GOID TERM ONTOLOGY pValue Genes GO:0009624 response to nematode BP 0.0014035931008709 AT5G14940//ABCG6//AAP1//atcax2//ABCG1 GO:0010260 organ senescence BP 0.003434840136006 ATGLN1;1//ATBP-1//ATATE1//ATATG2//anac047//ALPHA GO:0010359 regulation of anion channel activity BP 0.00353793294932533 AT5G20550//AT5G08560//AT1G22440 GO:1903959 regulation of anion transmembrane transp... BP 0.00353793294932533 AT5G20550//AT5G08560//AT1G22440 GO:0043269 regulation of ion transport BP 0.00466617709677285 AT5G20550//AAP3//AT5G08560//atcax2//AT1G22440 GO:0022898 regulation of transmembrane transporter ... BP 0.00490584239179365 AT5G20550//AT5G08560//AT1G22440 GO:0032409 regulation of transporter activity BP 0.00490584239179365 AT5G20550//AT5G08560//AT1G22440 GO:0032412 regulation of ion transmembrane transpor... BP 0.00490584239179365 AT5G20550//AT5G08560//AT1G22440 GO:0034762 regulation of transmembrane transport BP 0.00490584239179365 AT5G20550//AT5G08560//AT1G22440 GO:0034765 regulation of ion transmembrane transpor... BP 0.00490584239179365 AT5G20550//AT5G08560//AT1G22440 GO:0032879 regulation of localization BP 0.0049323146465409 AT5G20550//AAP3//AT5G08560//ATGL1//atcax2//AT1G22440 GO:0030001 metal ion transport BP 0.00504862515085969 AT5G20550//ATCBL9//AT5G17820//ATATE1//atcax2//AT3G15690//GLP4//HMA5//AT1G22440//EDA4//ATCHX15//KUP6//AT2G39110//BGLU26 GO:0010413 glucuronoxylan metabolic process BP 0.0053834274696155 ARAC2//AT5G08560//LAC10//ANAC030//ANAC012//AT1G30750//AT1G54790//IRX9 GO:0045492 xylan biosynthetic process BP 0.00560937659679248 ARAC2//AT5G08560//LAC10//ANAC030//ANAC012//AT1G30750//AT1G54790//IRX9 GO:0042546 cell wall biogenesis BP 0.00581542785270293 ARAC2//AT5G08560//LAC10//ANAC030//ANAC012//DUO3//AT1G30750//AT1G54790//IRX9//CESA10 GO:0045491 xylan metabolic process BP 0.00608292094390916 ARAC2//AT5G08560//LAC10//ANAC030//ANAC012//AT1G30750//AT1G54790//IRX9 GO:0044038 cell wall macromolecule biosynthetic pro... BP 0.00684951171680587 ARAC2//AT5G08560//LAC10//ANAC030//ANAC012//AT1G30750//AT1G54790//IRX9 GO:0070589 cellular component macromolecule biosynt... BP 0.00684951171680587 ARAC2//AT5G08560//LAC10//ANAC030//ANAC012//AT1G30750//AT1G54790//IRX9 GO:0070592 cell wall polysaccharide biosynthetic pr... BP 0.00684951171680587 ARAC2//AT5G08560//LAC10//ANAC030//ANAC012//AT1G30750//AT1G54790//IRX9 GO:0071554 cell wall organization or biogenesis BP 0.0072724182849309 AT1G26240//ARAC2//AT5G08560//LAC10//AtPERK5//ATPME38//ATROPGEF8//ANAC030//TOR//ANAC012//DUO3//AT1G30750//ATCHX15//AT1G54790//IRX9//CESA10//CASP3//ATHPT//BGLU26 GO:0044070 regulation of anion transport BP 0.00849126505725798 AT5G20550//AT5G08560//AT1G22440 GO:0010410 hemicellulose metabolic process BP 0.00925158692181798 ARAC2//AT5G08560//LAC10//ANAC030//ANAC012//AT1G30750//AT1G54790//IRX9 GO:0051049 regulation of transport BP 0.0120182981334512 AT5G20550//AAP3//AT5G08560//atcax2//AT1G22440 GO:0010101 post-embryonic root morphogenesis BP 0.0146783638503253 ALF4//ASL16//CYCA2;3 GO:0010102 lateral root morphogenesis BP 0.0146783638503253 ALF4//ASL16//CYCA2;3 GO:0006820 anion transport BP 0.0151935112337474 AT5G20550//AAP3//AT5G17820//AT5G15240//AT5G08560//AT4G37900//AAP1//atcax2//anac047//GLP4//AT1G22440//AT2G39110//ABCG1//BGLU26 GO:0070646 protein modification by small protein re... BP 0.0154858773480011 HOS15//AT5G61880//ATBP-1//AT5G08560//UBP16//DUO3//AT2G40700 GO:0007568 aging BP 0.0165391915227419 ATGLN1;1//ATBP-1//ATATE1//ATATG2//anac047//ALPHA GO:0009913 epidermal cell differentiation BP 0.0168923054427728 AT4G39630//ATGL1 GO:0030855 epithelial cell differentiation BP 0.0168923054427728 AT4G39630//ATGL1 GO:0006812 cation transport BP 0.0176512741354527 AT5G20550//AAP3//ATCBL9//AT5G17820//AT5G15240//ATATE1//atcax2//AT3G15690//GLP4//HMA5//AT1G22440//EDA4//ATCHX15//KUP6//AT2G39110//BGLU26 GO:0010150 leaf senescence BP 0.0177058629353908 ATGLN1;1//ATATE1//ATATG2//ALPHA GO:0010383 cell wall polysaccharide metabolic proce... BP 0.0179542852250675 ARAC2//AT5G08560//LAC10//ANAC030//ANAC012//AT1G30750//AT1G54790//IRX9 GO:0071705 nitrogen compound transport BP 0.0185986110607226 AAP3//AT5G14940//AT5G17820//AT5G15240//AT4G37900//ABCB28//AAP1//atcax2//anac047//GLP4//AT1G22440//YSL8//AT2G40700//AT2G39110//ABCG1//BGLU26 GO:0009686 gibberellin biosynthetic process BP 0.0193410004625644 AtRGL3//ATMYB65//ATGA20OX5 GO:0016102 diterpenoid biosynthetic process BP 0.0210562380023279 AtRGL3//ATMYB65//ATGA20OX5 GO:0034637 cellular carbohydrate biosynthetic proce... BP 0.0213197919612271 ARAC2//AT5G08560//LAC10//TPPC//ANAC030//ANAC012//ATTPS3//AT1G30750//AT1G54790//IRX9//CESA10 GO:0006811 ion transport BP 0.0221414426980123 AT5G20550//AAP3//ATCBL9//AT5G17820//AT5G15240//AT5G08560//ATATE1//AT4G37900//AAP1//atcax2//AT3G15690//anac047//GLP4//HMA5//AT1G22440//EDA4//ATCHX15//KUP6//AT2G39110//ABCG1//BGLU26 GO:0009832 plant-type cell wall biogenesis BP 0.0227613645430741 ARAC2//ANAC012//AT1G54790//IRX9//CESA10 GO:0098656 anion transmembrane transport BP 0.0247290589991088 AT5G20550//AT5G08560//AT1G22440 GO:0044036 cell wall macromolecule metabolic proces... BP 0.0251608266803271 ARAC2//AT5G08560//LAC10//ANAC030//ANAC012//DUO3//AT1G30750//AT1G54790//IRX9 GO:0008544 epidermis development BP 0.0269488389665944 AT4G39630//ATGL1 GO:0010167 response to nitrate BP 0.0269863782291092 AT5G17820//AT3G48450//GLP4//AT1G22440//AT2G39110//BGLU26 GO:0000041 transition metal ion transport BP 0.0279080536483477 AT5G20550//AT5G17820//atcax2//GLP4//AT1G22440//EDA4//AT2G39110 GO:0009685 gibberellin metabolic process BP 0.0287246100763642 AtRGL3//ATMYB65//ATGA20OX5 GO:0009740 gibberellic acid mediated signaling path... BP 0.0287246100763642 AtRGL3//ATGL1//ATMYB65 GO:0010476 gibberellin mediated signaling pathway BP 0.0308429274881339 AtRGL3//ATGL1//ATMYB65 GO:0044264 cellular polysaccharide metabolic proces... BP 0.0317898083860048 ARAC2//AT5G08560//LAC10//ANAC030//ANAC012//ATTPS3//ATXTH28//AT1G30750//AT1G54790//IRX9//CESA10 GO:0034220 ion transmembrane transport BP 0.0319572075952133 AT5G20550//ATCBL9//AT5G08560//AT1G22440//ATCHX15//KUP6 GO:0009312 oligosaccharide biosynthetic process BP 0.0330411840517666 AtRGL3//TPPC//ATTPS3 GO:0071370 cellular response to gibberellin stimulu... BP 0.0330411840517666 AtRGL3//ATGL1//ATMYB65 GO:0060429 epithelium development BP 0.0346872142875337 AT4G39630//ATGL1 GO:0016101 diterpenoid metabolic process BP 0.0353189673990612 AtRGL3//ATMYB65//ATGA20OX5 GO:0071555 cell wall organization BP 0.0364426022267796 AT1G26240//AtPERK5//ATPME38//ATROPGEF8//ANAC030//TOR//DUO3//ATCHX15//CASP3//ATHPT//BGLU26 GO:0033044 regulation of chromosome organization BP 0.0369601026946316 AT5G08560//AT3G49830//AtMORC1//TOR//DUO3 GO:0065009 regulation of molecular function BP 0.0386660807134243 AT5G20550//AT5G58820//AT5G08560//EDA10//CYCA2;3//AT1G22440 GO:0071804 cellular potassium ion transport BP 0.0388404517992949 ATCBL9//KUP6 GO:0071805 potassium ion transmembrane transport BP 0.0388404517992949 ATCBL9//KUP6 GO:0016132 brassinosteroid biosynthetic process BP 0.0401111097746591 AT5G20550//AT1G22440//AT1G30750 GO:0006366 transcription from RNA polymerase II pro... BP 0.0426243003034812 NRPB6A//NRPB12//GCT GO:0016129 phytosteroid biosynthetic process BP 0.0426243003034812 AT5G20550//AT1G22440//AT1G30750 GO:0000956 nuclear-transcribed mRNA catabolic proce... BP 0.0427621431207524 HOS15//CBNAC//UBP16//AT1G07990 GO:0006402 mRNA catabolic process BP 0.0427621431207524 HOS15//CBNAC//UBP16//AT1G07990 GO:0009887 organ morphogenesis BP 0.043622077828134 AtRGL3//AT5G08560//ASL16//AT1G68420//TOR//CYCA2;3//DUO3//AT1G54840//ATHPT GO:0048522 positive regulation of cellular process BP 0.0449671053835645 DEL2//HOS15//AT5G08560//CBNAC//ATMYB65//ANAC030//ATMAP4K//TOR//ANAC012//DUO3//POP4//MAPKKK14//ATHPT GO:0005992 trehalose biosynthetic process BP 0.0476739155159934 TPPC//ATTPS3 GO:0005976 polysaccharide metabolic process BP 0.0488351966724007 ARAC2//AT5G08560//LAC10//ANAC030//ANAC012//ATTPS3//ATXTH28//AT1G30750//AT1G54790//IRX9//CESA10 GO:0006401 RNA catabolic process BP 0.0505688163735027 HOS15//CBNAC//UBP16//AT1G07990 GO:0009739 response to gibberellin BP 0.0505688163735027 AtRGL3//GASA3//ATGL1//ATMYB65 GO:0006865 amino acid transport BP 0.0505998191179471 AAP3//AT5G15240//AT4G37900//AAP1//atcax2//anac047//ABCG1 GO:0016131 brassinosteroid metabolic process BP 0.0506240638113076 AT5G20550//AT1G22440//AT1G30750 GO:0033692 cellular polysaccharide biosynthetic pro... BP 0.0513950361046997 ARAC2//AT5G08560//LAC10//ANAC030//ANAC012//AT1G30750//AT1G54790//IRX9//CESA10 GO:0010311 lateral root formation BP 0.0523384089005258 ASL16//CYCA2;3 GO:0015696 ammonium transport BP 0.0523384089005258 AAP3//atcax2 GO:0019216 regulation of lipid metabolic process BP 0.0523384089005258 ATATE1//ATHPT GO:0016128 phytosteroid metabolic process BP 0.0534414253442249 AT5G20550//AT1G22440//AT1G30750 GO:0015698 inorganic anion transport BP 0.0543937092301304 AAP3//AT5G17820//atcax2//GLP4//AT1G22440//AT2G39110//BGLU26 GO:0005991 trehalose metabolic process BP 0.0571579696423188 TPPC//ATTPS3 GO:0015802 basic amino acid transport BP 0.0571579696423188 AAP3//atcax2 GO:0010106 cellular response to iron ion starvation BP 0.0591047175881299 AT5G17820//GLP4//AT1G22440//AT2G39110 GO:0051128 regulation of cellular component organiz... BP 0.0598968506804589 AT5G08560//AT3G49830//AtMORC1//AtPERK5//ANAC030//TOR//CYCA2;3//DUO3 GO:0042446 hormone biosynthetic process BP 0.0610031599225139 AT5G20550//AT5G44350//AT1G22440//AT1G30750//BGLU26 GO:0000271 polysaccharide biosynthetic process BP 0.0634950684468525 ARAC2//AT5G08560//LAC10//ANAC030//ANAC012//AT1G30750//AT1G54790//IRX9//CESA10 GO:0015849 organic acid transport BP 0.0639238291754561 AAP3//AT5G15240//AT4G37900//AAP1//atcax2//anac047//ABCG1 GO:0046942 carboxylic acid transport BP 0.0639238291754561 AAP3//AT5G15240//AT4G37900//AAP1//atcax2//anac047//ABCG1 GO:0045229 external encapsulating structure organiz... BP 0.0658938094733637 AT1G26240//AtPERK5//ATPME38//ATROPGEF8//ANAC030//TOR//DUO3//ATCHX15//CASP3//ATHPT//BGLU26 GO:0006694 steroid biosynthetic process BP 0.0707836068061941 AT5G20550//LAS1//AT1G22440//AT1G30750 GO:0071669 plant-type cell wall organization or bio... BP 0.0720677351434399 AT1G26240//ARAC2//AtPERK5//ATROPGEF8//ANAC012//ATCHX15//AT1G54790//IRX9//CESA10 GO:0010015 root morphogenesis BP 0.0730875931307351 ALF4//AT5G17820//ASL16//IDL1//ANAC030//TOR//CYCA2;3//DUO3 GO:0010628 positive regulation of gene expression BP 0.0730875931307351 HOS15//ATMYB65//ANAC030//ATMAP4K//TOR//ANAC012//MAPKKK14//ATHPT GO:0010557 positive regulation of macromolecule bio... BP 0.0744966185261803 HOS15//ATMYB65//ANAC030//ATMAP4K//TOR//ANAC012//MAPKKK14//ATHPT GO:0033043 regulation of organelle organization BP 0.0776130291286125 AT5G08560//AT3G49830//AtMORC1//ANAC030//TOR//DUO3 GO:0010440 stomatal lineage progression BP 0.0778440313827732 CYCA2;3//CYCB3;1 GO:0006826 iron ion transport BP 0.0783170501129802 AT5G17820//GLP4//AT1G22440//AT2G39110 GO:0007015 actin filament organization BP 0.0783170501129802 ARAC2//ANAC030//TOR//DUO3 GO:0012501 programmed cell death BP 0.0786122841970131 AAP3//ACD5//RPS4//AtMORC1//ABI1//atcax2//ATMYB65//ATERF13//BGLU26 GO:0031328 positive regulation of cellular biosynth... BP 0.0788221449451343 HOS15//ATMYB65//ANAC030//ATMAP4K//TOR//ANAC012//MAPKKK14//ATHPT GO:0044262 cellular carbohydrate metabolic process BP 0.0812105441773819 ARAC2//AT5G08560//LAC10//TPPC//ANAC030//ANAC012//ATTPS3//ATXTH28//AT1G30750//AT1G54790//IRX9//CESA10 GO:0042538 hyperosmotic salinity response BP 0.0831596111818425 AtRGL3//ATBP-1//AT4G30660//ABI1//ATERF13 GO:0016051 carbohydrate biosynthetic process BP 0.0835805357207349 AtRGL3//ARAC2//AT5G08560//LAC10//GATL7//TPPC//ANAC030//ANAC012//ATTPS3//AT1G30750//AT1G54790//IRX9//CESA10