GOID TERM ONTOLOGY pValue Genes GO:0050794 regulation of cellular process BP 0.000139890600034579 YAB5//SUFE2//ACAM-3//AT1G58110//AT5G66330//AT5G56040//AT5G51910//AT5G11250//ATEIF3E-1//AT3G45530//ATUBP3//CST//GATA9//NINJA//AT4G26380//ATML1//AtRBP-DR1//AGL78//AT4G01910//AT4G01760//EDA8//IAA13//DRT100//ZFP4//AT3G23740//PUB24//AT3G03130//AT1G27900//AT1G70550//ATGATL1//EDA10//ARAC5//ABCG36//AT1G36060//ATRPN1A//BRG2//ATMPK1//AT1G27190//AT2G01630//AT2G45120//ROL5 GO:0007165 signal transduction BP 0.000196797251260708 ACAM-3//AT1G58110//AT5G66330//AT5G56040//AT5G11250//ATEIF3E-1//AT3G45530//ATUBP3//CST//NINJA//AT4G26380//AtRBP-DR1//AT4G01910//AT4G01760//EDA8//DRT100//PUB24//AT1G70550//ATGATL1//EDA10//ARAC5//ABCG36//ATMPK1//AT1G27190 GO:0044700 single organism signaling BP 0.000305640605402654 ACAM-3//AT1G58110//AT5G66330//AT5G56040//AT5G11250//ATEIF3E-1//AT3G45530//ATUBP3//CST//NINJA//AT4G26380//AtRBP-DR1//AT4G01910//AT4G01760//EDA8//DRT100//PUB24//AT1G70550//ATGATL1//EDA10//ARAC5//ABCG36//ATMPK1//AT1G27190 GO:0023052 signaling BP 0.000309903405512827 ACAM-3//AT1G58110//AT5G66330//AT5G56040//AT5G11250//ATEIF3E-1//AT3G45530//ATUBP3//CST//NINJA//AT4G26380//AtRBP-DR1//AT4G01910//AT4G01760//EDA8//DRT100//PUB24//AT1G70550//ATGATL1//EDA10//ARAC5//ABCG36//ATMPK1//AT1G27190 GO:0050789 regulation of biological process BP 0.000355942834488493 YAB5//SUFE2//ACAM-3//AT1G58110//AT5G66330//AT5G56040//ACBP//AT5G51910//AtEMF2//AT5G11250//ATEIF3E-1//AT3G45530//ATUBP3//CST//GATA9//NINJA//AT4G26380//ATML1//AtRBP-DR1//AGL78//AT4G01910//AT4G01760//EDA8//IAA13//DRT100//ZFP4//AT3G23740//PUB24//AT3G03130//AT1G27900//AT1G70550//ATGATL1//EDA10//ARAC5//ABCG36//AT1G36060//ATRPN1A//AtGRF3//BRG2//ATMPK1//AT1G27190//AT2G01630//AT2G45120//ROL5 GO:0035556 intracellular signal transduction BP 0.000658341804879886 ACAM-3//AT1G58110//AT3G45530//CST//AT4G26380//AT4G01910//AT4G01760//PUB24//EDA10//ARAC5//ABCG36//ATMPK1 GO:0007154 cell communication BP 0.0013562806215193 ACAM-3//AT1G58110//AT5G66330//AT5G56040//AT5G11250//ATEIF3E-1//AT3G45530//ATUBP3//CST//NINJA//AT4G26380//AtRBP-DR1//AT4G01910//AT4G01760//EDA8//DRT100//PUB24//AT1G70550//ATGATL1//EDA10//ARAC5//ABCG36//ATMPK1//AT1G61490//AT1G27190 GO:0065007 biological regulation BP 0.00136922848511739 YAB5//SUFE2//ACAM-3//AT1G58110//AT5G66330//AT5G56040//ACBP//AT5G51910//AtEMF2//AT5G11250//CYP79A2//ATEIF3E-1//AT3G45530//ATUBP3//CST//GATA9//NINJA//AT4G26380//ATML1//AtRBP-DR1//AGL78//AT4G01910//AT4G01760//EDA8//IAA13//DRT100//ZFP4//AT3G23740//PUB24//AT3G03130//AT1G27900//AT1G70550//ATGATL1//EDA10//ARAC5//ABCG36//AT1G36060//ATRPN1A//AtGRF3//BRG2//ATMPK1//AT1G27190//AT2G01630//AT2G45120//ROL5 GO:0019722 calcium-mediated signaling BP 0.00152740586470862 ACAM-3//AT1G58110//CST GO:0019932 second-messenger-mediated signaling BP 0.00279213445789115 ACAM-3//AT1G58110//CST GO:0009867 jasmonic acid mediated signaling pathway BP 0.00649412148431412 CST//NINJA//PUB24//ATGATL1//ABCG36//ATMPK1 GO:0071395 cellular response to jasmonic acid stimu... BP 0.00649412148431412 CST//NINJA//PUB24//ATGATL1//ABCG36//ATMPK1 GO:0009561 megagametogenesis BP 0.0124079613254022 EDA8//EDA10//ASE1//ROL5 GO:0019222 regulation of metabolic process BP 0.013244704675664 YAB5//SUFE2//AT1G58110//AT5G51910//AtEMF2//ATEIF3E-1//GATA9//NINJA//ATML1//AGL78//IAA13//ZFP4//AT3G23740//PUB24//AT3G03130//AT1G27900//EDA10//ABCG36//AT1G36060//ATRPN1A//ATMPK1//AT2G01630//AT2G45120//ROL5 GO:0042436 indole-containing compound catabolic pro... BP 0.0132930744310338 CYP79A2//ATGATL1//ABCG36 GO:0006464 cellular protein modification process BP 0.0133528906847795 AT2G33170//AT1G58110//AT5G66080//AT5G56040//AtEMF2//AT5G40030//UBQ9//ATEIF3E-1//ATUBP3//CST//CRK16//ATML1//EDA8//AT3G23740//PUB24//XXT5//AT1G10750//ATMPK1//AT1G61490//AT1G27190//AT2G42960//AT2G01630//ATCNGC6//ROL5 GO:0036211 protein modification process BP 0.0133528906847795 AT2G33170//AT1G58110//AT5G66080//AT5G56040//AtEMF2//AT5G40030//UBQ9//ATEIF3E-1//ATUBP3//CST//CRK16//ATML1//EDA8//AT3G23740//PUB24//XXT5//AT1G10750//ATMPK1//AT1G61490//AT1G27190//AT2G42960//AT2G01630//ATCNGC6//ROL5 GO:0031323 regulation of cellular metabolic process BP 0.0187488519568814 YAB5//SUFE2//AT1G58110//AT5G51910//ATEIF3E-1//GATA9//NINJA//ATML1//AGL78//IAA13//ZFP4//AT3G23740//PUB24//AT3G03130//AT1G27900//ABCG36//AT1G36060//ATMPK1//AT2G01630//AT2G45120//ROL5 GO:0009863 salicylic acid mediated signaling pathwa... BP 0.0204659887270813 CST//AtRBP-DR1//PUB24//ATGATL1//ABCG36//ATMPK1 GO:0071446 cellular response to salicylic acid stim... BP 0.0209108012885894 CST//AtRBP-DR1//PUB24//ATGATL1//ABCG36//ATMPK1 GO:0032504 multicellular organism reproduction BP 0.0213621555172543 ACBP//ATEIF3E-1//EDA8//ATGATL1//ASE1//ROL5 GO:0009553 embryo sac development BP 0.0234813156852868 EDA8//EDA10//ASE1//ROL5 GO:0012501 programmed cell death BP 0.0236851195573193 CST//AtRBP-DR1//PUB24//ATGATL1//ABCG36//BRG2//ATMPK1 GO:0006270 DNA replication initiation BP 0.0242461751683064 AT3G23740//AT3G03130 GO:0060255 regulation of macromolecule metabolic pr... BP 0.028254744700036 YAB5//AT1G58110//AT5G51910//AtEMF2//ATEIF3E-1//GATA9//NINJA//ATML1//AGL78//IAA13//ZFP4//AT3G23740//AT3G03130//AT1G27900//AT1G36060//ATRPN1A//ATMPK1//AT2G01630//AT2G45120//ROL5 GO:0044267 cellular protein metabolic process BP 0.0289313144587089 YAB5//AT2G33170//AT1G58110//AT5G26830//AT5G66080//AT5G56040//AtEMF2//AT5G40030//UBQ9//ATEIF3E-1//ATUBP3//CST//CRK16//ATML1//ATSTE24//EDA8//AT3G23740//AT3G13310//PUB24//XXT5//AT1G10750//ATRPN1A//ATMPK1//AT1G61490//AT1G27190//AT2G42960//AT2G01630//ATCNGC6//ROL5 GO:0051716 cellular response to stimulus BP 0.0294920851463056 ACAM-3//AT1G58110//AT5G66330//AT5G56040//AT5G11250//ATEIF3E-1//AT3G45530//ATUBP3//CST//NINJA//AT4G26380//AtRBP-DR1//AT4G01910//AT4G01760//EDA8//DRT100//PUB24//AT1G27900//AT1G70550//ATGATL1//EDA10//ARAC5//ABCG36//ATMPK1//AT1G27190 GO:0019219 regulation of nucleobase-containing comp... BP 0.0296089836909005 YAB5//AT1G58110//AT5G51910//ATEIF3E-1//GATA9//NINJA//ATML1//AGL78//IAA13//ZFP4//AT3G23740//AT3G03130//AT1G27900//AT1G36060//ATMPK1//AT2G01630//AT2G45120//ROL5 GO:0010410 hemicellulose metabolic process BP 0.0298559243188698 AT1G27900//XXT5//AT1G70550//ATGATL1 GO:0080090 regulation of primary metabolic process BP 0.0307548579472125 YAB5//AT1G58110//AT5G51910//ATEIF3E-1//GATA9//NINJA//ATML1//AGL78//IAA13//ZFP4//AT3G23740//AT3G03130//AT1G27900//ABCG36//AT1G36060//ATRPN1A//ATMPK1//AT2G01630//AT2G45120//ROL5 GO:0071407 cellular response to organic cyclic comp... BP 0.0321720059099588 ATEIF3E-1//CST//AtRBP-DR1//PUB24//ATGATL1//ABCG36//ATMPK1 GO:0009612 response to mechanical stimulus BP 0.0327341455877508 AT1G58110//CST GO:0043412 macromolecule modification BP 0.0341311117561501 AT2G33170//AT1G58110//AT5G66080//AT5G56040//AtEMF2//AT5G40030//UBQ9//ATEIF3E-1//ATUBP3//CST//CRK16//ATML1//EDA8//AT3G23740//PUB24//XXT5//AT1G10750//ATMPK1//AT1G61490//AT1G27190//AT2G42960//AT2G01630//ATCNGC6//ROL5 GO:0051171 regulation of nitrogen compound metaboli... BP 0.0345170229361498 YAB5//AT1G58110//AT5G51910//ATEIF3E-1//GATA9//NINJA//ATML1//AGL78//IAA13//ZFP4//AT3G23740//AT3G03130//AT1G27900//AT1G36060//ATMPK1//AT2G01630//AT2G45120//ROL5 GO:0016571 histone methylation BP 0.0361984323403994 AtEMF2//AT3G23740//AT2G01630//ROL5 GO:0016226 iron-sulfur cluster assembly BP 0.0373525709242296 SUFE2//ATML1 GO:0031163 metallo-sulfur cluster assembly BP 0.0373525709242296 SUFE2//ATML1 GO:0043067 regulation of programmed cell death BP 0.0408514206674954 CST//PUB24//ATGATL1//ABCG36//BRG2//ATMPK1 GO:0009059 macromolecule biosynthetic process BP 0.0410386951608337 YAB5//AT2G33170//AT1G58110//AT5G26830//AT5G51910//ATEIF3E-1//ATUBP3//CST//GATA9//NINJA//ATML1//AGL78//IAA13//ZFP4//AT3G23740//PUB24//AT3G03130//AT1G27900//XXT5//AT1G70550//ATGATL1//ARAC5//AT1G10750//AT1G36060//ATMPK1//AT2G01630//AT2G45120//ATCNGC6//ROL5 GO:0008219 cell death BP 0.0412596935510779 CST//AtRBP-DR1//PUB24//ATGATL1//ABCG36//BRG2//ATMPK1 GO:0016265 death BP 0.0412596935510779 CST//AtRBP-DR1//PUB24//ATGATL1//ABCG36//BRG2//ATMPK1 GO:0052386 cell wall thickening BP 0.0422044287800494 ATGATL1//ABCG36 GO:0009626 plant-type hypersensitive response BP 0.0429783278872524 CST//AtRBP-DR1//PUB24//ATGATL1//ABCG36//ATMPK1 GO:0006479 protein methylation BP 0.0432637503624311 AtEMF2//AT3G23740//AT2G01630//ROL5 GO:0008213 protein alkylation BP 0.0432637503624311 AtEMF2//AT3G23740//AT2G01630//ROL5 GO:0005975 carbohydrate metabolic process BP 0.0436834413454737 AT2G33170//AT1G58110//AT5G26830//AT3G55430//ATUBP3//AT1G27900//UGE3//XXT5//AT1G70550//BGLU36//ATGATL1//ARAC5//ATRPN1A//ATGH9A2//CVL1//AT2G01630//ATCNGC6 GO:0034050 host programmed cell death induced by sy... BP 0.0437025743575946 CST//AtRBP-DR1//PUB24//ATGATL1//ABCG36//ATMPK1 GO:0051726 regulation of cell cycle BP 0.0454156014154826 EDA8//AT3G23740//AT3G03130//ATRPN1A GO:0010941 regulation of cell death BP 0.0459213885589126 CST//PUB24//ATGATL1//ABCG36//BRG2//ATMPK1 GO:0034645 cellular macromolecule biosynthetic proc... BP 0.0467659871090401 YAB5//AT2G33170//AT1G58110//AT5G26830//AT5G51910//ATEIF3E-1//ATUBP3//CST//GATA9//NINJA//ATML1//AGL78//IAA13//ZFP4//AT3G23740//PUB24//AT3G03130//AT1G27900//XXT5//AT1G70550//ATGATL1//AT1G10750//AT1G36060//ATMPK1//AT2G01630//AT2G45120//ATCNGC6//ROL5 GO:1902589 single-organism organelle organization BP 0.0503901569252878 AtEMF2//ARC1//AT3G23740//AT3G06480//AT1G27900//ARAC5//AT1G59910//ATMPK1//AT2G01630//ROL5 GO:0048609 multicellular organismal reproductive pr... BP 0.0516568533473042 ACBP//ATEIF3E-1//EDA8//ASE1//ROL5 GO:0016567 protein ubiquitination BP 0.0534122523471235 ATEIF3E-1//EDA8//PUB24//ROL5 GO:0009889 regulation of biosynthetic process BP 0.0536501969576894 YAB5//AT1G58110//AT5G51910//ATEIF3E-1//GATA9//NINJA//ATML1//AGL78//IAA13//ZFP4//AT3G23740//AT3G03130//ABCG36//AT1G36060//ATMPK1//AT2G01630//AT2G45120//ROL5 GO:0051052 regulation of DNA metabolic process BP 0.0541863380881456 AT3G23740//AT3G03130//AT1G27900 GO:0010383 cell wall polysaccharide metabolic proce... BP 0.0546134833857587 AT1G27900//XXT5//AT1G70550//ATGATL1 GO:0010556 regulation of macromolecule biosynthetic... BP 0.0554790356707217 YAB5//AT1G58110//AT5G51910//ATEIF3E-1//GATA9//NINJA//ATML1//AGL78//IAA13//ZFP4//AT3G23740//AT3G03130//AT1G36060//ATMPK1//AT2G01630//AT2G45120//ROL5 GO:2000112 regulation of cellular macromolecule bio... BP 0.0554790356707217 YAB5//AT1G58110//AT5G51910//ATEIF3E-1//GATA9//NINJA//ATML1//AGL78//IAA13//ZFP4//AT3G23740//AT3G03130//AT1G36060//ATMPK1//AT2G01630//AT2G45120//ROL5 GO:0010162 seed dormancy process BP 0.0574916045880422 ACBP//ATEIF3E-1//EDA8 GO:0022611 dormancy process BP 0.0574916045880422 ACBP//ATEIF3E-1//EDA8 GO:0019538 protein metabolic process BP 0.0591583048698288 YAB5//AT2G33170//AT1G58110//AT5G26830//AT5G66080//AT5G56040//AtEMF2//AT5G40030//UBQ9//ATEIF3E-1//AT3G52490//ATUBP3//CST//CRK16//ATML1//ATSTE24//EDA8//AT3G23740//AT3G13310//PUB24//XXT5//AT1G10750//ATRPN1A//ATMPK1//AT1G61490//AT1G27190//AT2G42960//AT2G01630//ATCNGC6//ROL5 GO:0032446 protein modification by small protein co... BP 0.0595645604567801 ATEIF3E-1//EDA8//PUB24//ROL5 GO:0009753 response to jasmonic acid BP 0.0598161491371665 CST//NINJA//PUB24//ATGATL1//ABCG36//ATMPK1 GO:0009751 response to salicylic acid BP 0.0607040735195803 CST//AtRBP-DR1//PUB24//ATGATL1//ABCG36//ATMPK1 GO:0031326 regulation of cellular biosynthetic proc... BP 0.0647991747627035 YAB5//AT1G58110//AT5G51910//ATEIF3E-1//GATA9//NINJA//ATML1//AGL78//IAA13//ZFP4//AT3G23740//AT3G03130//AT1G36060//ATMPK1//AT2G01630//AT2G45120//ROL5 GO:0014070 response to organic cyclic compound BP 0.0656074391393972 ATEIF3E-1//CST//AT4G03620//AtRBP-DR1//IAA13//PUB24//ATGATL1//ABCG36//ATMPK1 GO:0000003 reproduction BP 0.0674205148992545 ACBP//ATEIF3E-1//EDA8//AT1G27900//ATGATL1//ASE1//ROL5 GO:0071365 cellular response to auxin stimulus BP 0.0695702737994448 ABCG36//ATMPK1 GO:1901701 cellular response to oxygen-containing c... BP 0.0712326746879173 ATEIF3E-1//CST//NINJA//AtRBP-DR1//EDA8//PUB24//ATGATL1//ABCG36//ATMPK1 GO:0042430 indole-containing compound metabolic pro... BP 0.0716359384211394 CYP79A2//ATGATL1//ABCG36 GO:0044802 single-organism membrane organization BP 0.073963309890754 CST//ATML1//PUB24//ATGATL1//ABCG36//ATMPK1 GO:0016570 histone modification BP 0.0758004399476206 AtEMF2//AT3G23740//AT2G01630//ROL5 GO:0042493 response to drug BP 0.078661489304909 DRT100//ABCG36 GO:0019318 hexose metabolic process BP 0.0797876765102128 AT5G26830//ATUBP3//UGE3//XXT5//ATRPN1A GO:0048366 leaf development BP 0.0810070502456187 YAB5//ATML1//EDA8//ATGATL1//AtGRF3 GO:0010468 regulation of gene expression BP 0.081777367802283 YAB5//AT1G58110//AT5G51910//AtEMF2//ATEIF3E-1//GATA9//NINJA//ATML1//AGL78//IAA13//ZFP4//AT3G23740//AT1G36060//ATMPK1//AT2G01630//AT2G45120//ROL5 GO:0048583 regulation of response to stimulus BP 0.0837648869195158 AT5G51910//CST//AtRBP-DR1//PUB24//ATGATL1//EDA10//ABCG36//ATMPK1 GO:0006996 organelle organization BP 0.0843709327029245 YAB5//AT5G26830//AtEMF2//AT5G23250//ARC1//ATML1//AT3G23740//AT3G06480//AT1G27900//ARAC5//AT1G59910//ATRPN1A//ATMPK1//AT2G01630//ROL5 GO:0061024 membrane organization BP 0.084378432806231 CST//ATML1//PUB24//ATGATL1//ABCG36//ATMPK1 GO:0009755 hormone-mediated signaling pathway BP 0.0846349401646078 ATUBP3//CST//NINJA//PUB24//AT1G70550//ATGATL1//ABCG36//ATMPK1 GO:0006569 tryptophan catabolic process BP 0.084917724326522 CYP79A2//ATGATL1 GO:0046218 indolalkylamine catabolic process BP 0.084917724326522 CYP79A2//ATGATL1 GO:0010310 regulation of hydrogen peroxide metaboli... BP 0.0851668655910516 PUB24//ABCG36//ATMPK1 GO:0043543 protein acylation BP 0.0887630095519791 ATUBP3//CST//ATML1//PUB24//XXT5//AT1G10750 GO:0010431 seed maturation BP 0.0892202237818886 ACBP//ATEIF3E-1//EDA8 GO:0010363 regulation of plant-type hypersensitive ... BP 0.0898216254739866 CST//PUB24//ATGATL1//ABCG36//ATMPK1 GO:0031325 positive regulation of cellular metaboli... BP 0.0898216254739866 YAB5//SUFE2//ATEIF3E-1//GATA9//ROL5 GO:0071310 cellular response to organic substance BP 0.0912286034452682 ATEIF3E-1//ATUBP3//CST//NINJA//AtRBP-DR1//EDA8//PUB24//AT1G70550//ATGATL1//ABCG36//ATMPK1 GO:0007264 small GTPase mediated signal transductio... BP 0.0913196820129334 EDA10//ARAC5 GO:0043687 post-translational protein modification BP 0.0913196820129334 ATEIF3E-1//ROL5 GO:2000026 regulation of multicellular organismal d... BP 0.0924353578902629 AT5G56040//ACBP//AtEMF2//ATEIF3E-1//ATML1//EDA8//AtGRF3 GO:0006612 protein targeting to membrane BP 0.0937471917587627 CST//PUB24//ATGATL1//ABCG36//ATMPK1 GO:0044723 single-organism carbohydrate metabolic p... BP 0.0941549506902035 AT2G33170//AT1G58110//AT5G26830//ATUBP3//AT1G27900//UGE3//XXT5//AT1G70550//ATGATL1//ARAC5//ATRPN1A//CVL1//ATCNGC6 GO:0006275 regulation of DNA replication BP 0.0945725591731911 AT3G23740//AT3G03130 GO:0010413 glucuronoxylan metabolic process BP 0.095449814581121 AT1G27900//AT1G70550//ATGATL1 GO:0006790 sulfur compound metabolic process BP 0.0955716152539296 SUFE2//AT5G56040//CYP79A2//IAA13//ATGATL1//ABCG36 GO:0045492 xylan biosynthetic process BP 0.0975653195588921 AT1G27900//AT1G70550//ATGATL1 GO:0019915 lipid storage BP 0.0978586072704276 ATEIF3E-1//EDA8 GO:0050826 response to freezing BP 0.0978586072704276 ATEIF3E-1//EDA8 GO:0080135 regulation of cellular response to stres... BP 0.099117245615031 CST//PUB24//ATGATL1//ABCG36//ATMPK1