GOID	TERM	ONTOLOGY	pValue	Genes
GO:0006354	DNA-templated transcription, elongation	BP	1.03148164382563e-06	NDHE//RPS15//RPS12//RPL20//PSBT//PSBN//RPOA//ATPI//RPOC2//RPOB//YCF3//NDHJ//AT4G37660
GO:0042180	cellular ketone metabolic process	BP	0.000104156495872299	NDHE//ALX8//ATCHS//PGPS2//ABA2//CAD1//AJH2//ATSK1//ATBCA4//GPPS
GO:0010565	regulation of cellular ketone metabolic ...	BP	0.0024105082268155	ALX8//ABA2//CAD1//AJH2
GO:0015979	photosynthesis	BP	0.00250651944654119	NDHE//RPS15//RPS12//RPL20//PSBT//PSBN//RPOA//ATPI//RPOC2//RPOB//YCF3//NDHJ//NAD5//PDE343
GO:0042181	ketone biosynthetic process	BP	0.00391713194142385	NDHE//ATCHS//ATSK1//GPPS
GO:0010017	red or far-red light signaling pathway	BP	0.0052141658991984	HY5//PAP3//AtHBP2//ELF4
GO:0006743	ubiquinone metabolic process	BP	0.00659292820207351	NDHE//ATSK1//GPPS
GO:0006744	ubiquinone biosynthetic process	BP	0.00659292820207351	NDHE//ATSK1//GPPS
GO:0071214	cellular response to abiotic stimulus	BP	0.00672395926950479	HY5//AtSAP10//AtOCT4//PAP3//AtHBP2//ANTR1//ELF4
GO:0071489	cellular response to red or far red ligh...	BP	0.00677100250284907	HY5//PAP3//AtHBP2//ELF4
GO:0044255	cellular lipid metabolic process	BP	0.00695651284767036	NDHE//AT5G21100//AAO2//ATPCME//AtPNC2//ALX8//AT5G57815//SDHAF2//OVA2//AT3G59710//PGPS2//IM//SMAP1//AT4G01610//AtOCT4//ABA2//AT1G12800//3BETAHSD/D1//ATGA3OX1//KNAT6//PES1//CVL1//ATKAO2//GPPS//DVL11
GO:0044281	small molecule metabolic process	BP	0.00872406733413399	NDHE//ATPI//AT5G21100//AAO2//ATPCME//AtPNC2//AT5G25770//ANNAT2//ALX8//AT5G59240//FTSH11//SDHAF2//OVA2//AtTK1b//ATCHS//AT3G59710//ATDFD//PGPS2//ACS9//ATSK2//ATXT2//AT4G01610//CIPK11//AT3G12320//AtOCT4//AT3G22210//NAD5//AT3G06530//ATCYSD1//ABA2//CAD1//AJH2//AT1G52930//ATSOT16//UGT74F1//AT1G12800//3BETAHSD/D1//ATGA3OX1//BZO1//ABCF3//AT1G42440//KNAT6//GRP3S//ATSK1//PES1//ATBCA4//AtOPR3//AT2G25450//CVL1//ATKAO2//ANTR1//AtCCA1//GPPS//DVL11//ATPDI9
GO:0006412	translation	BP	0.011608615390032	RPS15//RPS12//RPL20//AT5G09510//AT5G59240//OVA2//AT5G03850//ACS9//ATBBC1//AT4G37660//AFC2//AT1G18070//AT3G28900//AT1G56350//RPL16A//AT2G01250
GO:0044282	small molecule catabolic process	BP	0.0121438479129636	NDHE//ATPCME//AtPNC2//SDHAF2//PGPS2//AT4G01610//AtOCT4//ATSOT16//KNAT6//ATBCA4//AtOPR3//CVL1//DVL11
GO:0045036	protein targeting to chloroplast	BP	0.0159736573989022	CIA2//cpHsc70-1//AT1G33870//PDE343
GO:0072596	establishment of protein localization to...	BP	0.0159736573989022	CIA2//cpHsc70-1//AT1G33870//PDE343
GO:0072598	protein localization to chloroplast	BP	0.0159736573989022	CIA2//cpHsc70-1//AT1G33870//PDE343
GO:0009062	fatty acid catabolic process	BP	0.0166806035717588	ATPCME//AtPNC2//SDHAF2//AT4G01610//AtOCT4//KNAT6//DVL11
GO:0031537	regulation of anthocyanin metabolic proc...	BP	0.0171490939589019	ATCHS//HY5//PAP3
GO:0042752	regulation of circadian rhythm	BP	0.0171490939589019	HY5//AtCCA1//ELF4
GO:0046482	para-aminobenzoic acid metabolic process	BP	0.0171490939589019	AT5G25770//AtOCT4//UGT74F1
GO:0006091	generation of precursor metabolites and ...	BP	0.0172324765512818	NDHE//RPS15//RPS12//RPL20//PSBT//PSBN//RPOA//ATPI//RPOC2//RPOB//YCF3//NDHJ//AtTK1b//NAD5//ABCF3//PDE343
GO:0035670	plant-type ovary development	BP	0.0180534771591186	RXF26//ALX8//OVA2//MEE40//cpHsc70-1//Cpn60beta2
GO:0048481	ovule development	BP	0.0180534771591186	RXF26//ALX8//OVA2//MEE40//cpHsc70-1//Cpn60beta2
GO:0015931	nucleobase-containing compound transport	BP	0.0201858943229786	AAP3//AtPNC2//HY5//AT5G03850//AAC1//ABCF3
GO:0072329	monocarboxylic acid catabolic process	BP	0.0202704016760369	ATPCME//AtPNC2//SDHAF2//AT4G01610//AtOCT4//KNAT6//DVL11
GO:1901360	organic cyclic compound metabolic proces...	BP	0.0207743954902543	NDHE//RPS15//RPS12//RPL20//PSBT//PSBN//RPOA//ATPI//RPOC2//RPOB//YCF3//NDHJ//CRR4//AT5G09510//AT5G21100//AT4G36640//BBM//AtPNC2//AT5G25770//KNAT3//ANNAT2//ALX8//AT5G59240//CIA2//BBX29//OVA2//AT5G46910//NRPC2//TOM20-4//AT5G23690//AtTK1b//ATCHS//anac084//HY5//OBF5//AT3G56330//ATDFD//ATBBC1//AT3G46210//ATSK2//AT4G37660//AT4G29360//ATSUMO1//AT4G24790//AFC2//IM//AT4G03090//AT3G12440//AtOCT4//AT3G22210//AT3G28900//NAD5//AT1G80850//DEL3//AT3G06530//emb1974//ATRAB18C//AT3G03130//LGO//AT1G28100//AT1G55210//ABA2//CAD1//AJH2//AT1G52930//APG13//ATSOT16//UGT74F1//RIP4//AT1G45110//AT1G12800//3BETAHSD/D1//AtTLP8//AT1G15940//PDE343//AT1G42440//AT1G10780//KNAT6//GRP3S//RPL16A//PAP3//AT1G61410//AtOPR3//AT2G32070//ATHAM1//ANTR1//AtCCA1
GO:0044249	cellular biosynthetic process	BP	0.0219301940475861	NDHE//RPS15//RPS12//RPL20//PSBT//PSBN//RPOA//ATPI//RPOC2//RPOB//YCF3//NDHJ//AT5G09510//AT5G21100//AT5G19480//AT4G36640//AAO2//BBM//AtPNC2//KNAT3//ALX8//AT5G59240//AT5G57815//CIA2//BBX29//FTSH11//OVA2//AT5G46910//NRPC2//AtTK1b//ATCHS//anac084//HY5//AT5G03850//AT3G61920//ATDFD//PGPS2//ACS9//ATBBC1//ATSK2//AT4G37660//AT4G29360//ATSUMO1//AT4G24790//AFC2//IM//SMAP1//AT4G03090//ATXT2//CIPK11//AT1G18070//AT3G22210//AT3G28900//DEL3//AT3G06530//emb1974//ATRAB18C//AAC1//AT3G03130//LGO//ATCYSD1//AT1G28100//AT1G56350//AT1G55210//ABA2//AJH2//AT1G52930//APG13//ATSOT16//RIP4//AT1G45110//AT1G12800//3BETAHSD/D1//ATGA3OX1//AtTLP8//AT1G15940//BZO1//PDE343//AT1G42440//AT1G10780//KNAT6//GRP3S//ATSK1//RPL16A//PES1//OTS1//PAP3//AtOPR3//AT2G25450//AT2G32070//AT2G01250//AtHBP2//ATHAM1//ATKAO2//ANTR1//ATSPP//AtCCA1//GPPS
GO:0006721	terpenoid metabolic process	BP	0.0227580431576944	AAO2//OVA2//IM//ABA2//AT1G12800//3BETAHSD/D1//ATGA3OX1//PES1//ATKAO2
GO:0032787	monocarboxylic acid metabolic process	BP	0.0236462533515976	NDHE//AAO2//ATPCME//AtPNC2//AT5G25770//ALX8//SDHAF2//AT3G59710//PGPS2//ACS9//ATSK2//AT4G01610//CIPK11//AtOCT4//ABA2//CAD1//ATSOT16//UGT74F1//AT1G12800//ABCF3//KNAT6//GRP3S//ATSK1//ATBCA4//AtOPR3//ANTR1//DVL11
GO:1901661	quinone metabolic process	BP	0.0246274964788744	NDHE//ATSK1//GPPS
GO:1901663	quinone biosynthetic process	BP	0.0246274964788744	NDHE//ATSK1//GPPS
GO:0009072	aromatic amino acid family metabolic pro...	BP	0.0248476011174188	NDHE//AT5G25770//ATSK2//AtOCT4//ATSOT16//UGT74F1//AT1G12800//AtOPR3
GO:0016114	terpenoid biosynthetic process	BP	0.0268684264972929	AAO2//OVA2//IM//ABA2//AT1G12800//3BETAHSD/D1//ATGA3OX1//ATKAO2
GO:0016925	protein sumoylation	BP	0.0273152586415246	ATSUMO1//DVL11
GO:0046890	regulation of lipid biosynthetic process	BP	0.0273152586415246	ALX8//ABA2
GO:1901576	organic substance biosynthetic process	BP	0.0274957495634701	NDHE//RPS15//RPS12//RPL20//PSBT//PSBN//RPOA//ATPI//RPOC2//RPOB//YCF3//NDHJ//AT5G09510//AT5G21100//AT5G19480//AT4G36640//AAO2//BBM//AtPNC2//KNAT3//ANNAT2//ALX8//AT5G59240//AT5G57815//CIA2//BBX29//FTSH11//OVA2//AT5G46910//NRPC2//AtTK1b//ATCHS//anac084//HY5//AT5G03850//AT3G61920//ATDFD//PGPS2//ACS9//ATBBC1//ATSK2//AT4G37660//AT4G29360//ATSUMO1//AT4G24790//AFC2//IM//CCD4//SMAP1//AT4G03090//ATXT2//CIPK11//AT1G18070//AT3G12320//AT3G22210//AT3G28900//DEL3//AT3G06530//emb1974//ATRAB18C//AAC1//AT3G03130//LGO//ATCYSD1//AT1G28100//AT1G56350//AT1G55210//ABA2//AJH2//AT1G52930//APG13//ATSOT16//RIP4//AT1G45110//AT1G12800//3BETAHSD/D1//ATGA3OX1//AtTLP8//AT1G15940//BZO1//ABCF3//PDE343//AT1G42440//AT1G10780//KNAT6//GRP3S//ATSK1//RPL16A//PES1//OTS1//PAP3//AtOPR3//AT2G25450//AT2G32070//AT2G01250//AtHBP2//ATHAM1//ATKAO2//ANTR1//ATSPP//AtCCA1//GPPS
GO:0009668	plastid membrane organization	BP	0.0275934276317634	ALX8//OVA2//MEE40//APG13//AT1G12800//PDE343
GO:0010027	thylakoid membrane organization	BP	0.0275934276317634	ALX8//OVA2//MEE40//APG13//AT1G12800//PDE343
GO:0010467	gene expression	BP	0.0282755936046466	NDHE//RPS15//RPS12//RPL20//PSBT//PSBN//RPOA//ATPI//RPOC2//RPOB//YCF3//NDHJ//AT5G09510//BBM//KNAT3//ALX8//AT5G59240//CIA2//BBX29//OVA2//AT5G46910//NRPC2//TOM20-4//AT5G23690//anac084//HY5//OBF5//AT5G03850//ACS9//ATBBC1//AT3G46210//AT4G37660//AT4G29360//ATSUMO1//AFC2//IM//SMAP1//AT4G03090//AT1G18070//AT3G28900//AT1G80850//DEL3//emb1974//ATRAB18C//AT1G56350//AJH2//APG13//RIP4//AT1G12800//AtTLP8//AT1G15940//ABCF3//PDE343//KNAT6//RPL16A//PAP3//AT2G01250//ATHAM1//AtCCA1
GO:0016054	organic acid catabolic process	BP	0.0286665375274622	NDHE//ATPCME//AtPNC2//SDHAF2//AT4G01610//AtOCT4//ATSOT16//KNAT6//AtOPR3//DVL11
GO:0046395	carboxylic acid catabolic process	BP	0.0286665375274622	NDHE//ATPCME//AtPNC2//SDHAF2//AT4G01610//AtOCT4//ATSOT16//KNAT6//AtOPR3//DVL11
GO:0044242	cellular lipid catabolic process	BP	0.029000982672997	ATPCME//AtPNC2//SDHAF2//AT4G01610//AtOCT4//KNAT6//DVL11
GO:0006629	lipid metabolic process	BP	0.0291719988535683	NDHE//RXF26//AT5G21100//AAO2//ATPCME//AtPNC2//ANNAT2//ALX8//AT5G57815//SDHAF2//OVA2//AT3G59710//PGPS2//IM//SMAP1//AT4G01610//AtOCT4//ABA2//AT1G12800//3BETAHSD/D1//ATGA3OX1//KNAT6//PES1//CVL1//ATKAO2//GPPS//DVL11
GO:0044237	cellular metabolic process	BP	0.030218741545424	NDHE//RPS15//RPS12//RPL20//PSBT//PSBN//RPOA//ATPI//RPOC2//RPOB//YCF3//NDHJ//CRR4//AT5G09510//AT5G21100//AT5G19480//AT4G36640//AAO2//BBM//ATPCME//AtPNC2//AT5G25770//KNAT3//ANNAT2//ALX8//UBC3//AT5G59240//AT5G58950//AT5G57815//CIA2//BBX29//FTSH11//SDHAF2//OVA2//AT5G46910//NRPC2//TOM20-4//AT5G23690//FSD3//AtTK1b//AT5G18610//ATCHS//anac084//HY5//AT5G09800//OBF5//AT5G03850//AT3G61920//AT3G59710//AT3G59730//AT3G56330//ATDFD//PGPS2//ACS9//ATBBC1//AT3G49210//AT3G46210//ATSK2//AT4G37660//CYCB2;2//AT4G34960//AT4G29360//ATSUMO1//AtSAP10//AT4G24790//AFC2//cpHsc70-1//IM//SMAP1//UBI10//AT4G03090//ATXT2//AT4G01610//APS2//CIPK11//AT1G18070//AT3G12440//AT3G12320//AtOCT4//AT3G22210//Cpn60beta2//AT3G28900//NAD5//AT1G80850//DEL3//AT3G06530//emb1974//ATRAB18C//AAC1//AT3G03130//LGO//ATCYSD1//AT1G28100//AT1G56350//AT1G55210//ABA2//CAD1//AJH2//AT1G52930//APG13//ATSOT16//UGT74F1//CPN10//RIP4//AT1G45110//AT1G12800//AT1G28390//3BETAHSD/D1//ATGA3OX1//AtTLP8//AT1G15940//BZO1//ABCF3//ATCUL2//PDE343//AT1G42440//AT1G10780//KNAT6//GRP3S//ATSK1//RPL16A//PES1//OTS1//ATBCA4//AT1G70430//ASK18//PAP3//AT1G61410//AtOPR3//AT2G25450//AT2G32070//CVL1//AT2G01250//AtHBP2//ATHAM1//ATGSTU6//ATKAO2//ATMPK17//ANTR1//ATSPP//AtCCA1//GPPS//DVL11//ATPDI9
GO:0022411	cellular component disassembly	BP	0.0304408284233844	AT1G18070//PYD4//AT1G56350
GO:1901657	glycosyl compound metabolic process	BP	0.0314758692730343	NDHE//ATPI//FTSH11//AtTK1b//ATXT2//NAD5//ATSOT16//BZO1//GRP3S//AT2G25450
GO:0043436	oxoacid metabolic process	BP	0.0333038831896462	NDHE//AAO2//ATPCME//AtPNC2//AT5G25770//ALX8//FTSH11//SDHAF2//OVA2//AT3G59710//ATDFD//PGPS2//ACS9//ATSK2//ATXT2//AT4G01610//CIPK11//AtOCT4//ATCYSD1//ABA2//CAD1//AJH2//ATSOT16//UGT74F1//AT1G12800//ATGA3OX1//BZO1//ABCF3//KNAT6//GRP3S//ATSK1//ATBCA4//AtOPR3//AT2G25450//ATKAO2//ANTR1//DVL11
GO:0015706	nitrate transport	BP	0.033767996669688	AT3G49210//AT4G40080//AtOCT4//ATBCA4//ANTR1
GO:0006082	organic acid metabolic process	BP	0.0341597098185865	NDHE//AAO2//ATPCME//AtPNC2//AT5G25770//ALX8//FTSH11//SDHAF2//OVA2//AT3G59710//ATDFD//PGPS2//ACS9//ATSK2//ATXT2//AT4G01610//CIPK11//AtOCT4//ATCYSD1//ABA2//CAD1//AJH2//ATSOT16//UGT74F1//AT1G12800//ATGA3OX1//BZO1//ABCF3//KNAT6//GRP3S//ATSK1//ATBCA4//AtOPR3//AT2G25450//ATKAO2//ANTR1//DVL11
GO:0016042	lipid catabolic process	BP	0.0341973360245873	ATPCME//AtPNC2//SDHAF2//AT4G01610//AtOCT4//KNAT6//DVL11
GO:0006725	cellular aromatic compound metabolic pro...	BP	0.0347836449638114	NDHE//RPS15//RPS12//RPL20//PSBT//PSBN//RPOA//ATPI//RPOC2//RPOB//YCF3//NDHJ//CRR4//AT5G09510//AT4G36640//BBM//AtPNC2//AT5G25770//KNAT3//ALX8//AT5G59240//CIA2//BBX29//OVA2//AT5G46910//NRPC2//TOM20-4//AT5G23690//AtTK1b//ATCHS//anac084//HY5//OBF5//AT3G56330//ATDFD//ATBBC1//AT3G46210//ATSK2//AT4G37660//AT4G29360//ATSUMO1//AT4G24790//AFC2//IM//AT4G03090//AT3G12440//AtOCT4//AT3G22210//AT3G28900//NAD5//AT1G80850//DEL3//AT3G06530//emb1974//ATRAB18C//AT3G03130//LGO//AT1G28100//AT1G55210//CAD1//AJH2//AT1G52930//APG13//ATSOT16//UGT74F1//RIP4//AT1G45110//AT1G12800//AtTLP8//AT1G15940//PDE343//AT1G42440//AT1G10780//KNAT6//GRP3S//RPL16A//PAP3//AT1G61410//AtOPR3//AT2G32070//ATHAM1//ANTR1//AtCCA1
GO:0071478	cellular response to radiation	BP	0.0351889986251088	HY5//PAP3//AtHBP2//ELF4
GO:0071482	cellular response to light stimulus	BP	0.0351889986251088	HY5//PAP3//AtHBP2//ELF4
GO:0006631	fatty acid metabolic process	BP	0.035516722476862	NDHE//ATPCME//AtPNC2//ALX8//SDHAF2//AT3G59710//AT4G01610//AtOCT4//KNAT6//DVL11
GO:0016144	S-glycoside biosynthetic process	BP	0.0399880110749274	FTSH11//ATXT2//ATSOT16//BZO1//GRP3S//AT2G25450
GO:0019758	glycosinolate biosynthetic process	BP	0.0399880110749274	FTSH11//ATXT2//ATSOT16//BZO1//GRP3S//AT2G25450
GO:0019761	glucosinolate biosynthetic process	BP	0.0399880110749274	FTSH11//ATXT2//ATSOT16//BZO1//GRP3S//AT2G25450
GO:0006862	nucleotide transport	BP	0.0403880273236397	AAP3//AtPNC2//AAC1
GO:0034645	cellular macromolecule biosynthetic proc...	BP	0.0408021669489307	NDHE//RPS15//RPS12//RPL20//PSBT//PSBN//RPOA//ATPI//RPOC2//RPOB//YCF3//NDHJ//AT5G09510//AT5G19480//BBM//KNAT3//ALX8//AT5G59240//CIA2//BBX29//OVA2//AT5G46910//NRPC2//anac084//HY5//AT5G03850//AT3G61920//ACS9//ATBBC1//AT4G37660//AT4G29360//ATSUMO1//AT4G24790//AFC2//IM//AT4G03090//ATXT2//AT1G18070//AT3G22210//AT3G28900//DEL3//emb1974//ATRAB18C//AT3G03130//LGO//AT1G56350//AJH2//APG13//RIP4//AT1G45110//AT1G12800//AtTLP8//AT1G15940//PDE343//AT1G10780//KNAT6//RPL16A//OTS1//PAP3//AT2G32070//AT2G01250//AtHBP2//ATHAM1//ATSPP//AtCCA1
GO:0044711	single-organism biosynthetic process	BP	0.0408075326168287	NDHE//ATPI//AT5G21100//AT5G19480//AT4G36640//AAO2//AtPNC2//ANNAT2//ALX8//AT5G59240//AT5G57815//FTSH11//OVA2//AtTK1b//ATCHS//ATDFD//PGPS2//ACS9//ATSK2//ATSUMO1//IM//CCD4//SMAP1//ATXT2//CIPK11//AT3G12320//AT3G22210//AT3G06530//AAC1//LGO//ATCYSD1//AT1G28100//AT1G55210//ABA2//AJH2//AT1G52930//APG13//ATSOT16//AT1G12800//3BETAHSD/D1//ATGA3OX1//BZO1//ABCF3//PDE343//AT1G42440//GRP3S//ATSK1//PES1//OTS1//AtOPR3//AT2G25450//ATKAO2//ANTR1//AtCCA1//GPPS
GO:0019748	secondary metabolic process	BP	0.0424938378753928	NDHE//AT4G36640//FTSH11//ATCHS//AT3G49210//ATXT2//AtOCT4//AT1G55210//ABA2//ATSOT16//AT1G45110//BZO1//GRP3S//AT2G25450//ATGSTU6
GO:0043255	regulation of carbohydrate biosynthetic ...	BP	0.0449490202166416	AJH2//AT2G25450
GO:0009058	biosynthetic process	BP	0.045366700082129	NDHE//RPS15//RPS12//RPL20//PSBT//PSBN//RPOA//ATPI//RPOC2//RPOB//YCF3//NDHJ//AT5G09510//AT5G21100//AT5G19480//AT4G36640//AAO2//BBM//AtPNC2//KNAT3//ANNAT2//ALX8//AT5G59240//AT5G57815//CIA2//BBX29//FTSH11//OVA2//AT5G46910//NRPC2//AtTK1b//ATCHS//anac084//HY5//AT5G03850//AT3G61920//ATDFD//PGPS2//MEE40//ACS9//ATBBC1//ATSK2//AT4G37660//AT4G29360//ATSUMO1//AT4G24790//AFC2//IM//CCD4//SMAP1//AT4G03090//ATXT2//CIPK11//AT1G18070//AT3G12320//AT3G22210//AT3G28900//DEL3//AT3G06530//emb1974//ATRAB18C//AAC1//AT3G03130//LGO//ATCYSD1//AT1G28100//AT1G56350//AT1G55210//ABA2//AJH2//AT1G52930//APG13//ATSOT16//RIP4//AT1G45110//AT1G12800//3BETAHSD/D1//ATGA3OX1//AtTLP8//AT1G15940//BZO1//ABCF3//PDE343//AT1G42440//AT1G10780//KNAT6//GRP3S//ATSK1//RPL16A//PES1//OTS1//PAP3//AtOPR3//AT2G25450//AT2G32070//AT2G01250//AtHBP2//ATHAM1//ATKAO2//ANTR1//ATSPP//AtCCA1//GPPS
GO:0090304	nucleic acid metabolic process	BP	0.0477227325743543	NDHE//RPS15//RPS12//RPL20//PSBT//PSBN//RPOA//ATPI//RPOC2//RPOB//YCF3//NDHJ//CRR4//AT5G09510//BBM//KNAT3//ALX8//AT5G59240//CIA2//BBX29//OVA2//AT5G46910//NRPC2//TOM20-4//AT5G23690//anac084//HY5//OBF5//AT3G56330//ATBBC1//AT3G46210//AT4G37660//AT4G29360//ATSUMO1//AT4G24790//AFC2//IM//AT4G03090//AT3G28900//AT1G80850//DEL3//AT3G06530//emb1974//ATRAB18C//AT3G03130//LGO//AJH2//AT1G52930//APG13//RIP4//AT1G45110//AT1G12800//AtTLP8//AT1G15940//PDE343//AT1G10780//KNAT6//RPL16A//PAP3//AT1G61410//AT2G32070//ATHAM1//AtCCA1
GO:0001510	RNA methylation	BP	0.0497912365996403	AT5G09510//ATBBC1//AT3G46210//AT3G28900//AT3G06530//AT1G52930//RPL16A
GO:0010099	regulation of photomorphogenesis	BP	0.0515441194135446	HY5//AJH2
GO:0006790	sulfur compound metabolic process	BP	0.0521333804261946	NDHE//ANNAT2//ALX8//FTSH11//ATXT2//APS2//ATCYSD1//ATSOT16//AT1G12800//3BETAHSD/D1//BZO1//GRP3S//AT2G25450
GO:0009059	macromolecule biosynthetic process	BP	0.0523200544033099	NDHE//RPS15//RPS12//RPL20//PSBT//PSBN//RPOA//ATPI//RPOC2//RPOB//YCF3//NDHJ//AT5G09510//AT5G19480//BBM//KNAT3//ALX8//AT5G59240//CIA2//BBX29//OVA2//AT5G46910//NRPC2//anac084//HY5//AT5G03850//AT3G61920//ACS9//ATBBC1//AT4G37660//AT4G29360//ATSUMO1//AT4G24790//AFC2//IM//AT4G03090//ATXT2//AT1G18070//AT3G22210//AT3G28900//DEL3//emb1974//ATRAB18C//AT3G03130//LGO//AT1G56350//AJH2//APG13//RIP4//AT1G45110//AT1G12800//AtTLP8//AT1G15940//PDE343//AT1G10780//KNAT6//RPL16A//OTS1//PAP3//AT2G32070//AT2G01250//AtHBP2//ATHAM1//ATSPP//AtCCA1
GO:1901615	organic hydroxy compound metabolic proce...	BP	0.0556618491306144	AT5G21100//AAO2//ANNAT2//PGPS2//ATSK2//AT3G12320//ABA2//CAD1//UGT74F1//3BETAHSD/D1//ATSK1//PES1//ATBCA4//CVL1//ANTR1//AtCCA1
GO:0009657	plastid organization	BP	0.0557331884914617	ALX8//OVA2//MEE40//cpHsc70-1//IM//Cpn60beta2//APG13//AT1G12800//PDE343
GO:0044550	secondary metabolite biosynthetic proces...	BP	0.0557331884914617	AT4G36640//FTSH11//ATCHS//ATXT2//AT1G55210//ATSOT16//BZO1//GRP3S//AT2G25450
GO:0046283	anthocyanin-containing compound metaboli...	BP	0.0572543603856128	ATCHS//HY5//CCD4//PAP3
GO:0043624	cellular protein complex disassembly	BP	0.0584596872922324	AT1G18070//AT1G56350
GO:0007568	aging	BP	0.0606118780465087	AT5G25770//STR18//AT3G49210//UBI10//PYD4
GO:0016070	RNA metabolic process	BP	0.0606166793049756	NDHE//RPS15//RPS12//RPL20//PSBT//PSBN//RPOA//ATPI//RPOC2//RPOB//YCF3//NDHJ//CRR4//AT5G09510//BBM//KNAT3//ALX8//AT5G59240//CIA2//BBX29//OVA2//AT5G46910//NRPC2//TOM20-4//AT5G23690//anac084//HY5//OBF5//AT3G56330//ATBBC1//AT3G46210//AT4G37660//AT4G29360//ATSUMO1//AFC2//IM//AT4G03090//AT3G28900//DEL3//AT3G06530//emb1974//ATRAB18C//AJH2//AT1G52930//APG13//RIP4//AT1G12800//AtTLP8//AT1G15940//PDE343//KNAT6//RPL16A//PAP3//AT2G32070//ATHAM1//AtCCA1
GO:0009408	response to heat	BP	0.0621464341998806	AtPNC2//ANNAT2//FTSH11//ATSUMO1//AtSAP10//LEA14//ABA2//CPN10//ATPDI9
GO:1901362	organic cyclic compound biosynthetic pro...	BP	0.0625569127212539	NDHE//RPS15//RPS12//RPL20//PSBT//PSBN//RPOA//ATPI//RPOC2//RPOB//YCF3//NDHJ//AT5G21100//AT4G36640//BBM//KNAT3//ANNAT2//ALX8//AT5G59240//CIA2//BBX29//AT5G46910//NRPC2//AtTK1b//ATCHS//anac084//HY5//ATDFD//ATSK2//AT4G37660//AT4G29360//ATSUMO1//IM//AT4G03090//DEL3//AT3G06530//emb1974//ATRAB18C//AT1G28100//AT1G55210//ABA2//AJH2//AT1G52930//APG13//ATSOT16//RIP4//AT1G12800//3BETAHSD/D1//AtTLP8//AT1G15940//PDE343//AT1G42440//KNAT6//GRP3S//PAP3//AtOPR3//ATHAM1//ANTR1//AtCCA1
GO:0006720	isoprenoid metabolic process	BP	0.0639167520219852	NDHE//AAO2//OVA2//IM//ABA2//AT1G12800//3BETAHSD/D1//ATGA3OX1//PES1//ATKAO2//GPPS
GO:1901659	glycosyl compound biosynthetic process	BP	0.0650692222829665	ATPI//FTSH11//ATXT2//ATSOT16//BZO1//GRP3S//AT2G25450
GO:0006119	oxidative phosphorylation	BP	0.0656742775304102	NDHE//NAD5
GO:0032984	macromolecular complex disassembly	BP	0.0656742775304102	AT1G18070//AT1G56350
GO:0042773	ATP synthesis coupled electron transport	BP	0.0656742775304102	NDHE//NAD5
GO:0043241	protein complex disassembly	BP	0.0656742775304102	AT1G18070//AT1G56350
GO:0043455	regulation of secondary metabolic proces...	BP	0.0656742775304102	ABA2//AT2G25450
GO:2000030	regulation of response to red or far red...	BP	0.0656742775304102	HY5//AJH2
GO:0007623	circadian rhythm	BP	0.0659960124117604	HY5//AT3G12320//PAP3//AtCCA1//ELF4
GO:0009695	jasmonic acid biosynthetic process	BP	0.0659960124117604	NDHE//AtPNC2//ALX8//CIPK11//AtOPR3
GO:0048511	rhythmic process	BP	0.0659960124117604	HY5//AT3G12320//PAP3//AtCCA1//ELF4
GO:0016143	S-glycoside metabolic process	BP	0.0667082581406037	FTSH11//ATXT2//ATSOT16//BZO1//GRP3S//AT2G25450
GO:0019757	glycosinolate metabolic process	BP	0.0667082581406037	FTSH11//ATXT2//ATSOT16//BZO1//GRP3S//AT2G25450
GO:0019760	glucosinolate metabolic process	BP	0.0667082581406037	FTSH11//ATXT2//ATSOT16//BZO1//GRP3S//AT2G25450
GO:0006807	nitrogen compound metabolic process	BP	0.0678069740997549	NDHE//RPS15//RPS12//RPL20//PSBT//PSBN//RPOA//ATPI//RPOC2//RPOB//YCF3//NDHJ//CRR4//AT5G09510//AT5G21100//BBM//AtPNC2//AT5G25770//KNAT3//ALX8//AT5G59240//CIA2//BBX29//OVA2//AT5G46910//NRPC2//TOM20-4//AT5G23690//AtTK1b//anac084//HY5//OBF5//AT3G56330//ATDFD//ACS9//ATBBC1//AT3G46210//ATSK2//AT4G37660//AT4G29360//ATSUMO1//AT4G24790//AFC2//IM//AT4G03090//AT3G12440//AtOCT4//AT3G22210//AT3G28900//NAD5//AT1G80850//DEL3//AT3G06530//emb1974//ATRAB18C//AT3G03130//LGO//ATCYSD1//AT1G28100//ABA2//AJH2//AT1G52930//APG13//ATSOT16//UGT74F1//RIP4//AT1G45110//AT1G12800//AtTLP8//AT1G15940//PDE343//AT1G42440//AT1G10780//KNAT6//GRP3S//RPL16A//PAP3//AT1G61410//AtOPR3//AT2G32070//ATHAM1//AtCCA1
GO:0019932	second-messenger-mediated signaling	BP	0.0690690348176835	ALX8//HY5//CIPK11
GO:0046483	heterocycle metabolic process	BP	0.0712192417570501	NDHE//RPS15//RPS12//RPL20//PSBT//PSBN//RPOA//ATPI//RPOC2//RPOB//YCF3//NDHJ//CRR4//AT5G09510//AT4G36640//BBM//AtPNC2//KNAT3//ALX8//AT5G59240//CIA2//BBX29//OVA2//AT5G46910//NRPC2//TOM20-4//AT5G23690//AtTK1b//anac084//HY5//OBF5//AT3G56330//ATDFD//ATBBC1//AT3G46210//AT4G37660//AT4G29360//ATSUMO1//AT4G24790//AFC2//IM//AT4G03090//AT3G12440//AT3G22210//AT3G28900//NAD5//AT1G80850//DEL3//AT3G06530//emb1974//ATRAB18C//AT3G03130//LGO//AT1G28100//ABA2//AJH2//AT1G52930//APG13//ATSOT16//RIP4//AT1G45110//AT1G12800//AtTLP8//AT1G15940//PDE343//AT1G42440//AT1G10780//KNAT6//GRP3S//RPL16A//PAP3//AT1G61410//AtOPR3//AT2G32070//ATHAM1//AtCCA1
GO:0045787	positive regulation of cell cycle	BP	0.0731673469525349	LGO//AJH2
GO:0042793	transcription from plastid promoter	BP	0.0737539210605172	APG13//AT1G12800//PDE343
GO:0044238	primary metabolic process	BP	0.0743346031210032	NDHE//RPS15//RPS12//RPL20//PSBT//PSBN//RPOA//ATPI//RPOC2//RPOB//YCF3//NDHJ//CRR4//RXF26//AT5G09510//AT5G21100//AT5G19480//AAO2//BBM//ATPCME//AtPNC2//AT5G25770//KNAT3//ANNAT2//ALX8//UBC3//AT5G59240//AT5G58950//AT5G57815//CIA2//BBX29//FTSH11//SDHAF2//OVA2//AT5G46910//NRPC2//TOM20-4//AT5G38510//BGLU31//AT5G23690//AtTK1b//AT5G18610//ATCHS//anac084//HY5//AT5G09800//OBF5//AT5G03850//AT3G61820//AT3G61920//AT3G59710//AT3G59730//AT3G56330//ATDFD//PGPS2//ACS9//ATBBC1//AT3G46210//ATSK2//AT4G37660//CYCB2;2//AT4G34960//AT4G29360//ATSUMO1//AtSAP10//AT4G24790//AFC2//cpHsc70-1//IM//SMAP1//UBI10//AT4G03090//ATXT2//AT4G01610//CIPK11//AT1G18070//AT3G12440//AtOCT4//AT3G22210//Cpn60beta2//AT3G28900//NAD5//AT1G80850//DEL3//AT3G06530//emb1974//ATRAB18C//AAC1//AT3G03130//LGO//ATCYSD1//AT1G56350//ABA2//AJH2//AT1G52930//APG13//ATSOT16//UGT74F1//CPN10//RIP4//AT1G45110//AT1G12800//atnudt3//AT1G28390//3BETAHSD/D1//ATGA3OX1//AtTLP8//AT1G15940//ABCF3//ATCUL2//PDE343//AT1G42440//AT1G10780//KNAT6//GRP3S//RPL16A//PES1//OTS1//BGLU6//AT1G70430//ASK18//PAP3//AT1G61410//AtOPR3//AT2G25450//AT2G32070//CVL1//AT2G01250//AtHBP2//ATHAM1//ATKAO2//ATMPK17//ATSPP//AtCCA1//GPPS//DVL11//ATPDI9
GO:0008299	isoprenoid biosynthetic process	BP	0.0776210062714911	NDHE//AAO2//OVA2//IM//ABA2//AT1G12800//3BETAHSD/D1//ATGA3OX1//ATKAO2//GPPS
GO:0015698	inorganic anion transport	BP	0.0792137788288952	AAP3//AT3G49210//AT4G40080//AtOCT4//ATBCA4//ANTR1