GOID TERM ONTOLOGY pValue Genes GO:0006891 intra-Golgi vesicle-mediated transport BP 0.000157143462366892 AT5G56020//MIA//AT3G12180//ATNHX5//ATRER1B//ATECA3//ATFAH1 GO:0055065 metal ion homeostasis BP 0.00676639861618292 ATOPT3//BHLH101//MIA//BHLH039//ACA10//ATECA3 GO:0055076 transition metal ion homeostasis BP 0.0124156063400312 BHLH101//BHLH039//ACA10//ATECA3 GO:0055080 cation homeostasis BP 0.0134812609318725 ATOPT3//BHLH101//MIA//ATMGT10//BHLH039//ACA10//ATECA3 GO:0010087 phloem or xylem histogenesis BP 0.0152644434740742 AT5G38020//FKD1//EPC1//JLO//AT1G30515 GO:0098771 inorganic ion homeostasis BP 0.0155322132179016 ATOPT3//BHLH101//MIA//BHLH039//ACA10//ATECA3 GO:0015914 phospholipid transport BP 0.0204626555491172 ALIS1//AT1G17500 GO:0050801 ion homeostasis BP 0.0263903836871453 ATOPT3//BHLH101//MIA//ATMGT10//BHLH039//ACA10//ATECA3 GO:0048193 Golgi vesicle transport BP 0.0308598370115754 AT5G56020//MIA//VPS26B//AT3G12180//AT1G17500//ATMPK2//AT1G65820//ATNHX5//ATRER1B//ATECA3//ATFAH1 GO:0055072 iron ion homeostasis BP 0.0370195311690884 BHLH101//BHLH039 GO:0048878 chemical homeostasis BP 0.0540464521747703 ATOPT3//BHLH101//MIA//ATMGT10//BHLH039//ACA10//ATECA3 GO:0031123 RNA 3'-end processing BP 0.0626658462383976 ATCPSF160//AtCAF1a GO:1901661 quinone metabolic process BP 0.0801945324769009 DHNAT2//ATICS2 GO:1901663 quinone biosynthetic process BP 0.0801945324769009 DHNAT2//ATICS2 GO:0042181 ketone biosynthetic process BP 0.0863382779843978 DHNAT2//ATICS2 GO:0006855 drug transmembrane transport BP 0.0909891731367413 AT5G44050//AT3G26590//AT1G61890 GO:0016192 vesicle-mediated transport BP 0.0952568394049683 AT5G56020//ATEXO70A3//MIA//VPS26B//VPS22//AT3G12180//AT1G17500//ATMPK2//AT1G65820//ATNHX5//ATRER1B//ATECA3//ATSYP112//ATFAH1 GO:0015893 drug transport BP 0.0991943079553482 AT5G44050//AT3G26590//AT1G61890 GO:0072330 monocarboxylic acid biosynthetic process BP 0.10148638454498 CYP702A2//AT5G38020//ATMAPR3//ATEDS1//FAE1//ATMEK1//AT3G14470//AT1G55280//AT1G23450//AT1G65820//AT1G10340//ATFAH1 GO:0042493 response to drug BP 0.103405013228244 AT5G44050//AT3G26590//AT1G61890 GO:0010089 xylem development BP 0.107685464288709 AT5G38020//JLO//AT1G30515 GO:0009156 ribonucleoside monophosphate biosyntheti... BP 0.112033879403469 ACA10//ATECA3//AT2G44530 GO:0009595 detection of biotic stimulus BP 0.116448462313388 ATEDS1//ATMEK1//AT1G10340 GO:0009124 nucleoside monophosphate biosynthetic pr... BP 0.120927404744471 ACA10//ATECA3//AT2G44530 GO:0006875 cellular metal ion homeostasis BP 0.125468888799188 ATOPT3//MIA//ACA10 GO:0030003 cellular cation homeostasis BP 0.138975257780265 ATOPT3//MIA//ATMGT10//ACA10 GO:0000079 regulation of cyclin-dependent protein s... BP 0.146837973982632 CYCP1;1//CYCT1;3 GO:0000038 very long-chain fatty acid metabolic pro... BP 0.154008410367486 FAE1//ATFAH1 GO:0009846 pollen germination BP 0.161245091873792 MIA//ATATG6 GO:0048508 embryonic meristem development BP 0.161245091873792 ATWOX14//ALE2 GO:0006873 cellular ion homeostasis BP 0.161933656083048 ATOPT3//MIA//ATMGT10//ACA10 GO:0010106 cellular response to iron ion starvation BP 0.163832639092601 BHLH101//BHLH039//ENDO5 GO:0009888 tissue development BP 0.167914085855679 ATOPT3//AT5G19800//AIL5//EDA23//AT5G38020//AT5G24350//MIA//CYCP1;1//FKD1//PLA//EPC1//ATROPGEF1//JLO//ATWOX14//BGAL1//ATMYB5//AT1G30515//AT1G31130//ARR12//ALE2 GO:0044070 regulation of anion transport BP 0.168542301169898 AtGDU7//APM1 GO:0009267 cellular response to starvation BP 0.175297173104492 BHLH101//MIA//ATATG6//BHLH039//ATMEK1//ENDO5 GO:0009556 microsporogenesis BP 0.175894526287932 FAR1//ATGSL01 GO:0035725 sodium ion transmembrane transport BP 0.175894526287932 ATCHX4//ATNHX5 GO:0032879 regulation of localization BP 0.178423071944971 AtGDU7//ATGSL1//APM1//BGAL1//ATGSK1 GO:0006397 mRNA processing BP 0.182041613357709 ATCPSF160//AtCAF1a//PTB3//AT2G16940 GO:0055082 cellular chemical homeostasis BP 0.1861595600496 ATOPT3//MIA//ATMGT10//ACA10 GO:0010082 regulation of root meristem growth BP 0.187494818830566 374_ GO:0010942 positive regulation of cell death BP 0.187494818830566 373_ GO:0070588 calcium ion transmembrane transport BP 0.187494818830566 702_ GO:0090056 regulation of chlorophyll metabolic proc... BP 0.187494818830566 374_ GO:1901463 regulation of tetrapyrrole biosynthetic ... BP 0.187494818830566 374_ GO:0043648 dicarboxylic acid metabolic process BP 0.190742967255749 ATLOG9//ATGSL1 GO:0048236 plant-type spore development BP 0.190742967255749 FAR1//ATGSL01 GO:0042594 response to starvation BP 0.193778159809736 BHLH101//MIA//ATATG6//BHLH039//ATMEK1//ENDO5 GO:0010351 lithium ion transport BP 0.198229133013167 ATCHX4//ATNHX5 GO:0051049 regulation of transport BP 0.198690680187436 AtGDU7//ATGSL1//APM1//ATGSK1 GO:0006541 glutamine metabolic process BP 0.204198035158711 710_ GO:0009956 radial pattern formation BP 0.204198035158711 904_ GO:0010044 response to aluminum ion BP 0.204198035158711 232_ GO:0010152 pollen maturation BP 0.204198035158711 846_ GO:0010160 formation of organ boundary BP 0.204198035158711 701_ GO:0019432 triglyceride biosynthetic process BP 0.204198035158711 238_ GO:0048859 formation of anatomical boundary BP 0.204198035158711 701_ GO:0051193 regulation of cofactor metabolic process BP 0.204198035158711 374_ GO:0006417 regulation of translation BP 0.205750203232537 ATMEK1//PTB3 GO:0009734 auxin-activated signaling pathway BP 0.205750203232537 AIL5//FKD1 GO:0006633 fatty acid biosynthetic process BP 0.207183867714426 AT5G38020//FAE1//AT1G65820//ATFAH1 GO:0043069 negative regulation of programmed cell d... BP 0.207183867714426 ATEDS1//ATMEK1//AtMC2//ATFAH1 GO:0002237 response to molecule of bacterial origin BP 0.210475537288133 ATMEK1//AtMC2//AT1G10340 GO:0031669 cellular response to nutrient levels BP 0.212961964852698 BHLH101//MIA//ATATG6//BHLH039//ATMEK1//ENDO5 GO:0060548 negative regulation of cell death BP 0.220115035844522 ATEDS1//ATMEK1//AtMC2//ATFAH1 GO:0006536 glutamate metabolic process BP 0.220559095291139 710_ GO:0006995 cellular response to nitrogen starvation BP 0.220559095291139 993_ GO:0010214 seed coat development BP 0.220559095291139 985_ GO:1901401 regulation of tetrapyrrole metabolic pro... BP 0.220559095291139 374_ GO:0009625 response to insect BP 0.220878942233935 AtCAF1a//ATMEK1 GO:0045165 cell fate commitment BP 0.220878942233935 MIA//AtMYB104 GO:0009161 ribonucleoside monophosphate metabolic p... BP 0.221218075479334 ACA10//ATECA3//AT2G44530 GO:0006754 ATP biosynthetic process BP 0.228477978038074 ACA10//ATECA3 GO:0009617 response to bacterium BP 0.231162286885798 ACD6//AT5G05320//EPC1//ATMAPR3//ATEDS1//AtCAF1a//ATMEK1//AtMC2//PCC1//AT1G10340 GO:0002679 respiratory burst involved in defense re... BP 0.232068437547565 ATEDS1//RRTF1//ATMEK1 GO:0009123 nucleoside monophosphate metabolic proce... BP 0.232068437547565 ACA10//ATECA3//AT2G44530 GO:0045730 respiratory burst BP 0.232068437547565 ATEDS1//RRTF1//ATMEK1 GO:0019220 regulation of phosphate metabolic proces... BP 0.233255181648681 CYCP1;1//ATEDS1//ATMEK1//CYCT1;3 GO:0051174 regulation of phosphorus metabolic proce... BP 0.233255181648681 CYCP1;1//ATEDS1//ATMEK1//CYCT1;3 GO:0006074 (1->3)-beta-D-glucan metabolic process BP 0.236584983051508 281_ GO:0006075 (1->3)-beta-D-glucan biosynthetic proces... BP 0.236584983051508 281_ GO:0006783 heme biosynthetic process BP 0.236584983051508 365_ GO:0010449 root meristem growth BP 0.236584983051508 374_ GO:0046460 neutral lipid biosynthetic process BP 0.236584983051508 238_ GO:0046463 acylglycerol biosynthetic process BP 0.236584983051508 238_ GO:0009697 salicylic acid biosynthetic process BP 0.242119945078323 ATEDS1//ATMEK1//AT3G14470//AT1G10340 GO:0009692 ethylene metabolic process BP 0.243013591663132 AtCAF1a//RRTF1//AT1G03730 GO:0009693 ethylene biosynthetic process BP 0.243013591663132 AtCAF1a//RRTF1//AT1G03730 GO:0043449 cellular alkene metabolic process BP 0.243013591663132 AtCAF1a//RRTF1//AT1G03730 GO:0043450 alkene biosynthetic process BP 0.243013591663132 AtCAF1a//RRTF1//AT1G03730 GO:1900673 olefin metabolic process BP 0.243013591663132 AtCAF1a//RRTF1//AT1G03730 GO:1900674 olefin biosynthetic process BP 0.243013591663132 AtCAF1a//RRTF1//AT1G03730 GO:0006814 sodium ion transport BP 0.243725020649533 ATCHX4//ATNHX5 GO:0071365 cellular response to auxin stimulus BP 0.243725020649533 AIL5//FKD1 GO:0071900 regulation of protein serine/threonine k... BP 0.243725020649533 CYCP1;1//CYCT1;3 GO:0042592 homeostatic process BP 0.244206238974258 ATOPT3//BHLH101//AT5G42850//MIA//ATMGT10//BHLH039//ACA10//ATECA3 GO:0031667 response to nutrient levels BP 0.246294555473402 BHLH101//MIA//ATATG6//BHLH039//ATMEK1//ENDO5 GO:0016053 organic acid biosynthetic process BP 0.247656232221001 CYP702A2//ATLOG9//ATSUMO2//AT5G38020//ATGSL1//ASN3//ATMAPR3//ATEDS1//FAE1//ATMEK1//AT3G14470//AT1G55360//AT1G55280//AT1G23450//AT1G65820//AT1G10340//ATFAH1 GO:0046394 carboxylic acid biosynthetic process BP 0.247656232221001 CYP702A2//ATLOG9//ATSUMO2//AT5G38020//ATGSL1//ASN3//ATMAPR3//ATEDS1//FAE1//ATMEK1//AT3G14470//AT1G55360//AT1G55280//AT1G23450//AT1G65820//AT1G10340//ATFAH1 GO:0032880 regulation of protein localization BP 0.251365350908889 BGAL1//ATGSK1