GOID TERM ONTOLOGY pValue Genes GO:0016572 histone phosphorylation BP 0.00824957436576787 PME5//3xHMG-box2//AT3G17680//CDKB2;1//AtTPX2 GO:0019827 stem cell maintenance BP 0.0139247481007909 AGO10//CAK1AT//AT1G56290//PLT1 GO:0009067 aspartate family amino acid biosynthetic... BP 0.0150062276280488 LOG8//AT3G53580//AT3G22520//AFB3//AT2G24290 GO:0048863 stem cell differentiation BP 0.015222639522139 AGO10//CAK1AT//AT1G56290//PLT1 GO:0048864 stem cell development BP 0.015222639522139 AGO10//CAK1AT//AT1G56290//PLT1 GO:0031400 negative regulation of protein modificat... BP 0.0206020012411224 CAK1AT//CDKB2;1//AtTPR GO:0007568 aging BP 0.021997441421177 ANAC092//DIN9//ANAC029//DXL1//AHK3 GO:0045596 negative regulation of cell differentiat... BP 0.0228420738865969 AGO10//CAK1AT//AT1G56290//PLT1 GO:0006406 mRNA export from nucleus BP 0.0229936108717806 AT1G56290//ABCF3//AtTPR GO:0051028 mRNA transport BP 0.0229936108717806 AT1G56290//ABCF3//AtTPR GO:0010033 response to organic substance BP 0.0239047440260984 KAN2//PORA//AT5G50760//ATERF-9//AGO10//ANAC092//ATMIXTA//DREB2//FKD1//MARD1//ARGOS//ACR4//ARR17//AT3G53250//KAI2//3xHMG-box2//IQD22//DIN9//AT1G56290//AT3G20010//AT3G22520//AT3G05640//AT3G07310//FBI1//LEA14//CDKB2;1//ANAC019//LOV1//CKH1//AFB3//AT1G44760//AT1G68620//AT1G60010//AHK3//PAP3//AT2G17650//AT1G61360//AT2G42900//AT2G28780//ARL GO:0010020 chloroplast fission BP 0.0240458338347725 ARC3//ATFTSZ2-1 GO:0007167 enzyme linked receptor protein signaling... BP 0.0247286601275041 AT2G45340//AT5G51560//IMK2//AT3G46370//ATCLV1 GO:0007169 transmembrane receptor protein tyrosine ... BP 0.0247286601275041 AT2G45340//AT5G51560//IMK2//AT3G46370//ATCLV1 GO:0006403 RNA localization BP 0.0255295675303421 AT1G56290//ABCF3//AtTPR GO:0006405 RNA export from nucleus BP 0.0255295675303421 AT1G56290//ABCF3//AtTPR GO:0050657 nucleic acid transport BP 0.0255295675303421 AT1G56290//ABCF3//AtTPR GO:0050658 RNA transport BP 0.0255295675303421 AT1G56290//ABCF3//AtTPR GO:0051236 establishment of RNA localization BP 0.0255295675303421 AT1G56290//ABCF3//AtTPR GO:0043572 plastid fission BP 0.0289166980726309 ARC3//ATFTSZ2-1 GO:0009066 aspartate family amino acid metabolic pr... BP 0.0292189745615122 LOG8//AT3G53580//AT3G22520//AFB3//AT2G24290 GO:0051168 nuclear export BP 0.0310332104569844 AT1G56290//ABCF3//AtTPR GO:0009719 response to endogenous stimulus BP 0.0315926890558418 KAN2//PORA//AT5G50760//ATERF-9//ANAC092//ATMIXTA//DREB2//FKD1//MARD1//ARGOS//ACR4//ARR17//AT3G53250//IQD22//AT3G05640//AT3G07310//FBI1//LEA14//CDKB2;1//ANAC019//CKH1//AT1G68620//AHK3//PAP3//AT2G17650//AT1G61360//AT2G28780//ARL GO:0045736 negative regulation of cyclin-dependent ... BP 0.0341431401819823 CAK1AT//CDKB2;1 GO:0000160 phosphorelay signal transduction system BP 0.0341938850827933 ATERF-9//ANAC092//ARR17//CKH1//AHK3 GO:0042127 regulation of cell proliferation BP 0.0359618993941981 FKD1//ARGOS//3xHMG-box2//AT3G09100//AtTPX2 GO:0048509 regulation of meristem development BP 0.03795931686957 AT2G45340//GIL1//AT5G51560//CDKB2;1//ATCLV1//AHK3//SPL10 GO:0009755 hormone-mediated signaling pathway BP 0.0392098095263069 ATERF-9//ANAC092//FKD1//ARR17//AT3G07310//FBI1//CDKB2;1//ANAC019//CKH1//AHK3//PAP3//AT2G17650//AT2G28780//ARL GO:0071470 cellular response to osmotic stress BP 0.03970475550736 ATBPM1//AtTLP3 GO:0010150 leaf senescence BP 0.0403561905068754 ANAC092//ANAC029//AHK3 GO:0071396 cellular response to lipid BP 0.0422456569040183 ANAC092//AT3G07310//FBI1//ANAC019//AHK3//PAP3//AT2G17650//ARL GO:0007166 cell surface receptor signaling pathway BP 0.0435913225559585 AT2G45340//AT5G51560//IMK2//AT3G46370//ATCLV1 GO:0010440 stomatal lineage progression BP 0.0437437324392652 CAK1AT//CYCP2;1//CDKB2;1 GO:0032957 inositol trisphosphate metabolic process BP 0.0455819234753122 AT3G63240//ATSAC1 GO:0007623 circadian rhythm BP 0.0456190673371341 AT4G16146//UVR8//FBI1//FB//AHK3//PAP3 GO:0048511 rhythmic process BP 0.0456190673371341 AT4G16146//UVR8//FBI1//FB//AHK3//PAP3 GO:0010162 seed dormancy process BP 0.045639251509603 KAN2//MARD1//ACR4//AT1G56290//AT3G07310 GO:0022611 dormancy process BP 0.045639251509603 KAN2//MARD1//ACR4//AT1G56290//AT3G07310 GO:0009873 ethylene-activated signaling pathway BP 0.0466140403502349 ATERF-9//ANAC092//CKH1//AHK3 GO:0051302 regulation of cell division BP 0.0472686131589424 ACR4//PLT1//ORS1 GO:0048507 meristem development BP 0.0493893962321767 AT2G45340//GIL1//AT5G51560//AGO10//ACR4//CAK1AT//AT1G56290//AT3G20010//CDKB2;1//ATCLV1//AHK3//SPL10 GO:0009725 response to hormone BP 0.0495304304814702 KAN2//PORA//AT5G50760//ATERF-9//ANAC092//ATMIXTA//FKD1//MARD1//ARGOS//ACR4//ARR17//AT3G53250//IQD22//AT3G05640//AT3G07310//FBI1//LEA14//CDKB2;1//ANAC019//CKH1//AHK3//PAP3//AT2G17650//AT2G28780//ARL GO:0046838 phosphorylated carbohydrate dephosphoryl... BP 0.0517557815698406 AT3G63240//ATSAC1 GO:0046855 inositol phosphate dephosphorylation BP 0.0517557815698406 AT3G63240//ATSAC1 GO:0071545 inositol phosphate catabolic process BP 0.0517557815698406 AT3G63240//ATSAC1 GO:0032870 cellular response to hormone stimulus BP 0.0520105250110217 ATERF-9//ANAC092//FKD1//ARR17//AT3G07310//FBI1//CDKB2;1//ANAC019//CKH1//AHK3//PAP3//AT2G17650//AT2G28780//ARL GO:0071495 cellular response to endogenous stimulus BP 0.0540507741826024 ATERF-9//ANAC092//FKD1//ARR17//AT3G07310//FBI1//CDKB2;1//ANAC019//CKH1//AHK3//PAP3//AT2G17650//AT2G28780//ARL GO:0000079 regulation of cyclin-dependent protein s... BP 0.0547228801657531 CAK1AT//CYCP2;1//CDKB2;1 GO:0043648 dicarboxylic acid metabolic process BP 0.0582082001066066 LOG8//AT3G53580 GO:0009736 cytokinin-activated signaling pathway BP 0.0586481148272384 ARR17//CKH1//AHK3 GO:0071368 cellular response to cytokinin stimulus BP 0.0627024108932318 ARR17//CKH1//AHK3 GO:0032269 negative regulation of cellular protein ... BP 0.0668833534182981 CAK1AT//CDKB2;1//AtTPR GO:0051248 negative regulation of protein metabolic... BP 0.0668833534182981 CAK1AT//CDKB2;1//AtTPR GO:0051258 protein polymerization BP 0.0675988305514888 GIL1//AtCPA//ARC3//ATFTSZ2-1//ATSAC1//AtTPX2 GO:0008283 cell proliferation BP 0.0681093778314103 FKD1//ARGOS//IMK2//3xHMG-box2//AT3G09100//CDKB2;1//AtTPX2 GO:0042221 response to chemical BP 0.0683622997253343 KAN2//AT1G77330//PORA//AT5G50760//ATERF-9//AGO10//ANAC092//ATBPM1//ATMIXTA//ABCG22//AT5G05880//AT5G05400//DREB2//FKD1//MARD1//ARGOS//ACR4//ARR17//AT3G53250//KAI2//3xHMG-box2//IQD22//DIN9//AT1G56290//AT3G20010//AT3G22520//AT3G05640//AT3G07310//FBI1//LEA14//CDKB2;1//ANAC019//LOV1//CKH1//AFB3//AT1G44760//ABCF3//AT1G68620//AT1G60010//FB//AHK3//PAP3//AT2G17650//AT1G61360//AT2G42900//AT2G28780//AtTLP3//ARL" GO:0033993 response to lipid BP 0.0709570829317251 KAN2//ANAC092//ATMIXTA//MARD1//ACR4//IQD22//AT3G05640//AT3G07310//FBI1//LEA14//ANAC019//AHK3//PAP3//AT2G17650//ARL GO:0009723 response to ethylene BP 0.0763313157788456 PORA//ATERF-9//ANAC092//ATMIXTA//ANAC019//CKH1//AHK3 GO:0071369 cellular response to ethylene stimulus BP 0.0767475585652916 ATERF-9//ANAC092//CKH1//AHK3 GO:0009743 response to carbohydrate BP 0.0781065342434879 ANAC092//ACR4//KAI2//DIN9//AT1G56290//AT1G60010//AHK3//AT2G42900 GO:0048532 anatomical structure arrangement BP 0.0784741650740517 AGO10//ACR4//AT1G56290//AT3G20010//CDKB2;1//ATCLV1//SPL10 GO:0000303 response to superoxide BP 0.0790660057918858 ANAC092//AHK3 GO:0000305 response to oxygen radical BP 0.0790660057918858 ANAC092//AHK3 GO:0031537 regulation of anthocyanin metabolic proc... BP 0.0790660057918858 AHK3//PAP3 GO:0045786 negative regulation of cell cycle BP 0.0790660057918858 CAK1AT//CDKB2;1 GO:0046174 polyol catabolic process BP 0.0790660057918858 AT3G63240//ATSAC1 GO:0015931 nucleobase-containing compound transport BP 0.080160256441137 AT1G56290//ABCF3//AtTPR GO:0042538 hyperosmotic salinity response BP 0.0801933877523174 ANAC092//ATHAL3//AT3G05640//ANAC019 GO:0080167 response to karrikin BP 0.0801933877523174 AT3G60290//KAI2//FB//AT2G39980 GO:0017038 protein import BP 0.0817921905016128 TOM20-1//AT3G03330//ABCF3//AtTPR//AHK3//FRS3 GO:0009733 response to auxin BP 0.0820624287278199 AT5G50760//ANAC092//ATMIXTA//FKD1//ARGOS//AT3G53250//ANAC019//AT2G28780 GO:0010260 organ senescence BP 0.0848215033944961 ANAC092//ANAC029//AHK3 GO:0042181 ketone biosynthetic process BP 0.0864651857798509 AT3G53580//DHNAT1 GO:0046164 alcohol catabolic process BP 0.0864651857798509 AT3G63240//ATSAC1 GO:0071901 negative regulation of protein serine/th... BP 0.0864651857798509 CAK1AT//CDKB2;1 GO:1901661 quinone metabolic process BP 0.0864651857798509 AT3G53580//DHNAT1 GO:1901663 quinone biosynthetic process BP 0.0864651857798509 AT3G53580//DHNAT1 GO:0070887 cellular response to chemical stimulus BP 0.0874996812245335 ATERF-9//AGO10//ANAC092//ATBPM1//FKD1//ACR4//ARR17//AT1G56290//AT3G20010//AT3G22520//AT3G07310//FBI1//CDKB2;1//ANAC019//CKH1//AFB3//AHK3//PAP3//AT2G17650//AT2G28780//ARL GO:0002238 response to molecule of fungal origin BP 0.0940624403898543 LOV1//AT1G44760 GO:0006469 negative regulation of protein kinase ac... BP 0.0940624403898543 CAK1AT//CDKB2;1 GO:0033673 negative regulation of kinase activity BP 0.0940624403898543 CAK1AT//CDKB2;1 GO:0051348 negative regulation of transferase activ... BP 0.0940624403898543 CAK1AT//CDKB2;1 GO:0009740 gibberellic acid mediated signaling path... BP 0.0944802319877471 AT3G07310//PAP3//AT2G17650 GO:0071900 regulation of protein serine/threonine k... BP 0.0944802319877471 CAK1AT//CYCP2;1//CDKB2;1 GO:0010431 seed maturation BP 0.0952666154921639 KAN2//MARD1//ACR4//AT1G56290//AT3G07310 GO:0030258 lipid modification BP 0.0984294125456885 AT3G63240//AT3G52570//AT3G03330//AHK3//FRS3 GO:0010476 gibberellin mediated signaling pathway BP 0.0994717549371766 AT3G07310//PAP3//AT2G17650 GO:0071370 cellular response to gibberellin stimulu... BP 0.0994717549371766 AT3G07310//PAP3//AT2G17650 GO:0009739 response to gibberellin BP 0.101644786899233 ATMIXTA//IQD22//AT3G07310//PAP3//AT2G17650 GO:0001933 negative regulation of protein phosphory... BP 0.10184354905922 CAK1AT//CDKB2;1 GO:0042326 negative regulation of phosphorylation BP 0.10184354905922 CAK1AT//CDKB2;1 GO:1901616 organic hydroxy compound catabolic proce... BP 0.10184354905922 AT3G63240//ATSAC1 GO:0071310 cellular response to organic substance BP 0.102151951285605 ATERF-9//AGO10//ANAC092//FKD1//ACR4//ARR17//AT1G56290//AT3G20010//AT3G22520//AT3G07310//FBI1//CDKB2;1//ANAC019//CKH1//AHK3//PAP3//AT2G17650//AT2G28780//ARL GO:0044743 intracellular protein transmembrane impo... BP 0.102425726784894 TOM20-1//AT3G03330//AHK3//FRS3 GO:0065002 intracellular protein transmembrane tran... BP 0.102425726784894 TOM20-1//AT3G03330//AHK3//FRS3 GO:0071806 protein transmembrane transport BP 0.102425726784894 TOM20-1//AT3G03330//AHK3//FRS3 GO:0016569 covalent chromatin modification BP 0.102918700837033 PME5//AGO10//ASG2//AT4G26555//3xHMG-box2//AT3G20010//AT3G22520//AT3G17680//CDKB2;1//AtTPX2 GO:1901700 response to oxygen-containing compound BP 0.103240378405859 KAN2//AT1G77330//AT5G50760//ANAC092//ATBPM1//ATMIXTA//ABCG22//AT5G05400//DREB2//MARD1//ACR4//KAI2//IQD22//DIN9//AT1G56290//AT3G05640//AT3G07310//FBI1//LEA14//ANAC019//CKH1//AFB3//AT1G68620//AT1G60010//FB//AHK3//PAP3//AT2G17650//AT1G61360//AT2G42900//AtTLP3//ARL GO:0010286 heat acclimation BP 0.104567323290226 DREB2//LEA14//ANAC019 GO:0043549 regulation of kinase activity BP 0.104567323290226 CAK1AT//CYCP2;1//CDKB2;1