GOID	TERM	ONTOLOGY	pValue	Genes
GO:0001666	response to hypoxia	BP	0.000101313776318291	AT5G15120//ATSUS4//AT4G33560//FTM1//AHB1//ADH
GO:0010310	regulation of hydrogen peroxide metaboli...	BP	0.000104440909026322	RHF1A//AT5G15120//ATSUS4//AT4G33560//FTM1//AHB1//ADH
GO:0036293	response to decreased oxygen levels	BP	0.000120790703805281	AT5G15120//ATSUS4//AT4G33560//FTM1//AHB1//ADH
GO:0070482	response to oxygen levels	BP	0.000120790703805281	AT5G15120//ATSUS4//AT4G33560//FTM1//AHB1//ADH
GO:2000377	regulation of reactive oxygen species me...	BP	0.00024119518984241	RHF1A//AT5G15120//ATSUS4//AT4G33560//FTM1//AHB1//ADH
GO:0009862	systemic acquired resistance, salicylic ...	BP	0.000887752100602087	RHF1A//AT5G15120//ATSUS4//AT4G33560//FTM1//AHB1//ADH
GO:0072593	reactive oxygen species metabolic proces...	BP	0.00198417276569621	RHF1A//SRO5//AT5G15120//ATSUS4//AT4G33560//FTM1//AHB1//ADH
GO:0009863	salicylic acid mediated signaling pathwa...	BP	0.00218859517540207	RHF1A//AT5G15120//ATSUS4//AT4G33560//ATPK19//FTM1//AHB1//ADH
GO:0071446	cellular response to salicylic acid stim...	BP	0.00218859517540207	RHF1A//AT5G15120//ATSUS4//AT4G33560//ATPK19//FTM1//AHB1//ADH
GO:0010087	phloem or xylem histogenesis	BP	0.00253653090074942	AT5G15120//DOT4//FTM1//ATXTH27
GO:0042254	ribosome biogenesis	BP	0.00266869840594392	AT4G15770//EMB3136//AT5G28060//AT5G41190//FLN1//AT1G34030//AT3G13230//IMP4//EDA13
GO:0022613	ribonucleoprotein complex biogenesis	BP	0.00330711899581987	AT4G15770//EMB3136//AT5G28060//AT5G41190//FLN1//AT1G34030//AT3G13230//IMP4//EDA13
GO:0071229	cellular response to acid chemical	BP	0.00362863706356491	RHF1A//AT5G15120//ATPK10//ATSUS4//AT4G33560//ATPK19//AT3G10060//FTM1//LCR67//AHB1//ADH
GO:0042743	hydrogen peroxide metabolic process	BP	0.00374904756695047	RHF1A//AT5G15120//ATSUS4//AT4G33560//FTM1//AHB1//ADH
GO:0009627	systemic acquired resistance	BP	0.00378758613777932	RHF1A//AT5G15120//ATSUS4//AT4G33560//AT4G26910//FTM1//AHB1//ADH
GO:0006950	response to stress	BP	0.00397639774348779	RHF1A//AtRLP6//ATSPX1//SRO5//ATFKBP65//ATTTG1//ATORC3//AT5G15120//ATFTSH6//COP13//ANN6//ATSUS4//ACO1//AT4G33560//AT4G26910//AT4G24820//AT4G19530//DDB1A//AtCRL1//AT4G10270//AT1G16850//AT3G28200//AT3G12050//BCAT4//ATPK19//AT3G10060//MPPalpha//FTM1//AT1G02670//ATPAE1//LCR67//AT1G24010//AHB1//AT2G21640//ADH//ATPMM
GO:0006364	rRNA processing	BP	0.00400426005510827	EMB3136//AT5G28060//AT5G41190//FLN1//AT3G13230//IMP4//EDA13
GO:0016072	rRNA metabolic process	BP	0.00413671434134415	EMB3136//AT5G28060//AT5G41190//FLN1//AT3G13230//IMP4//EDA13
GO:0009751	response to salicylic acid	BP	0.00735813185796549	RHF1A//AT5G15120//ATSUS4//AT4G33560//ATPK19//FTM1//AHB1//ADH
GO:0009061	anaerobic respiration	BP	0.00868334564571345	AT5G15120//APT5
GO:1901701	cellular response to oxygen-containing c...	BP	0.0096779353792108	RHF1A//AT5G15120//COP13//ATPK10//ATSUS4//AT4G33560//ATPK19//AT3G10060//FTM1//LCR67//AHB1//ADH
GO:0000413	protein peptidyl-prolyl isomerization	BP	0.0117870044481411	ATFKBP65//AT3G10060
GO:0009814	defense response, incompatible interacti...	BP	0.0124873202364255	RHF1A//AT5G15120//ATSUS4//AT4G33560//AT4G26910//FTM1//AHB1//ADH
GO:0045087	innate immune response	BP	0.0134675309322988	RHF1A//ATTTG1//AT5G15120//ATSUS4//AT4G33560//AT4G26910//AT4G19530//ATPK19//FTM1//AHB1//ADH
GO:0006101	citrate metabolic process	BP	0.0134947740777194	ACO1//AT4G26910
GO:0034470	ncRNA processing	BP	0.0139836359083957	EMB3136//AT5G28060//AT5G41190//FLN1//AT3G13230//IMP4//EDA13
GO:0006955	immune response	BP	0.0143520883707973	RHF1A//ATTTG1//AT5G15120//ATSUS4//AT4G33560//AT4G26910//AT4G19530//ATPK19//FTM1//AHB1//ADH
GO:0000469	cleavage involved in rRNA processing	BP	0.0153029460251961	AT5G41190//IMP4
GO:0045333	cellular respiration	BP	0.0167236497416574	AT5G15120//APT5//AT4G26910//ADH
GO:0090501	RNA phosphodiester bond hydrolysis	BP	0.0172089119920408	AT5G41190//IMP4
GO:0051604	protein maturation	BP	0.0185382331603437	COP13//AT3G46210//AT4G24820
GO:0072350	tricarboxylic acid metabolic process	BP	0.0192101108383816	ACO1//AT4G26910
GO:0018208	peptidyl-proline modification	BP	0.0213040278431131	ATFKBP65//AT3G10060
GO:0015980	energy derivation by oxidation of organi...	BP	0.0219132720190398	AT5G15120//APT5//AT4G26910//ADH
GO:0071407	cellular response to organic cyclic comp...	BP	0.0247642620450934	RHF1A//AT5G15120//ATSUS4//AT4G33560//ATPK19//FTM1//AHB1//ADH
GO:0002238	response to molecule of fungal origin	BP	0.0257601851727271	AT3G03270//AT2G47710
GO:0009408	response to heat	BP	0.0271027243663744	ATFKBP65//ATFTSH6//ANN6//AtCRL1//AT3G12050//ATPK19
GO:0006626	protein targeting to mitochondrion	BP	0.0279899106734859	AT4G15770//AT3G49320//AT3G46210//AT3G22660
GO:0070585	protein localization to mitochondrion	BP	0.0279899106734859	AT4G15770//AT3G49320//AT3G46210//AT3G22660
GO:0072655	establishment of protein localization to...	BP	0.0279899106734859	AT4G15770//AT3G49320//AT3G46210//AT3G22660
GO:0006091	generation of precursor metabolites and ...	BP	0.0282329661382647	EMB3136//AT5G15120//APT5//AtFBA4//ACO1//AT4G26910//ATPAE1//ADH//ATPMM
GO:0009451	RNA modification	BP	0.0304556163536531	AT4G15770//EMB3136//AT3G46210//AT4G19530//AT1G34030//AT3G22660//IMP4
GO:0002376	immune system process	BP	0.031057592630027	RHF1A//ATTTG1//AT5G15120//ATSUS4//AT4G33560//AT4G26910//AT4G19530//ATPK19//FTM1//AHB1//ADH
GO:0009628	response to abiotic stimulus	BP	0.0322400878940951	SRO5//ATFKBP65//AT5G15120//ATFTSH6//COP13//ANN6//ATSUS4//ACO1//AT4G33560//AT4G24820//AT4G24110//AT4G19530//DDB1A//AtCRL1//AT1G16850//AT3G12050//BCAT4//LWD2//ATPK19//AT3G10060//FTM1//ATPAE1//AHB1//PRIN2//ADH//ATPMM
GO:0034660	ncRNA metabolic process	BP	0.0378208712909469	EMB3136//AT5G28060//AT5G41190//FLN1//AT3G13230//IMP4//EDA13
GO:0001510	RNA methylation	BP	0.0401876397061149	AT4G15770//AT3G46210//AT1G34030//AT3G22660//IMP4
GO:0043414	macromolecule methylation	BP	0.0457398528098699	AT4G15770//AT5G64150//COP13//AT3G46210//AT1G34030//AT3G22660//IMP4//DECOY
GO:1901700	response to oxygen-containing compound	BP	0.0459669478545563	RHF1A//SRO5//ATFKBP65//AT5G15120//ATFTSH6//COP13//ANN6//ATPK10//AT3G55430//ATSUS4//ACO1//AT4G33560//AtCRL1//AT3G12050//ATPK19//AT3G10060//FTM1//LCR67//AHB1//ADH
GO:0007005	mitochondrion organization	BP	0.0465741556325225	AT4G15770//AT3G49320//AT3G46210//AT3G22660
GO:0009553	embryo sac development	BP	0.048002214757439	RHF1A//AT5G41190//COP13//AT4G02820//EDA13
GO:0032259	methylation	BP	0.0491708549504738	AT4G15770//AT5G64150//COP13//AT3G46210//AT1G34030//AT3G22660//IMP4//DECOY
GO:0006839	mitochondrial transport	BP	0.0600636429712814	AT4G15770//AT3G49320//AT3G46210//AT3G22660
GO:0001101	response to acid chemical	BP	0.0622863659162773	RHF1A//AT5G15120//ANN6//ATPK10//ATSUS4//AT4G33560//AtCRL1//ATPK19//AT3G10060//FTM1//LCR67//AHB1//ADH
GO:0042221	response to chemical	BP	0.0629587354579414	RHF1A//AtRLP6//SRO5//ATFKBP65//ATTTG1//AT5G15120//ATFTSH6//COP13//ANN6//ATPK10//AT3G55430//ATSUS4//ACO1//AT4G33560//AT4G24820//AT4G12410//AtCRL1//AT3G12050//ATPK19//AT3G03270//AT3G10060//MPPalpha//FTM1//ATPAE1//LCR67//AHB1//ADH//AT2G47710//ATPMM
GO:0006096	glycolytic process	BP	0.0675091062434026	AtFBA4//ACO1//ATPAE1//ATPMM
GO:0010089	xylem development	BP	0.0688603488761701	AT5G15120//FTM1
GO:0090626	plant epidermis morphogenesis	BP	0.0706158598804848	AtRLP6//EMB3136//AT4G24820//DDB1A
GO:0051716	cellular response to stimulus	BP	0.0714131624737659	RHF1A//AtRLP6//ATSPX1//ATFKBP65//ATTTG1//ATORC3//AT5G15120//COP13//ATPK10//ATSUS4//AT4G33560//AT4G26910//AT4G19530//DDB1A//AT3G12050//ATPK19//AT3G10060//CLE3//FTM1//AT1G02670//LCR67//AHB1//ADH//ATPMM
GO:0044085	cellular component biogenesis	BP	0.0720512544501077	AT4G15770//EMB3136//AT5G28060//AT5G41190//FLN1//AT4G24820//DDB1A//AT1G34030//AT3G13230//MPPalpha//IMP4//ATPAE1//EXL4//GXM3//EDA13
GO:0006952	defense response	BP	0.076007201111886	RHF1A//AtRLP6//ATTTG1//AT5G15120//ATSUS4//AT4G33560//AT4G26910//AT4G19530//ATPK19//FTM1//LCR67//AT1G24010//AHB1//ADH
GO:0009561	megagametogenesis	BP	0.0770465207438587	RHF1A//COP13//AT4G02820//EDA13
GO:0000338	protein deneddylation	BP	0.0773596844450982	COP13//AT4G24820//ATPAE1
GO:0010388	cullin deneddylation	BP	0.0773596844450982	COP13//AT4G24820//ATPAE1
GO:0009888	tissue development	BP	0.0785807867355342	AtRLP6//EMB3136//ATTTG1//AT5G15120//COP13//AT4G33560//AT4G24820//DOT4//DDB1A//FTM1//ATXTH27
GO:0010033	response to organic substance	BP	0.0848088230557325	RHF1A//AtRLP6//SRO5//ATTTG1//AT5G15120//COP13//ATPK10//AT3G55430//ATSUS4//AT4G33560//AT4G24820//AT4G12410//AtCRL1//ATPK19//AT3G03270//MPPalpha//FTM1//ATPAE1//LCR67//AHB1//ADH//AT2G47710
GO:0044257	cellular protein catabolic process	BP	0.0860486071576616	RHF1A//AT5G61940//ATFTSH6//AT4G24820//MPPalpha//ATPAE1//ATPMM
GO:0042793	transcription from plastid promoter	BP	0.0862796754639553	EMB3136//FLN1
GO:0008284	positive regulation of cell proliferatio...	BP	0.0899085726361614	DDB1A//AtSEC24A
GO:0010026	trichome differentiation	BP	0.0909239137588634	ATTTG1//AT4G24820//DDB1A
GO:0030163	protein catabolic process	BP	0.0962787622953459	RHF1A//AT5G61940//ATFTSH6//AT4G24820//MPPalpha//ATPAE1//ATPMM
GO:0009651	response to salt stress	BP	0.0980464870601914	SRO5//ANN6//ACO1//AT1G16850//ATPK19//ATPAE1//ADH//ATPMM
GO:0051704	multi-organism process	BP	0.100912938704161	RHF1A//AtRLP6//AT5G15120//COP13//ATSUS4//AT4G33560//AT4G26910//AT4G02820//ATPMEI2//AT3G03270//FTM1//EXL4//AT1G16360//AHB1//ADH//AT2G47710//EDA13
GO:0044724	single-organism carbohydrate catabolic p...	BP	0.102776144348953	AtFBA4//ACO1//ATPAE1//AtFYPP1//ATPMM
GO:0016482	cytoplasmic transport	BP	0.109447287863335	AT4G15770//AT5G41190//AT3G49320//AT3G46210//AT4G24820//AT4G24550//AT4G02820//AT3G22660//AtSEC24A
GO:0010498	proteasomal protein catabolic process	BP	0.113342896432355	RHF1A//AT4G24820//ATPAE1//ATPMM
GO:0090068	positive regulation of cell cycle proces...	BP	0.113590044486915	188_
GO:0006605	protein targeting	BP	0.118686053763498	AT4G15770//RHF1A//AT5G41190//ATTTG1//AT3G49320//AT3G46210//AT4G24550//AT4G02820//AT3G22660//ATPK19
GO:0016556	mRNA modification	BP	0.120415581088471	EMB3136//AT4G19530
GO:1902580	single-organism cellular localization	BP	0.1228606371902	AT4G15770//RHF1A//AT5G41190//ATTTG1//AT3G49320//AT3G46210//AT4G24550//AT4G02820//AT3G22660//ATPK19
GO:0016052	carbohydrate catabolic process	BP	0.124208777822239	AtFBA4//ACO1//ATPAE1//AtFYPP1//ATPMM
GO:0010100	negative regulation of photomorphogenesi...	BP	0.124219757368068	226_
GO:0019374	galactolipid metabolic process	BP	0.124391506739885	ATSPX1//ATSUS4
GO:0019375	galactolipid biosynthetic process	BP	0.124391506739885	ATSPX1//ATSUS4
GO:0048856	anatomical structure development	BP	0.124767495953714	RHF1A//AtRLP6//EMB3136//AT5G41190//ATTTG1//AT5G15120//COP13//FLN1//AT3G48140//AT4G33560//AT4G24820//DOT4//DDB1A//AT4G02820//EMB3120//LWD2//ICL//ATPMEI2//DECOY//FTM1//OTC//AtPERK7//EXL4//AT1G16360//ATXTH27//ADK//EDA13
GO:0006970	response to osmotic stress	BP	0.125825563692745	SRO5//ANN6//ACO1//AT1G16850//ATPK19//ATPAE1//ADH//ATPMM
GO:0009407	toxin catabolic process	BP	0.12600757617306	AT4G24820//BCAT4//AtFYPP1
GO:0090487	secondary metabolite catabolic process	BP	0.12600757617306	AT4G24820//BCAT4//AtFYPP1
GO:0010103	stomatal complex morphogenesis	BP	0.128398942788899	AtRLP6//EMB3136
GO:0006470	protein dephosphorylation	BP	0.131371632949034	AT4G17410//RHF1A//EMB3136
GO:0006886	intracellular protein transport	BP	0.132350058717217	AT4G15770//RHF1A//AT5G41190//ATTTG1//AT3G49320//AT3G46210//AT4G24550//AT4G02820//AT3G22660//ATPK19//AtSEC24A
GO:0050896	response to stimulus	BP	0.132709312867659	RHF1A//AtRLP6//ATSPX1//SRO5//ATFKBP65//ATTTG1//ATORC3//AT5G15120//ATFTSH6//COP13//ANN6//ATPK10//AT3G55430//ATSUS4//ACO1//AT4G33560//AT4G26910//AT4G24820//AT4G24110//AT4G19530//AT4G12410//DDB1A//AtCRL1//AT4G10270//AT1G16850//AT3G28200//AT3G12050//BCAT4//LWD2//ATPK19//AT3G03270//AT3G10060//MPPalpha//CLE3//FTM1//AT1G02670//ATPAE1//LCR67//AT1G24010//AHB1//PRIN2//AT2G21640//ADH//AT2G47710//ATPMM
GO:0009416	response to light stimulus	BP	0.134376846951895	ATFKBP65//ATFTSH6//COP13//ANN6//AT4G24820//AT4G19530//DDB1A//AT3G12050//BCAT4//LWD2//ATPAE1//PRIN2
GO:0009913	epidermal cell differentiation	BP	0.134723067524646	739_
GO:0030855	epithelial cell differentiation	BP	0.134723067524646	739_
GO:0034605	cellular response to heat	BP	0.134723067524646	657_
GO:0046112	nucleobase biosynthetic process	BP	0.134723067524646	413_
GO:0014070	response to organic cyclic compound	BP	0.135925692181179	RHF1A//AT5G15120//ATSUS4//AT4G33560//ATPK19//FTM1//AHB1//ADH
GO:0048584	positive regulation of response to stimu...	BP	0.13650313982302	ATSPX1//AT4G19530
GO:0051510	regulation of unidimensional cell growth	BP	0.13650313982302	AT4G24820//AtPERK7
GO:0048229	gametophyte development	BP	0.139488019292979	RHF1A//AT5G41190//COP13//AT4G02820//EXL4//EDA13