GOID	TERM	ONTOLOGY	pValue	Genes
GO:0006139	nucleobase-containing compound metabolic...	BP	0.00555563275671593	SVR7//AT5G09510//CRR42//AT5G52660//EMB2812//AT5G23250//ATHD2//AtHPR1//GUN4//PGR3//AT1G19200//AT1G13730//AT1G18060//MDO1//GATA1//ATERF-4//AT3G28900//AT1G77250//ADOF2//TRZ4//ECT6//TRX//AT3G06310//LGO//CDC48C//ATNTH2//AT1G35560//AT2G21580//ATMST1//ARP2//EDA13
GO:1901360	organic cyclic compound metabolic proces...	BP	0.00586318933880955	SVR7//AT5G09510//AT5G21100//CRR42//EPS1//AT5G52660//EMB2812//AT5G23250//ATHD2//AtHPR1//GUN4//ELL1//CST//PGR3//AT1G19200//AT1G13730//AT1G18060//MDO1//GATA1//ATERF-4//AT3G28900//AT1G77250//ADOF2//TRZ4//ECT6//TRX//AT3G06310//LGO//CDC48C//ATNTH2//AT1G65870//AT1G35560//AT2G21580//ATMST1//ARP2//EDA13//AGP16
GO:0006725	cellular aromatic compound metabolic pro...	BP	0.00860553542884202	SVR7//AT5G09510//CRR42//EPS1//AT5G52660//EMB2812//AT5G23250//ATHD2//AtHPR1//GUN4//CST//PGR3//AT1G19200//AT1G13730//AT1G18060//MDO1//GATA1//ATERF-4//AT3G28900//AT1G77250//ADOF2//TRZ4//ECT6//TRX//AT3G06310//LGO//CDC48C//ATNTH2//AT1G65870//AT1G35560//AT2G21580//ATMST1//ARP2//EDA13//AGP16
GO:0034641	cellular nitrogen compound metabolic pro...	BP	0.0119383176028108	SVR7//AT5G09510//CRR42//AT5G52660//EMB2812//AT5G23250//ATHD2//AtHPR1//ATAIH//GUN4//PGR3//AT1G19200//AT1G13730//AT1G18060//MDO1//GATA1//ATERF-4//AT3G28900//AT1G77250//ADOF2//TRZ4//ECT6//TRX//AT3G06310//LGO//CDC48C//ATNTH2//AT1G35560//AT2G21580//ATMST1//ARP2//EDA13//AGP16
GO:0090304	nucleic acid metabolic process	BP	0.0123537948605375	SVR7//AT5G09510//CRR42//AT5G52660//EMB2812//ATHD2//AtHPR1//GUN4//PGR3//AT1G19200//MDO1//GATA1//ATERF-4//AT3G28900//AT1G77250//ADOF2//TRZ4//ECT6//TRX//LGO//CDC48C//ATNTH2//AT1G35560//AT2G21580//ATMST1//EDA13
GO:0002218	activation of innate immune response	BP	0.0124813859584567	MOS2//ATERF-4
GO:0002253	activation of immune response	BP	0.0124813859584567	MOS2//ATERF-4
GO:0048584	positive regulation of response to stimu...	BP	0.0127534442971931	MOS2//ATERF-4//RHA2A
GO:0045089	positive regulation of innate immune res...	BP	0.0191702449267682	MOS2//ATERF-4
GO:0046483	heterocycle metabolic process	BP	0.0194596345473296	SVR7//AT5G09510//CRR42//AT5G52660//EMB2812//AT5G23250//ATHD2//AtHPR1//GUN4//PGR3//AT1G19200//AT1G13730//AT1G18060//MDO1//GATA1//ATERF-4//AT3G28900//AT1G77250//ADOF2//TRZ4//ECT6//TRX//AT3G06310//LGO//CDC48C//ATNTH2//AT1G35560//AT2G21580//ATMST1//ARP2//EDA13//AGP16
GO:0006807	nitrogen compound metabolic process	BP	0.0214177612334414	SVR7//AT5G09510//AT5G21100//CRR42//AT5G52660//EMB2812//AT5G23250//ATHD2//AtHPR1//ATAIH//GUN4//ROC1//PGR3//AT1G19200//AT1G13730//AT1G18060//MDO1//GATA1//ATERF-4//AT3G28900//AT1G77250//ADOF2//TRZ4//ECT6//TRX//AT3G06310//LGO//CDC48C//ATNTH2//AT1G35560//AT2G21580//ATMST1//ARP2//EDA13//AGP16
GO:0002684	positive regulation of immune system pro...	BP	0.0221831636776087	MOS2//ATERF-4
GO:0031349	positive regulation of defense response	BP	0.0221831636776087	MOS2//ATERF-4
GO:0050778	positive regulation of immune response	BP	0.0221831636776087	MOS2//ATERF-4
GO:0009742	brassinosteroid mediated signaling pathw...	BP	0.0253780776950741	BSK2//ROC1
GO:0043401	steroid hormone mediated signaling pathw...	BP	0.0253780776950741	BSK2//ROC1
GO:0048545	response to steroid hormone	BP	0.0253780776950741	BSK2//ROC1
GO:0071367	cellular response to brassinosteroid sti...	BP	0.0253780776950741	BSK2//ROC1
GO:0071383	cellular response to steroid hormone sti...	BP	0.0253780776950741	BSK2//ROC1
GO:0009664	plant-type cell wall organization	BP	0.0265529066016013	PGR3//AT1G01300//PG2//ARP2
GO:0006275	regulation of DNA replication	BP	0.0287480468964675	EMB2812//LGO
GO:0060255	regulation of macromolecule metabolic pr...	BP	0.0395023004865987	SVR7//AT5G52660//EMB2812//ATHD2//AtHPR1//GUN4//ROC1//AT1G19200//GATA1//ATERF-4//AT1G77250//ADOF2//TRX//LGO//CDC48C//AT1G35560
GO:0010557	positive regulation of macromolecule bio...	BP	0.0401740858486333	SVR7//ATHD2//GUN4//TRX//LGO//CDC48C
GO:0010556	regulation of macromolecule biosynthetic...	BP	0.0412969358136253	SVR7//AT5G52660//EMB2812//ATHD2//GUN4//AT1G19200//GATA1//ATERF-4//AT1G77250//ADOF2//TRX//LGO//CDC48C//AT1G35560
GO:2000112	regulation of cellular macromolecule bio...	BP	0.0412969358136253	SVR7//AT5G52660//EMB2812//ATHD2//GUN4//AT1G19200//GATA1//ATERF-4//AT1G77250//ADOF2//TRX//LGO//CDC48C//AT1G35560
GO:0031328	positive regulation of cellular biosynth...	BP	0.0413015681765191	SVR7//ATHD2//GUN4//TRX//LGO//CDC48C
GO:0006813	potassium ion transport	BP	0.0418254575124808	ATKCO2//ATKEA3
GO:0016070	RNA metabolic process	BP	0.0428442554176045	SVR7//AT5G09510//CRR42//AT5G52660//ATHD2//AtHPR1//GUN4//PGR3//AT1G19200//GATA1//ATERF-4//AT3G28900//AT1G77250//ADOF2//TRZ4//ECT6//TRX//CDC48C//AT1G35560//AT2G21580//ATMST1//EDA13
GO:0010604	positive regulation of macromolecule met...	BP	0.0448042164249371	SVR7//ATHD2//GUN4//TRX//LGO//CDC48C
GO:0000272	polysaccharide catabolic process	BP	0.0459020022236603	PGR3//PG2
GO:0031325	positive regulation of cellular metaboli...	BP	0.0472402368726294	SVR7//ATHD2//GUN4//TRX//LGO//CDC48C
GO:0031326	regulation of cellular biosynthetic proc...	BP	0.0485773542996386	SVR7//AT5G52660//EMB2812//ATHD2//GUN4//AT1G19200//GATA1//ATERF-4//AT1G77250//ADOF2//TRX//LGO//CDC48C//AT1G35560
GO:0001510	RNA methylation	BP	0.0492884659719789	AT5G09510//ATHD2//AT3G28900//AT2G21580
GO:0006261	DNA-dependent DNA replication	BP	0.0566930424265596	EMB2812//LGO
GO:0043687	post-translational protein modification	BP	0.0589483043540777	ATHD2//CDC48C
GO:0009612	response to mechanical stimulus	BP	0.0612342911100987	CST//AT3G04640
GO:0048518	positive regulation of biological proces...	BP	0.0623436486460346	SAG201//SVR7//ATHD2//GUN4//MOS2//ATERF-4//TRX//LGO//CDC48C//RHA2A
GO:0046777	protein autophosphorylation	BP	0.0625192833180996	PGR3//ATKEA3//ATSNF4
GO:0010629	negative regulation of gene expression	BP	0.0676322028524942	ATHD2//AtHPR1//AT1G19200//ATERF-4//CDC48C
GO:0048509	regulation of meristem development	BP	0.0682867859491109	PGR3//AT1G35560//PG2
GO:0019219	regulation of nucleobase-containing comp...	BP	0.0698742833079364	AT5G52660//EMB2812//ATHD2//GUN4//AT1G19200//GATA1//ATERF-4//AT1G77250//ADOF2//TRX//LGO//CDC48C//AT1G35560
GO:0051052	regulation of DNA metabolic process	BP	0.0706720545157054	EMB2812//LGO
GO:0071669	plant-type cell wall organization or bio...	BP	0.0777236142237464	PGR3//AT1G01300//PG2//ARP2
GO:0051171	regulation of nitrogen compound metaboli...	BP	0.0788114143963163	AT5G52660//EMB2812//ATHD2//GUN4//AT1G19200//GATA1//ATERF-4//AT1G77250//ADOF2//TRX//LGO//CDC48C//AT1G35560
GO:0006396	RNA processing	BP	0.0803196803379482	SVR7//AtHPR1//TRZ4//ECT6//CDC48C//ATMST1
GO:0048522	positive regulation of cellular process	BP	0.0804767807793596	SVR7//ATHD2//GUN4//TRX//LGO//CDC48C//RHA2A
GO:0000097	sulfur amino acid biosynthetic process	BP	0.0808521552671604	GUN4//ROC1//ADOF2//ECT6//ATMST1
GO:0006108	malate metabolic process	BP	0.0825099784779061	213_
GO:0009870	defense response signaling pathway, resi...	BP	0.0825099784779061	422_
GO:0006468	protein phosphorylation	BP	0.0829591869659054	BSK2//MEE62//ROC1//CST//PGR3//ATKEA3//ATSNF4//AT2G18890
GO:0009889	regulation of biosynthetic process	BP	0.0837759048902583	SVR7//AT5G52660//EMB2812//ATHD2//GUN4//AT1G19200//GATA1//ATERF-4//AT1G77250//ADOF2//TRX//LGO//CDC48C//AT1G35560
GO:0009451	RNA modification	BP	0.0869148098843945	AT5G09510//CRR42//ATHD2//AT3G28900//AT2G21580
GO:0043543	protein acylation	BP	0.0889878830456396	BSK2//CST//AT3G04640//ATUBP4//AT2G01790
GO:0045036	protein targeting to chloroplast	BP	0.0908246631912135	SVR7//TRX
GO:0072596	establishment of protein localization to...	BP	0.0908246631912135	SVR7//TRX
GO:0072598	protein localization to chloroplast	BP	0.0908246631912135	SVR7//TRX
GO:0009117	nucleotide metabolic process	BP	0.0908669882126703	AT5G23250//ATHD2//GUN4//PGR3//AT1G13730//AT1G18060//AT3G06310//ARP2
GO:0031323	regulation of cellular metabolic process	BP	0.0909419259363392	SVR7//AT5G52660//EMB2812//ATHD2//GUN4//ROC1//AT1G19200//GATA1//ATERF-4//AT1G77250//ADOF2//TRX//LGO//CDC48C//AT1G35560
GO:0006753	nucleoside phosphate metabolic process	BP	0.0916071440464413	AT5G23250//ATHD2//GUN4//PGR3//AT1G13730//AT1G18060//AT3G06310//ARP2
GO:0080090	regulation of primary metabolic process	BP	0.0919306249362426	SVR7//AT5G52660//EMB2812//ATHD2//GUN4//ROC1//AT1G19200//GATA1//ATERF-4//AT1G77250//ADOF2//TRX//LGO//CDC48C//AT1G35560
GO:0045935	positive regulation of nucleobase-contai...	BP	0.0932115783734892	ATHD2//GUN4//TRX//LGO//CDC48C
GO:0051173	positive regulation of nitrogen compound...	BP	0.0953619340434645	ATHD2//GUN4//TRX//LGO//CDC48C
GO:0009682	induced systemic resistance	BP	0.0981855800502889	053_
GO:0009789	positive regulation of abscisic acid-act...	BP	0.0981855800502889	590_
GO:0009958	positive gravitropism	BP	0.0981855800502889	677_
GO:0032875	regulation of DNA endoreduplication	BP	0.0981855800502889	919_
GO:0090329	regulation of DNA-dependent DNA replicat...	BP	0.0981855800502889	919_
GO:0010605	negative regulation of macromolecule met...	BP	0.101965306343891	ATHD2//AtHPR1//AT1G19200//ATERF-4//CDC48C
GO:0009058	biosynthetic process	BP	0.10250533865128	SVR7//UGT84A1//AT5G09510//AT5G21100//EPS1//AT5G52660//EMB2812//BSK2//AT5G23250//ATHD2//ATAIH//GUN4//ELL1//ROC1//CST//PGR3//AT1G19200//AT1G13730//AT1G18060//MDO1//GATA1//ATERF-4//AT3G28900//mMDH2//AT1G77250//ADOF2//ECT6//TRX//AT3G06310//LGO//CDC48C//AT1G71070//AT1G65870//AT1G35560//ATUBP4//AT2G21580//ATMST1//PG2//ARP2//AT2G01790//AGP16
GO:1901698	response to nitrogen compound	BP	0.103322994757721	AT2G41640//AtHPR1//AT3G59080//PME1//ATERF-4//AT3G04640//CDC48C
GO:0010628	positive regulation of gene expression	BP	0.104216684731907	SVR7//ATHD2//GUN4//TRX//CDC48C
GO:0006284	base-excision repair	BP	0.105923804188333	255_
GO:0071483	cellular response to blue light	BP	0.105923804188333	973_s_
GO:1901421	positive regulation of response to alcoh...	BP	0.105923804188333	590_
GO:0009723	response to ethylene	BP	0.107183168810404	AT5G52660//ATERF-4//AT3G04640//AT1G05710
GO:0048316	seed development	BP	0.10815335748619	MEE62//ATHD2//ATAIH//ELL1//CDC48C//ATMST1
GO:0009891	positive regulation of biosynthetic proc...	BP	0.111183738856748	SVR7//ATHD2//GUN4//TRX//LGO//CDC48C
GO:0055086	nucleobase-containing small molecule met...	BP	0.111254475845416	AT5G23250//ATHD2//GUN4//PGR3//AT1G13730//AT1G18060//AT3G06310//ARP2
GO:0009741	response to brassinosteroid	BP	0.112425632392199	BSK2//ROC1
GO:0043170	macromolecule metabolic process	BP	0.113044475693465	SVR7//AT5G09510//CRR42//AT5G52660//EMB2812//BSK2//MEE62//ATHD2//AtHPR1//AT3G59080//GUN4//ROC1//CST//PGR3//ATKEA3//AT1G19200//MDO1//GATA1//ATERF-4//AT3G28900//AT1G77250//ADOF2//TRZ4//ECT6//TRX//AT3G04640//LGO//CDC48C//AT1G01300//ATNTH2//AT1G35560//RHA2A//ATUBP4//AT2G21580//ATMST1//PG2//ATSNF4//ARP2//AT2G01790//EDA13//AT2G18890//AT2G39710
GO:0006596	polyamine biosynthetic process	BP	0.113596385470204	570_
GO:0045787	positive regulation of cell cycle	BP	0.113596385470204	919_
GO:0048506	regulation of timing of meristematic pha...	BP	0.113596385470204	028_
GO:0048510	regulation of timing of transition from ...	BP	0.113596385470204	028_
GO:0043414	macromolecule methylation	BP	0.115842907031339	AT5G09510//ATHD2//AT3G28900//CDC48C//AT2G21580
GO:0010467	gene expression	BP	0.117729928585826	SVR7//AT5G09510//AT5G52660//ATHD2//AtHPR1//GUN4//AT1G19200//GATA1//ATERF-4//AT3G28900//AT1G77250//ADOF2//TRZ4//ECT6//TRX//CDC48C//AT1G35560//AT2G21580//ATMST1//ARP2
GO:0000096	sulfur amino acid metabolic process	BP	0.119448581361949	GUN4//ROC1//ADOF2//ECT6//ATMST1
GO:0009793	embryo development ending in seed dorman...	BP	0.119448581361949	MEE62//ATAIH//ELL1//CDC48C//ATMST1
GO:0006333	chromatin assembly or disassembly	BP	0.120841884856024	AT1G75140//AT3G09480
GO:0009873	ethylene-activated signaling pathway	BP	0.120841884856024	ATERF-4//AT3G04640
GO:0031123	RNA 3'-end processing	BP	0.12120387431938	051_
GO:0045727	positive regulation of translation	BP	0.12120387431938	494_
GO:0010468	regulation of gene expression	BP	0.121811828063848	SVR7//AT5G52660//ATHD2//AtHPR1//GUN4//AT1G19200//GATA1//ATERF-4//AT1G77250//ADOF2//TRX//CDC48C//AT1G35560
GO:0032259	methylation	BP	0.121881966766846	AT5G09510//ATHD2//AT3G28900//CDC48C//AT2G21580
GO:0030422	production of siRNA involved in RNA inte...	BP	0.123681490646729	AtHPR1//CDC48C
GO:0010154	fruit development	BP	0.123739242400462	MEE62//ATHD2//ATAIH//ELL1//CDC48C//ATMST1
GO:0008152	metabolic process	BP	0.124345722350806	SVR7//UGT84A1//AT5G09510//AT5G21100//CRR42//EPS1//AT5G52660//EMB2812//BSK2//MEE62//AT5G23250//ATHD2//AT5G11340//AtHPR1//ATAIH//AT5G02230//AT3G59080//GUN4//ELL1//ROC1//CST//PGR3//AT4G20840//ATKEA3//AT1G19200//AT1G13730//AT1G18060//MDO1//AT1G72030//GATA1//ATERF-4//AT3G28900//mMDH2//AT1G77250//HYR1//ADOF2//TRZ4//CYP72A8//ECT6//TRX//AT3G04640//AT3G06310//LGO//CDC48C//PIP5K2//AT1G71070//AT1G01300//ATNTH2//AT1G65870//AT1G35560//RHA2A//ATUBP4//AT2G21580//ATMST1//PG2//ATSNF4//ARP2//AT2G01790//EDA13//AGP16//AT2G18890//AT2G39710
GO:0019693	ribose phosphate metabolic process	BP	0.128075891114107	AT5G23250//ATHD2//GUN4//PGR3//AT1G18060//AT3G06310
GO:0042775	mitochondrial ATP synthesis coupled elec...	BP	0.128746816597815	881_
GO:0044249	cellular biosynthetic process	BP	0.132024071089392	SVR7//AT5G09510//AT5G21100//EPS1//AT5G52660//EMB2812//BSK2//AT5G23250//ATHD2//ATAIH//GUN4//ELL1//ROC1//CST//PGR3//AT1G19200//AT1G13730//MDO1//GATA1//ATERF-4//AT3G28900//mMDH2//AT1G77250//ADOF2//ECT6//TRX//AT3G06310//LGO//CDC48C//AT1G65870//AT1G35560//ATUBP4//AT2G21580//ATMST1//ARP2//AT2G01790//AGP16