GOID	TERM	ONTOLOGY	pValue	Genes
GO:0010311	lateral root formation	BP	0.00245313229467774	AtTIR1//SRD2//IAA8//AtAUX1
GO:0002238	response to molecule of fungal origin	BP	0.00490468661470694	AT5G35380//AT5G14680//AT3G20200//LOV1
GO:0010101	post-embryonic root morphogenesis	BP	0.00861884529434141	AtTIR1//SRD2//IAA8//AtAUX1
GO:0010102	lateral root morphogenesis	BP	0.00861884529434141	AtTIR1//SRD2//IAA8//AtAUX1
GO:0016310	phosphorylation	BP	0.0221188572108321	NAD4L//ATMKK9//AT5G35380//CIPK25//AT5G59650//ABI2//MOL1//PAS2//ATB'//AT5G02070//BSK10//AT3G55550//ATPUB13//AT3G45670//AGC1-2//AT4G24480//ATCIPK8//CRK23//AtRLP46//CRK36//ATMEK4//AT3G20200//ANAC055//ATGSK1//CRK1//WAK3//AT2G43700//AT1G76110//AT1G80870//ATCLV1//CYCB2;1//AT2G21480//AT2G36570//AT2G28590//AT2G41930
GO:0071368	cellular response to cytokinin stimulus	BP	0.0269293728950883	SRD2//ARR3//AtGH9B7//IAA8
GO:0015849	organic acid transport	BP	0.0284595440682133	AtGDU7//AT5G02170//AT3G59630//ATNHD1//MNS3//YSL7//IMPA-4//AT1G61890//AtAUX1
GO:0046942	carboxylic acid transport	BP	0.0284595440682133	AtGDU7//AT5G02170//AT3G59630//ATNHD1//MNS3//YSL7//IMPA-4//AT1G61890//AtAUX1
GO:0046520	sphingoid biosynthetic process	BP	0.0288969209624791	AT5G64500//ATSMO1//AT2G05755
GO:0006468	protein phosphorylation	BP	0.0300154144054084	ATMKK9//AT5G35380//CIPK25//AT5G59650//ABI2//MOL1//PAS2//AT5G02070//BSK10//AT3G55550//ATPUB13//AT3G45670//AGC1-2//AT4G24480//ATCIPK8//CRK23//CRK36//AT3G20200//ATGSK1//CRK1//WAK3//AT2G43700//AT1G80870//ATCLV1//CYCB2;1//AT2G21480//AT2G36570//AT2G28590//AT2G41930
GO:0044106	cellular amine metabolic process	BP	0.0301805389575558	ATMKK9//AT3G56580//PLDGAMMA3//cm-3//ATSDC1//ATMYC2
GO:0046519	sphingoid metabolic process	BP	0.0323243830121609	AT5G64500//ATSMO1//AT2G05755
GO:0006505	GPI anchor metabolic process	BP	0.0332142299686064	AT5G17670//AT4G34310
GO:0031540	regulation of anthocyanin biosynthetic p...	BP	0.0332142299686064	AT5G38320//CRC
GO:0043622	cortical microtubule organization	BP	0.0332142299686064	PLP3b//AAA1
GO:0048645	organ formation	BP	0.0351405813943282	ATRMI1//AtTIR1//CYP78A5//CRC//SRD2//IAA8//AtAUX1//HB-3
GO:0009735	response to cytokinin	BP	0.0374764566078371	SRD2//ARR3//AtGH9B7//IAA8//HB-3
GO:0006865	amino acid transport	BP	0.0379930289454208	AtGDU7//AT5G02170//AT3G59630//MNS3//YSL7//IMPA-4//AT1G61890//AtAUX1
GO:0010152	pollen maturation	BP	0.0398192260989232	AtTIR1//AFB2
GO:0031122	cytoplasmic microtubule organization	BP	0.0398192260989232	PLP3b//AAA1
GO:0042325	regulation of phosphorylation	BP	0.0425898737268687	ABI2//PAS2//ATB'//CYCB2;1
GO:0006730	one-carbon metabolic process	BP	0.0468720669373268	ATDFB//ACA1
GO:0048527	lateral root development	BP	0.04690126321624	AtTIR1//SRD2//IAA8//ARABIDILLO-1//AtAUX1
GO:0009308	amine metabolic process	BP	0.0490069049316381	ATMKK9//AT3G56580//PLDGAMMA3//ATIPT8//cm-3//ATSDC1//ATMYC2
GO:0016192	vesicle-mediated transport	BP	0.0497583343667112	ATIWS1//DGL1//AT5G43560//AT3G60260//ATPUB13//ATEXO70G1//ACBP2//ATEXO70E1//AT3G05000//MNS3//AT1G33900//anac017//IMPA-4//ATECA3//AT1G51160//AT2G05590
GO:0070647	protein modification by small protein co...	BP	0.0514577674708167	EIF2//CSN6A//AT5G42200//AT5G37930//ATBP-1//XBAT33//ATL4//ATPUB13//AT1G71020//MAX2//ATSAE2//AT2G03200
GO:0030148	sphingolipid biosynthetic process	BP	0.0524509122956511	AT5G64500//ATSMO1//AT2G05755
GO:0030865	cortical cytoskeleton organization	BP	0.0543408581683897	PLP3b//AAA1
GO:0000398	mRNA splicing, via spliceosome	BP	0.055354418513966	BGAL14//AT3G03970//ATEIF3G1//At-SR34
GO:0015711	organic anion transport	BP	0.0565511899161325	AtGDU7//AT5G02170//AT3G59630//ATNHD1//MNS3//YSL7//IMPA-4//AT1G61890//AtAUX1
GO:0006888	ER to Golgi vesicle-mediated transport	BP	0.0624276544869153	ACBP2//MNS3//IMPA-4//AT1G51160
GO:0048528	post-embryonic root development	BP	0.063450988150207	AtTIR1//SRD2//IAA8//ARABIDILLO-1//AtAUX1
GO:0009630	gravitropism	BP	0.0661231853155065	AT5G43560//IAA30//AT1G77800//SNL5//ATIDD15//AtAUX1
GO:0000375	RNA splicing, via transesterification re...	BP	0.0661344170447214	BGAL14//AT3G03970//ATEIF3G1//At-SR34
GO:0000377	RNA splicing, via transesterification re...	BP	0.0661344170447214	BGAL14//AT3G03970//ATEIF3G1//At-SR34
GO:0006576	cellular biogenic amine metabolic proces...	BP	0.0664909911701436	ATMKK9//PLDGAMMA3//cm-3//ATSDC1//ATMYC2
GO:0009620	response to fungus	BP	0.0688201291726666	PGN//AT5G35380//CIPK25//GLIP1//AT5G38900//AT5G14680//RRTF1//CRK36//ATMEK4//AT3G20200//ANAC055//LOV1//ATMYC2
GO:0006487	protein N-linked glycosylation	BP	0.069610975221914	ATIWS1//DGL1//ATPUB13//MNS3//AT1G07990
GO:0006357	regulation of transcription from RNA pol...	BP	0.0704060512341441	GCT//ATMYC2
GO:0016126	sterol biosynthetic process	BP	0.0715069432574907	AT5G64500//AtDWF4//SQE3//ATSMO1//AtGH9B7//AT2G05755
GO:0006643	membrane lipid metabolic process	BP	0.0742907557000875	AT5G64500//AT5G17670//AT4G34310//CRK36//ATSMO1//AT2G05755
GO:0009629	response to gravity	BP	0.0742907557000875	AT5G43560//IAA30//AT1G77800//SNL5//ATIDD15//AtAUX1
GO:0048364	root development	BP	0.0756638235071737	PAS2//ATDFB//AtTIR1//IAA30//ATPUB13//ATCIPK8//MNS3//ATMYC2//SRD2//AtGH9B7//ATECA3//IAA8//ARABIDILLO-1//AtAUX1
GO:0022622	root system development	BP	0.0772140979892913	PAS2//ATDFB//AtTIR1//IAA30//ATPUB13//ATCIPK8//MNS3//ATMYC2//SRD2//AtGH9B7//ATECA3//IAA8//ARABIDILLO-1//AtAUX1
GO:0006904	vesicle docking involved in exocytosis	BP	0.0789458263046539	ATEXO70G1//ATEXO70E1
GO:0040034	regulation of development, heterochronic	BP	0.0789458263046539	SPL2//GCT
GO:0048278	vesicle docking	BP	0.0789458263046539	ATEXO70G1//ATEXO70E1
GO:0016125	sterol metabolic process	BP	0.0830081025665998	AT5G64500//AtDWF4//SQE3//ATSMO1//AtGH9B7//AT2G05755
GO:0006887	exocytosis	BP	0.0877881866904742	ATEXO70G1//ATEXO70E1
GO:0022406	membrane docking	BP	0.0877881866904742	ATEXO70G1//ATEXO70E1
GO:0097164	ammonium ion metabolic process	BP	0.0877881866904742	PLDGAMMA3//ATSDC1
GO:0006413	translational initiation	BP	0.088404458819715	EIF2//AT5G44320//ATEIF3G1
GO:0002237	response to molecule of bacterial origin	BP	0.0906842379100794	AtTIR1//ATEXO70E1//AtRLP36//AFB2
GO:0009926	auxin polar transport	BP	0.0906842379100794	SRD2//AtGH9B7//MAX2//AtAUX1
GO:0009606	tropism	BP	0.0922693617160041	AT5G43560//IAA30//AT1G77800//SNL5//ATIDD15//AtAUX1
GO:0050832	defense response to fungus	BP	0.0935049735584383	PGN//CIPK25//GLIP1//AT5G38900//RRTF1//CRK36//ATMEK4//ANAC055//LOV1
GO:0060918	auxin transport	BP	0.0997121917291276	SRD2//AtGH9B7//MAX2//AtAUX1
GO:0009736	cytokinin-activated signaling pathway	BP	0.100164065283722	ARR3//AtGH9B7//IAA8
GO:0043207	response to external biotic stimulus	BP	0.102898667439536	PGN//ATIWS1//AT5G35380//CIPK25//GLIP1//AT5G38900//AT5G24620//AT5G14680//AtDIP2//AtTIR1//ATPUB13//RRTF1//AtRLP46//CRK36//ATMEK4//ATEXO70E1//AT3G20200//AtRLP36//AFB2//ANAC055//ACP//AT1G33930//AT1G33900//cm-3//LOV1//ATMYC2//AT1G76110//MAX2//IMPA-4//AtAUX1
GO:0051707	response to other organism	BP	0.102898667439536	PGN//ATIWS1//AT5G35380//CIPK25//GLIP1//AT5G38900//AT5G24620//AT5G14680//AtDIP2//AtTIR1//ATPUB13//RRTF1//AtRLP46//CRK36//ATMEK4//ATEXO70E1//AT3G20200//AtRLP36//AFB2//ANAC055//ACP//AT1G33930//AT1G33900//cm-3//LOV1//ATMYC2//AT1G76110//MAX2//IMPA-4//AtAUX1
GO:0009607	response to biotic stimulus	BP	0.104092625471463	PGN//ATIWS1//AT5G35380//CIPK25//GLIP1//AT5G38900//AT5G24620//AT5G14680//AtDIP2//AtTIR1//ATPUB13//RRTF1//AtRLP46//CRK36//ATMEK4//ATEXO70E1//AT3G20200//AtRLP36//AFB2//ANAC055//ACP//AT1G33930//AT1G33900//cm-3//LOV1//ATMYC2//AT1G76110//MAX2//IMPA-4//AtAUX1
GO:0009914	hormone transport	BP	0.104376879705645	SRD2//AtGH9B7//MAX2//AtAUX1
GO:0006397	mRNA processing	BP	0.105103855755016	BGAL14//AT3G03970//ATEIF3G1//ATCPSF30//At-SR34
GO:0006665	sphingolipid metabolic process	BP	0.106266956316108	AT5G64500//ATSMO1//AT2G05755
GO:0008284	positive regulation of cell proliferatio...	BP	0.106266956316108	AT5G43560//CYP78A5//HB-3
GO:0048646	anatomical structure formation involved ...	BP	0.108371821012587	ATRMI1//AtTIR1//CYP78A5//AT3G23770//CRC//SRD2//IAA8//AtAUX1//HB-3
GO:0048443	stamen development	BP	0.10888835409643	SPL2//AtTIR1//AtRLP36//AFB2//CRC//AtGH9B7
GO:0048466	androecium development	BP	0.10888835409643	SPL2//AtTIR1//AtRLP36//AFB2//CRC//AtGH9B7
GO:0006333	chromatin assembly or disassembly	BP	0.109139484296649	MEE57//CRC//ATSMO1//AT1G76110
GO:0006464	cellular protein modification process	BP	0.109477543591246	ATMKK9//AtbZIP68//ATIWS1//EIF2//AT5G35380//CIPK25//DGL1//AT5G59650//ABI2//CSN6A//MOL1//AT5G42200//AT5G37930//ATBP-1//PAS2//AT5G07910//XBAT33//AT5G02070//BSK10//ATCBG//ATL4//AT3G59630//AT3G55550//ATPUB13//AT3G45670//AGC1-2//AT4G24480//ATCIPK8//CRK23//AtRLP46//CRK36//ATMEK4//AT3G20200//ATGSK1//CRK1//WAK3//AT1G71020//MNS3//AT2G43700//AT1G07990//ATCPNIFS//AT1G76110//AT1G80870//ATCLV1//CYCB2;1//MAX2//ATSAE2//AT2G21480//AT2G36570//AT2G28590//IMPA-4//SDG23//AT2G03200//AT2G41930
GO:0036211	protein modification process	BP	0.109477543591246	ATMKK9//AtbZIP68//ATIWS1//EIF2//AT5G35380//CIPK25//DGL1//AT5G59650//ABI2//CSN6A//MOL1//AT5G42200//AT5G37930//ATBP-1//PAS2//AT5G07910//XBAT33//AT5G02070//BSK10//ATCBG//ATL4//AT3G59630//AT3G55550//ATPUB13//AT3G45670//AGC1-2//AT4G24480//ATCIPK8//CRK23//AtRLP46//CRK36//ATMEK4//AT3G20200//ATGSK1//CRK1//WAK3//AT1G71020//MNS3//AT2G43700//AT1G07990//ATCPNIFS//AT1G76110//AT1G80870//ATCLV1//CYCB2;1//MAX2//ATSAE2//AT2G21480//AT2G36570//AT2G28590//IMPA-4//SDG23//AT2G03200//AT2G41930
GO:0097306	cellular response to alcohol	BP	0.110972119957707	ATIWS1//ABI2//VTC5//CRK36//ATMEK4//ANAC055//ATGSK1//ATMYC2//ATM1
GO:0048509	regulation of meristem development	BP	0.112385685078998	SPL2//CYP78A5//ATCLV1//AtGH9B7//MAX2//HB-3
GO:0031537	regulation of anthocyanin metabolic proc...	BP	0.115886084130989	AT5G38320//CRC
GO:0010410	hemicellulose metabolic process	BP	0.115939635367635	ARAC2//AT3G54190//XCP1//XXT4//AT1G51160//AT2G03200
GO:0001932	regulation of protein phosphorylation	BP	0.125404421526996	ABI2//PAS2//CYCB2;1
GO:0032446	protein modification by small protein co...	BP	0.125672723716493	AT5G42200//AT5G37930//XBAT33//ATL4//ATPUB13//AT1G71020//MAX2//ATSAE2
GO:0010092	specification of organ identity	BP	0.135702581279899	CRC//HB-3
GO:0010093	specification of floral organ identity	BP	0.135702581279899	CRC//HB-3
GO:0032870	cellular response to hormone stimulus	BP	0.144560289489176	ATMKK9//ATIWS1//ABI2//VTC5//GLIP1//AtTIR1//AtDWF4//AtRLP46//CRK36//ATMEK4//ANAC055//ATGSK1//ATMYC2//AT1G76110//SRD2//ARR3//AtGH9B7//IAA8//ATM1
GO:0019220	regulation of phosphate metabolic proces...	BP	0.149938991491529	ABI2//PAS2//ATB'//AtRLP46//ATMEK4//AT1G76110//CYCB2;1
GO:0051174	regulation of phosphorus metabolic proce...	BP	0.149938991491529	ABI2//PAS2//ATB'//AtRLP46//ATMEK4//AT1G76110//CYCB2;1
GO:0048569	post-embryonic organ development	BP	0.150594587902128	AT1G46696//ATRMI1//SPL2//AtTIR1//CYP78A5//ATMEK4//AtRLP36//AFB2//AT1G68420//CRC//SRD2//AtGH9B7//IAA8//ARABIDILLO-1//AtAUX1//HB-3
GO:0071495	cellular response to endogenous stimulus	BP	0.152282857832653	ATMKK9//ATIWS1//ABI2//VTC5//GLIP1//AtTIR1//AtDWF4//AtRLP46//CRK36//ATMEK4//ANAC055//ATGSK1//ATMYC2//AT1G76110//SRD2//ARR3//AtGH9B7//IAA8//ATM1
GO:0006366	transcription from RNA polymerase II pro...	BP	0.15265271402458	GCT//ATMYC2//AT1G75510
GO:0006568	tryptophan metabolic process	BP	0.15265271402458	ATMKK9//cm-3//ATMYC2
GO:0006586	indolalkylamine metabolic process	BP	0.15265271402458	ATMKK9//cm-3//ATMYC2
GO:0001933	negative regulation of protein phosphory...	BP	0.15619729128527	ABI2//PAS2
GO:0031400	negative regulation of protein modificat...	BP	0.15619729128527	ABI2//PAS2
GO:0042326	negative regulation of phosphorylation	BP	0.15619729128527	ABI2//PAS2
GO:0048193	Golgi vesicle transport	BP	0.157159982094602	ATIWS1//DGL1//AT5G43560//ATPUB13//ACBP2//MNS3//IMPA-4//ATECA3//AT1G51160
GO:0009753	response to jasmonic acid	BP	0.160992344028416	VTC5//AT5G52660//AtDWF4//SQE3//AtRLP46//CRK36//ATMEK4//ANAC055//ATMYC2//AT1G76110//AT1G61890//AT2G26690
GO:0006897	endocytosis	BP	0.166653212427199	AT3G60260//AT1G33900
GO:0046777	protein autophosphorylation	BP	0.166740405389491	ATMKK9//ATPUB13//ATCIPK8//AT3G20200//ATGSK1
GO:0009694	jasmonic acid metabolic process	BP	0.171606176425775	VTC5//AT4G05160//ANAC055//ATMYC2//AT1G61890
GO:0006694	steroid biosynthetic process	BP	0.175580933805829	AT5G64500//AtDWF4//SQE3//ATSMO1//AtGH9B7//AT2G05755
GO:0016567	protein ubiquitination	BP	0.176396969270688	AT5G42200//AT5G37930//XBAT33//ATL4//ATPUB13//AT1G71020//MAX2
GO:0042538	hyperosmotic salinity response	BP	0.176526514802816	ABI2//VTC5//ATBP-1//ANAC055//ATGSK1
GO:0043069	negative regulation of programmed cell d...	BP	0.176526514802816	CRK36//ATMEK4//ANAC055//ATMYC2//IMPA-4
GO:0009742	brassinosteroid mediated signaling pathw...	BP	0.17722561555172	ATIWS1//ATGSK1