATRPA70B AT5G08050 AGAL2 AT5G08650 PMDH2 AT5G10020 AT5G10390 KAC1 HY5 PPD5 AT5G11480 AtMYB3R4 ATTERC Encodes a protein with similarity to REN1, a Rho GTPase activating protein. ATGSL12 EMB3136 AT5G13770 ATDEF2 AT5G15050 APG6 DHAR3 EMB2247 AT5G17160 ENH1 ATOBGC ADG2 ATOEP80 AT5G20700 ATCPN21 emb1211 H2B CaS HCF136 AT5G23480 EFO2 ARC11 ATSIG5 LSU2 AT5G25590 MK BIP1 ARRPS1 AMOS1 ATGSL1 atylmg3 ASF1B AT5G38520 DEG8 EMB139 BIP ARC6 TZP NDH18 SDG18 MCM6 AtCEST MCM3 Encodes the mitochondrial ATP synthase subunit delta. GFA2 ADG1 AT5G48360 LPA66 ATPRMT4A OVA2 CP31B AT5G50420 FSD2 AT5G51110 OVA6 AT5G52950 AT5G52970 PDV1 PTAC15 RPL24 ATK3 AT5G55220 ATFTSZ1-1 GDPDL4 AT5G55520 PFN3 NPL1 AT5G58160 AT5G58330 AT5G59600 AT5G59740 HTA6 CLB4 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AGD1 ANAC101 CDF1 ATRMI1 AT5G63700 ATERS EMB3144 AT5G65360 BAM1 ATLFNR1 AT5G66470 ATDDM1 ICU2 AT5G67200
GO:0019252 starch biosynthetic process	BP	2.337e-49	AtBE2 POR ATSS3 AT1G12800 LSMT-L NDF6 AT1G22630 Cpn60beta4 IMPL1 AK-HSDH CYP97A3 Aty2 CP22 AT1G49380 ABCD2 AT1G56190 AT1G56500 ATSCO1 AT1G62780 AT1G65230 AT1G68600 PGM2 AT1G73600 AT1G76450 AT1G77090 ATGSTU20 APG2 AtFBA1 AT2G21530 BASS2 AGO4 PY ATFC-II NHL12 AT2G36145 NTRC PHR2 PnsL3 LSF1 AT3G01660 ATF1 ATGSTF11 AtUGP1 ATSFR2 AT3G07670 AT3G09050 LSF2 PGK1 ESM1 MFP1 NDF4 EMB2083 DAC EMB1270 ABCI12 AT3G22210 HCF101 AT3G28760 AT3G48200 AT3G48420 FTSZ2-2 HCEF1 PDE329 SBPASE AT3G56010 AT3G59780 BAM2 EMB3129 ATPC1 APX4 ATPD AT4G10300 CYP83A1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G20760 ATRP1 PGR5-LIKE AT4G27700 AT4G30020 PGR3 AtGLDP1 ATHDA14 AT4G33500 AtFBA2 APL3 ATPDX1 AT5G02940 SBE2.2 AGAL2 PPD5 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. CaS ATSS1 AT5G27560 AT5G28500 atylmg3 APE1 CRR7 DEG8 ADG1 CP31B ATPGMP AtPLR1 AT5G55220 APO2 NPL1 NdhN AT5G58330 CLB4 DXR
GO:0006629 lipid metabolic process	BP	1.379e-48	AT1G01080 KCS1 ATGPAT4 ATGPAT2 AtD27 POR KCS2 AT1G04420 LIP2 KAT1 emb2394 AT1G06250 AT1G06360 AT1G06550 CCR2 EMB2784 KCS3 ABC1 CJD1 CRB AT1G09390 iPGAM1 Z-ISO AT1G10900 ATFD1 AT1G11860 ATNRT1 AT1G12800 AT1G13650 LSMT-L AT1G14270 AT1G14345 ATGA3OX1 NDF1 AT1G16080 UP6 FUG1 LHCA2*1 AT1G20950 ATPIP5K1 AOR GATL8 Cpn60beta4 AT1G27480 AT1G28570 AT1G28610 AT1G28660 ARAB-1 AT1G29660 IMPL1 CYP97A3 ACT1 FdC2 GBSS1 PRPL11 ATNR2 GAPB AT1G44920 ATTLL1 AT1G49380 LACS2 AtCXE5 AT1G49740 GDC1 Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols. ABA2 PLDALPHA2 AtTLP18.3 AT1G54790 AT1G55260 ZKT CPN60B AT1G56500 AT1G56670 AT1G57770 RXW8 ABC4 AT1G62780 ISPF BDG1 AT1G65230 AT1G66180 GDPDL1 AT1G68240 CER6 PSRP3/1 PHO1;H1 AtGDPD4 AT1G72430 EDA17 AT1G73110 AT1G73650 AT1G74070 emb2184 AtGH9B7 AT1G77090 LACS9 AT1G80030 ATMEPCT FLA7 KCS9 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 AT2G21860 ATIPS2 CYP79B3 YCF37 AT2G24060 HHP3 PYL2 CYP711A1 FDH NPC2 ATCDPMEK AT2G27360 AT2G27680 PY AtFAD3 ATFC-II AT2G30695 CVL1 AT2G32640 ATCB5-B PRPL28 CYP710A2 EDA3 AT2G35410 SKL2 DOGT1 ATSIG6 AT2G37660 ATCAX1 PGP1 GLY1 NTRC AT2G42130 ATPPC2 NPG1 AT2G43560 FAB2 AT2G44920 PHR2 AtSS2 ATCYP38 EMB2768 ATF1 VTC4 ATGSTF11 RGL2 NPC4 ATLTL1 EMB3119 AT3G05180 AT3G07670 PIP5K6 ATERDJ3A PTAC13 AtFAD7 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST PGK1 AT3G12930 AT3G13120 ESM1 AT3G14220 AT3G15520 ADS3 MFP1 NDF4 AT3G16370 AAE7 EMB1865 GLTP3 AT3G23510 AT3G23530 HCF101 AAPT2 AT3G25660 AT3G25805 ATPRX ORF02 CCB1 AAO2 LTPG2 RPL9 PTAC16 AT3G47650 AT3G48420 AT3G48460 AT3G50685 ATG4 PSRP2 CP33 ELL1 CYP97C1 HCEF1 AT3G54210 ATTSC13 SBPASE AT3G56010 UGP3 AT3G57010 AT3G58140 GUN4 AT3G59780 CDS5 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 APG3 AtcpRRF PLA APG1 EMB3126 ATT1 TROL ATGPAT3 AT4G02530 EMB3129 ATPC1 CLS APX4 ATPD ATSPS4F AT4G10300 AT4G13550 CYP83A1 PDE226 ATECI3 CYP97B3 CYP74B2 AtCLA1 SPK1 AT4G17560 LIL3:1 AT4G17740 CH-42 AT4G18970 PTAC14 ATRAB8D sks4 AtDIR6 AT4G24750 ACP4 CHLM B1 AT4G25870 FAD4 PSB28 AT4G28780 emb2726 FAD6 PGR3 ATSDX1 ATH1 AtGLDP1 SQD1 AT4G33110 ATHDA14 AT4G34090 SEP1 CLB6 SQS2 MRL1 HCF244 MCA1 ROT3 AtGGPPS11 MAP1D LBD39 SQE3 AtFBA2 AT4G39040 ATIPS1 SQD2 Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. SBE2.2 54CP FD-GOGAT SIR AtFAD8 ATEGY2 AT5G07020 ERL2 AtGDPD6 HEMC AGAL2 AT5G08650 PMDH2 ATMIPS3 AT5G10690 PPD5 DiT1 ATDEF2 AtENODL17 PSY AT5G17670 PCB2 AtHBP5 ATMGD2 ATCPN21 AT5G21100 CaS HCF136 SQE5 AT5G24155 ATSS1 MK ARRPS1 G6PD1 NDH18 KCS20 AT5G45280 ATFKBP13 CHL AT5G45950 AT5G45960 AT5G46220 LIL3:2 AMK2 ADG1 OVA2 CP31B AT5G51310 ATPGMP B2 AT5G52970 ATOMT1 AHL RPL24 AT5G55220 GDPDL4 AT5G56040 LUT2 CER3 NdhN AtcPT4 CLB4 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. DXR ATNDPK2 ANNAT2 AT5G66470 ABA1
GO:0044802 single-organism membrane organization	BP	1.692e-48	LPA1 POR ABC1 CRB ATSRS AT1G12800 LSMT-L AT1G16080 FUG1 AT1G18060 JMT ATCLH1 ATLFNR2 AT1G21350 AT1G28570 PRK AtLrgB ABCI7 PRPL11 RPL21C AT1G36390 Aty2 CP22 AT1G44920 Lhca5 AT1G49380 AT1G51110 4CL.1 AT1G56500 ATSCO1 AT1G62780 ISPF AT1G64510 AT1G65230 BBX14 CER6 AtRLP11 AT1G73110 emb2184 AT1G76450 TAPX AT1G80030 APG2 PSB29 ATSULA AtFBA1 ATMES3 YCF37 ATWRKY60 OVA4 CYP711A1 AT2G27680 ANTR1 PBCP TCP10 FIONA DAL EDA3 AT2G35410 ATSIG6 RCA NTRC AT2G42130 AT2G43560 PSAP ATCYP38 ATBCA1 EMB2768 EMB3119 AT3G07670 AT3G09050 PTAC13 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G13120 ATKRS-2 MFP1 HCF107 DAC EMB1270 AT3G18280 EMB1865 AT3G19030 AT3G19370 ATSR2 HCF101 PLSP1 CCB1 PTAC16 AT3G47070 AT3G48420 OEC33 ATG4 CP33 HCEF1 PDE329 SBPASE PPD6 AT3G61870 APG3 AtcpRRF EMB3126 TROL GT72B1 AT4G02530 EMB3129 PETC EMB2369 ATPD AT4G11175 LIL3:1 PGR5-LIKE emb2726 PGR3 PDE334 ATBT1 ATH1 ATHDA14 AT4G34730 MRL1 pde191 SAMC1 54CP ATEGY2 2-Cys AT5G07020 AT5G08650 AtPPa6 PMDH2 PPD5 ATTERC EMB3136 ATDEF2 DHAR3 EMB2247 ATOBGC ADG2 AT5G20700 emb1211 HCF136 ARRPS1 AMOS1 atylmg3 DEG8 EMB139 NDH18 GFA2 ADG1 HCT OVA2 CP31B AT5G51110 OVA6 AT5G52970 ATPMEPCRF ANK AT5G55220 NPL1 CLB4 ATLFNR1
GO:0005982 starch metabolic process	BP	2.740e-48	AtBE2 POR ATSS3 AT1G12800 LSMT-L NDF6 AT1G22630 Cpn60beta4 IMPL1 AK-HSDH CYP97A3 Aty2 CP22 AT1G49380 ABCD2 AT1G56190 AT1G56500 ATSCO1 AT1G62780 AT1G65230 AT1G68600 PG2 PGM2 AT1G73600 AtGH9B7 AT1G76450 AT1G77090 ATGSTU20 APG2 AtFBA1 AT2G21530 BASS2 AGO4 PY ATFC-II NHL12 AT2G36145 AT2G37660 NTRC PHR2 PnsL3 LSF1 AT3G01660 AT3G01810 ATF1 ATGSTF11 AtUGP1 ATSFR2 AT3G07670 AT3G09050 LSF2 PGK1 ESM1 MFP1 NDF4 EMB2083 DAC EMB1270 ABCI12 AT3G22210 HCF101 AT3G28760 AT3G48200 AT3G48420 FTSZ2-2 HCEF1 PDE329 SBPASE AT3G56010 AT3G56370 AT3G59780 BAM2 EMB3129 ATPC1 APX4 ATPD AT4G10300 CYP83A1 AtBAM3 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G20760 ATRP1 PGR5-LIKE AT4G27700 AT4G30020 PGR3 AtGLDP1 ATHDA14 AT4G33500 CAT2 AtFBA2 APL3 ATPDX1 AT5G01590 AT5G02940 SBE2.2 AGAL2 PPD5 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. CaS ATSS1 AT5G27560 AT5G28500 atylmg3 APE1 CRR7 DEG8 ADG1 CP31B ATPGMP AtPLR1 AT5G55220 GDPDL4 APO2 NPL1 NdhN AT5G58330 CLB4 DXR
GO:0044255 cellular lipid metabolic process	BP	7.973e-48	AT1G01080 KCS1 ATGPAT4 ATGPAT2 AtD27 POR KCS2 AT1G04420 LIP2 KAT1 emb2394 AT1G06550 CCR2 EMB2784 KCS3 ABC1 CJD1 CRB Z-ISO AT1G10900 ATFD1 AT1G11860 AT1G12800 AT1G13650 LSMT-L AT1G14270 AT1G14345 ATGA3OX1 NDF1 AT1G16080 UP6 FUG1 LHCA2*1 ATPIP5K1 AOR Cpn60beta4 IMPL1 CYP97A3 ACT1 FdC2 GBSS1 PRPL11 ATNR2 GAPB AT1G44920 AT1G49380 LACS2 GDC1 ABA2 PLDALPHA2 AtTLP18.3 AT1G55260 ZKT CPN60B AT1G56500 AT1G57770 ABC4 AT1G62780 ISPF BDG1 AT1G65230 AT1G68240 CER6 PSRP3/1 PHO1;H1 EDA17 AT1G73110 AT1G74070 emb2184 AT1G77090 LACS9 AT1G80030 ATMEPCT KCS9 PSB29 PDTPI ATSULA AtFBA1 AT2G21385 ATIPS2 CYP79B3 YCF37 AT2G24060 PYL2 CYP711A1 FDH NPC2 ATCDPMEK AT2G27680 PY AtFAD3 ATFC-II AT2G30695 CVL1 AT2G32640 ATCB5-B PRPL28 CYP710A2 EDA3 AT2G35410 SKL2 ATSIG6 AT2G37660 ATCAX1 PGP1 GLY1 NTRC AT2G42130 ATPPC2 AT2G43560 FAB2 AT2G44920 PHR2 AtSS2 ATCYP38 EMB2768 ATF1 VTC4 ATGSTF11 RGL2 NPC4 EMB3119 AT3G07670 PIP5K6 ATERDJ3A PTAC13 AtFAD7 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ATHST PGK1 AT3G12930 AT3G13120 ESM1 AT3G15520 ADS3 MFP1 NDF4 AT3G16370 AAE7 EMB1865 GLTP3 HCF101 AAPT2 AT3G25660 AT3G25805 ATPRX ORF02 CCB1 AAO2 LTPG2 RPL9 PTAC16 AT3G47650 AT3G48420 AT3G50685 ATG4 PSRP2 CP33 ELL1 CYP97C1 HCEF1 AT3G54210 ATTSC13 SBPASE AT3G56010 UGP3 AT3G58140 GUN4 AT3G59780 CDS5 AT3G60750 ARATH;BSAS3;1 AT3G61870 CYP20-3 APG3 AtcpRRF APG1 EMB3126 ATT1 TROL ATGPAT3 AT4G02530 EMB3129 ATPC1 CLS APX4 ATPD ATSPS4F AT4G10300 CYP83A1 PDE226 ATECI3 CYP97B3 CYP74B2 AtCLA1 AT4G17560 LIL3:1 AT4G17740 CH-42 PTAC14 ATRAB8D AT4G24750 ACP4 CHLM B1 FAD4 PSB28 emb2726 FAD6 PGR3 ATSDX1 ATH1 AtGLDP1 SQD1 ATHDA14 AT4G34090 SEP1 CLB6 MRL1 HCF244 MCA1 AtGGPPS11 MAP1D SQE3 AtFBA2 AT4G39040 ATIPS1 SQD2 SBE2.2 54CP FD-GOGAT AtFAD8 ATEGY2 AT5G07020 ERL2 HEMC AGAL2 AT5G08650 PMDH2 ATMIPS3 AT5G10690 PPD5 ATDEF2 PSY AT5G17670 PCB2 AtHBP5 ATMGD2 ATCPN21 AT5G21100 CaS HCF136 SQE5 ATSS1 MK ARRPS1 G6PD1 NDH18 KCS20 ATFKBP13 CHL AT5G45950 AT5G46220 LIL3:2 AMK2 ADG1 OVA2 CP31B AT5G51310 ATPGMP B2 AT5G52970 AHL RPL24 AT5G55220 LUT2 CER3 NdhN AtcPT4 CLB4 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. DXR ATNDPK2 AT5G66470 ABA1
GO:0009628 response to abiotic stimulus	BP	3.704e-47	LHY KCS1 ASG4 ATGPAT4 CER1 ATCSLD5 POR AT1G04040 KCS2 AT1G04680 ATPDI10 BT3 AT1G06550 ATNDI1 KCS3 ATVAM2 ADT6 ABC1 BIP3 CRB iPGAM1 ATGSTU17 ATRECQ4A ATFD1 ADT1 ATGLX1 ATNRT1 PHR1 CYP71B2 ATECB2 ATGA3OX1 CP24 AT1G15930 ATOCT3 ACR11 ABCG11 LHCA2*1 JMT ATLFNR2 DRT112 AT1G20870 AOR ABCB13 AT1G29660 AB165 AT1G30440 UGT78D1 ATIMD3 PRK AT1G32220 GBSS1 OHP2 RPL21C ATNR2 GAPB Aty2 CP22 mtLPD1 AT1G49010 ATHX GDC1 ABCG12 4CL.1 ABA2 SPA4 mMDH1 TTL1 AT1G54050 AtTLP18.3 CPN60B AT1G56500 AtMYB50 AtHEMA1 ATFD2 ACO2 MDAR6 ISPF AT1G64150 BDG1 RPOD1 4CL3 AT1G66180 ATGSR2 PMI2 RBCS1A CSK CER6 AT-EXP1 ATHVA22C AT1G70000 PG2 PGM2 ATPIN3 AtRLP11 AT1G72270 AP40 APC13 ATPIN1 AT1G73650 BBX16 JAC1 AtGH9B7 ATCDSP32 AT1G76450 TAPX GNR1 ATGSTU20 AtOCT5 AT1G80030 AT1G80530 ATPIN4 AHK4 LCR68 ATMEPCT ARPN AtHsp90.5 ZIP7 LHCB2 PGR5 KCS9 PLA2-BETA PDTPI AtFBA1 ATRL2 SEP2 ATIPS2 CLF ATMES3 AT2G25530 FDH ATCDPMEK AT2G27710 ADT3 ATEXP6 ANTR1 AtFAD3 PBCP RPT2 BBX25 ATGLR3.7 ATPDI9 ATCOP1 ATHB-14 NF-YA4 GDCH MAT3 ABCB1 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. AS1 ATEXP3 AT2G37660 AKR4C9 LCD1 AtHBP2 ATCAX1 AT2G38380 ANNAT4 ANN3 ATRPL23A RCA LHCB4.3 ATCAMBP25 AT2G41090 AT2G41250 FAB2 AT2G44920 SPA1 AtCCA1 ABCC4 AtENODL16 AtSS2 ATCYP38 ATBCA1 VTC4 AT3G02910 AtUGP1 RGL2 AT3G03770 ATMS2 ATLTL1 EMB3119 ATSFR2 LTP6 ATERDJ3A AT3G09200 LCL5 AT3G10060 AtFAD7 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. AT3G12320 DRT100 PGK1 AT3G13510 ESM1 ADS3 AT3G16370 MAT4 CIPK1 HYH AT3G17830 ATCAD4 BCAT4 AtBBX32 4CL2 UGT84A2 BBX31 ATWNK2 ATTSO1 ELIP ATSR2 bHLH34 ATSAHH2 AT3G24190 AFH1 AT3G26450 AT3G26490 GAPA ABCB15 ATGSTU27 AT3G44450 FLA4 PTAC16 AT3G47070 AtSWEET11 BAM2 OEC33 AT3G52360 AT3G52740 ATPAL2 HCEF1 ATTSC13 SBPASE AT3G57020 AT3G60750 SDR1 ATPIP1 ARATH;BSAS3;1 CYP20-3 CP12 CSP41A AT3G66652 BRCA2(IV) PIP1;4 AHDP TROL GT72B1 AT4G02530 PETC FIB APX4 ATNDK1 ATPD ATSPS4F ATOSM34 AtENODL19 CYP83A1 ATSAHH1 The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. ATECI3 AT4G15430 AtCLA1 AtSWEET17 ATOPT3 AT4G16980 AtBAM3 LIL3:1 PSBQ AT4G21870 sks4 PGR5-LIKE AESP AT4G23670 cpHsc70-1 TAR2 ATRBP31 ACP4 ABCB2 AtFBA7 AR192 VTC2 FAD4 AT4G29520 AT4G30400 FAD6 ATGPX7 PDE334 Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development. ATSDX1 ATH1 ATCBL10 AT4G33400 AT4G33500 AT4G33560 SEP1 ALDH3 ATCAP1 CAT2 HCF244 ATGLR3.2 MCA1 GATA7 ALDH3F1 ATHMA1 SQE3 SHM1 ATMYB4 ROC1 AT4G38840 BBX19 AT4G39960 ATPDX1 OHP ABCI20 AtHsp70-2 AT-HSC70-1 LCL1 AtNCS1 ATCSLA09 FD-GOGAT SIR AtCHIL AtFAD8 2-Cys ABCG22 ATMSRA2 SMC6A ATMYB29 ATRPA70B AT5G08050 HEMC ATFLS1 AT5G08650 NDC1 AT5G09240 AtPPa6 PMDH2 DOT3 HY5 OCP3 ATMSL10 DiT1 AT5G13140 ATCHS ATIMD1 AT-P5C1 APG6 AtbZIP3 ATCOL1 UGT78D2 ENH1 RVE1 AtUGP2 ATOBGC ADG2 AT5G19730 HHP1 ATGER3 AT5G20700 ATCPN21 IMS3 CaS HCF136 EFO2 ATSIG5 ATSS1 CRY3 ATRD22 BIP1 AMOS1 ATGSL1 G6PD1 CIR1 CML24 RBCS3B RBCS2B RBCS1B OLI7 BIP KCS20 ABCI21 AtCEST AT5G44680 Encodes the mitochondrial ATP synthase subunit delta. ADG1 AT5G48500 ATPRMT4A ATCP1 ATFRO6 cpHsc70-2 CP31B FSD2 ATPGMP ATPMEPCRF CRLK1 ATFTSZ1-1 AtHsp90.2 APO2 NPL1 DDB2 LTP4 LTP3 WOX2 ULI3 CLB4 EMB2728 ATCNX1 AGL42 DXR ATNDPK2 GSA1 ASN2 ANNAT2 BAM1 XTH6 ATLFNR1 ABA1 AT5G67385
GO:0061024 membrane organization	BP	4.500e-47	LPA1 POR ABC1 CRB ATSRS AT1G12800 LSMT-L AT1G16080 FUG1 AT1G18060 JMT ATCLH1 ATLFNR2 AT1G21350 AT1G28570 PRK AtLrgB ABCI7 PRPL11 RPL21C AT1G36390 Aty2 CP22 AT1G44920 Lhca5 AT1G49380 AT1G51110 4CL.1 AT1G56500 ATSCO1 AT1G62780 ISPF AT1G64510 AT1G65230 BBX14 CER6 AtRLP11 AT1G73110 emb2184 AT1G76450 TAPX AT1G80030 APG2 PSB29 ATSULA AtFBA1 ATMES3 YCF37 ATWRKY60 OVA4 CYP711A1 AT2G27680 ANTR1 PBCP TCP10 FIONA DAL EDA3 AT2G35410 ATSIG6 RCA NTRC AT2G42130 AT2G43560 PSAP ATCYP38 ATBCA1 EMB2768 EMB3119 AT3G07670 AT3G09050 PTAC13 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G13120 ATKRS-2 MFP1 HCF107 DAC EMB1270 AT3G18280 EMB1865 AT3G19030 AT3G19370 ATSR2 HCF101 PLSP1 CCB1 PTAC16 AT3G47070 AT3G48420 OEC33 ATG4 CP33 HCEF1 PDE329 SBPASE PPD6 AT3G61870 APG3 AtcpRRF EMB3126 TROL GT72B1 AT4G02530 EMB3129 PETC EMB2369 ATPD AT4G11175 LIL3:1 PGR5-LIKE emb2726 PGR3 PDE334 ATBT1 ATH1 ATHDA14 AT4G34730 MRL1 pde191 SAMC1 54CP ATEGY2 2-Cys AT5G07020 AT5G08650 AtPPa6 PMDH2 PPD5 ATTERC EMB3136 ATDEF2 DHAR3 EMB2247 ATOBGC ADG2 AT5G20700 emb1211 HCF136 ARRPS1 AMOS1 atylmg3 DEG8 EMB139 NDH18 GFA2 ADG1 HCT OVA2 CP31B AT5G51110 OVA6 AT5G52970 ATPMEPCRF ANK AT5G55220 NPL1 CLB4 ATLFNR1
GO:0044085 cellular component biogenesis	BP	9.586e-47	ATCSLD5 LPA1 ATWEE1 POR AT1G04040 LIP2 AT1G04680 AT1G05140 emb2394 LPA19 UGT1 ABC1 CRB AT1G09440 ATSRS AT1G12500 GAPA-2 LSMT-L AT1G14270 AT1G14345 CYCA2;3 NDF1 HCF173 NDF6 LHCA2*1 ATLFNR2 AT1G26880 ATSCAR3 AT1G29700 RWA4 PRK ATPRR1 AT1G32470 ABCI7 PRPL11 AtGXMT1 RPL21C AT1G36390 SKS6 AT1G41880 GAPB CP22 Lhca5 EMB3105 RACK1B AT1G49380 AtCXE5 GDC1 HTA10 AT1G52220 PSAH-2 AtTLP18.3 AT1G54790 AT1G55260 SVB ATXYN1 ZCF125 CCB4 ABC4 ATFD2 ATSCO1 AT1G63470 AT1G63610 ISPF REB1 AT1G64500 AT1G64510 Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication). 4CL3 AtMYB20 RBCS1A AT1G67690 PSBY CER6 FLN2 AT1G69420 PG2 AT1G70550 ANAC030 AP40 LPA3 NDH-O emb2184 AtGH9B7 LQY1 AT1G76450 AT1G77750 APG2 FLA7 AT2G05920 AT2G20450 PSB29 AtFBA1 AT2G21530 IAA8 AT2G24060 AT2G25270 AT2G25830 OVA4 AT2G26500 AGO4 CH-CPN60A ATEXP6 PBCP AT2G30695 TCP10 ARASP AT2G33180 DAL GALS1 ATRANGAP2 ATHB-14 GDCH AT2G35410 SKL2 ATERF38 RPL24A AtXTH32 ABCB1 AT2G37660 TBL34 ATRPL23A PnsL1 AT2G39670 LHCB4.3 AT2G43560 AT2G43945 AGP8 ABIL1 PSAP ATCYP38 EMB2768 RWA2 AT3G06680 TRX AT3G08600 AT3G08740 AT3G09200 IDH-VI PAL4 AT3G10610 CYC2 AT3G11964 AT3G12930 AT3G13120 AT3G13180 ATKRS-2 PRPS20 AT3G16080 AT3G16370 HCF107 RFC3 DAC EMB1270 AT3G20010 AT3G20260 PSBTN ATTSO1 AT3G23090 MED33A ATTOPII HCF101 PLSP1 AFH1 ATL5 ATPRX GAPA CCB1 GHS1 AT3G27180 AT3G27200 AT3G43610 LTPG2 ATHD2A RPL9 AtXTH31 PTAC16 AT3G47070 AT3G47650 GSA2 ATBBC1 BAM2 OEC33 AT3G51140 ATG4 CP33 FTSZ2-2 AT3G52900 ATGCP4 HCEF1 PPL1 SBPASE AT3G56230 AT3G56370 PrfB3 GUN4 ATRAD21.2 AT3G60245 CDS5 ATHAM2 AT3G60750 AT3G61870 CSP41A AtcpRRF EMB3126 TROL AT4G02530 AT4G02630 PETC EMB2369 ATPC1 APX4 ATPD AT4G12600 AtENODL19 ATSAHH1 AtPRD1 AT4G14360 AO1 PPD1 SPK1 AT4G17560 LIL3:1 CH-42 PAM68 PTAC14 GALS3 PSBQ AT4G22830 PGR5-LIKE CCS52A1 AESP ARC1 AT4G24750 ATRBP31 ACP4 CHLM ATFIB2 AT4G27640 EMB1923 PSB28 GrxC5 AT4G30020 ATCSLC05 AtENODL15 PDE334 ATH1 AT4G33760 SEP1 AT4G34730 HCF244 AT4G35320 XCP1 MCA1 BGAL3 NDH-M pde191 AtFBA2 AT4G39040 SAMC1 LAC10 TBL3 AT5G01790 OHP AT5G02610 ATFLA11 LAC11 ATCSLA09 54CP EMB2771 ATEGY2 HEMC AGAL2 AT5G08400 AT5G08650 PMDH2 CESA5 AT5G10020 AT5G10390 KAC1 AT5G10605 AT5G10620 AT5G11480 AtMYB3R4 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. DiT1 ATCYP20-2 EMB3136 AT5G15050 GAUT14 AT5G16130 AtMYB43 EMB2247 ENH1 ATOBGC PCB2 AGP25 EMB3013 ADG2 ATOEP80 CRR42 AT5G22340 AT5G22440 emb1211 H2B CaS HCF136 ARC11 ATSIG5 AT5G26330 AT5G27560 ARRPS1 AMOS1 atylmg3 RBCS3B AT5G38520 APE1 CRR7 OLI7 ARC6 AtCEST GALS2 AT5G46580 Encodes the mitochondrial ATP synthase subunit delta. ADG1 AT5G48740 LPA66 TED7 OVA2 AT5G50110 AT5G50420 FSD2 AT5G51110 OVA6 AT5G52780 AT5G52970 AT5G53070 ATFTSZ1-1 GDPDL4 AT5G55520 PFN3 APO2 NPL1 NdhN AT5G58330 HTA6 ATLAC17 AtFLA12 AT5G60670 ANAC101 EMB3144 AT5G65360 BAM1 ATLFNR1 AT5G66470 ICU2
GO:0006725 cellular aromatic compound metabolic pro...	BP	1.833e-46	LHY KCS1 ASG4 ATCSLD5 ATWEE1 POR ATBARD1 KCS2 AXR3 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase BDL LIP2 KAT1 CTF18 emb2394 LPA19 UGT1 BT3 ATNTH2 ATPCNA1 ATLIG1 ADT6 ABC1 emb2411 CRB similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase ATGSTU18 AT1G10585 ATRECQ4A ATFD1 CRR22 ADT1 ATSRS AT1G12244 PHR1 AT1G12800 GAPA-2 AT1G13730 LSMT-L PnsL2 AT1G14345 AtMYB124 ATWHY1 AT1G14460 AT1G14600 ATECB2 CYCA2;3 AT1G15710 AT1G15970 NDF1 AT1G16080 FUG1 GLYR2 AT1G18060 AT1G18090 AT1G18440 AT1G18485 AT1G18540 ATSOT17 NDF6 LHCA2*1 BES1 AT1G19490 ATCLH1 ATLFNR2 DRT112 AT1G20950 ATOGG1 AGL87 AT1G22630 AT1G23410 AOR MLP423 G6PD3 ATSOFL1 Cpn60beta4 AT1G26790 AT1G26880 AtHB23 ATHB54 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. SPL11 AT1G27480 AT1G28395 AT1G28530 SRD2 GlcNAc1pUT1 CYP97A3 AT-IE AT1G31920 STRS1 PRK ATPRR1 ACT1 NRT1.5 AT1G32470 ABCI7 FdC2 PRPL11 AtGXMT1 At-FANCM AT1G35560 RPL21C AT1G36280 GAPB ATCAO CP22 ATMCM2 Lhca5 DYW1 GATB RACK1B AT1G49010 AT1G49380 FTSH1 POLGAMMA2 GDC1 bHLH115 AT1G51080 AT1G51110 4CL.1 AT1G52220 PSAH-2 AT1G52510 SPA4 ATMUM4 AT1G54500 AtTLP18.3 AT1G55140 AT1G55210 NDF5 HAC04 AT1G56050 AT1G56500 AtMYB50 ATATP-PRT1 AT1G58170 AtHEMA1 ZCF125 CRR28 EMB3108 AT1G60590 ABC4 ARP2 AT1G62250 ACO2 FMO ATSCO1 AT1G62780 AT1G63470 ISPF AT1G64680 NDF2 RPOD1 AT1G64880 4CL3 AT1G65070 AT1G65230 AT1G65870 ATGSR2 AtMYB20 pde194 AT1G67690 PSBY CSK AT1G68440 BBX14 CER6 PHO1;H1 STN7 FLN2 AT1G70000 AT1G70280 ABCB26 CRR23 AT1G71480 ANAC030 AT1G72270 AP40 LPA3 ATPIN1 BBX16 AT1G74070 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G75090 AT1G75150 emb2184 LQY1 AT1G76450 AT1G77090 AT1G77750 AT1G78010 ATGSTU20 AT1G78995 AT1G79150 AT1G80850 APG2 AT2G01210 RPI2 ATMEPCT ATWHY3 OTP85 AT2G04790 EMB2761 AT2G05920 MCM5 AT2G13440 AT2G14285 BLH7 AT2G17972 AAS AT2G20450 MEF21 PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 AT2G21530 ATRL2 ATRNR1 AT2G21960 ATIPS2 CYP79B3 IAA8 CLF NAPRT2 ATMES7 ACL YCF37 eIFiso4G2 AT2G24060 PRPL35 PDE319 AT2G24350 AT2G24580 ATWRKY60 ESE2 AT2G25830 OVA4 CYP711A1 AT2G26500 ATCDPMEK AGO4 AT2G27680 AT2G27710 ADT3 ARF10 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 UXS6 AT2G29180 AT2G29360 PY ANTR1 MAPKKK14 PBCP AT2G30320 ATFC-II TCL2 AT2G30695 TCP10 FIONA ATERF15 ATCDT1A BBX25 AT2G31670 MRL7-L AT2G32060 ATOFP16 PRORP1 ATCOP1 AT2G33180 DAL BUBR1 HMR ATHB-14 NF-YA4 EDA3 GDCH AT2G35410 SKL2 ATERF38 AT2G35760 AT2G36145 RPL24A MAT3 ATSIG6 ATPAL1 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ADK AT2G37500 AS1 AT2G37660 PDX1L4 AT2G39240 SNZ ATRPL23A PnsL1 AT2G39670 RCA LHCB4.3 AT2G40200 AT2G40400 HEME2 ETG1 ARR16 ATCAMBP25 ARR8 NTRC ATLEUD1 AT2G43560 FAB2 UGT74F1 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis AT2G46250 SPA1 ATCB5-C PSAP AtCCA1 PHR2 ATCYP38 ATBCA1 AT3G01660 EMB2768 ATF1 AT3G02820 ATGSTF11 EMB3119 AT3G04840 ATRAD9 AT3G05560 RPL18 TRX AT3G07110 AT3G07270 ATYLMG1-1 AT3G07670 AT3G09050 AT3G09200 PTAC13 AT3G09580 LCL5 ADK1 GYRB1 AT3G10310 PAL4 AT3G10610 GYRA AT3G10760 AT3G10840 AT3G11510 CYC2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. AT3G11964 PGK1 AT3G12930 AT3G13000 AT3G13120 AT3G13180 ATKRS-2 AT3G13510 AGP12 ESM1 AT3G14330 HEME1 PRPS20 AT3G15460 AT3G15520 ADS3 MFP1 AT3G16080 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. HCF107 ECT6 MAT4 HYH DAC WOX1 RACK1C EMB1865 ATUNG AtTic62 AT3G19030 ATCAD4 BCAT4 AT3G20010 AT3G20150 PSBTN ATPURC AtBBX32 GluTRBP 4CL2 UGT84A2 BBX31 AT3G22150 AT3G22210 ATTSO1 ELIP bHLH34 MED33A ATTOPII AT3G23940 HCF101 PLSP1 ATL5 CRF11 RPL15 ATPRX GAPA CCB1 DRB3 ATTSO2 AT3G27180 AT3G27640 EMB3123 DEG1 ATCM1 CHR38 anac061 AT3G44590 AT3G44740 ATHD2A ATMYB48 PTAC16 DUT1 AT3G47070 PEX11B AT3G47650 AT3G47830 EDD AT3G48200 AT3G48420 AT3G48425 AT3G48440 DCF GSA2 AT3G48830 ATBBC1 DMS3 AT3G49640 ICK2 OEC33 AT3G51140 AT3G51280 ATG4 AT3G51950 FTSZ2-2 CYP97C1 ATPAL2 AT3G53680 PYRR HCEF1 AT3G54390 AT3G54750 PPL1 OVA1 ATDFD SBPASE AT3G56010 AT3G56290 AT3G56300 AT3G56680 BHLH038 BHLH039 ARR9 BPG2 PrfB3 ADSS GIS AT3G58140 GUN4 ATRAD21.2 AT3G59780 ATHAM2 AT3G61080 ARATH;BSAS3;1 AT3G61870 AT3G61950 CYP20-3 APG3 ATIPT3 CSP41A AtcpRRF OTP86 EMB3126 AT3G63510 AT3G66652 BRCA2(IV) UNE10 ATHAM3 ANTR2 AT4G00895 MEE47 TROL GT72B1 HEMG1 MCM7 AT4G02530 EMB3129 AT4G03090 PETC EMB2369 APR ATPC1 ARGAH2 APX4 ATNDK1 ATPD AT4G10450 AT4G10600 NDPK3 AT4G11100 AT4G11175 AT4G12600 AT4G12830 EPFL9 CYP83A1 ATSAHH1 AtPRD1 AT4G14200 NF-YB3 AT4G15000 AT4G15430 CYP74B2 IAGLU AtCLA1 AT4G15640 AT4G16141 SVR7 ATNS1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 AT4G17560 LIL3:1 MYC4 DEG5 AT4G18440 CH-42 AT4G18810 AG CMT2 PAM68 CYCT1;2 AK-HSDH PTAC14 PSBQ AT4G21770 APT3 PGR5-LIKE CCS52A1 AESP AtDIR6 AT4G24090 AT4G24350 TAR2 AT4G24750 ATRBP31 AT4G24790 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) AT4G24830 ACP4 CHLM SKS1 AT4G25290 ATFIB2 AtFBA7 AT4G26660 AR192 AT4G27700 EMB1923 MRL7 AT4G28740 AT4G28780 emb2726 ATHMA2 AHA2 AT4G30470 AT4G30800 AT4G30825 FAD6 LRL2 ACDO1 PGR3 PDE334 ATBT1 Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development. ATSDX1 ATH1 AtGLDP1 AT4G33400 ATHDA14 AtHMAC6 AT4G33760 AT4G34090 SEP1 BLH6 AT4G34730 ASE2 MRL1 HCF244 AT4G35270 GATA7 BGAL3 ATRL3 AT4G36640 ATHMA1 SHM1 pde191 ATMYB4 BBX19 AtFBA2 AT4G39040 ATCAD9 SAMC1 AT4G39630 AKN2 LAC8 LAC10 SQD2 ATPDX1 ATOFP1 AtHsp70-2 LCL1 AT5G02870 LAC11 ADK2 AtNCS1 SBE2.2 PTL 54CP GYRB2 FD-GOGAT ATPAL3 SIR AT5G04840 EMB2771 AT5G05790 UGT76C2 2-Cys AT5G06770 AT5G07020 AT5G07090 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. SMC6A ATMYB29 ATRPA70B AT5G08050 HEMC PDE340 AT5G08650 AT5G09240 AtPPa6 PMDH2 AT5G10605 AT5G10620 AT5G10690 AT5G10920 APT5 HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 TINY2 ATTERC ATGSL12 ABAP1 EMB3136 ABAR SVR3 ATCHS AO AtbZIP3 ATCOL1 AT5G16130 AtMYB43 EMB2247 ENH1 PSY RVE1 AT5G17660 ATOBGC PCB2 ADG2 AT5G19240 ATMGD2 CRR42 ATCKX5 AT5G22340 anac090 AT5G22440 EMB1030 IMS3 IMS2 CaS HCF136 AT5G23480 ATSIG5 PGL5 LSU2 AT5G24760 CRY3 ESE3 AT5G25590 tny AT5G27390 AT5G28500 ARRPS1 AT5G35170 ATGSL1 G6PD1 AT5G35970 atylmg3 ARF8 CIR1 ASF1B AT5G38520 CRR7 CDF2 OLI7 AT5G40060 UPM1 DRB5 AT5G41760 AT5G42070 ATS CYCA3;1 AT5G43150 NF-YC13 TZP SDG18 AT5G44520 MCM6 AT5G44680 ATFKBP13 AT5G45720 CHL MCM3 AT5G46390 AT5G46580 bHLH071 PYL1 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT5G47620 NF-YB2 AMK2 AT5G47970 ADG1 AT5G48360 HINT3 LPA66 HCT OVA2 ATMYB111 MMT AT5G50110 CP31B FSD2 AT5G51110 At-NEET ATPGMP AT5G52010 OVA6 AT5G52780 AT5G52950 AT5G52970 TRY AtPLR1 ATOMT1 PTAC15 ANK AT5G55220 ATFTSZ1-1 CRR21 AT5G56840 AT5G56850 APO2 NPL1 NdhN AT5G58330 DDB2 AT5G59600 AT5G59740 AtRIBA3 AT5G59850 ATLAC17 AT5G60130 CLB4 ATMYB34 ATRPA70D AtMYB28 AGL42 ANAC101 CDF1 AHA11 DXR AT5G62840 ARR6 ATNDPK2 ATRMI1 GSA1 AT5G63700 ATERS EMB3144 ATLFNR1 AT5G66470 AT5G66520 ATDDM1 AT5G66770 ICU2 EPS1 AT5G67200 MATK
GO:0055086 nucleobase-containing small molecule met...	BP	5.818e-46	POR LIP2 emb2394 LPA19 ATPCNA1 ABC1 CRB ATGSTU18 ATFD1 AT1G12800 AT1G13730 PnsL2 AT1G14345 NDF1 AT1G16080 GLYR2 AT1G18060 NDF6 LHCA2*1 ATLFNR2 DRT112 AT1G22630 AT1G23410 AOR G6PD3 AT1G28395 AT1G28530 GlcNAc1pUT1 AT-IE PRK AT1G32470 FdC2 AT1G36280 GAPB ATMCM2 RACK1B FTSH1 GDC1 AT1G51110 ATMUM4 EMB3108 ARP2 ATSCO1 AT1G62780 ISPF NDF2 AT1G64880 AT1G65230 pde194 CER6 FLN2 CRR23 ATPIN1 emb2184 LQY1 AT1G76450 AT1G77090 AT1G79150 RPI2 ATMEPCT ATSULA AtFBA1 AT2G21530 ATRNR1 AT2G21960 CYP79B3 NAPRT2 YCF37 eIFiso4G2 PRPL35 AT2G27680 UXS6 PY ATFC-II AT2G33180 EDA3 GDCH SKL2 AT2G36145 MAT3 ADK AT2G37500 AT2G43560 FAB2 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATGSTF11 EMB3119 AT3G04840 RPL18 ATYLMG1-1 ADK1 AT3G10610 GYRA PGK1 ESM1 AT3G15460 MFP1 NDF4 MAT4 DAC RACK1C ATPURC AT3G22210 AT3G23940 HCF101 ATL5 ATTSO2 DEG1 ATHD2A PTAC16 DUT1 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 PYRR HCEF1 PPL1 SBPASE AT3G56010 ADSS GUN4 AT3G59780 AT3G61870 CYP20-3 CSP41A AtcpRRF EMB3126 ANTR2 AT4G00895 TROL AT4G02530 PETC ATPC1 APX4 ATNDK1 ATPD NDPK3 AT4G12600 CYP83A1 AtCLA1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 LIL3:1 AT4G18440 AK-HSDH APT3 PGR5-LIKE AT4G24350 AT4G24830 SKS1 ATFIB2 AtFBA7 AR192 AT4G27700 AT4G28740 ATHMA2 AHA2 FAD6 PGR3 PDE334 ATBT1 ATH1 AtGLDP1 ATHDA14 AtHMAC6 AT4G34090 SEP1 ASE2 ATHMA1 AtFBA2 ATPDX1 AT5G02870 ADK2 AtNCS1 SBE2.2 2-Cys AT5G07090 AT5G08050 HEMC PDE340 AT5G08650 PMDH2 AT5G10920 APT5 AO ENH1 PCB2 ADG2 CaS HCF136 PGL5 AT5G27390 ARRPS1 AT5G35170 ATGSL1 G6PD1 atylmg3 OLI7 AT5G44520 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AMK2 ADG1 HINT3 MMT CP31B AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 ATFTSZ1-1 NdhN CLB4 AHA11 DXR ATNDPK2 ATLFNR1
GO:0009117 nucleotide metabolic process	BP	2.293e-45	POR LIP2 emb2394 LPA19 ATPCNA1 ABC1 CRB ATGSTU18 ATFD1 AT1G12800 AT1G13730 PnsL2 AT1G14345 NDF1 AT1G16080 GLYR2 AT1G18060 NDF6 LHCA2*1 ATLFNR2 DRT112 AT1G22630 AT1G23410 AOR G6PD3 AT1G28395 AT1G28530 GlcNAc1pUT1 AT-IE PRK AT1G32470 FdC2 AT1G36280 GAPB ATMCM2 RACK1B FTSH1 GDC1 AT1G51110 ATMUM4 EMB3108 ARP2 ATSCO1 AT1G62780 ISPF NDF2 AT1G64880 AT1G65230 pde194 CER6 FLN2 CRR23 ATPIN1 emb2184 LQY1 AT1G76450 AT1G77090 AT1G79150 RPI2 ATMEPCT ATSULA AtFBA1 AT2G21530 ATRNR1 AT2G21960 CYP79B3 NAPRT2 YCF37 eIFiso4G2 PRPL35 AT2G27680 UXS6 PY ATFC-II AT2G33180 EDA3 GDCH SKL2 AT2G36145 ADK AT2G37500 AT2G43560 FAB2 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATGSTF11 EMB3119 AT3G04840 RPL18 ATYLMG1-1 AT3G10610 GYRA PGK1 ESM1 AT3G15460 MFP1 NDF4 DAC RACK1C ATPURC AT3G22210 AT3G23940 HCF101 ATL5 ATTSO2 DEG1 ATHD2A PTAC16 DUT1 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G56010 ADSS GUN4 AT3G59780 AT3G61870 CYP20-3 CSP41A AtcpRRF EMB3126 ANTR2 AT4G00895 TROL AT4G02530 PETC ATPC1 APX4 ATNDK1 ATPD NDPK3 AT4G12600 CYP83A1 AtCLA1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 LIL3:1 AT4G18440 AK-HSDH PGR5-LIKE AT4G24830 SKS1 ATFIB2 AtFBA7 AR192 AT4G27700 AT4G28740 ATHMA2 AHA2 FAD6 PGR3 PDE334 ATBT1 ATH1 AtGLDP1 ATHDA14 AtHMAC6 AT4G34090 SEP1 ASE2 ATHMA1 AtFBA2 ATPDX1 AT5G02870 SBE2.2 2-Cys AT5G07090 AT5G08050 HEMC PDE340 AT5G08650 PMDH2 AT5G10920 APT5 AO ENH1 PCB2 ADG2 CaS HCF136 PGL5 AT5G27390 ARRPS1 AT5G35170 ATGSL1 G6PD1 atylmg3 OLI7 AT5G44520 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AMK2 ADG1 HINT3 CP31B AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 ATFTSZ1-1 NdhN CLB4 AHA11 DXR ATNDPK2 ATLFNR1
GO:0006753 nucleoside phosphate metabolic process	BP	3.550e-45	POR LIP2 emb2394 LPA19 ATPCNA1 ABC1 CRB ATGSTU18 ATFD1 AT1G12800 AT1G13730 PnsL2 AT1G14345 NDF1 AT1G16080 GLYR2 AT1G18060 NDF6 LHCA2*1 ATLFNR2 DRT112 AT1G22630 AT1G23410 AOR G6PD3 AT1G28395 AT1G28530 GlcNAc1pUT1 AT-IE PRK AT1G32470 FdC2 AT1G36280 GAPB ATMCM2 RACK1B FTSH1 GDC1 AT1G51110 ATMUM4 EMB3108 ARP2 ATSCO1 AT1G62780 ISPF NDF2 AT1G64880 AT1G65230 pde194 CER6 FLN2 CRR23 ATPIN1 emb2184 LQY1 AT1G76450 AT1G77090 AT1G79150 RPI2 ATMEPCT ATSULA AtFBA1 AT2G21530 ATRNR1 AT2G21960 CYP79B3 NAPRT2 YCF37 eIFiso4G2 PRPL35 AT2G27680 UXS6 PY ATFC-II AT2G33180 EDA3 GDCH SKL2 AT2G36145 ADK AT2G37500 AT2G43560 FAB2 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATGSTF11 EMB3119 AT3G04840 RPL18 ATYLMG1-1 AT3G10610 GYRA PGK1 ESM1 AT3G15460 MFP1 NDF4 DAC RACK1C ATPURC AT3G22210 AT3G23940 HCF101 ATL5 ATTSO2 DEG1 ATHD2A PTAC16 DUT1 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G56010 ADSS GUN4 AT3G59780 AT3G61870 CYP20-3 CSP41A AtcpRRF EMB3126 ANTR2 AT4G00895 TROL AT4G02530 PETC ATPC1 APX4 ATNDK1 ATPD NDPK3 AT4G12600 CYP83A1 AtCLA1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 LIL3:1 AT4G18440 AK-HSDH PGR5-LIKE AT4G24830 SKS1 ATFIB2 AtFBA7 AR192 AT4G27700 AT4G28740 ATHMA2 AHA2 FAD6 PGR3 PDE334 ATBT1 ATH1 AtGLDP1 ATHDA14 AtHMAC6 AT4G34090 SEP1 ASE2 ATHMA1 AtFBA2 ATPDX1 AT5G02870 SBE2.2 2-Cys AT5G07090 AT5G08050 HEMC PDE340 AT5G08650 PMDH2 AT5G10920 APT5 AO ENH1 PCB2 ADG2 CaS HCF136 PGL5 AT5G27390 ARRPS1 AT5G35170 ATGSL1 G6PD1 atylmg3 OLI7 AT5G44520 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AMK2 ADG1 HINT3 CP31B AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 ATFTSZ1-1 NdhN CLB4 AHA11 DXR ATNDPK2 ATLFNR1
GO:0019693 ribose phosphate metabolic process	BP	4.787e-45	POR LIP2 emb2394 LPA19 ABC1 CRB ATGSTU18 ATFD1 AT1G12800 PnsL2 AT1G14345 NDF1 AT1G16080 GLYR2 AT1G18060 NDF6 LHCA2*1 ATLFNR2 DRT112 AT1G22630 G6PD3 AT1G28530 PRK AT1G32470 FdC2 AT1G36280 GAPB RACK1B FTSH1 GDC1 AT1G51110 EMB3108 ATSCO1 AT1G62780 ISPF NDF2 AT1G64880 AT1G65230 pde194 FLN2 CRR23 emb2184 LQY1 AT1G76450 AT1G77090 AT1G79150 RPI2 ATSULA AtFBA1 AT2G21530 AT2G21960 YCF37 PRPL35 AT2G27680 PY ATFC-II AT2G33180 EDA3 GDCH AT2G36145 AT2G37500 AT2G43560 AT2G44920 PSAP ATCYP38 ATBCA1 ATF1 ATGSTF11 EMB3119 AT3G04840 RPL18 ATYLMG1-1 GYRA PGK1 ESM1 AT3G15460 MFP1 NDF4 DAC RACK1C AT3G22210 AT3G23940 HCF101 ATL5 DEG1 ATHD2A PTAC16 PEX11B AT3G47650 AT3G48200 AT3G48420 GSA2 OEC33 ATG4 FTSZ2-2 HCEF1 PPL1 SBPASE AT3G56010 ADSS GUN4 AT3G59780 AT3G61870 CSP41A AtcpRRF EMB3126 ANTR2 AT4G00895 AT4G02530 PETC ATPC1 APX4 ATNDK1 ATPD NDPK3 CYP83A1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 LIL3:1 AT4G18440 PGR5-LIKE ATFIB2 AtFBA7 AR192 AT4G27700 AT4G28740 ATHMA2 AHA2 PGR3 PDE334 AtGLDP1 ATHDA14 AtHMAC6 AT4G34090 SEP1 ATHMA1 AtFBA2 ATPDX1 AT5G02870 SBE2.2 2-Cys AT5G07090 AT5G08050 HEMC PDE340 AT5G08650 PMDH2 ENH1 PCB2 ADG2 CaS HCF136 PGL5 AT5G27390 ARRPS1 ATGSL1 G6PD1 atylmg3 OLI7 AT5G44520 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. ADG1 HINT3 CP31B AT5G51110 At-NEET ATPGMP AT5G52780 AT5G52970 AtPLR1 ATFTSZ1-1 NdhN CLB4 AHA11 DXR ATNDPK2 ATLFNR1
GO:0034660 ncRNA metabolic process	BP	7.197e-45	POR LIP2 emb2394 ABC1 CRB ATSRS AT1G12800 GAPA-2 LSMT-L FUG1 NDF6 LHCA2*1 ATLFNR2 SRD2 PRK AT1G32470 ABCI7 PRPL11 RPL21C GAPB CP22 Lhca5 GATB AT1G52220 PSAH-2 AtTLP18.3 AT1G56500 ATSCO1 AT1G62780 ISPF AT1G65230 PSBY FLN2 AP40 emb2184 LQY1 AT1G76450 AT1G78010 APG2 EMB2761 AT2G13440 PSB29 AtFBA1 AT2G21530 OVA4 AT2G26500 AT2G27680 PBCP AT2G30695 FIONA PRORP1 DAL EDA3 GDCH AT2G35410 ATSIG6 AT2G37660 AT2G39670 LHCB4.3 AT2G43560 PSAP ATCYP38 EMB2768 TRX AT3G07670 PTAC13 AT3G11964 AT3G13120 AT3G13180 ATKRS-2 PRPS20 MFP1 HCF107 DAC EMB1865 PSBTN HCF101 PLSP1 ATPRX GAPA CCB1 AT3G27180 AT3G44740 ATHD2A PTAC16 AT3G47070 AT3G47650 EDD GSA2 AT3G49640 OEC33 AT3G51140 ATG4 HCEF1 PPL1 OVA1 SBPASE AT3G56300 AT3G58140 GUN4 AT3G61870 APG3 ATIPT3 CSP41A EMB3126 AT3G63510 TROL AT4G02530 EMB3129 PETC EMB2369 ATPC1 APX4 ATPD AT4G12600 ATNS1 LIL3:1 CH-42 PTAC14 PSBQ PGR5-LIKE AT4G24750 ACP4 CHLM ATFIB2 EMB1923 emb2726 PGR3 PDE334 AT4G33760 SEP1 AT4G34730 MRL1 HCF244 AtFBA2 SAMC1 AT5G07020 HEMC AT5G08650 PMDH2 AT5G10605 AT5G10620 AT5G11480 ATTERC EMB3136 AT5G16130 EMB2247 ENH1 AT5G17660 ATOBGC PCB2 ADG2 AT5G22440 EMB1030 CaS HCF136 ARRPS1 AT5G38520 AT5G47970 OVA2 AT5G50110 FSD2 AT5G51110 OVA6 AT5G52970 AT5G55220 NPL1 AT5G58330 ATERS EMB3144 ATLFNR1
GO:0006073 cellular glucan metabolic process	BP	2.742e-44	ATCSLD5 AtBE2 POR AT1G04040 iPGAM1 ATPMEPCRA ATSS3 ATNRT1 AT1G12500 AT1G12800 LSMT-L NDF6 AT1G22630 AT1G23410 Cpn60beta4 IMPL1 AK-HSDH CYP97A3 GBSS1 Aty2 CP22 AT1G49380 ABCD2 AT1G56190 AT1G56500 ARP2 ATSCO1 AT1G62780 REB1 AT1G65230 AT1G66180 AT1G68600 AXY4 PG2 PGM2 AT1G73600 AtGH9B7 AMY2 AT1G76450 AT1G77090 ATGSTU20 APG2 AtFBA1 AT2G21530 BASS2 AGO4 PY ATFC-II BAM6 ATCSLB03 ATCSLB04 NHL12 AT2G36145 AT2G37660 NTRC PHR2 PnsL3 LSF1 AT3G01660 AT3G01810 ATF1 ATGSTF11 AtUGP1 ATSFR2 AT3G07670 AT3G08600 AT3G09050 LSF2 PGK1 ESM1 MFP1 NDF4 EMB2083 DAC EMB1270 ABCI12 AT3G22210 XTH16 HCF101 AT3G28760 AT3G48200 AT3G48420 FTSZ2-2 HCEF1 PDE329 SBPASE AT3G56010 AT3G56370 AT3G59780 AT3G60750 BAM2 EMB3129 ATPC1 APX4 ATPD AT4G10300 CYP83A1 AtBAM3 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G20760 ATRP1 PGR5-LIKE ATCSLG3 AT4G27700 AT4G30020 AHA2 PGR3 AtGLDP1 ATHDA14 AT4G33500 CAT2 XTH7 AtFBA2 APL3 TBL3 ATPDX1 AT5G01590 AT5G02940 SBE2.2 AGAL2 CESA5 PPD5 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. DiT1 ATGSL12 AtENODL17 BAM9 ADG2 CaS ATSS1 AT5G27560 AT5G28500 atylmg3 APE1 CRR7 DEG8 ADG1 CP31B ATPGMP AtPLR1 AT5G55220 GDPDL4 APO2 NPL1 NdhN AT5G58330 CLB4 ATGT18 DXR XTH6
GO:0044042 glucan metabolic process	BP	2.742e-44	ATCSLD5 AtBE2 POR AT1G04040 iPGAM1 ATPMEPCRA ATSS3 ATNRT1 AT1G12500 AT1G12800 LSMT-L NDF6 AT1G22630 AT1G23410 Cpn60beta4 IMPL1 AK-HSDH CYP97A3 GBSS1 Aty2 CP22 AT1G49380 ABCD2 AT1G56190 AT1G56500 ARP2 ATSCO1 AT1G62780 REB1 AT1G65230 AT1G66180 AT1G68600 AXY4 PG2 PGM2 AT1G73600 AtGH9B7 AMY2 AT1G76450 AT1G77090 ATGSTU20 APG2 AtFBA1 AT2G21530 BASS2 AGO4 PY ATFC-II BAM6 ATCSLB03 ATCSLB04 NHL12 AT2G36145 AT2G37660 NTRC PHR2 PnsL3 LSF1 AT3G01660 AT3G01810 ATF1 ATGSTF11 AtUGP1 ATSFR2 AT3G07670 AT3G08600 AT3G09050 LSF2 PGK1 ESM1 MFP1 NDF4 EMB2083 DAC EMB1270 ABCI12 AT3G22210 XTH16 HCF101 AT3G28760 AT3G48200 AT3G48420 FTSZ2-2 HCEF1 PDE329 SBPASE AT3G56010 AT3G56370 AT3G59780 AT3G60750 BAM2 EMB3129 ATPC1 APX4 ATPD AT4G10300 CYP83A1 AtBAM3 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G20760 ATRP1 PGR5-LIKE ATCSLG3 AT4G27700 AT4G30020 AHA2 PGR3 AtGLDP1 ATHDA14 AT4G33500 CAT2 XTH7 AtFBA2 APL3 TBL3 ATPDX1 AT5G01590 AT5G02940 SBE2.2 AGAL2 CESA5 PPD5 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. DiT1 ATGSL12 AtENODL17 BAM9 ADG2 CaS ATSS1 AT5G27560 AT5G28500 atylmg3 APE1 CRR7 DEG8 ADG1 CP31B ATPGMP AtPLR1 AT5G55220 GDPDL4 APO2 NPL1 NdhN AT5G58330 CLB4 ATGT18 DXR XTH6
GO:0016043 cellular component organization	BP	5.724e-43	ATGPAT4 ATCSLD5 LPA1 ATWEE1 POR ATBARD1 AT1G04040 SDG13 AT1G04680 CTF18 AT1G04770 AT1G05140 emb2394 LPA19 UGT1 CCR2 ATPCNA1 ATLIG1 ABC1 BIP3 CRB iPGAM1 ATRECQ4A SCM ATPMEPCRA AT1G11860 ATSRS ATNRT1 AT1G12800 GAPA-2 LSMT-L AT1G14270 AT1G14345 ATWHY1 ATMAP70-4 ATECB2 CYCA2;3 CP24 NDF1 AT1G16080 HCF173 UP6 FUG1 AT1G18060 ATLP-1 ATNACK1 JMT ATCLH1 ATLFNR2 DRT112 AT1G20950 AT1G21350 LYM1 AT1G23410 AT-EXP10 AT1G28570 ATSCAR3 AT1G29700 PRK AtLrgB AT1G32470 ABCI7 AT1G32730 PRPL11 At-FANCM RPL21C AT1G36390 SKS6 GAPB Aty2 AT1G44000 CP22 ATMCM2 AT1G44920 Lhca5 EMB3105 RACK1B AT1G49380 POLGAMMA2 GDC1 HTA10 AT1G51110 4CL.1 AT1G52220 PSAH-2 AtPERK15 mMDH1 AtTLP18.3 AT1G55260 ATNAS4 AT1G56500 SVB ZCF125 CCB4 ABC4 ATFD2 ARP2 ACO2 ATSCO1 AT1G62780 AT1G63470 AT1G63610 ISPF AT1G64500 AT1G64510 CDI Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication). 4CL3 AT1G65230 AT1G66180 ATGSR2 PMI2 AT1G67690 PSBY BBX14 CER6 PSRP3/1 FLN2 AT1G69420 AT-EXP1 PG2 ATPIN3 AtRLP11 ANAC030 AT1G72270 AP40 LPA3 AT1G73110 ATPIN1 ENO1 NDH-O JAC1 AT1G75150 emb2184 AtGH9B7 LQY1 AT1G76450 TAPX LYM3 EMB1047 CS17 AT1G80030 APG2 AT2G01210 ATPIN4 LCR68 ATEXP15 AtHsp90.5 FLA7 AT2G05920 MCM5 ARAC1 ATPRMT1A PLA2-BETA ATEXPB1 PSB29 PDTPI ATSULA AtFBA1 AT2G21530 ATRNR1 CYP79B3 IAA8 CLF ATMES3 YCF37 AT2G24060 ATWRKY60 AtENODL14 AT2G25270 AT2G25830 OVA4 CYP711A1 AT2G26500 SCAB1 AGO4 AT2G27680 CH-CPN60A AT2G28620 ATEXP6 ANTR1 MAPKKK14 PBCP RPT2 AT2G30695 TCP10 FIONA ATCDT1A MRL7-L ARASP AT2G33180 DAL BUBR1 ATRANGAP2 AT2G34450 HMR ATHB-14 EDA3 GDCH AT2G35410 SKL2 MAT3 ABCB1 ATSIG6 AT2G37100 ATEXP3 AT2G37660 ATCAX1 PnsL1 AT2G39670 RCA ETG1 ATEXP8 AT2G41050 MIZ1 NTRC AT2G42130 AT2G43560 FAB2 AT2G43945 AGP8 ABIL1 SPA1 PSAP ATCYP38 ATBCA1 AT3G01810 ATCOL2 AT3G02640 EMB2768 AtUGP1 SDG31 EMB3119 AT3G05470 TRX ATYLMG1-1 AT3G07670 PIP5K6 AT3G08740 ATERDJ3A AT3G09050 AT3G09200 PTAC13 LCL5 IDH-VI OMR1 GYRB1 AT3G10310 AT3G10610 GYRA CYC2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. ACT11 PGK1 AT3G12930 AT3G13120 AT3G13180 Cpn60beta2 ATKRS-2 AT3G13510 AT3G15680 MFP1 AT3G16370 HCF107 RLK902 DAC EMB1270 AT3G18280 EMB1865 AT3G19030 ATPREP1 AT3G19370 QWRF1 AT3G20010 AT3G20150 AT3G20260 PSBTN ATTSO1 ATSR2 FIB4 MED33A ATSAHH2 ATTOPII HCF101 PLSP1 AFH1 ORF02 GAPA CCB1 EMB3123 KLCR2 ATEXP5 AT3G43610 MAR1 PTAC16 AT3G47070 PEX11B AT3G47650 EDD AT3G48200 AT3G48420 AtSWEET11 AT3G49220 DMS3 BAM2 OEC33 AT3G51140 AT3G51280 ATG4 AT3G52170 CP33 FTSZ2-2 MIDD1 ACT3 ATGCP4 HCEF1 ATGR2 AT3G54750 PDE329 PPL1 ATTSC13 SBPASE AT3G56290 AT3G56370 PPD6 PSRP5 PrfB3 GIS AT3G58140 PME35 GUN4 ATRAD21.2 CDS5 ATHAM2 AT3G60750 ATPIP1 ARATH;BSAS3;1 AT3G61870 APG3 ATIPT3 CSP41A AtcpRRF EMB3126 AT3G66652 BRCA2(IV) ATHAM3 TROL GT72B1 MCM7 AT4G02530 EMB3129 PETC EMB2369 ATPC1 ATPD AT4G11175 AtENODL19 ATSAHH1 AtPRD1 AT4G14200 AT4G14360 PPD1 SPK1 ATOPT3 SVR7 AT-EXPR AT4G17390 LIL3:1 AG PAM68 PTAC14 PSBQ sks4 AT4G22830 PGR5-LIKE CCS52A1 AESP 3xHMG-box2 ARC1 cpHsc70-1 AT4G24750 ATRBP31 ACP4 AT4G26660 AR192 VTC2 AT4G27640 EMB1923 ATEXPB3 MRL7 PSB28 GrxC5 AT4G28740 emb2726 AT4G30020 AHA2 AT4G30800 AtENODL15 PGR3 PDE334 ATBT1 ATH1 ATCBL10 AtGLDP1 ATPME44 AT4G33400 ATHDA14 AT4G33760 SEP1 ATCAP1 AT4G34730 ASE2 MRL1 HCF244 MCA1 BGAL3 ROT3 AT4G37295 NDH-M pde191 AT4G38660 AtFBA2 AT4G39040 SAMC1 AT4G39630 TBL3 AT5G01590 ATOFP1 OHP AT5G02870 ATCSLA09 54CP GYRB2 FD-GOGAT SIR ATNAS1 EMB2771 ATEGY2 2-Cys AT5G07020 SMC6A ATRPA70B AT5G08050 AGAL2 AT5G08400 AT5G08650 AtPPa6 PMDH2 AT5G09760 AT5G10020 AT5G10390 KAC1 HY5 PPD5 AT5G11480 AtMYB3R4 ATTERC Encodes a protein with similarity to REN1, a Rho GTPase activating protein. ATGSL12 ATCYP20-2 AT5G13140 EMB3136 AT5G13770 AT5G14610 ATDEF2 AT5G15050 AtENODL17 APG6 GAUT14 DHAR3 EMB2247 AT5G17160 ENH1 AtUGP2 ATOBGC EMB3013 ADG2 ATOEP80 AT5G19730 AT5G20700 ATCPN21 CRR42 AT5G22340 emb1211 H2B CaS HCF136 AT5G23480 EFO2 ARC11 ATSIG5 LSU2 AT5G25590 MK AT5G27560 BIP1 ARRPS1 AMOS1 ATGSL1 atylmg3 ASF1B AT5G38520 APE1 CRR7 DEG8 EMB139 BIP ARC6 TZP NDH18 SDG18 MCM6 AtCEST MCM3 AT5G46580 TET1 Encodes the mitochondrial ATP synthase subunit delta. GFA2 ADG1 AT5G48360 LPA66 HCT ATPRMT4A OVA2 CP31B AT5G50420 FSD2 AT5G51110 ATPGMP OVA6 AT5G52780 AT5G52950 AT5G52970 TRY PDV1 ATPMEPCRF PTAC15 THE1 RPL24 ANK ATK3 AT5G55220 ATFTSZ1-1 GDPDL4 AT5G55520 ATEXP14 PFN3 APO2 NPL1 AT5G58160 NdhN AT5G58330 AT5G59600 AT5G59740 AT5G59850 HTA6 CLB4 PDCB1 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. AGD1 ANAC101 CDF1 ATRMI1 AT5G63700 ATERS EMB3144 AT5G65360 BAM1 ATLFNR1 AT5G66470 AT5G66740 ATDDM1 ICU2 AT5G67200
GO:0000023 maltose metabolic process	BP	1.145e-42	AtBE2 POR LSMT-L NDF6 AT1G22630 Cpn60beta4 IMPL1 AK-HSDH CYP97A3 Aty2 CP22 AT1G49380 ABCD2 AT1G56190 AT1G56500 ATSCO1 AT1G62780 AT1G68600 PGM2 AT1G73600 AT1G76450 AT1G77090 ATGSTU20 APG2 AT2G21530 BASS2 AGO4 PY ATFC-II NHL12 AT2G36145 PHR2 PnsL3 LSF1 AT3G01660 ATF1 AtUGP1 ATSFR2 AT3G07670 AT3G09050 LSF2 PGK1 MFP1 EMB2083 DAC EMB1270 ABCI12 AT3G22210 HCF101 AT3G28760 AT3G48200 FTSZ2-2 HCEF1 PDE329 SBPASE AT3G56010 AT3G59780 BAM2 EMB3129 ATPC1 AT4G10300 AtBAM3 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. ATRP1 PGR5-LIKE AT4G27700 AT4G30020 PGR3 AtGLDP1 ATHDA14 AT4G33500 ATPDX1 AT5G02940 SBE2.2 AGAL2 PPD5 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. CaS ATSS1 AT5G27560 AT5G28500 atylmg3 APE1 CRR7 DEG8 ADG1 CP31B ATPGMP AtPLR1 AT5G55220 APO2 NPL1 NdhN AT5G58330 DXR
GO:0016109 tetraterpenoid biosynthetic process	BP	2.887e-42	POR CCR2 ABC1 CRB AT1G11860 AT1G12800 NDF1 AT1G16080 AOR CYP97A3 ACT1 AT1G49380 AtTLP18.3 ZKT CPN60B AT1G56500 AT1G57770 ISPF AT1G65230 CER6 AT1G73110 AT1G80030 ATMEPCT ATSULA AT2G21385 CYP711A1 AT2G27680 ATFC-II AT2G32640 EDA3 ATSIG6 NTRC FAB2 AT2G44920 PHR2 ATCYP38 ATHST ADS3 EMB1865 HCF101 ATPRX ORF02 PTAC16 AT3G48420 AT3G50685 ATG4 CYP97C1 HCEF1 GUN4 AT3G59780 APG3 AT4G02530 PDE226 AtCLA1 CH-42 B1 emb2726 FAD6 ATH1 HCF244 AT4G39040 SQD2 FD-GOGAT AT5G07020 PMDH2 PSY PCB2 AtHBP5 HCF136 ATFKBP13 AMK2 OVA2 B2 AT5G55220 LUT2 NdhN CLB4 DXR ABA1
GO:0016117 carotenoid biosynthetic process	BP	2.887e-42	POR CCR2 ABC1 CRB AT1G11860 AT1G12800 NDF1 AT1G16080 AOR CYP97A3 ACT1 AT1G49380 AtTLP18.3 ZKT CPN60B AT1G56500 AT1G57770 ISPF AT1G65230 CER6 AT1G73110 AT1G80030 ATMEPCT ATSULA AT2G21385 CYP711A1 AT2G27680 ATFC-II AT2G32640 EDA3 ATSIG6 NTRC FAB2 AT2G44920 PHR2 ATCYP38 ATHST ADS3 EMB1865 HCF101 ATPRX ORF02 PTAC16 AT3G48420 AT3G50685 ATG4 CYP97C1 HCEF1 GUN4 AT3G59780 APG3 AT4G02530 PDE226 AtCLA1 CH-42 B1 emb2726 FAD6 ATH1 HCF244 AT4G39040 SQD2 FD-GOGAT AT5G07020 PMDH2 PSY PCB2 AtHBP5 HCF136 ATFKBP13 AMK2 OVA2 B2 AT5G55220 LUT2 NdhN CLB4 DXR ABA1
GO:0034641 cellular nitrogen compound metabolic pro...	BP	3.150e-42	LHY ASG4 ATCSLD5 ATWEE1 POR ATBARD1 AXR3 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase BDL LIP2 CTF18 emb2394 LPA19 BT3 ATNTH2 ATPCNA1 ATLIG1 ABC1 emb2411 CRB ATGSTU18 ATGSTU17 AT1G10585 ATRECQ4A ATFD1 CRR22 ATSRS AT1G12244 PHR1 AT1G12800 GAPA-2 AT1G13730 LSMT-L PnsL2 AT1G14345 AtMYB124 ATWHY1 AT1G14460 AT1G14600 ATECB2 CYCA2;3 AT1G15970 NDF1 AT1G16080 FUG1 GLYR2 AT1G18060 AT1G18090 AT1G18440 AT1G18485 AT1G18540 ATSOT17 NDF6 LHCA2*1 BES1 AT1G19490 ATCLH1 ATLFNR2 DRT112 AT1G20950 ATOGG1 AGL87 AT1G22630 AT1G23410 AOR MLP423 G6PD3 Cpn60beta4 AT1G26790 AT1G26880 AtHB23 ATHB54 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. SPL11 AT1G27480 AT1G28395 AT1G28530 SRD2 GlcNAc1pUT1 CYP97A3 AT-IE AT1G31920 STRS1 PRK ACT1 NRT1.5 AT1G32470 ABCI7 FdC2 PRPL11 At-FANCM AT1G35560 RPL21C AT1G36280 ATNR2 GAPB ATCAO CP22 ATMCM2 Lhca5 DYW1 GATB RACK1B AT1G49010 AT1G49380 FTSH1 POLGAMMA2 GDC1 bHLH115 AT1G51080 AT1G51110 4CL.1 AT1G52220 PSAH-2 AT1G52510 PLDALPHA2 SPA4 ATMUM4 AT1G54500 AtTLP18.3 AT1G55140 NDF5 HAC04 AT1G56050 ATNAS4 AT1G56500 AtMYB50 ATATP-PRT1 AtHEMA1 ZCF125 CRR28 EMB3108 AT1G60590 ABC4 ARP2 AT1G62250 FMO ATSCO1 AT1G62780 AT1G63470 ISPF AT1G64680 NDF2 RPOD1 AT1G64880 AT1G65070 AT1G65230 ATGSR2 AtMYB20 pde194 AT1G67690 PSBY CSK AT1G68440 BBX14 CER6 PHO1;H1 STN7 FLN2 AT1G70000 AT1G70280 ABCB26 CRR23 AT1G71480 ANAC030 AT1G72270 AP40 ATPIN1 BBX16 AT1G74070 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G75090 AT1G75150 emb2184 LQY1 AT1G76450 AT1G77090 AT1G77670 AT1G77750 GNR1 AT1G78010 ATGSTU20 AT1G78995 AT1G79150 AT1G80850 APG2 AT2G01210 RPI2 ATMEPCT ATWHY3 OTP85 AT2G04790 EMB2761 AT2G05920 MCM5 AT2G13440 AT2G14285 BLH7 AT2G17972 AT2G20450 MEF21 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 AT2G21530 ATRL2 ATRNR1 AT2G21960 ATIPS2 CYP79B3 IAA8 CLF NAPRT2 YCF37 eIFiso4G2 AT2G24060 PRPL35 PDE319 AT2G24350 AT2G24580 ATWRKY60 ESE2 AT2G25830 OVA4 AT2G26500 ATCDPMEK AGO4 AT2G27680 AT2G27710 ARF10 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 UXS6 AT2G29180 AT2G29360 PY MAPKKK14 PBCP AT2G30320 ATFC-II TCL2 AT2G30695 TCP10 FIONA ATERF15 ATCDT1A BBX25 AT2G31670 MRL7-L AT2G32060 ATOFP16 PRORP1 ATCOP1 AT2G33180 DAL BUBR1 HMR ATHB-14 NF-YA4 EDA3 GDCH AT2G35410 SKL2 ATERF38 AT2G35760 AT2G36145 RPL24A MAT3 ATSIG6 ATPAL1 ADK AT2G37500 AS1 AT2G37660 PDX1L4 AT2G39240 SNZ ATRPL23A PnsL1 AT2G39670 LHCB4.3 AT2G40200 AT2G40400 HEME2 ETG1 ARR16 SSL2 ARR8 NTRC ATLEUD1 AT2G43560 FAB2 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. KPHMT1 AT2G46250 SPA1 ATCB5-C PSAP AtCCA1 PHR2 ATCYP38 ATBCA1 AT3G01660 EMB2768 ATF1 AT3G02820 ATGSTF11 EMB3119 AT3G04840 ATRAD9 AT3G05560 RPL18 TRX AT3G07110 AT3G07270 ATYLMG1-1 AT3G07670 AT3G08740 AT3G09050 AT3G09200 PTAC13 AT3G09580 LCL5 ADK1 GYRB1 AT3G10310 AT3G10610 GYRA AT3G10760 AT3G10840 AT3G11510 CYC2 AT3G11964 PGK1 AT3G13000 AT3G13120 AT3G13180 ATKRS-2 AT3G13510 AGP12 ESM1 AT3G14330 HEME1 PRPS20 AT3G15460 AT3G15520 ADS3 MFP1 AT3G16080 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. HCF107 ECT6 MAT4 HYH DAC WOX1 RACK1C EMB1865 ATUNG AtTic62 AT3G19030 BCAT4 AT3G20010 AT3G20150 PSBTN ATPURC AtBBX32 GluTRBP BBX31 AT3G22150 AT3G22210 ATTSO1 ELIP bHLH34 ATTOPII AT3G23940 ATGR1 HCF101 PLSP1 ATL5 CRF11 RPL15 ATPRX GAPA CCB1 DRB3 ATTSO2 AT3G27180 AT3G27640 EMB3123 DEG1 CHR38 ATGSTU27 anac061 AT3G44590 AT3G44740 ATHD2A ATMYB48 PTAC16 DUT1 AT3G47070 PEX11B AT3G47650 AT3G47830 EDD AT3G48200 AT3G48420 AT3G48425 AT3G48440 GSA2 AT3G48830 ATBBC1 DMS3 AT3G49640 ICK2 OEC33 AT3G51140 AT3G51280 ATG4 AT3G51950 FTSZ2-2 CYP97C1 ATPAL2 AT3G53680 PYRR HCEF1 AT3G54390 ATGR2 AT3G54750 PPL1 OVA1 ATDFD SBPASE AT3G56010 AT3G56290 AT3G56300 AT3G56680 BHLH038 BHLH039 AT3G57010 AT3G57020 AT3G57030 ARR9 BPG2 PrfB3 ADSS GIS AT3G58140 GUN4 ATRAD21.2 AT3G59780 ATHAM2 AT3G61080 ARATH;BSAS3;1 AT3G61870 AT3G61950 CYP20-3 APG3 ATIPT3 CSP41A AtcpRRF OTP86 EMB3126 AT3G63510 AT3G66652 BRCA2(IV) UNE10 ATHAM3 ANTR2 AT4G00895 MEE47 TROL HEMG1 MCM7 AT4G02530 EMB3129 AT4G03090 PETC EMB2369 APR ATPC1 ARGAH2 APX4 ATNDK1 ATPD AT4G10450 AT4G10600 NDPK3 AT4G11100 AT4G11175 AT4G12600 AT4G12830 EPFL9 CYP83A1 ATSAHH1 AtPRD1 AT4G14200 NF-YB3 AT4G15000 AT4G15430 CYP74B2 AtCLA1 AT4G15640 AT4G16141 SVR7 ATNS1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 AT4G17560 LIL3:1 MYC4 DEG5 AT4G18440 CH-42 AT4G18810 AG CMT2 PAM68 CYCT1;2 AK-HSDH PTAC14 PyrD PSBQ AT4G21770 APT3 PGR5-LIKE CCS52A1 AESP AT4G24090 AT4G24350 TAR2 AT4G24750 ATRBP31 AT4G24790 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) AT4G24830 ACP4 CHLM SKS1 AT4G25290 ATFIB2 AtFBA7 AT4G26660 AR192 AT4G27700 EMB1923 MRL7 AT4G28740 AT4G28780 emb2726 ATHMA2 AHA2 AT4G30800 AT4G30825 FAD6 LRL2 ACDO1 PGR3 PDE334 ATBT1 Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development. ATH1 AtGLDP1 AT4G33400 ATHDA14 AtHMAC6 AT4G33760 AT4G34090 SEP1 BLH6 AT4G34730 ASE2 MRL1 HCF244 AT4G35270 GATA7 BGAL3 ATRL3 ATHMA1 pde191 ATMYB4 BBX19 AtFBA2 AT4G39040 SAMC1 AT4G39630 AKN2 SQD2 ATPDX1 ATOFP1 LCL1 AT5G02870 ADK2 AtNCS1 SBE2.2 PTL 54CP GYRB2 ATPAL3 SIR AT5G04840 ATNAS1 EMB2771 AT5G05790 2-Cys AT5G06770 AT5G07020 AT5G07090 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. SMC6A ATMYB29 ATRPA70B AT5G08050 HEMC AGAL2 PDE340 AT5G08650 AT5G09240 AtPPa6 PMDH2 AT5G10605 AT5G10620 AT5G10690 AT5G10920 APT5 HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 TINY2 ATTERC ATGSL12 ABAP1 EMB3136 ABAR SVR3 AO AtbZIP3 ATCOL1 AT5G16130 AtMYB43 EMB2247 ENH1 PSY RVE1 AT5G17660 ATOBGC PCB2 ADG2 AT5G19240 ATMGD2 CRR42 anac090 AT5G22440 EMB1030 IMS3 IMS2 CaS HCF136 AT5G23480 ATSIG5 PGL5 LSU2 CRY3 ESE3 AT5G25590 tny AT5G27390 AT5G28500 ARRPS1 AT5G35170 ATGSL1 G6PD1 AT5G35970 atylmg3 ARF8 CIR1 ASF1B AT5G38520 CRR7 CDF2 OLI7 AT5G40060 UPM1 DRB5 AT5G41760 AT5G42070 ATS CYCA3;1 AT5G43150 NF-YC13 TZP SDG18 AT5G44520 MCM6 AT5G44680 ATFKBP13 AT5G45720 CHL AT5G46220 MCM3 AT5G46390 bHLH071 PYL1 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT5G47620 NF-YB2 AMK2 AT5G47970 ADG1 AT5G48360 HINT3 ATPTS LPA66 OVA2 ATMYB111 MMT AT5G50110 CP31B FSD2 AT5G51110 At-NEET ATPGMP AT5G52010 OVA6 AT5G52780 AT5G52950 AT5G52970 TRY AtPLR1 ATOMT1 PTAC15 AT5G55220 ATFTSZ1-1 CRR21 AT5G56840 AT5G56850 APO2 NPL1 NdhN AT5G58330 DDB2 AT5G59600 AT5G59740 AtRIBA3 AT5G59850 AT5G60130 CLB4 ATMYB34 ATRPA70D AtMYB28 AGL42 ANAC101 CDF1 AHA11 DXR AT5G62840 ARR6 ATNDPK2 ATRMI1 GSA1 AT5G63700 ATERS ATGCH EMB3144 ASN2 ATLFNR1 AT5G66470 AT5G66520 ATDDM1 AT5G66770 ICU2 AT5G67200 MATK
GO:0046483 heterocycle metabolic process	BP	3.845e-42	LHY KCS1 ASG4 ATCSLD5 ATWEE1 AtD27 POR ATBARD1 AXR3 encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase BDL LIP2 CTF18 emb2394 LPA19 BT3 ATNTH2 ATPCNA1 ATLIG1 ABC1 emb2411 CRB ATGSTU18 AT1G10585 ATRECQ4A ATFD1 CRR22 ATSRS AT1G12244 PHR1 AT1G12800 GAPA-2 AT1G13730 LSMT-L PnsL2 AT1G14345 AtMYB124 ATWHY1 AT1G14460 AT1G14600 ATECB2 CYCA2;3 AT1G15970 NDF1 AT1G16080 FUG1 GLYR2 AT1G18060 AT1G18090 AT1G18440 AT1G18485 AT1G18540 ATSOT17 NDF6 LHCA2*1 BES1 AT1G19490 ATCLH1 ATLFNR2 DRT112 AT1G20950 ATOGG1 AGL87 AT1G22630 AT1G23410 AOR MLP423 G6PD3 ATSOFL1 Cpn60beta4 AT1G26790 AT1G26880 AtHB23 ATHB54 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. SPL11 AT1G27480 AT1G28395 AT1G28530 SRD2 GlcNAc1pUT1 CYP97A3 AT-IE AT1G31920 STRS1 PRK ACT1 AT1G32470 ABCI7 FdC2 PRPL11 At-FANCM AT1G35560 RPL21C AT1G36280 GAPB ATCAO CP22 ATMCM2 Lhca5 DYW1 GATB RACK1B AT1G49010 AT1G49380 FTSH1 POLGAMMA2 GDC1 bHLH115 AT1G51080 AT1G51110 4CL.1 AT1G52220 PSAH-2 ABA2 AT1G52510 SPA4 ATMUM4 AT1G54500 AtTLP18.3 AT1G55140 NDF5 HAC04 AT1G56050 ATNAS4 AT1G56500 AtMYB50 ATATP-PRT1 AtHEMA1 ZCF125 CRR28 EMB3108 AT1G60590 ABC4 ARP2 AT1G62250 ACO2 FMO ATSCO1 AT1G62780 AT1G63470 ISPF AT1G64680 NDF2 RPOD1 AT1G64880 G-TMT AT1G65070 AT1G65230 AtMYB20 pde194 AT1G67690 PSBY CSK BBX14 CER6 PHO1;H1 STN7 FLN2 AT1G70000 AT1G70280 ABCB26 CRR23 AT1G71480 ANAC030 AT1G72270 AP40 ATPIN1 BBX16 AT1G74070 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. AT1G75090 AT1G75150 emb2184 LQY1 AT1G76450 AT1G77090 AT1G77750 AT1G78010 ATGSTU20 AT1G78995 AT1G79150 AT1G80850 APG2 AT2G01210 RPI2 ATMEPCT ATWHY3 OTP85 AT2G04790 EMB2761 AT2G05920 MCM5 AT2G13440 AT2G14285 BLH7 AT2G17972 AT2G20450 MEF21 A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. PSB29 PDTPI Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. ATSULA BBX18 AtFBA1 AT2G21530 ATRL2 ATRNR1 AT2G21960 ATIPS2 CYP79B3 IAA8 CLF NAPRT2 YCF37 eIFiso4G2 AT2G24060 PRPL35 PDE319 AT2G24350 AT2G24580 ATWRKY60 ESE2 AT2G25830 OVA4 CYP711A1 AT2G26500 ATCDPMEK AGO4 AT2G27680 AT2G27710 ARF10 Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). AT2G28620 UXS6 AT2G29180 AT2G29360 PY MAPKKK14 PBCP AT2G30320 ATFC-II TCL2 AT2G30695 TCP10 FIONA ATERF15 ATCDT1A BBX25 AT2G31670 MRL7-L AT2G32060 ATOFP16 PRORP1 ATCOP1 AT2G33180 DAL BUBR1 HMR ATHB-14 NF-YA4 EDA3 GDCH AT2G35410 SKL2 ATERF38 AT2G35760 AT2G36145 RPL24A MAT3 ATSIG6 ATPAL1 ADK AT2G37500 AS1 AT2G37660 PDX1L4 AT2G39240 SNZ ATRPL23A PnsL1 AT2G39670 LHCB4.3 AT2G40200 AT2G40400 HEME2 ETG1 ARR16 ARR8 NTRC ATLEUD1 AT2G43560 FAB2 CHL-CPN10 AT2G44920 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. AT2G46250 SPA1 ATCB5-C PSAP AtCCA1 PHR2 ATCYP38 ATBCA1 AT3G01660 EMB2768 ATF1 AT3G02820 ATGSTF11 EMB3119 AT3G04840 ATRAD9 AT3G05560 RPL18 TRX AT3G07110 AT3G07270 ATYLMG1-1 AT3G07670 AT3G09050 AT3G09200 PTAC13 AT3G09580 LCL5 ADK1 GYRB1 AT3G10310 AT3G10610 GYRA AT3G10760 AT3G10840 AT3G11510 CYC2 AT3G11964 PGK1 AT3G13000 AT3G13120 AT3G13180 ATKRS-2 AT3G13510 ESM1 AT3G14330 HEME1 PRPS20 AT3G15460 AT3G15520 ADS3 MFP1 AT3G16080 NDF4 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. HCF107 ECT6 MAT4 HYH DAC WOX1 RACK1C EMB1865 ATUNG AtTic62 AT3G19030 BCAT4 AT3G20010 AT3G20150 PSBTN ATPURC AtBBX32 GluTRBP 4CL2 BBX31 AT3G22150 AT3G22210 ATTSO1 ELIP bHLH34 ATTOPII AT3G23940 HCF101 PLSP1 ATL5 CRF11 RPL15 ATPRX GAPA CCB1 DRB3 ATTSO2 AT3G27180 AT3G27640 EMB3123 DEG1 CHR38 anac061 AT3G44590 AT3G44740 ATHD2A ATMYB48 PTAC16 DUT1 AT3G47070 PEX11B AT3G47650 AT3G47830 EDD AT3G48200 AT3G48420 AT3G48425 AT3G48440 GSA2 AT3G48830 ATBBC1 DMS3 AT3G49640 ICK2 OEC33 AT3G51140 AT3G51280 ATG4 AT3G51950 FTSZ2-2 CYP97C1 ATPAL2 AT3G53680 PYRR HCEF1 AT3G54390 AT3G54750 PPL1 OVA1 ATDFD SBPASE AT3G56010 AT3G56290 AT3G56300 AT3G56680 BHLH038 BHLH039 ARR9 BPG2 PrfB3 NAGK ADSS GIS AT3G58140 GUN4 ATRAD21.2 AT3G59780 ATHAM2 AT3G61080 ARATH;BSAS3;1 AT3G61870 AT3G61950 CYP20-3 APG3 ATIPT3 CSP41A AtcpRRF OTP86 APG1 EMB3126 AT3G63510 AT3G66652 BRCA2(IV) UNE10 ATHAM3 ANTR2 AT4G00895 MEE47 TROL GT72B1 HEMG1 MCM7 AT4G02530 EMB3129 AT4G03090 PETC EMB2369 APR ATPC1 ARGAH2 APX4 ATNDK1 ATPD AT4G10450 AT4G10600 NDPK3 AT4G11100 AT4G11175 AT4G12600 AT4G12830 EPFL9 CYP83A1 ATSAHH1 AtPRD1 AT4G14200 NF-YB3 AT4G15000 AT4G15430 CYP74B2 AtCLA1 AT4G15640 AT4G16141 SVR7 ATNS1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G17390 AT4G17560 LIL3:1 MYC4 DEG5 AT4G18440 CH-42 AT4G18810 AG CMT2 PAM68 CYCT1;2 AK-HSDH PTAC14 PyrD PSBQ AT4G21770 APT3 PGR5-LIKE CCS52A1 AESP AtDIR6 AT4G24090 AT4G24350 TAR2 AT4G24750 ATRBP31 AT4G24790 similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) AT4G24830 ACP4 CHLM SKS1 AT4G25290 ATFIB2 AtFBA7 AT4G26660 AR192 AT4G27700 EMB1923 MRL7 AT4G28740 AT4G28780 emb2726 ATHMA2 AHA2 AT4G30800 AT4G30825 FAD6 LRL2 ACDO1 PGR3 PDE334 ATBT1 Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development. ATSDX1 ATH1 AtGLDP1 AT4G33400 ATHDA14 AtHMAC6 AT4G33760 AT4G34090 SEP1 BLH6 AT4G34730 ASE2 MRL1 HCF244 AT4G35270 GATA7 ATRL3 AT4G36640 ATHMA1 pde191 ATMYB4 BBX19 AtFBA2 AT4G39040 SAMC1 AT4G39630 AKN2 SQD2 ATPDX1 ATOFP1 LCL1 AT5G02870 ADK2 AtNCS1 SBE2.2 PTL 54CP GYRB2 ATPAL3 SIR AT5G04840 ATNAS1 EMB2771 AT5G05790 UGT76C2 2-Cys AT5G06770 AT5G07020 AT5G07090 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. SMC6A ATMYB29 ATRPA70B AT5G08050 HEMC PDE340 AT5G08650 AT5G09240 AtPPa6 PMDH2 AT5G10605 AT5G10620 AT5G10690 AT5G10920 APT5 HY5 OCP3 PPD5 AT5G11480 AtMYB3R4 TINY2 ATTERC ATGSL12 ABAP1 EMB3136 ABAR SVR3 AO AT-P5C1 AtbZIP3 ATCOL1 AT5G16130 AtMYB43 EMB2247 ENH1 PSY RVE1 AT5G17660 ATOBGC PCB2 ADG2 AT5G19240 ATMGD2 CRR42 ATCKX5 anac090 AT5G22440 EMB1030 IMS3 IMS2 CaS HCF136 AT5G23480 ATSIG5 PGL5 LSU2 AT5G24760 CRY3 ESE3 AT5G25590 tny AT5G27390 AT5G28500 ARRPS1 AT5G35170 ATGSL1 G6PD1 AT5G35970 atylmg3 ARF8 CIR1 ASF1B AT5G38520 CRR7 CDF2 OLI7 AT5G40060 UPM1 DRB5 AT5G41760 AT5G42070 ATS CYCA3;1 AT5G43150 NF-YC13 TZP SDG18 AT5G44520 MCM6 AT5G44680 ATFKBP13 AT5G45720 CHL MCM3 AT5G46390 bHLH071 PYL1 Encodes the mitochondrial ATP synthase subunit delta. encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT5G47620 NF-YB2 AMK2 AT5G47970 ADG1 AT5G48360 HINT3 LPA66 HCT OVA2 ATMYB111 MMT AT5G50110 CP31B FSD2 AT5G51110 At-NEET ATPGMP AT5G52010 OVA6 AT5G52780 AT5G52950 AT5G52970 TRY AtPLR1 ATOMT1 PTAC15 AT5G55220 ATFTSZ1-1 CRR21 AT5G56840 AT5G56850 APO2 NPL1 NdhN AT5G58330 DDB2 AT5G59600 AT5G59740 AtRIBA3 AT5G59850 AT5G60130 CLB4 ATMYB34 ATRPA70D AtMYB28 AGL42 ANAC101 CDF1 AHA11 DXR AT5G62840 ARR6 ATNDPK2 ATRMI1 GSA1 AT5G63700 ATERS ATGCH EMB3144 ATLFNR1 AT5G66470 AT5G66520 ATDDM1 AT5G66770 ICU2 AT5G67200 MATK
GO:0016108 tetraterpenoid metabolic process	BP	1.321e-41	POR CCR2 ABC1 CRB AT1G11860 AT1G12800 NDF1 AT1G16080 AOR CYP97A3 ACT1 AT1G49380 AtTLP18.3 ZKT CPN60B AT1G56500 AT1G57770 ISPF AT1G65230 CER6 AT1G73110 AT1G80030 ATMEPCT ATSULA AT2G21385 CYP711A1 AT2G27680 ATFC-II AT2G32640 EDA3 ATSIG6 NTRC FAB2 AT2G44920 PHR2 ATCYP38 ATHST ADS3 EMB1865 HCF101 ATPRX ORF02 PTAC16 AT3G48420 AT3G50685 ATG4 CYP97C1 HCEF1 GUN4 AT3G59780 APG3 AT4G02530 PDE226 AtCLA1 CH-42 B1 emb2726 FAD6 ATSDX1 ATH1 HCF244 AT4G39040 SQD2 FD-GOGAT AT5G07020 PMDH2 PSY PCB2 AtHBP5 HCF136 ATFKBP13 AMK2 OVA2 B2 AT5G55220 LUT2 NdhN CLB4 DXR ABA1
GO:0016116 carotenoid metabolic process	BP	1.321e-41	POR CCR2 ABC1 CRB AT1G11860 AT1G12800 NDF1 AT1G16080 AOR CYP97A3 ACT1 AT1G49380 AtTLP18.3 ZKT CPN60B AT1G56500 AT1G57770 ISPF AT1G65230 CER6 AT1G73110 AT1G80030 ATMEPCT ATSULA AT2G21385 CYP711A1 AT2G27680 ATFC-II AT2G32640 EDA3 ATSIG6 NTRC FAB2 AT2G44920 PHR2 ATCYP38 ATHST ADS3 EMB1865 HCF101 ATPRX ORF02 PTAC16 AT3G48420 AT3G50685 ATG4 CYP97C1 HCEF1 GUN4 AT3G59780 APG3 AT4G02530 PDE226 AtCLA1 CH-42 B1 emb2726 FAD6 ATSDX1 ATH1 HCF244 AT4G39040 SQD2 FD-GOGAT AT5G07020 PMDH2 PSY PCB2 AtHBP5 HCF136 ATFKBP13 AMK2 OVA2 B2 AT5G55220 LUT2 NdhN CLB4 DXR ABA1
GO:0008652 cellular amino acid biosynthetic process	BP	1.417e-41	POR LIP2 EMB2784 ADT6 AT1G09310 ADT1 ATGLX1 AT1G11860 ATSRS AT1G12800 LSMT-L AT1G15710 CP24 ATSOT17 DRT112 AOR PSAK ATIMD3 AK-HSDH AT-IE PRK AT1G32470 AT1G33110 GAPB ATCAO CP22 bHLH115 AT1G51110 PSAH-2 ABA2 AtTLP18.3 AT1G55260 AGP21 AT1G55360 AT1G56190 ATATP-PRT1 AT1G60000 ACO2 FMO ISPF ATGSR2 AT1G66430 PSBY AT1G68260 CER6 AT1G70280 AOAT2 LPA3 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PETE1 ACR3 AT1G77670 LCR68 ATMEPCT AT2G05920 ATHNIR AT2G17630 PDTPI AtFBA1 CYP79B3 ATMES3 AT2G24060 AT2G25830 AT2G27680 ADT3 RPT2 AT2G30695 AT2G31670 AT2G33180 GDCH SKL2 ADK AT2G37500 PnsL1 AT2G42220 ATLEUD1 FAB2 AT2G44040 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 AtCGS1 AK3 ATMS2 EMB3119 AT3G07270 ADK1 OMR1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G14390 ECT6 AT3G19030 AT3G19480 BCAT4 ATSAHH2 AT3G23940 ATPRX AT3G26450 ATCM1 GSA2 AT3G51140 ATG4 FTSZ2-2 AT3G54400 ATDFD SBPASE NAGK IPMI1 GUN4 AT3G59890 AT3G60750 ARATH;BSAS3;1 CYP20-3 AtcpRRF EMB3126 TROL APR ATPC1 ATMSRB5 CYP83A1 AtCLA1 AK-HSDH AT4G23670 ATRBP31 AT4G24830 FAD6 ATH1 AtGLDP1 AGD2 EDA9 ATSERAT3;2 MCA1 ROC1 AtFBA2 AT4G39040 ATIPS1 SIR HEMC AtPPa6 PMDH2 AT5G10920 ATCYP20-2 AT5G13140 CARAB-AK-LYS ATIMD1 AT-P5C1 PCB2 AGP25 ATCPN21 AT5G21060 AT5G22340 IMS3 IMS2 CaS ATGSL1 AT5G41760 AT5G46580 TET1 AT5G51110 APO2 CLB4 ATMYB34 PDCB1 DXR GSA1 ASN2
GO:1901605 alpha-amino acid metabolic process	BP	1.862e-41	POR LIP2 EMB2784 ADT6 AT1G09310 ADT1 ATGLX1 AT1G11860 ATSRS AT1G12800 AT1G15710 CP24 ATSOT17 DRT112 AOR PSAK ATIMD3 AK-HSDH AT-IE PRK AT1G32470 ABCI7 AT1G33110 SHM7 GAPB ATCAO CP22 bHLH115 AT1G51110 PSAH-2 ABA2 AtTLP18.3 AT1G55260 AGP21 AT1G55360 AT1G56190 ATATP-PRT1 AT1G60000 ACO2 FMO ISPF FMO ATGSR2 AT1G66430 PSBY AT1G68260 CER6 AT1G70280 AOAT2 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PETE1 ACR3 AT1G77670 ATGSTU20 LCR68 ATMEPCT AT2G05920 ATHNIR AT2G17630 AAS PDTPI AtFBA1 CYP79B3 ATMES3 AT2G24580 AtGLDP2 AT2G27680 ADT3 RPT2 AT2G31670 GDCH SKL2 ATPAL1 AT2G37500 PnsL1 AT2G42220 ATLEUD1 FAB2 AT2G44040 CHL-CPN10 DHDPS2 ATCB5-C AtCGS1 AK3 ATMS2 EMB3119 AT3G07270 ADK1 OMR1 PAL4 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G14390 HEME1 ECT6 MAT4 AT3G19030 AT3G19480 BCAT4 ATSAHH2 ATPRX AT3G26450 GSA2 ATG4 FTSZ2-2 ATPAL2 AT3G54400 ATDFD SBPASE NAGK IPMI1 GUN4 AT3G59890 MTHFR1 AT3G60750 ARATH;BSAS3;1 CYP20-3 TROL APR ATPC1 ATMSRB5 ARGAH2 CYP83A1 SHM4 CYP74B2 AtCLA1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G18460 AK-HSDH AT4G23670 AT4G24830 FAD6 ATH1 AtGLDP1 AGD2 EDA9 ATSERAT3;2 MCA1 SHM1 ROC1 AtFBA2 ATIPS1 AKN2 ATPAL3 SIR HEMC AtPPa6 PMDH2 AT5G10920 DiT1 ATCYP20-2 AT5G13140 CARAB-AK-LYS ATIMD1 AT-P5C1 PCB2 AGP25 AT5G19240 ATCPN21 AT5G21060 IMS3 IMS2 CaS SHM2 ATGSL1 UPM1 AT5G41760 TET1 PYL1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. CLB4 ATMYB34 PDCB1 DXR GSA1 DCT ASN2
GO:0016143 S-glycoside metabolic process	BP	6.413e-41	AtBE2 POR ATNRT1 CYP79F2 BUS1 AtHBP1 ATSOT17 LHCA2*1 ATLFNR2 AK-HSDH AT1G51340 ABCD2 AtTLP18.3 FMO FMO AT1G65230 FMO ATSOT18 AT1G77090 AIR3 AKN1 AtFBA1 CYP79B3 BASS2 AT2G27680 PY ATFC-II AT2G31670 AT2G31790 AT2G35260 UMAMIT12 ATCAX1 ATLEUD1 ATHOL1 ATCB5-C ATF1 VTC4 ATGSTF11 ATSFR2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 ESM1 MFP1 NDF4 BCAT4 PLSP1 ATPRX DEG1 UMAMIT47 PTAC16 AT3G50685 OEC33 ATGRXCP SBPASE AT3G56010 IPMI1 ARATH;BSAS3;1 APG1 AOP APR APX4 ATPD BASS5 CYP83A1 AT4G13840 CH-42 ATRP1 AT4G24930 AtENODL2 AT4G30020 PDE334 ATHDA14 AtGGPPS11 XTH7 AtFBA2 ATIPS1 AKN2 AT4G39970 SQD2 SBE2.2 SIR 2-Cys ATMYB29 AtPPa6 ATIMD1 IMS3 IMS2 AT5G38520 DEG8 CHL PYL1 ADG1 ATPGMP AtPLR1 APO2 NPL1 AT5G58330 CLB4 ATMYB34 AtMYB28 DXR ATLFNR1
GO:0019757 glycosinolate metabolic process	BP	6.413e-41	AtBE2 POR ATNRT1 CYP79F2 BUS1 AtHBP1 ATSOT17 LHCA2*1 ATLFNR2 AK-HSDH AT1G51340 ABCD2 AtTLP18.3 FMO FMO AT1G65230 FMO ATSOT18 AT1G77090 AIR3 AKN1 AtFBA1 CYP79B3 BASS2 AT2G27680 PY ATFC-II AT2G31670 AT2G31790 AT2G35260 UMAMIT12 ATCAX1 ATLEUD1 ATHOL1 ATCB5-C ATF1 VTC4 ATGSTF11 ATSFR2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 ESM1 MFP1 NDF4 BCAT4 PLSP1 ATPRX DEG1 UMAMIT47 PTAC16 AT3G50685 OEC33 ATGRXCP SBPASE AT3G56010 IPMI1 ARATH;BSAS3;1 APG1 AOP APR APX4 ATPD BASS5 CYP83A1 AT4G13840 CH-42 ATRP1 AT4G24930 AtENODL2 AT4G30020 PDE334 ATHDA14 AtGGPPS11 XTH7 AtFBA2 ATIPS1 AKN2 AT4G39970 SQD2 SBE2.2 SIR 2-Cys ATMYB29 AtPPa6 ATIMD1 IMS3 IMS2 AT5G38520 DEG8 CHL PYL1 ADG1 ATPGMP AtPLR1 APO2 NPL1 AT5G58330 CLB4 ATMYB34 AtMYB28 DXR ATLFNR1
GO:0019760 glucosinolate metabolic process	BP	6.413e-41	AtBE2 POR ATNRT1 CYP79F2 BUS1 AtHBP1 ATSOT17 LHCA2*1 ATLFNR2 AK-HSDH AT1G51340 ABCD2 AtTLP18.3 FMO FMO AT1G65230 FMO ATSOT18 AT1G77090 AIR3 AKN1 AtFBA1 CYP79B3 BASS2 AT2G27680 PY ATFC-II AT2G31670 AT2G31790 AT2G35260 UMAMIT12 ATCAX1 ATLEUD1 ATHOL1 ATCB5-C ATF1 VTC4 ATGSTF11 ATSFR2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 ESM1 MFP1 NDF4 BCAT4 PLSP1 ATPRX DEG1 UMAMIT47 PTAC16 AT3G50685 OEC33 ATGRXCP SBPASE AT3G56010 IPMI1 ARATH;BSAS3;1 APG1 AOP APR APX4 ATPD BASS5 CYP83A1 AT4G13840 CH-42 ATRP1 AT4G24930 AtENODL2 AT4G30020 PDE334 ATHDA14 AtGGPPS11 XTH7 AtFBA2 ATIPS1 AKN2 AT4G39970 SQD2 SBE2.2 SIR 2-Cys ATMYB29 AtPPa6 ATIMD1 IMS3 IMS2 AT5G38520 DEG8 CHL PYL1 ADG1 ATPGMP AtPLR1 APO2 NPL1 AT5G58330 CLB4 ATMYB34 AtMYB28 DXR ATLFNR1
GO:0010207 photosystem II assembly	BP	1.667e-40	LPA1 POR AT1G05140 emb2394 LPA19 CRB ATSRS GAPA-2 AT1G14270 AT1G14345 NDF1 HCF173 ATLFNR2 AT1G29700 PRK AT1G32470 ABCI7 RPL21C GAPB CP22 Lhca5 AT1G52220 PSAH-2 AtTLP18.3 CCB4 ABC4 ATFD2 ATSCO1 AT1G63610 PSBY LPA3 emb2184 LQY1 APG2 PSB29 AtFBA1 AT2G21530 AT2G26500 PBCP AT2G30695 ARASP DAL GDCH SKL2 PnsL1 AT2G43560 AT2G43945 PSAP ATCYP38 HCF107 DAC PSBTN PLSP1 GAPA CCB1 AT3G47650 OEC33 HCEF1 PPL1 SBPASE GUN4 CDS5 AT3G61870 CSP41A TROL PETC ATPC1 ATPD LIL3:1 PAM68 PSBQ AT4G22830 PGR5-LIKE ACP4 PSB28 PDE334 SEP1 HCF244 AtFBA2 SAMC1 OHP AT5G08400 PMDH2 EMB3136 ENH1 ATOEP80 CRR42 CaS HCF136 ATSIG5 AT5G27560 AMOS1 AT5G38520 APE1 CRR7 ARC6 AT5G51110 AT5G52780 NPL1 NdhN AT5G58330 ATLFNR1
GO:0009250 glucan biosynthetic process	BP	6.488e-40	ATCSLD5 AtBE2 POR ATSS3 AT1G12800 LSMT-L NDF6 AT1G22630 Cpn60beta4 IMPL1 AK-HSDH CYP97A3 GBSS1 Aty2 CP22 AT1G49380 ABCD2 AT1G56190 AT1G56500 ATSCO1 AT1G62780 REB1 AT1G65230 AT1G68600 PGM2 AT1G73600 AT1G76450 AT1G77090 ATGSTU20 APG2 AtFBA1 AT2G21530 BASS2 AGO4 PY ATFC-II BAM6 ATCSLB03 ATCSLB04 NHL12 AT2G36145 NTRC PHR2 PnsL3 LSF1 AT3G01660 ATF1 ATGSTF11 AtUGP1 ATSFR2 AT3G07670 AT3G09050 LSF2 PGK1 ESM1 MFP1 NDF4 EMB2083 DAC EMB1270 ABCI12 AT3G22210 HCF101 AT3G28760 AT3G48200 AT3G48420 FTSZ2-2 HCEF1 PDE329 SBPASE AT3G56010 AT3G59780 BAM2 EMB3129 ATPC1 APX4 ATPD AT4G10300 CYP83A1 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G20760 ATRP1 PGR5-LIKE ATCSLG3 AT4G27700 AT4G30020 PGR3 AtGLDP1 ATHDA14 AT4G33500 AtFBA2 APL3 TBL3 ATPDX1 AT5G02940 SBE2.2 AGAL2 CESA5 PPD5 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. ATGSL12 BAM9 ADG2 CaS ATSS1 AT5G27560 AT5G28500 atylmg3 APE1 CRR7 DEG8 ADG1 CP31B ATPGMP AtPLR1 AT5G55220 APO2 NPL1 NdhN AT5G58330 CLB4 ATGT18 DXR
GO:0016053 organic acid biosynthetic process	BP	7.154e-40	KCS1 POR KCS2 LIP2 EMB2784 KCS3 ADT6 AT1G09310 CRB ATFD1 ADT1 ATGLX1 AT1G11860 ATSRS AT1G12800 LSMT-L ATGA3OX1 AT1G15710 CP24 ATSOT17 JMT ATLFNR2 DRT112 AOR PSAK ATIMD3 AK-HSDH CYP97A3 AT-IE PRK ACT1 AT1G32470 ABCI7 FdC2 AT1G33110 GAPB ATCAO CP22 LACS2 bHLH115 AT1G51110 PSAH-2 ABA2 AtTLP18.3 AT1G55260 AGP21 AT1G55360 AT1G56190 ATNAS4 ATATP-PRT1 AT1G60000 ACO2 FMO ISPF BDG1 ATGSR2 AT1G66430 PSBY AT1G68240 AT1G68260 CER6 AT1G70280 AOAT2 LPA3 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PETE1 ACR3 LACS9 AT1G77670 ATGSTU20 LCR68 ATMEPCT AT2G05920 ATHNIR KCS9 AT2G17630 PDTPI AtFBA1 CYP79B3 ATMES3 AT2G24060 ATWRKY60 AT2G25830 FDH AT2G27680 ADT3 ANTR1 AtFAD3 RPT2 AT2G30695 AT2G31670 AT2G33180 GDCH SKL2 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ADK AT2G37500 AT2G37660 PnsL1 RCA AT2G42220 ATLEUD1 FAB2 AT2G44040 CHL-CPN10 AT2G44920 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 ATCB5-C AtCGS1 ATCYP38 ATBCA1 AK3 VTC4 RGL2 ATMS2 EMB3119 AT3G07270 ATERDJ3A ADK1 OMR1 AtFAD7 ATBSMT1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G14390 HEME1 ADS3 ECT6 AT3G19030 AT3G19480 BCAT4 ATSAHH2 AT3G23940 ATPRX AT3G26450 ATCM1 AAO2 GSA2 AT3G51140 ATG4 FTSZ2-2 CYP97C1 AT3G54400 ATDFD SBPASE NAGK IPMI1 GUN4 AT3G59890 AT3G60750 ARATH;BSAS3;1 CYP20-3 AtcpRRF EMB3126 TROL AT4G02530 PETC APR ATPC1 ATMSRB5 ATPD CYP83A1 CYP74B2 AtCLA1 CH-42 AK-HSDH AT4G23670 TAR2 ATRBP31 AT4G24830 ACP4 B1 VTC2 FAD4 FAD6 PDE334 ATH1 AtGLDP1 AGD2 EDA9 ATSERAT3;2 MCA1 SHM1 ROC1 AtFBA2 AT4G39040 ATIPS1 AKN2 SQD2 AtHsp70-2 FD-GOGAT SIR ATNAS1 AtFAD8 2-Cys ERL2 HEMC AtPPa6 PMDH2 AT5G10920 ATCYP20-2 AT5G13140 CARAB-AK-LYS ATIMD1 AT-P5C1 PSY PCB2 AGP25 AT5G19240 ATCPN21 AT5G21060 AT5G22340 IMS3 IMS2 CaS ATGSL1 AT5G41760 KCS20 ATFKBP13 AT5G46580 TET1 PYL1 CP31B AT5G51110 AT5G51310 B2 ANK APO2 CLB4 ATMYB34 PDCB1 DXR Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. GSA1 ASN2 ATLFNR1 ABA1 EPS1
GO:0046394 carboxylic acid biosynthetic process	BP	7.154e-40	KCS1 POR KCS2 LIP2 EMB2784 KCS3 ADT6 AT1G09310 CRB ATFD1 ADT1 ATGLX1 AT1G11860 ATSRS AT1G12800 LSMT-L ATGA3OX1 AT1G15710 CP24 ATSOT17 JMT ATLFNR2 DRT112 AOR PSAK ATIMD3 AK-HSDH CYP97A3 AT-IE PRK ACT1 AT1G32470 ABCI7 FdC2 AT1G33110 GAPB ATCAO CP22 LACS2 bHLH115 AT1G51110 PSAH-2 ABA2 AtTLP18.3 AT1G55260 AGP21 AT1G55360 AT1G56190 ATNAS4 ATATP-PRT1 AT1G60000 ACO2 FMO ISPF BDG1 ATGSR2 AT1G66430 PSBY AT1G68240 AT1G68260 CER6 AT1G70280 AOAT2 LPA3 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PETE1 ACR3 LACS9 AT1G77670 ATGSTU20 LCR68 ATMEPCT AT2G05920 ATHNIR KCS9 AT2G17630 PDTPI AtFBA1 CYP79B3 ATMES3 AT2G24060 ATWRKY60 AT2G25830 FDH AT2G27680 ADT3 ANTR1 AtFAD3 RPT2 AT2G30695 AT2G31670 AT2G33180 GDCH SKL2 Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ADK AT2G37500 AT2G37660 PnsL1 RCA AT2G42220 ATLEUD1 FAB2 AT2G44040 CHL-CPN10 AT2G44920 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis DHDPS2 ATCB5-C AtCGS1 ATCYP38 ATBCA1 AK3 VTC4 RGL2 ATMS2 EMB3119 AT3G07270 ATERDJ3A ADK1 OMR1 AtFAD7 ATBSMT1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G12930 AT3G14390 HEME1 ADS3 ECT6 AT3G19030 AT3G19480 BCAT4 ATSAHH2 AT3G23940 ATPRX AT3G26450 ATCM1 AAO2 GSA2 AT3G51140 ATG4 FTSZ2-2 CYP97C1 AT3G54400 ATDFD SBPASE NAGK IPMI1 GUN4 AT3G59890 AT3G60750 ARATH;BSAS3;1 CYP20-3 AtcpRRF EMB3126 TROL AT4G02530 PETC APR ATPC1 ATMSRB5 ATPD CYP83A1 CYP74B2 AtCLA1 CH-42 AK-HSDH AT4G23670 TAR2 ATRBP31 AT4G24830 ACP4 B1 VTC2 FAD4 FAD6 PDE334 ATH1 AtGLDP1 AGD2 EDA9 ATSERAT3;2 MCA1 SHM1 ROC1 AtFBA2 AT4G39040 ATIPS1 AKN2 SQD2 AtHsp70-2 FD-GOGAT SIR ATNAS1 AtFAD8 2-Cys ERL2 HEMC AtPPa6 PMDH2 AT5G10920 ATCYP20-2 AT5G13140 CARAB-AK-LYS ATIMD1 AT-P5C1 PSY PCB2 AGP25 AT5G19240 ATCPN21 AT5G21060 AT5G22340 IMS3 IMS2 CaS ATGSL1 AT5G41760 KCS20 ATFKBP13 AT5G46580 TET1 PYL1 CP31B AT5G51110 AT5G51310 B2 ANK APO2 CLB4 ATMYB34 PDCB1 DXR Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. GSA1 ASN2 ATLFNR1 ABA1 EPS1
GO:0005976 polysaccharide metabolic process	BP	2.957e-39	ATGPAT4 ATCSLD5 AtBE2 POR AT1G04040 AT1G04680 AT1G09440 iPGAM1 ATPMEPCRA ATSS3 ATNRT1 AT1G12500 AT1G12800 LSMT-L NDF6 DRT112 AT1G22630 AT1G23410 Cpn60beta4 IMPL1 AK-HSDH CYP97A3 ATPRR1 GBSS1 AtGXMT1 Aty2 CP22 AT1G49380 ATMUM4 ABCD2 AT1G54790 AT1G56190 AT1G56500 ATXYN1 ARP2 ATSCO1 AT1G62780 REB1 AT1G65230 AT1G66180 CER6 AT1G68600 AXY4 PG2 AT1G70550 PGM2 ATPIN3 ANAC030 AT1G73600 AtGH9B7 AMY2 AT1G76450 AT1G77090 ATGSTU20 APG2 ATPIN4 LCR68 AtFBA1 AT2G21530 BASS2 AGO4 PY ATFC-II BAM6 ATCSLB03 ATCSLB04 GALS1 NHL12 AT2G36145 AT2G37660 TBL34 NTRC PHR2 PnsL3 LSF1 AT3G01660 AT3G01810 ATF1 ATGSTF11 AtUGP1 ATSFR2 AT3G07670 AT3G08600 AT3G09050 PAL4 LSF2 PGK1 ESM1 MFP1 NDF4 EMB2083 AT3G16370 DAC EMB1270 ABCI12 AT3G22210 AT3G23090 XTH16 HCF101 AFH1 AT3G27200 AT3G28760 AT3G48200 AT3G48420 BAM2 FTSZ2-2 AT3G52900 HCEF1 PDE329 SBPASE AT3G56010 AT3G56230 AT3G56370 AT3G59780 AT3G60750 BAM2 EMB3129 ATPC1 APX4 ATPD AT4G10300 CYP83A1 AT4G14360 ATOPT3 AtBAM3 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G20760 ATRP1 sks4 PGR5-LIKE ATCSLG3 AT4G27700 AT4G30020 AHA2 PGR3 ATCBL10 AtGLDP1 ATHDA14 AT4G33500 ATCAP1 CAT2 XCP1 XTH7 AtFBA2 APL3 LAC10 TBL3 ATPDX1 AT5G01590 AT5G02940 LAC11 SBE2.2 AGAL2 CESA5 PPD5 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. DiT1 ATGSL12 AT5G13140 AtENODL17 GAUT14 AtMYB43 BAM9 AGP25 ADG2 CaS ATSS1 AT5G26330 AT5G27560 AT5G28500 atylmg3 APE1 CRR7 DEG8 ADG1 AT5G48740 CP31B ATPGMP AtPLR1 AT5G55220 GDPDL4 APO2 NPL1 NdhN AT5G58330 ATLAC17 CLB4 ATGT18 DXR BAM1 XTH6
GO:0019748 secondary metabolic process	BP	3.841e-39	KCS1 AtBE2 POR KCS2 LIP2 UGT1 similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase ATGSTU18 ATGSTU17 ATNRT1 CYP79F2 BUS1 AtHBP1 ATSOT17 LHCA2*1 ATLFNR2 AOR AK-HSDH ATPRR1 NRT1.5 AtGXMT1 AT1G51340 4CL.1 ABA2 ATGSTU28 ABCD2 AtTLP18.3 AT1G55210 AT1G58170 ACO2 FMO FMO BDG1 4CL3 AT1G65230 FMO AT1G65870 ATGSR2 AT1G68440 CER6 ATSOT18 AT1G77090 ATGSTU23 ATGSTU20 AtOCT5 ATMEPCT AIR3 AKN1 AtFBA1 CYP79B3 CYP711A1 BASS2 AT2G27680 PY ATFC-II AT2G31670 AT2G31790 ABCC2 AT2G35260 SKL2 MAT3 ATPAL1 UMAMIT12 ATCAX1 ATLEUD1 FAB2 ATHOL1 ATCB5-C ATF1 VTC4 ATGSTF11 EMB3119 ATSFR2 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AGP12 ESM1 MFP1 NDF4 MAT4 ATCAD4 BCAT4 ATPURC 4CL2 UGT84A2 MED33A ATGR1 PLSP1 ATPRX DEG1 UMAMIT47 ATGSTU27 AT3G46490 PTAC16 DCF ATBCAT-3 AT3G50685 OEC33 ATPAL2 ATGR2 ATGRXCP GSTL2 SBPASE AT3G56010 IPMI1 ARATH;BSAS3;1 CYP20-3 APG1 TROL GT72B1 AOP APR ATPC1 APX4 ATPD BASS5 CYP83A1 AT4G13840 AtCLA1 CH-42 ATRP1 AtDIR6 AT4G24930 AtENODL2 AT4G30020 AT4G30470 FAD6 ATGPX7 PDE334 ATH1 AtGLDP1 ATHDA14 BGAL3 AT4G36640 AtGGPPS11 XTH7 ATMYB4 AtFBA2 ATCAD9 ATIPS1 AKN2 AT4G39970 LAC8 LAC10 SQD2 LAC11 SBE2.2 SIR 2-Cys ATMYB29 AtPPa6 PMDH2 AT5G12110 ATCHS ATIMD1 DHAR3 IMS3 IMS2 AT5G24760 AT5G38520 DEG8 CHL PYL1 ADG1 HCT ATPGMP AtPLR1 ATOMT1 APO2 NPL1 AT5G58330 ATLAC17 CLB4 ATMYB34 AtMYB28 DXR ATLFNR1
GO:0009069 serine family amino acid metabolic proce...	BP	4.932e-39	POR LIP2 EMB2784 AT1G09310 ATGLX1 AT1G11860 ATSRS AT1G12800 CP24 ATSOT17 DRT112 AOR PSAK PRK AT1G32470 AT1G33110 SHM7 GAPB ATCAO CP22 bHLH115 PSAH-2 AtTLP18.3 AT1G55260 AGP21 AT1G55360 AT1G56190 ATATP-PRT1 AT1G60000 ACO2 FMO ISPF AT1G66430 PSBY AT1G68260 CER6 ATSOT18 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. PETE1 ACR3 LCR68 ATMEPCT ATHNIR AT2G17630 PDTPI AtFBA1 CYP79B3 ATMES3 AtGLDP2 AT2G27680 RPT2 AT2G31670 GDCH SKL2 PnsL1 AT2G42220 ATLEUD1 FAB2 EMB3119 ADK1 Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. PGK1 AT3G19030 AT3G19480 BCAT4 ATSAHH2 ATPRX AT3G26450 GSA2 ATG4 FTSZ2-2 AT3G54400 SBPASE GUN4 AT3G60750 ARATH;BSAS3;1 CYP20-3 TROL APR ATPC1 ATMSRB5 CYP83A1 SHM4 AtCLA1 AT4G23670 FAD6 ATH1 AtGLDP1 EDA9 ATSERAT3;2 MCA1 SHM1 ROC1 AtFBA2 SIR HEMC AtPPa6 PMDH2 ATCYP20-2 AT5G13140 PCB2 AGP25 ATCPN21 IMS3 IMS2 CaS SHM2 ATGSL1 TET1 CLB4 PDCB1 DXR GSA1 ASN2
GO:0044262 cellular carbohydrate metabolic process	BP	1.597e-38	ATCSLD5 AtBE2 POR AT1G04040 AT1G09390 AT1G09440 iPGAM1 AT1G10740 ATPMEPCRA ATSS3 ATNRT1 AT1G12500 AT1G12800 LSMT-L NDF6 AT1G22630 AT1G23410 Cpn60beta4 ARAB-1 IMPL1 AK-HSDH CYP97A3 ATPRR1 GBSS1 AtGXMT1 Aty2 CP22 AT1G49380 mMDH1 ATMUM4 ABCD2 AT1G54790 AT1G56190 AT1G56500 ATXYN1 ARP2 ATSCO1 AT1G62780 REB1 AT1G65230 AT1G66180 AT1G66430 GDPDL1 AT1G68600 AXY4 PG2 AT1G70550 PGM2 AtGDPD4 ANAC030 AT1G73600 AtGH9B7 AMY2 AT1G76450 AT1G77090 ATGSTU20 APG2 AKN1 PDTPI AtFBA1 AT2G21530 ATIPS2 BASS2 AGO4 AT2G27360 PY ATFC-II CVL1 BAM6 ATCSLB03 ATCSLB04 AT2G35840 NHL12 AT2G36145 AT2G37660 TBL34 NTRC PHR2 PnsL3 LSF1 AT3G01660 AT3G01810 ATF1 VTC4 ATGSTF11 AtUGP1 ATSFR2 AT3G07670 AT3G08600 AT3G09050 PAL4 LSF2 PGK1 ESM1 mMDH2 MFP1 NDF4 EMB2083 AAE7 DAC EMB1270 ABCI12 AT3G22210 AT3G23090 XTH16 HCF101 AT3G27200 AT3G28760 AT3G48200 AT3G48420 AT3G48460 ATSPP2 FTSZ2-2 AT3G52900 HCEF1 PDE329 SBPASE AT3G56010 AT3G56230 AT3G56370 AT3G59780 AT3G60750 BAM2 EMB3129 ATPC1 APX4 ATPD ATSPS4F AT4G10300 CYP83A1 AtBAM3 encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. AT4G20760 ATRP1 PGR5-LIKE ATCSLG3 AT4G27700 AT4G30020 AHA2 PGR3 AtGLDP1 ATHDA14 AT4G33500 CAT2 XCP1 BGAL3 XTH7 AtFBA2 APL3 ATIPS1 AKN2 LAC10 TBL3 ATPDX1 AT5G01590 AT5G02940 LAC11 SBE2.2 ATMYB29 AtGDPD6 AGAL2 PMDH2 CESA5 ATMIPS3 PPD5 Encodes a protein with similarity to REN1, a Rho GTPase activating protein. DiT1 ATGSL12 AtENODL17 GAUT14 AtMYB43 BAM9 AGP25 ADG2 CaS ATSS1 AT5G26330 MK AT5G27560 AT5G28500 atylmg3 APE1 CRR7 DEG8 ADG1 AT5G48740 CP31B ATTPPA ATPGMP AtPLR1 AT5G55220 GDPDL4 APO2 NPL1 NdhN AT5G58330 ATLAC17 CLB4 AtMYB28 ATGT18 DXR XTH6
GO:0015994 chlorophyll metabolic process	BP	2.212e-38	POR encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase LIP2 CRB AT1G12800 NDF6 ATCLH1 AOR CYP97A3 ACT1 PRPL11 GAPB ATCAO AtTLP18.3 AtHEMA1 AT1G62250 ISPF CER6 STN7 ABCB26 AT1G71480 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. emb2184 AT1G76450 ATMEPCT Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AtFBA1 ATIPS2 AT2G27680 EDA3 AT2G35410 SKL2 AT2G35760 AT2G37660 AT2G40400 HEME2 NTRC FAB2 AT2G44920 ATCYP38 AT3G13120 PRPS20 ADS3 ELIP HCF101 ATPRX DEG1 PTAC16 GSA2 ATG4 CYP97C1 HCEF1 AT3G56680 GUN4 AT3G61080 AT3G61870 CYP20-3 CSP41A TROL AT4G02530 ATPC1 APX4 ATPD AtCLA1 LIL3:1 CH-42 CHLM FAD6 ACDO1 ATSDX1 ATH1 AtGLDP1 SEP1 AtFBA2 SQD2 ATPDX1 AT5G08050 HEMC AT5G08650 PMDH2 ABAR PSY PCB2 CaS HCF136 ARRPS1 AT5G35970 AT5G43150 ATFKBP13 CHL AT5G52970 CLB4 DXR GSA1
GO:0006778 porphyrin-containing compound metabolic ...	BP	5.964e-38	POR encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase LIP2 CRB AT1G12800 AT1G18440 NDF6 ATCLH1 AOR CYP97A3 ACT1 PRPL11 GAPB ATCAO AtTLP18.3 AT1G56050 AtHEMA1 AT1G62250 ISPF CER6 STN7 ABCB26 AT1G71480 Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. emb2184 AT1G76450 ATMEPCT Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. AtFBA1 ATIPS2 ATCDPMEK AT2G27680 ATFC-II EDA3 AT2G35410 SKL2 AT2G35760 AT2G37660 AT2G40400 HEME2 NTRC FAB2 AT2G44920 ATCYP38 AT3G13120 HEME1 PRPS20 ADS3 GluTRBP ELIP HCF101 ATPRX DEG1 PTAC16 GSA2 ATG4 CYP97C1 HCEF1 AT3G56680 GUN4 AT3G61080 AT3G61870 CYP20-3 APG3 CSP41A TROL HEMG1 AT4G02530 ATPC1 APX4 ATPD AtCLA1 LIL3:1 CH-42 CHLM FAD6 ACDO1 ATSDX1 ATH1 AtGLDP1 SEP1 AtFBA2 SQD2 ATPDX1 AT5G08050 HEMC AT5G08650 PMDH2 ABAR PSY PCB2 CaS HCF136 ARRPS1 AT5G35970 UPM1 AT5G43150 ATFKBP13 CHL AT5G52970 CLB4 DXR GSA1