GOID TERM ONTOLOGY pValue Genes GO:0006626 protein targeting to mitochondrion BP 0.00363728909521538 TOM20-1//AT1G80245//AT1G15420//LSM8//ATTIM17-2 GO:0070585 protein localization to mitochondrion BP 0.00363728909521538 TOM20-1//AT1G80245//AT1G15420//LSM8//ATTIM17-2 GO:0072655 establishment of protein localization to... BP 0.00363728909521538 TOM20-1//AT1G80245//AT1G15420//LSM8//ATTIM17-2 GO:0052542 defense response by callose deposition BP 0.00755325960125585 AT4G34150//AtMYB51//ATMYB15//AT3G02840//AT2G32140 GO:0007005 mitochondrion organization BP 0.0103282792058668 TOM20-1//AT1G80245//AT1G15420//LSM8//ATTIM17-2 GO:0019722 calcium-mediated signaling BP 0.0161799486694452 ATNMT1//ATCBL9//CST//ATCAL4 GO:0009719 response to endogenous stimulus BP 0.0194276110016146 IAA18//SNRK2-3//ATPEP1//ATEXO70B1//AT5G54170//SAG12//ATBPC6//AT5G18150//ATMYB33//AT-HSFA3//AT3G54130//OEC33//AT4G37290//CST//AT4G34150//AT4G22820//RHA1B//UNE11//AtMYB51//MSL3//ATELC//AXR4//WAKL2//AtPFA-DSP3//ATMYB15//AT3G02840//ASA1//ATMYB65//AT1G19020//AT1G77640//AT1G63720//ATCKX5//AT1G33050//AT1G64610//AT1G74840//AT1G68620//GLIP2//ABI4//ATCDPK3//AT1G24140//ATNIC1//AT2G32090//ATHB-7//AXL//ATCAL4 GO:0009646 response to absence of light BP 0.0200253042740971 AT4G34150//AT3G15760//ATCAL4//CID1 GO:0019932 second-messenger-mediated signaling BP 0.0221413315115411 ATNMT1//ATCBL9//CST//ATCAL4 GO:0033037 polysaccharide localization BP 0.026277651826865 AT4G34150//AtMYB51//ATMYB15//AT3G02840//AT2G32140 GO:0052545 callose localization BP 0.026277651826865 AT4G34150//AtMYB51//ATMYB15//AT3G02840//AT2G32140 GO:0006986 response to unfolded protein BP 0.0310499602781612 AT5G10695//ATIRE1-1//AT4G34150//AT3G02840//AT1G19020//AT1G76700//AT1G64610//ATCDPK3//AT1G24140 GO:0030968 endoplasmic reticulum unfolded protein r... BP 0.0310499602781612 AT5G10695//ATIRE1-1//AT4G34150//AT3G02840//AT1G19020//AT1G76700//AT1G64610//ATCDPK3//AT1G24140 GO:0034620 cellular response to unfolded protein BP 0.0310499602781612 AT5G10695//ATIRE1-1//AT4G34150//AT3G02840//AT1G19020//AT1G76700//AT1G64610//ATCDPK3//AT1G24140 GO:0035967 cellular response to topologically incor... BP 0.0310499602781612 AT5G10695//ATIRE1-1//AT4G34150//AT3G02840//AT1G19020//AT1G76700//AT1G64610//ATCDPK3//AT1G24140 GO:0005983 starch catabolic process BP 0.0384953501270555 BAM4//ABI4 GO:0010942 positive regulation of cell death BP 0.0384953501270555 ATMYB33//ATMYB65 GO:0017004 cytochrome complex assembly BP 0.0384953501270555 PrfB3//ATCCMH GO:0009612 response to mechanical stimulus BP 0.0439015954812894 CST//AT4G34150//AXR4//ATCAL4 GO:0009738 abscisic acid-activated signaling pathwa... BP 0.0439749106785747 SNRK2-3//ATEXO70B1//ATMYB33//AtPFA-DSP3//ATMYB15//AT1G63720//AT1G64610//ABI4//ATCDPK3//ATHB-7 GO:0055080 cation homeostasis BP 0.0441769569560653 AT5G27290//ATIREG3//AT5G01750//OEC33//ATCHX17//ACA1//AHA10 GO:0009251 glucan catabolic process BP 0.0460769916829145 BAM4//ABI4 GO:0016925 protein sumoylation BP 0.0460769916829145 AT5G27700//DVL11 GO:0044247 cellular polysaccharide catabolic proces... BP 0.0460769916829145 BAM4//ABI4 GO:0010033 response to organic substance BP 0.0479820869201332 AT5G10695//IAA18//SNRK2-3//ATPEP1//ATEXO70B1//ATNMT1//AT5G54170//SAG12//ATU2AF35B//ATBPC6//ATIRE1-1//AT5G18150//CI51//ATMYB33//AT-HSFA3//AT3G57760//AT3G54130//OEC33//AT4G37290//CST//AT4G34150//ATCHX17//AT4G22820//RHA1B//UNE11//AtMYB51//MSL3//ATELC//AXR4//WAKL2//AtPFA-DSP3//AT3G17020//ATMYB15//AT3G02840//ATS6A.2//ASA1//ATMYB65//AT1G19020//At-SCL33//AT1G77640//ATGSTF14//AT1G76700//AT1G63720//ATCKX5//GLN1;5//AT1G33050//AT1G64610//LPAT4//AT1G74840//AT1G68620//LSM8//GLIP2//ABI4//ATCDPK3//AT1G24140//ATNIC1//AT2G32090//ATHB-7//AXL//ATCAL4 GO:0010200 response to chitin BP 0.0492151699609303 AT5G18150//AT-HSFA3//AT3G54130//AT4G34150//AT4G22820//RHA1B//AtMYB51//ATELC//WAKL2//AtPFA-DSP3//ATMYB15//AT3G02840//AT1G19020//AT1G68620//AT1G24140//ATCAL4 GO:0006839 mitochondrial transport BP 0.049932095845833 TOM20-1//AT1G80245//AT1G15420//LSM8//ATTIM17-2 GO:0071215 cellular response to abscisic acid stimu... BP 0.0517611725819427 SNRK2-3//ATEXO70B1//ATMYB33//AtPFA-DSP3//ATMYB15//AT1G63720//AT1G64610//ABI4//ATCDPK3//ATHB-7 GO:0048527 lateral root development BP 0.0528133028033186 IAA18//ASA1//ATGSTF14//AT1G76700//ABI4 GO:0048878 chemical homeostasis BP 0.0539564601067037 AT5G27290//ATIREG3//AT5G01750//OEC33//ATCHX17//ACA1//AHA10//AXL GO:0006995 cellular response to nitrogen starvation BP 0.0541522547456205 AT5G01750//CRK10 GO:0009789 positive regulation of abscisic acid-act... BP 0.0541522547456205 SNRK2-3//ATMYB33 GO:0055067 monovalent inorganic cation homeostasis BP 0.0541522547456205 ATCHX17//AHA10 GO:0010243 response to organonitrogen compound BP 0.0576676251905923 AT5G18150//AT-HSFA3//AT3G54130//AT4G34150//AT4G22820//RHA1B//AtMYB51//ATELC//WAKL2//AtPFA-DSP3//ATMYB15//AT3G02840//AT1G19020//AT1G68620//AT1G24140//ATCAL4 GO:0030003 cellular cation homeostasis BP 0.0589488365354448 AT5G27290//ATIREG3//AT5G01750//OEC33//ACA1//AHA10 GO:0050801 ion homeostasis BP 0.0592755981617292 AT5G27290//ATIREG3//AT5G01750//OEC33//ATCHX17//ACA1//AHA10 GO:0006873 cellular ion homeostasis BP 0.0644256603975208 AT5G27290//ATIREG3//AT5G01750//OEC33//ACA1//AHA10 GO:0009723 response to ethylene BP 0.0646022192019975 ATPEP1//SAG12//ATBPC6//AT4G37290//AtMYB51//AtPFA-DSP3//ATMYB15//ATMYB65//AT1G63720//AT1G64610//AT1G74840//GLIP2//ATCDPK3 GO:0009692 ethylene metabolic process BP 0.0672725696308749 AT1G35210//AT4G37290//AT3G02840//AT1G24140//AT2G46620//AT2G32140 GO:0009693 ethylene biosynthetic process BP 0.0672725696308749 AT1G35210//AT4G37290//AT3G02840//AT1G24140//AT2G46620//AT2G32140 GO:0043449 cellular alkene metabolic process BP 0.0672725696308749 AT1G35210//AT4G37290//AT3G02840//AT1G24140//AT2G46620//AT2G32140 GO:0043450 alkene biosynthetic process BP 0.0672725696308749 AT1G35210//AT4G37290//AT3G02840//AT1G24140//AT2G46620//AT2G32140 GO:1900673 olefin metabolic process BP 0.0672725696308749 AT1G35210//AT4G37290//AT3G02840//AT1G24140//AT2G46620//AT2G32140 GO:1900674 olefin biosynthetic process BP 0.0672725696308749 AT1G35210//AT4G37290//AT3G02840//AT1G24140//AT2G46620//AT2G32140 GO:0033036 macromolecule localization BP 0.0704848545271871 AT5G10695//ATPEX14//ATU2AF35B//WLIM2b//OEC33//VPS24//CST//AT4G34150//ATCHX17//AtMYB51//ATELC//TOM20-1//AT3G17020//ATMYB15//AT3G02840//ATSUN2//HST//ARI12//AT1G64610//AT1G80245//AT1G74840//EDA4//AT1G15420//ATSYP51//LSM8//ABI4//ATCDPK3//AT2G32140//ATTIM17-2//AXL//SNF7.2//ATCAL4//CID1//BP80-3;2 GO:1901421 positive regulation of response to alcoh... BP 0.0716297320963998 SNRK2-3//ATMYB33 GO:0048528 post-embryonic root development BP 0.0720907511622288 IAA18//ASA1//ATGSTF14//AT1G76700//ABI4 GO:0055082 cellular chemical homeostasis BP 0.0793816362470046 AT5G27290//ATIREG3//AT5G01750//OEC33//ACA1//AHA10 GO:0006638 neutral lipid metabolic process BP 0.0809598295935023 LPPepsilon1//ABI4 GO:0006639 acylglycerol metabolic process BP 0.0809598295935023 LPPepsilon1//ABI4 GO:0043562 cellular response to nitrogen levels BP 0.0809598295935023 AT5G01750//CRK10 GO:0009733 response to auxin BP 0.0829199121655979 IAA18//UNE11//AtMYB51//AXR4//ATMYB15//ASA1//AT1G63720//AT1G74840//GLIP2//ATCDPK3//AXL GO:0097306 cellular response to alcohol BP 0.0848542137920432 SNRK2-3//ATEXO70B1//ATMYB33//AtPFA-DSP3//ATMYB15//AT1G63720//AT1G64610//ABI4//ATCDPK3//ATHB-7 GO:0010413 glucuronoxylan metabolic process BP 0.0858662241494062 IRX15-L//AT5G59830//ATIRE1-1//AtEML3//GUX1//OTS2 GO:0045492 xylan biosynthetic process BP 0.0858662241494062 IRX15-L//AT5G59830//ATIRE1-1//AtEML3//GUX1//OTS2 GO:0030001 metal ion transport BP 0.0876918792411024 AT5G27290//ATIREG3//ATCBL9//AT5G23830//AT5G01750//OEC33//ATCHX17//UNE11//IAR1//ACA1//AT1G22440//EDA4//AtCIPK16//AtGulLO2 GO:0035966 response to topologically incorrect prot... BP 0.08856736398689 AT5G10695//ATNMT1//ATIRE1-1//CI51//AT4G34150//AT3G02840//ATS6A.2//AT1G19020//AT1G76700//AT1G64610//ATCDPK3//AT1G24140 GO:0019725 cellular homeostasis BP 0.0886895819261139 AT5G27290//ATIREG3//WCRKC1//AT5G06430//AT5G01750//OEC33//ATHM2//ACA1//AHA10 GO:0071456 cellular response to hypoxia BP 0.090639147644022 PROPEP3//ARI12 GO:0008104 protein localization BP 0.0911723098003014 AT5G10695//ATPEX14//WLIM2b//OEC33//VPS24//CST//AT4G34150//ATCHX17//AtMYB51//ATELC//TOM20-1//AT3G17020//AT3G02840//ATSUN2//ARI12//AT1G64610//AT1G80245//AT1G74840//AT1G15420//ATSYP51//LSM8//ABI4//ATCDPK3//ATTIM17-2//SNF7.2//ATCAL4//CID1//BP80-3;2 GO:0045491 xylan metabolic process BP 0.0926341434873463 IRX15-L//AT5G59830//ATIRE1-1//AtEML3//GUX1//OTS2 GO:0010628 positive regulation of gene expression BP 0.09483659717426 CRR1//ATMYB33//ATHB51//AFC1//OEC33//ATMYB65//At-SCL33//ATGRAS2//ATVOZ1//ABI4//ATHB-7//AXL GO:0009741 response to brassinosteroid BP 0.10263885613851 IAA18//UNE11//AT1G77640//AT2G32090 GO:0006623 protein targeting to vacuole BP 0.102982739154923 WLIM2b//ATCHX17//AT3G17020//ATSYP51//BP80-3;2 GO:0072665 protein localization to vacuole BP 0.102982739154923 WLIM2b//ATCHX17//AT3G17020//ATSYP51//BP80-3;2 GO:0072666 establishment of protein localization to... BP 0.102982739154923 WLIM2b//ATCHX17//AT3G17020//ATSYP51//BP80-3;2 GO:0048573 photoperiodism, flowering BP 0.104431786789128 AT5G66180//AT5G59830//ATU2AF35B//WLIM2b//AT1G25420//ATVOZ1//ATTIM17-2 GO:0033365 protein localization to organelle BP 0.105773194746477 ATPEX14//WLIM2b//ATCHX17//TOM20-1//AT3G17020//ATSUN2//ARI12//AT1G80245//AT1G15420//ATSYP51//LSM8//ATTIM17-2//BP80-3;2 GO:0010557 positive regulation of macromolecule bio... BP 0.105872440502191 CRR1//ATMYB33//ATHB51//AFC1//OEC33//ATMYB65//At-SCL33//ATGRAS2//ATVOZ1//ABI4//ATHB-7//AXL GO:0001666 response to hypoxia BP 0.107771724560813 PROPEP3//AT4G19460//ATGSTF14//ARI12 GO:0006914 autophagy BP 0.107771724560813 BAM4//ATIRE1-1//ATG8G//ATSIK GO:0031328 positive regulation of cellular biosynth... BP 0.110491649427194 CRR1//ATMYB33//ATHB51//AFC1//OEC33//ATMYB65//At-SCL33//ATGRAS2//ATVOZ1//ABI4//ATHB-7//AXL GO:0044038 cell wall macromolecule biosynthetic pro... BP 0.110768549984348 IRX15-L//AT5G59830//ATIRE1-1//AtEML3//GUX1//OTS2 GO:0070589 cellular component macromolecule biosynt... BP 0.110768549984348 IRX15-L//AT5G59830//ATIRE1-1//AtEML3//GUX1//OTS2 GO:0070592 cell wall polysaccharide biosynthetic pr... BP 0.110768549984348 IRX15-L//AT5G59830//ATIRE1-1//AtEML3//GUX1//OTS2 GO:0010359 regulation of anion channel activity BP 0.110920736813886 AT1G22440//ATCDPK3 GO:0036294 cellular response to decreased oxygen le... BP 0.110920736813886 PROPEP3//ARI12 GO:0048235 pollen sperm cell differentiation BP 0.110920736813886 ATMYB33//ATMYB65 GO:0071453 cellular response to oxygen levels BP 0.110920736813886 PROPEP3//ARI12 GO:1903959 regulation of anion transmembrane transp... BP 0.110920736813886 AT1G22440//ATCDPK3 GO:0009753 response to jasmonic acid BP 0.111502419331058 IAA18//ATPEP1//AT5G54170//OEC33//CST//AtMYB51//MSL3//ATMYB15//AT1G63720//ATCKX5//AT1G64610//AT1G74840//GLIP2//ATCDPK3 GO:1902580 single-organism cellular localization BP 0.111558745621717 AT5G10695//ATPEX14//WLIM2b//OEC33//CST//AT4G34150//ATCHX17//AtMYB51//TOM20-1//AT3G17020//AT3G02840//ARI12//AT1G64610//AT1G80245//AT1G74840//AT1G15420//ATSYP51//LSM8//ATCDPK3//ATTIM17-2//ATCAL4//BP80-3;2 GO:0006605 protein targeting BP 0.113187576204509 AT5G10695//ATPEX14//WLIM2b//OEC33//CST//AT4G34150//ATCHX17//AtMYB51//TOM20-1//AT3G17020//AT3G02840//ARI12//AT1G64610//AT1G80245//AT1G74840//AT1G15420//ATSYP51//LSM8//ATCDPK3//ATTIM17-2//ATCAL4//BP80-3;2 GO:1901700 response to oxygen-containing compound BP 0.113800043954743 IAA18//AT5G35320//SNRK2-3//ATPEP1//ATEXO70B1//AT5G54170//ATCBL9//ATU2AF35B//ATIRE1-1//AT5G18150//SVR3//ATMYB33//AT-HSFA3//AT3G54130//OEC33//LPPepsilon1//CST//AT4G34150//AT4G22820//RHA1B//UNE11//AtMYB51//MSL3//ATELC//WAKL2//AtPFA-DSP3//ATMYB15//AT3G02840//ATMYB65//AT1G19020//AT1G77640//ATGSTF14//AT1G63720//ATCKX5//GLN1;5//AT1G22440//AT1G64610//LPAT4//AT1G74840//AT1G68620//GLIP2//ABI4//ATCDPK3//AT1G24140//ATNIC1//AT2G32090//ATHB-7//AXL//ATCAL4//CID1 GO:0010410 hemicellulose metabolic process BP 0.11459891922909 IRX15-L//AT5G59830//ATIRE1-1//AtEML3//GUX1//OTS2 GO:0042592 homeostatic process BP 0.117814141471416 AT5G27290//ATIREG3//WCRKC1//AT5G06430//AT5G01750//OEC33//ATCHX17//ATHM2//ACA1//AHA10//AXL GO:0036293 response to decreased oxygen levels BP 0.11837555301768 PROPEP3//AT4G19460//ATGSTF14//ARI12 GO:0009110 vitamin biosynthetic process BP 0.119814473539873 AT5G23330//G-TMT//AtGulLO2 GO:0048522 positive regulation of cellular process BP 0.120614677969187 DCP5//SNRK2-3//CRR1//AT5G14390//AtEML3//ATMYB33//ATHB51//AFC1//OEC33//ATMYB65//At-SCL33//ATGRAS2//ATVOZ1//ABI4//ATHB-7//AXL//POP4 GO:1901661 quinone metabolic process BP 0.121464702423019 AT1G19140//AAE14 GO:1901663 quinone biosynthetic process BP 0.121464702423019 AT1G19140//AAE14 GO:0009648 photoperiodism BP 0.121532234281741 AT5G66180//AT5G59830//ATU2AF35B//WLIM2b//AT1G25420//ATVOZ1//ATTIM17-2 GO:0070482 response to oxygen levels BP 0.123841153841515 PROPEP3//AT4G19460//ATGSTF14//ARI12 GO:0007034 vacuolar transport BP 0.129802713358845 WLIM2b//ATCHX17//AT3G17020//ATSYP51//BP80-3;2 GO:0045893 positive regulation of transcription, DN... BP 0.131053672641735 CRR1//ATMYB33//ATHB51//OEC33//ATMYB65//At-SCL33//ATGRAS2//ATVOZ1//ABI4//ATHB-7//AXL GO:0051254 positive regulation of RNA metabolic pro... BP 0.131053672641735 CRR1//ATMYB33//ATHB51//OEC33//ATMYB65//At-SCL33//ATGRAS2//ATVOZ1//ABI4//ATHB-7//AXL GO:1902680 positive regulation of RNA biosynthetic ... BP 0.131053672641735 CRR1//ATMYB33//ATHB51//OEC33//ATMYB65//At-SCL33//ATGRAS2//ATVOZ1//ABI4//ATHB-7//AXL GO:1903508 positive regulation of nucleic acid-temp... BP 0.131053672641735 CRR1//ATMYB33//ATHB51//OEC33//ATMYB65//At-SCL33//ATGRAS2//ATVOZ1//ABI4//ATHB-7//AXL GO:0042221 response to chemical BP 0.131336695895425 TFIIB//AT5G10695//IAA18//AT5G35320//SNRK2-3//ATPEP1//PROPEP3//ATEXO70B1//ATNMT1//AT5G54170//ATCBL9//SAG12//CML43//ATU2AF35B//ATBPC6//ATIRE1-1//AT5G18150//SVR3//CI51//ATMYB33//AT-HSFA3//AT3G57760//AT3G54130//OEC33//LPPepsilon1//AT4G37290//CST//AT4G34150//ADS1//ATCHX17//AT4G22820//RHA1B//UNE11//AtMYB51//MSL3//ATELC//AXR4//WAKL2//AtPFA-DSP3//AT3G17020//ATMYB15//AT3G02840//ATS6A.2//ASA1//ATMYB65//AT1G19020//At-SCL33//AT1G77640//ATGSTF14//AT1G76700//AT1G63720//ATGRAS2//ATCKX5//ARI12//GLN1;5//AT1G33050//AT1G22440//AT1G64610//LPAT4//AT1G74840//AT1G68620//LSM8//GLIP2//ABI4//ATCDPK3//AT1G24140//ATNIC1//AT2G32090//ATHB-7//AXL//POP4//ATCAL4//CID1 GO:0006979 response to oxidative stress BP 0.131663225820006 AT5G19875//AT5G35320//SVR3//SRPK4//LPPepsilon1//ATHM2//AT2G34060//AtPFA-DSP3//AT3G02840//AT3G10020//AT1G19020//AT1G49570//AT1G64610//AT2G04795