GOID TERM ONTOLOGY pValue Genes GO:0016556 mRNA modification BP 7.4873041009825e-06 APO2//AT5G02710//AT3G56330//AT3G48200//AT1G17850//RPF1//PDE324//AT1G49010//AT1G60590//ABC4//AT2G46250 GO:0009451 RNA modification BP 3.95919302793009e-05 APO2//AT5G02710//AT3G56330//AT3G48200//AT1G17850//RPF1//AT3G28460//PDE324//AT1G49010//AT1G60590//ABC4//AT2G46250 GO:0090304 nucleic acid metabolic process BP 0.000345627955773662 AGL2//AT5G25590//tny//ESE3//AT5G65320//APO2//AT5G50110//AT5G42070//AT5G38750//GMI1//TDP1//AT5G08520//EMB2771//BTR1//AT5G02710//AT3G56330//AT3G48200//AHA4//AT3G43110//ATWRKY13//ANT//pde191//AT4G36050//MSI3//ABF3//AT4G31150//RH39//YAB3//AT1G17850//RPF1//ATDFO//HAF2//HUA1//AT3G28460//JMJ30//AtDRM3//PDE324//ATRECQ4B//BBX27//EMB3103//AtRLG1//AT1G49010//AT1G45150//AT1G44830//AT1G01760//ANAC014//PSF1//anac021//PTAC6//AT2G04790//DML1//AT1G70280//SPL10//DRB1//AT1G60590//ABC4//AT1G27220//AtPIF4//AT2G20400//PIF1//AT2G46250//EMB2795//AS1//ARF3 GO:0016071 mRNA metabolic process BP 0.000723927415061922 APO2//AT5G02710//AT3G56330//AT3G48200//AT1G17850//RPF1//PDE324//AT1G49010//DRB1//AT1G60590//ABC4//AT2G46250 GO:0010017 red or far-red light signaling pathway BP 0.000761725987823183 PKS4//AtPIF4//PIF1//ELF3 GO:0071489 cellular response to red or far red ligh... BP 0.000761725987823183 PKS4//AtPIF4//PIF1//ELF3 GO:0010016 shoot system morphogenesis BP 0.000811144335423946 AFO//AT5G42070//AGD3//AT3G48200//ANT//pde191//ATCLC-E//AT1G01080//anac021//PTAC6//AT2G04790//SPL10//ABC4//AT2G44830//AS1//ARF3 GO:0071478 cellular response to radiation BP 0.00137857650642224 PKS4//JK218//AtPIF4//PIF1//ELF3 GO:0071482 cellular response to light stimulus BP 0.00137857650642224 PKS4//JK218//AtPIF4//PIF1//ELF3 GO:0006139 nucleobase-containing compound metabolic... BP 0.0017625433537439 AGL2//AT5G25590//tny//ESE3//AT5G65320//APO2//AT5G50110//AT5G42070//AT5G38750//GMI1//TDP1//AT5G08520//EMB2771//BTR1//AT5G02710//AT3G56330//AT3G48200//AHA4//PEX11B//AT3G43110//ATWRKY13//ANT//pde191//AT4G36050//MSI3//ABF3//AT4G31150//RH39//YAB3//AT1G17850//RPF1//ATDFO//HAF2//HUA1//AT3G28460//JMJ30//AtDRM3//PDE324//ATRECQ4B//BBX27//EMB3103//AtRLG1//AT1G49010//AT1G45150//AT1G44830//AT1G01760//ANAC014//PSF1//anac021//PTAC6//AT2G04790//DML1//AT1G70280//SPL10//DRB1//AT1G60590//ABC4//AT1G27220//AtPIF4//AT2G20400//PIF1//AT2G46250//EMB2795//AS1//ARF3 GO:0016070 RNA metabolic process BP 0.00206129008552087 AGL2//AT5G25590//tny//ESE3//AT5G65320//APO2//AT5G50110//AT5G42070//AT5G38750//AT5G08520//BTR1//AT5G02710//AT3G56330//AT3G48200//AT3G43110//ATWRKY13//ANT//pde191//MSI3//ABF3//RH39//YAB3//AT1G17850//RPF1//HAF2//HUA1//AT3G28460//JMJ30//PDE324//BBX27//EMB3103//AtRLG1//AT1G49010//AT1G45150//AT1G44830//AT1G01760//ANAC014//anac021//PTAC6//AT2G04790//DML1//AT1G70280//SPL10//DRB1//AT1G60590//ABC4//AT1G27220//AtPIF4//AT2G20400//PIF1//AT2G46250//EMB2795//AS1//ARF3 GO:0009787 regulation of abscisic acid-activated si... BP 0.00245342613631008 SNRK2-3//ATFTA//ARAC8//GCR2 GO:0010089 xylem development BP 0.00261741294660654 AT5G14510//AGD3//AHA4//ANT//AT2G17850//AT2G44830 GO:1901419 regulation of response to alcohol BP 0.0028148374325922 SNRK2-3//ATFTA//ARAC8//GCR2 GO:0034641 cellular nitrogen compound metabolic pro... BP 0.00409650793661777 AGL2//AT5G25590//tny//ESE3//AT5G65320//APO2//PORA//AT5G50110//AT5G42070//AT5G38750//GMI1//TDP1//AT5G08520//EMB2771//BTR1//AT5G02710//AT3G56330//AT3G48200//AHA4//PEX11B//ATGSTU27//AT3G43110//ATWRKY13//ANT//pde191//AT4G36050//MSI3//ABF3//AT4G31150//RH39//YAB3//AT1G17850//RPF1//ATDFO//HAF2//HUA1//AT3G28460//JMJ30//AtDRM3//PDE324//ATRECQ4B//BBX27//EMB3103//AtRLG1//AT1G49010//AT1G45150//AT1G44830//AT1G01760//ANAC014//PSF1//anac021//PTAC6//AT2G04790//DML1//AT2G35820//AT1G70280//SPL10//DRB1//AT1G60590//ABC4//AT1G27220//AtPIF4//AT2G20400//PIF1//AT2G46250//EMB2795//AS1//ARF3 GO:0071214 cellular response to abiotic stimulus BP 0.00468355621027077 PKS4//JK218//AtOCT5//AtPIF4//PIF1//ELF3 GO:0048532 anatomical structure arrangement BP 0.00496878886287028 AFO//AtMAN7//AT5G14510//AGD3//ANT//MSI3//anac021//SPL10//AT2G44830 GO:0046483 heterocycle metabolic process BP 0.00557440485314436 AGL2//AT5G25590//tny//ESE3//AT5G65320//APO2//PORA//AT5G50110//AT5G42070//AT5G38750//GMI1//TDP1//AT5G08520//EMB2771//BTR1//AT5G02710//AT3G56330//AT3G48200//AHA4//PEX11B//AT3G43110//ATWRKY13//ANT//pde191//AT4G36050//MSI3//ABF3//AT4G31150//RH39//YAB3//AT1G17850//RPF1//ATDFO//HAF2//HUA1//AT3G28460//JMJ30//AtDRM3//PDE324//ATRECQ4B//BBX27//EMB3103//AtRLG1//AT1G49010//AT1G45150//AT1G44830//AT1G01760//ANAC014//PSF1//anac021//PTAC6//AT2G04790//DML1//AT2G35820//AT1G70280//SPL10//DRB1//AT1G60590//ABC4//AT1G27220//AtPIF4//AT2G20400//PIF1//AT2G46250//EMB2795//AS1//ARF3 GO:0010087 phloem or xylem histogenesis BP 0.00688077434551659 AT5G14510//AGD3//AHA4//ANT//AT2G17850//AT2G44830 GO:0003002 regionalization BP 0.00722287857171665 AFO//AGL2//AtMAN7//AGD3//ANT//DRB1//AT2G44830//AS1//ARF3 GO:0009944 polarity specification of adaxial/abaxia... BP 0.00734661282235081 AFO//AtMAN7//AGD3//ANT//AS1 GO:0065001 specification of axis polarity BP 0.00734661282235081 AFO//AtMAN7//AGD3//ANT//AS1 GO:0009943 adaxial/abaxial axis specification BP 0.00790271728827861 AFO//AtMAN7//AGD3//ANT//AS1 GO:0009955 adaxial/abaxial pattern specification BP 0.00848742611360212 AFO//AtMAN7//AGD3//ANT//AS1 GO:0009798 axis specification BP 0.0104201064547628 AFO//AtMAN7//AGD3//ANT//AS1 GO:1901360 organic cyclic compound metabolic proces... BP 0.0105030588610668 AGL2//AT5G25590//tny//ESE3//AT5G65320//APO2//PORA//AT5G50110//AT5G42070//AT5G38750//GMI1//TDP1//AT5G08520//EMB2771//BTR1//AT5G02710//AT3G56330//AT3G48200//AHA4//PEX11B//AT3G43110//ATWRKY13//ANT//pde191//AT4G36050//MSI3//ABF3//AT4G31150//RH39//YAB3//AT1G17850//RPF1//ATDFO//CYP90D1//HAF2//HUA1//AT3G28460//JMJ30//AtDRM3//PDE324//ATRECQ4B//BBX27//EMB3103//AtRLG1//AT1G49010//AT1G45150//AT1G44830//AT1G01760//ANAC014//PSF1//anac021//PTAC6//AT2G04790//DML1//AT2G35820//ATLUP1//AT1G70280//SPL10//AT1G09500//DRB1//AT1G60590//ABC4//AT1G27220//AtPIF4//AT2G20400//PIF1//AT2G46250//EMB2795//AS1//ARF3 GO:0006399 tRNA metabolic process BP 0.0111260949314499 AT5G38750//AT3G56330//RH39//AT3G28460//AtRLG1 GO:0009966 regulation of signal transduction BP 0.0111260949314499 SNRK2-3//ATFTA//ARAC8//GCR2//AtPIF4 GO:0023051 regulation of signaling BP 0.0111260949314499 SNRK2-3//ATFTA//ARAC8//GCR2//AtPIF4 GO:0009739 response to gibberellin BP 0.0112654539515087 ESE3//SNRK2-3//AT5G50915//ARAC8//AT1G49010//PIF1//AS1 GO:0044767 single-organism developmental process BP 0.0113601479609834 AFO//AGL2//LNG1//AT5G25590//ESE3//SNRK2-3//AtMAN7//JK218//SLK2//APO2//AT5G57170//THE1//AT5G42070//AT5G37870//TDP1//AT5G14510//AGD3//EMB2771//ATFTA//AT3G59070//AT3G48200//ARAC8//AT3G45540//ANT//pde191//AT4G36050//ATCLC-E//MSI3//AT4G21323//YAB3//ATEXP8//CYP90D1//AT2G37950//HUA1//AT3G26720//AT3G28460//ATRECQ4B//GCR2//AT1G01080//ANAC014//anac021//EDA17//PTAC6//AT1G03010//AT2G04790//AT2G35820//PDF1//SPL10//DRB1//AT2G17850//ABC4//AtPIF4//AT2G20400//PIF1//AT2G44830//ELF3//EMB2795//AS1//ARF3 GO:0010051 xylem and phloem pattern formation BP 0.0118640509656495 AGD3//ANT//DRB1//AT2G44830//ARF3 GO:0006865 amino acid transport BP 0.0121899708862106 CML41//AT1G67640//AtOCT5//AT2G43930 GO:0010646 regulation of cell communication BP 0.0126346041339031 SNRK2-3//ATFTA//ARAC8//GCR2//AtPIF4 GO:0006725 cellular aromatic compound metabolic pro... BP 0.0126426248099726 AGL2//AT5G25590//tny//ESE3//AT5G65320//APO2//PORA//AT5G50110//AT5G42070//AT5G38750//GMI1//TDP1//AT5G08520//EMB2771//BTR1//AT5G02710//AT3G56330//AT3G48200//AHA4//PEX11B//AT3G43110//ATWRKY13//ANT//pde191//AT4G36050//MSI3//ABF3//AT4G31150//RH39//YAB3//AT1G17850//RPF1//ATDFO//HAF2//HUA1//AT3G28460//JMJ30//AtDRM3//PDE324//ATRECQ4B//BBX27//EMB3103//AtRLG1//AT1G49010//AT1G45150//AT1G44830//AT1G01760//ANAC014//PSF1//anac021//PTAC6//AT2G04790//DML1//AT1G70280//SPL10//AT1G09500//DRB1//AT1G60590//ABC4//AT1G27220//AtPIF4//AT2G20400//PIF1//AT2G46250//EMB2795//AS1//ARF3 GO:0007275 multicellular organismal development BP 0.012924704797643 AFO//AGL2//LNG1//AT5G25590//ESE3//SNRK2-3//AtMAN7//JK218//SLK2//APO2//THE1//AT5G42070//AT5G37870//TDP1//AT5G14510//AGD3//EMB2771//ATFTA//AT3G59070//AT3G48200//ARAC8//AT3G45540//ANT//pde191//AT4G36050//ATCLC-E//MSI3//YAB3//CYP90D1//AT2G37950//AT3G26720//AT3G28460//ATRECQ4B//GCR2//AT1G01080//ANAC014//anac021//EDA17//PTAC6//AT2G04790//AT2G35820//PDF1//SPL10//DRB1//ABC4//AtPIF4//AT2G20400//PIF1//AT2G44830//ELF3//EMB2795//AS1//ARF3 GO:0032502 developmental process BP 0.0129863316461217 AFO//AGL2//LNG1//AT5G25590//ESE3//SNRK2-3//AtMAN7//JK218//SLK2//APO2//AT5G57170//THE1//AT5G42070//AT5G37870//TDP1//AT5G14510//AGD3//EMB2771//ATFTA//AT3G59070//AT3G48200//ARAC8//AHA4//AT3G45540//ANT//pde191//AT4G36050//ATCLC-E//MSI3//AT4G21323//YAB3//ATEXP8//CYP90D1//AT2G37950//HUA1//AT3G26720//AT3G28460//ATRECQ4B//GCR2//AT1G01080//ANAC014//anac021//EDA17//PTAC6//AT1G03010//AT2G04790//AT2G35820//PDF1//SPL10//DRB1//AT2G17850//ABC4//AtPIF4//AT2G20400//PIF1//AT2G44830//ELF3//EMB2795//AS1//ARF3 GO:0009933 meristem structural organization BP 0.0143211695759559 AFO//AtMAN7//AT5G14510//AGD3//ANT//MSI3//anac021//AT2G44830 GO:0048507 meristem development BP 0.0146362819020492 AFO//AGL2//LNG1//AtMAN7//AT5G14510//AGD3//ATFTA//ANT//MSI3//anac021//PDF1//SPL10//AT2G44830 GO:0044707 single-multicellular organism process BP 0.0150418452515611 AFO//AGL2//LNG1//AT5G25590//ESE3//SNRK2-3//AtMAN7//JK218//SLK2//APO2//THE1//AT5G42070//AT5G37870//TDP1//AT5G14510//AGD3//EMB2771//ATFTA//AT3G59070//AT3G48200//ARAC8//AT3G45540//ANT//pde191//AT4G36050//ATCLC-E//MSI3//YAB3//CYP90D1//AT2G37950//AT3G26720//AT3G28460//ATRECQ4B//GCR2//AT1G01080//ANAC014//anac021//EDA17//PTAC6//AT2G04790//AT2G35820//PDF1//SPL10//DRB1//ABC4//AtPIF4//AT2G20400//PIF1//AT2G44830//ELF3//EMB2795//AS1//ARF3 GO:0097306 cellular response to alcohol BP 0.0154948967605106 SNRK2-3//THE1//ATFTA//ARAC8//ABF3//GCR2 GO:0006807 nitrogen compound metabolic process BP 0.0166265662355046 AGL2//AT5G25590//tny//ESE3//AT5G65320//APO2//PORA//AT5G50110//AT5G42070//AT5G38750//GMI1//TDP1//AT5G13980//AT5G08520//EMB2771//BTR1//AT5G02710//AT3G56330//AT3G48200//AHA4//PEX11B//ATGSTU27//AT3G43110//ATWRKY13//ANT//pde191//AT4G36050//MSI3//ABF3//AT4G31150//RH39//YAB3//AT1G17850//RPF1//ATDFO//HAF2//HUA1//AT3G28460//JMJ30//AtDRM3//PDE324//ATRECQ4B//BBX27//EMB3103//AtRLG1//AT1G49010//AT1G45150//AT1G44830//AT1G01760//ANAC014//PSF1//anac021//PTAC6//AT2G04790//DML1//AT2G35820//AT1G70280//SPL10//DRB1//AT1G60590//ABC4//AT1G27220//AtPIF4//AT2G20400//PIF1//AT2G46250//EMB2795//AS1//ARF3 GO:0045165 cell fate commitment BP 0.0166351243363117 AFO//YAB3//HUA1//ARF3 GO:0009653 anatomical structure morphogenesis BP 0.0176611493551001 AFO//AGL2//LNG1//AT5G25590//AtMAN7//JK218//AT5G57170//THE1//AT5G42070//AT5G14510//AGD3//EMB2771//ATFTA//AT3G48200//AT3G45540//ANT//pde191//ATCLC-E//MSI3//AT4G21323//ATEXP8//AT3G26720//AT1G01080//anac021//PTAC6//AT1G03010//AT2G04790//SPL10//ABC4//AT2G44830//ELF3//AS1//ARF3 GO:0071396 cellular response to lipid BP 0.0178035537261082 ESE3//SNRK2-3//THE1//ATFTA//ARAC8//ABF3//GCR2//PIF1 GO:0009638 phototropism BP 0.0184040235158421 PKS4//JK218 GO:0033993 response to lipid BP 0.0190796171638524 AFO//ESE3//SNRK2-3//THE1//AT5G50915//ATFTA//ARAC8//ABF3//AT2G37950//GCR2//AT1G49010//DRB1//PIF1//ELF3//AS1 GO:1901701 cellular response to oxygen-containing c... BP 0.0199543199530405 ESE3//SNRK2-3//THE1//ATFTA//ARAC8//MSI3//ABF3//EX1//GCR2//AtOCT5//AT2G17850//AtPIF4//PIF1 GO:0010014 meristem initiation BP 0.0213457174904766 AtMAN7//AT5G14510//AGD3//ANT//anac021//AT2G44830 GO:0022604 regulation of cell morphogenesis BP 0.0219795793648642 LNG1//THE1//EMB2771//ATFTA GO:0048439 flower morphogenesis BP 0.0219795793648642 AGD3//ANT//AT2G44830//ARF3 GO:0080167 response to karrikin BP 0.0219795793648642 ATC/VIF2//EXL3//ATGSTU27//AT1G53070 GO:0009791 post-embryonic development BP 0.0222808591606149 AFO//AGL2//AT5G25590//ESE3//SNRK2-3//AtMAN7//SLK2//APO2//THE1//TDP1//AGD3//EMB2771//AT3G48200//ARAC8//AT3G45540//ANT//pde191//AT4G36050//ATCLC-E//MSI3//CYP90D1//AT3G28460//ATRECQ4B//GCR2//AT1G01080//ANAC014//anac021//AT2G35820//ABC4//AtPIF4//PIF1//AT2G44830//ELF3//EMB2795//ARF3 GO:0050793 regulation of developmental process BP 0.0226707775141848 AFO//AGL2//LNG1//AT5G25590//SNRK2-3//AtMAN7//THE1//AGD3//EMB2771//ATFTA//ANT//MSI3//PDF1//SPL10//PIF1//ELF3//EMB2795 GO:0007020 microtubule nucleation BP 0.023461233142969 EXL3//AT5G13980//ARC1//AT1G62330 GO:0009725 response to hormone BP 0.0237474373369984 AFO//ESE3//SNRK2-3//THE1//PORA//AT5G50915//AGD3//ATFTA//ARAC8//ABF3//RHA1A//AT1G48690//AT2G37950//GCR2//AT1G49010//anac021//AT1G64710//DRB1//AtPIF4//PIF1//ELF3//AS1//ARF3 GO:0009733 response to auxin BP 0.0238998294291328 AGD3//AT1G48690//AT1G49010//anac021//DRB1//AtPIF4//ELF3//AS1//ARF3 GO:0009738 abscisic acid-activated signaling pathwa... BP 0.0246299151661685 SNRK2-3//ATFTA//ARAC8//ABF3//GCR2 GO:0015849 organic acid transport BP 0.0250021768476071 CML41//AT1G67640//AtOCT5//AT2G43930 GO:0046942 carboxylic acid transport BP 0.0250021768476071 CML41//AT1G67640//AtOCT5//AT2G43930 GO:0006949 syncytium formation BP 0.0262441109797981 AT5G57170//ATEXP8 GO:0016226 iron-sulfur cluster assembly BP 0.0266028556593593 AFO//APO2//pde191//AT3G28460 GO:0031163 metallo-sulfur cluster assembly BP 0.0266028556593593 AFO//APO2//pde191//AT3G28460 GO:0009965 leaf morphogenesis BP 0.0270467558342662 AT5G42070//AGD3//ANT//PTAC6//AT2G04790//SPL10//AS1 GO:0048731 system development BP 0.0271457181883004 AFO//AGL2//LNG1//AT5G25590//ESE3//AtMAN7//JK218//SLK2//APO2//AT5G42070//AT5G14510//AGD3//EMB2771//ATFTA//AT3G48200//ARAC8//AT3G45540//ANT//pde191//AT4G36050//ATCLC-E//MSI3//YAB3//CYP90D1//AT3G26720//AT3G28460//ATRECQ4B//GCR2//AT1G01080//anac021//PTAC6//AT2G04790//AT2G35820//PDF1//SPL10//ABC4//PIF1//AT2G44830//ELF3//EMB2795//AS1//ARF3 GO:0009615 response to virus BP 0.0274232264325407 TDP1//AT3G28460//ANAC014//DRB1//AS1//ARF3 GO:0009855 determination of bilateral symmetry BP 0.0298435957319405 AtMAN7//AGD3//ANT//AT2G44830//ARF3 GO:0042180 cellular ketone metabolic process BP 0.0298435957319405 AtLpxK//AtLpxB//ABC4//PMDH1//GGPS2 GO:0046785 microtubule polymerization BP 0.0299849415682138 EXL3//AT5G13980//ARC1//AT1G62330 GO:0048367 shoot system development BP 0.0301193183069436 AFO//AGL2//AT5G25590//SLK2//AT5G42070//AGD3//EMB2771//AT3G48200//AT3G45540//ANT//pde191//ATCLC-E//MSI3//CYP90D1//AT1G01080//anac021//PTAC6//AT2G04790//SPL10//ABC4//AT2G44830//ELF3//EMB2795//AS1//ARF3 GO:0032501 multicellular organismal process BP 0.0302845983682912 AFO//AGL2//LNG1//AT5G25590//ESE3//SNRK2-3//AtMAN7//JK218//SLK2//APO2//THE1//AT5G42070//AT5G37870//TDP1//AT5G14510//AGD3//EMB2771//ATFTA//AT3G59070//AT3G48200//ARAC8//AT3G45540//ANT//pde191//AT4G36050//ATCLC-E//MSI3//AT4G21323//YAB3//CYP90D1//AT2G37950//AT3G26720//AT3G28460//ATRECQ4B//GCR2//AT1G01080//ANAC014//anac021//EDA17//PTAC6//AT1G03010//AT2G04790//AT2G35820//PDF1//SPL10//DRB1//ABC4//AtPIF4//AT2G20400//PIF1//AT2G44830//ELF3//EMB2795//AS1//ARF3 GO:0009799 specification of symmetry BP 0.0312475440399725 AtMAN7//AGD3//ANT//AT2G44830//ARF3 GO:0009886 post-embryonic morphogenesis BP 0.0320970312226671 AFO//AGL2//AT5G25590//AGD3//AT3G48200//AT3G45540//ANT//pde191//ATCLC-E//AT1G01080//ABC4//AT2G44830//ARF3 GO:0009887 organ morphogenesis BP 0.0320970312226671 AFO//AGL2//AT5G25590//AT5G42070//AGD3//AT3G45540//ANT//PTAC6//AT2G04790//SPL10//AT2G44830//AS1//ARF3 GO:0071215 cellular response to abscisic acid stimu... BP 0.0326923077466309 SNRK2-3//ATFTA//ARAC8//ABF3//GCR2 GO:0010103 stomatal complex morphogenesis BP 0.0332869108250628 AFO//AT3G48200//pde191//ATCLC-E//AT1G01080//ABC4 GO:0031109 microtubule polymerization or depolymeri... BP 0.0336100298980405 EXL3//AT5G13980//ARC1//AT1G62330 GO:0070417 cellular response to cold BP 0.0351852994935151 ATRECQ4B//AtOCT5 GO:0015711 organic anion transport BP 0.0355142752765414 CML41//AT1G67640//AtOCT5//AT2G43930 GO:0090305 nucleic acid phosphodiester bond hydroly... BP 0.0355142752765414 EMB2771//AHA4//ATDFO//DRB1 GO:0071229 cellular response to acid chemical BP 0.0365636226838725 ESE3//SNRK2-3//ATFTA//ARAC8//ABF3//GCR2//AtOCT5//AT2G17850//AtPIF4//PIF1 GO:0009719 response to endogenous stimulus BP 0.0392687659253857 AFO//ESE3//SNRK2-3//THE1//PORA//AT5G50915//AGD3//ATFTA//ARAC8//ABF3//RHA1A//AT1G48690//AT2G37950//GCR2//AT1G49010//anac021//AT1G64710//DRB1//AtPIF4//PIF1//ELF3//AS1//ARF3 GO:0007389 pattern specification process BP 0.0400002771283592 AFO//AGL2//AtMAN7//AGD3//ANT//DRB1//AT2G44830//AS1//ARF3 GO:0009954 proximal/distal pattern formation BP 0.0400351820147415 DRB1//AS1 GO:0042752 regulation of circadian rhythm BP 0.0400351820147415 JMJ30//ELF3 GO:0048519 negative regulation of biological proces... BP 0.0400688924943302 AT5G25590//ATC/VIF2//AGD3//ATFTA//ARAC8//AT3G43110//ANT//MSI3//AT4G21323//AT3G28460//AT1G45150//DML1//DRB1//AtPIF4//PIF1//AT2G44830//EMB2795//AS1//ARF3 GO:0090626 plant epidermis morphogenesis BP 0.0445882178469744 AFO//AGD3//AT3G48200//pde191//ATCLC-E//AT3G26720//AT1G01080//ABC4 GO:0050789 regulation of biological process BP 0.0457405460049097 AFO//PKS4//AGL2//LNG1//AT5G25590//tny//ESE3//SNRK2-3//AtMAN7//AT5G65320//ATC/VIF2//JK218//APO2//THE1//AT5G54020//AT5G42070//AGD3//AT5G08520//EMB2771//BTR1//ATFTA//AT3G48200//ARAC8//AHA4//AT3G43110//ATWRKY13//ANT//pde191//MSI3//ABF3//AT4G21323//AT4G04340//YAB3//HUA1//AT3G26720//SRF4//AT3G28460//JMJ30//AtDRM3//PDE324//AtRLP14//GCR2//BBX27//EMB3103//AT1G45150//AT1G44830//ANAC014//anac021//PTAC6//AT1G64710//AT2G04790//DML1//PDF1//SPL10//DRB1//AT2G17850//AT1G27220//AtPIF4//AT2G20400//PIF1//PMDH1//AT2G44830//ELF3//EMB2795//AS1//ARF3 GO:0006281 DNA repair BP 0.047916007722476 GMI1//TDP1//EMB2771//AT4G36050//AT4G31150//ATRECQ4B//DML1 GO:0051258 protein polymerization BP 0.0488921457707475 EXL3//AT5G13980//AGD3//ARC1//AT3G26720//AT1G62330 GO:0009825 multidimensional cell growth BP 0.0529590828146829 LNG1//tny//JK218//ATEXP8 GO:0031326 regulation of cellular biosynthetic proc... BP 0.0532023917351821 AGL2//AT5G25590//tny//ESE3//AT5G65320//AT5G42070//AT5G08520//EMB2771//AT3G43110//ATWRKY13//ANT//pde191//ABF3//YAB3//HUA1//AT3G28460//JMJ30//PDE324//BBX27//EMB3103//AT1G45150//AT1G44830//ANAC014//anac021//PTAC6//AT2G04790//DML1//SPL10//AT1G27220//AtPIF4//AT2G20400//PIF1//PMDH1//EMB2795//AS1//ARF3 GO:0035670 plant-type ovary development BP 0.0532886014696777 AFO//AGL2//SLK2//EMB2771//pde191 GO:0048481 ovule development BP 0.0532886014696777 AFO//AGL2//SLK2//EMB2771//pde191 GO:0001708 cell fate specification BP 0.0538361246542892 AFO//YAB3//ARF3 GO:0006355 regulation of transcription, DNA-templat... BP 0.0553260757685084 AGL2//AT5G25590//tny//ESE3//AT5G65320//AT5G42070//AT5G08520//AT3G43110//ATWRKY13//ANT//pde191//ABF3//YAB3//HUA1//AT3G28460//JMJ30//PDE324//BBX27//EMB3103//AT1G45150//AT1G44830//ANAC014//anac021//PTAC6//AT2G04790//DML1//SPL10//AT1G27220//AtPIF4//AT2G20400//PIF1//EMB2795//AS1//ARF3 GO:1903506 regulation of nucleic acid-templated tra... BP 0.0553260757685084 AGL2//AT5G25590//tny//ESE3//AT5G65320//AT5G42070//AT5G08520//AT3G43110//ATWRKY13//ANT//pde191//ABF3//YAB3//HUA1//AT3G28460//JMJ30//PDE324//BBX27//EMB3103//AT1G45150//AT1G44830//ANAC014//anac021//PTAC6//AT2G04790//DML1//SPL10//AT1G27220//AtPIF4//AT2G20400//PIF1//EMB2795//AS1//ARF3 GO:2001141 regulation of RNA biosynthetic process BP 0.0553260757685084 AGL2//AT5G25590//tny//ESE3//AT5G65320//AT5G42070//AT5G08520//AT3G43110//ATWRKY13//ANT//pde191//ABF3//YAB3//HUA1//AT3G28460//JMJ30//PDE324//BBX27//EMB3103//AT1G45150//AT1G44830//ANAC014//anac021//PTAC6//AT2G04790//DML1//SPL10//AT1G27220//AtPIF4//AT2G20400//PIF1//EMB2795//AS1//ARF3 GO:0009788 negative regulation of abscisic acid-act... BP 0.0559511501573656 ATFTA//ARAC8 GO:1901420 negative regulation of response to alcoh... BP 0.0559511501573656 ATFTA//ARAC8