GOID	TERM	ONTOLOGY	pValue	Genes
GO:0009240	isopentenyl diphosphate biosynthetic pro...	BP	1.63541753368359e-05	Cpn60beta4//ATG4//PCB2//AT4G34090//AT4G02530//NDF4//PDE326//AT1G14270//ABC4
GO:0019288	isopentenyl diphosphate biosynthetic pro...	BP	1.63541753368359e-05	Cpn60beta4//ATG4//PCB2//AT4G34090//AT4G02530//NDF4//PDE326//AT1G14270//ABC4
GO:0046490	isopentenyl diphosphate metabolic proces...	BP	1.63541753368359e-05	Cpn60beta4//ATG4//PCB2//AT4G34090//AT4G02530//NDF4//PDE326//AT1G14270//ABC4
GO:0006090	pyruvate metabolic process	BP	6.85184670807374e-05	Cpn60beta4//ATG4//PCB2//AT4G34090//AT4G02530//NDF4//PDE326//AT1G14270//MAC3A//ABC4
GO:0008654	phospholipid biosynthetic process	BP	7.35190892846921e-05	Cpn60beta4//ATG4//PCB2//AT4G34090//AT4G02530//NDF4//PDE326//AT1G14270//ATCXXS1//ABC4
GO:0006720	isoprenoid metabolic process	BP	0.000138327181612354	Cpn60beta4//ATG4//PCB2//AT4G34090//AT4G02530//ABA4//NDF4//PDE326//AT1G14270//PES1//ABC4
GO:0006644	phospholipid metabolic process	BP	0.000195030509347377	Cpn60beta4//ATG4//PCB2//AT4G34090//AT4G02530//NDF4//PDE326//AT1G14270//ATCXXS1//ABC4
GO:0034470	ncRNA processing	BP	0.000257714992888837	ATG4//ATPRFB//PCB2//AT3G63510//AT3G51140//AT4G02530//AT3G13180//AT1G51310
GO:0016108	tetraterpenoid metabolic process	BP	0.000390493005901877	ATG4//PCB2//AT4G02530//ABA4//PDE326
GO:0016116	carotenoid metabolic process	BP	0.000390493005901877	ATG4//PCB2//AT4G02530//ABA4//PDE326
GO:0008299	isoprenoid biosynthetic process	BP	0.000419742957820803	Cpn60beta4//ATG4//PCB2//AT4G34090//AT4G02530//ABA4//NDF4//PDE326//AT1G14270//ABC4
GO:0019682	glyceraldehyde-3-phosphate metabolic pro...	BP	0.000425775390967896	Cpn60beta4//ATG4//PCB2//AT4G34090//AT4G02530//NDF4//PDE326//AT1G14270//ABC4
GO:0006081	cellular aldehyde metabolic process	BP	0.000454499098434891	Cpn60beta4//ATG4//PCB2//AT3G63510//AT4G34090//AT4G02530//NDF4//PDE326//AT1G14270//ABC4
GO:0034660	ncRNA metabolic process	BP	0.00134883278354597	ATG4//ATPRFB//PCB2//AT3G63510//AT3G51140//AT4G02530//AT3G13180//AT1G51310
GO:0008610	lipid biosynthetic process	BP	0.00175275154683574	Cpn60beta4//ATG4//PCB2//AT4G34090//AT4G02530//ABA4//NDF4//PDE326//AT1G14270//ATCXXS1//AT2G21860//PES1//ABC4
GO:0009073	aromatic amino acid family biosynthetic ...	BP	0.00219651644103947	ATG4//PCB2//AT3G51140//AT4G26370
GO:0010016	shoot system morphogenesis	BP	0.0024576371855689	ATG4//ATPRFB//PCB2//AT4G34090//AT4G26370//AtVGT1//ABC4//LSH3
GO:0016109	tetraterpenoid biosynthetic process	BP	0.00295983349888836	ATG4//PCB2//AT4G02530//PDE326
GO:0016117	carotenoid biosynthetic process	BP	0.00295983349888836	ATG4//PCB2//AT4G02530//PDE326
GO:0006364	rRNA processing	BP	0.0033399958640556	ATG4//ATPRFB//PCB2//AT3G51140//AT4G02530//AT3G13180
GO:0016072	rRNA metabolic process	BP	0.0033399958640556	ATG4//ATPRFB//PCB2//AT3G51140//AT4G02530//AT3G13180
GO:0032787	monocarboxylic acid metabolic process	BP	0.00368592389927042	Cpn60beta4//ATG4//PCB2//AT3G63510//AT4G34090//AT4G02530//ABA4//ATLOX1//NDF4//PDE326//AT1G14270//MAC3A//ABC4
GO:0042440	pigment metabolic process	BP	0.0037142653175038	ATG4//PCB2//ELP6//AtRbcX1//AT4G02530//PDE326//ARR7
GO:0006721	terpenoid metabolic process	BP	0.00466402594618014	ATG4//PCB2//AT4G02530//ABA4//PDE326//PES1
GO:0015995	chlorophyll biosynthetic process	BP	0.00499454750077067	ATG4//PCB2//AT4G02530//PDE326
GO:0044085	cellular component biogenesis	BP	0.00571745683371907	ATG4//ATPRFB//PCB2//AT3G51140//AtXTH31//AT4G26370//HTA4//AT4G02530//AT3G13180//CCRL6//AT1G14270//ABC4//OTP51//AT2G27740//AT2G03200
GO:0006399	tRNA metabolic process	BP	0.00601953809562924	AT3G63510//AT3G51140//AT3G13180//AT1G51310
GO:0044255	cellular lipid metabolic process	BP	0.00616621262215123	Cpn60beta4//ATG4//PCB2//AT4G34090//AT4G02530//ABA4//ATLOX1//NDF4//PDE326//AT1G14270//ATCXXS1//PES1//ABC4
GO:0009911	positive regulation of flower developmen...	BP	0.00630757624782322	AtVGT1//FT
GO:0090407	organophosphate biosynthetic process	BP	0.00643844628617901	Cpn60beta4//ATG4//PCB2//AT4G34090//AT4G02530//NDF4//PDE326//AT1G14270//ATCXXS1//ABC4
GO:0048518	positive regulation of biological proces...	BP	0.00688642328006224	Cpn60beta4//ATG4//ATPRFB//PCB2//AT5G04080//AT4G26370//ELP6//AT4G02530//AtVGT1//TAC1//FT
GO:0006629	lipid metabolic process	BP	0.00694723434724606	Cpn60beta4//ATG4//PCB2//AT4G34090//AT4G02530//ABA4//ATLOX1//NDF4//PDE326//AT1G14270//ATCXXS1//AT2G21860//PES1//AT1G62290//ABC4
GO:0046283	anthocyanin-containing compound metaboli...	BP	0.0074468749081813	ELP6//AtRbcX1//ARR7
GO:0006098	pentose-phosphate shunt	BP	0.00934706309836287	ATG4//PCB2//AT4G34090//AT4G02530//NDF4
GO:0051156	glucose 6-phosphate metabolic process	BP	0.00934706309836287	ATG4//PCB2//AT4G34090//AT4G02530//NDF4
GO:2000243	positive regulation of reproductive proc...	BP	0.00952909033592171	AtVGT1//FT
GO:0006739	NADP metabolic process	BP	0.00962594111097449	ATG4//PCB2//AT4G34090//AT4G02530//NDF4
GO:0046496	nicotinamide nucleotide metabolic proces...	BP	0.0111067991200978	ATG4//PCB2//AT4G34090//AT4G02530//NDF4
GO:0019362	pyridine nucleotide metabolic process	BP	0.0114206389166698	ATG4//PCB2//AT4G34090//AT4G02530//NDF4
GO:0042254	ribosome biogenesis	BP	0.0117255208159108	ATG4//ATPRFB//PCB2//AT3G51140//AT4G02530//AT3G13180
GO:0022613	ribonucleoprotein complex biogenesis	BP	0.0119922332916408	ATG4//ATPRFB//PCB2//AT3G51140//AT4G02530//AT3G13180
GO:0072524	pyridine-containing compound metabolic p...	BP	0.012736630492336	ATG4//PCB2//AT4G34090//AT4G02530//NDF4
GO:0006779	porphyrin-containing compound biosynthet...	BP	0.01279374342683	ATG4//PCB2//AT4G02530//PDE326
GO:0051188	cofactor biosynthetic process	BP	0.0130810401226808	ATG4//PCB2//AT4G02530//PDE326//ABC4
GO:0016114	terpenoid biosynthetic process	BP	0.0141520492927804	ATG4//PCB2//AT4G02530//ABA4//PDE326
GO:0033014	tetrapyrrole biosynthetic process	BP	0.0141776961234241	ATG4//PCB2//AT4G02530//PDE326
GO:0019684	photosynthesis, light reaction	BP	0.014899567478378	ATPRFB//AT4G02530//NDF4//AT1G14270//ABC4//OTP51
GO:0019752	carboxylic acid metabolic process	BP	0.0150154727921892	Cpn60beta4//ATG4//PCB2//AT3G63510//AT3G51140//AT4G34090//AT4G26370//AT4G02530//ABA4//ATLOX1//NDF4//PDE326//AT1G14270//MAC3A//ABC4
GO:0042793	transcription from plastid promoter	BP	0.0153361517175509	ATG4//ATPRFB//AT4G26370
GO:0046148	pigment biosynthetic process	BP	0.018145601353723	ATG4//PCB2//AtRbcX1//AT4G02530//PDE326
GO:0009893	positive regulation of metabolic process	BP	0.0187934564276027	Cpn60beta4//ATG4//ATPRFB//PCB2//AT5G04080//AT4G26370//AT4G02530//TAC1
GO:0031537	regulation of anthocyanin metabolic proc...	BP	0.0192587616169373	ELP6//ARR7
GO:0006733	oxidoreduction coenzyme metabolic proces...	BP	0.0199324766669291	ATG4//PCB2//AT4G34090//AT4G02530//NDF4
GO:0006732	coenzyme metabolic process	BP	0.020520484551652	ATG4//PCB2//AT4G34090//AT4G02530//NDF4//ABC4
GO:0008033	tRNA processing	BP	0.0208834030290385	AT3G63510//AT1G51310
GO:0015994	chlorophyll metabolic process	BP	0.021257275358421	ATG4//PCB2//AT4G02530//PDE326
GO:1901135	carbohydrate derivative metabolic proces...	BP	0.0213957269630187	Cpn60beta4//EMB2754//ATG4//PCB2//AT4G34090//AT4G02530//AT3G01620//NDF4//PDE326//AT1G14270//ABC4
GO:0009072	aromatic amino acid family metabolic pro...	BP	0.0218770670528998	ATG4//PCB2//AT3G51140//AT4G26370
GO:0009812	flavonoid metabolic process	BP	0.0218770670528998	AT5G04080//ELP6//AtRbcX1//ARR7
GO:0022411	cellular component disassembly	BP	0.0225631478996644	ATPRFB//ATLOX1
GO:0043436	oxoacid metabolic process	BP	0.0229054922015793	Cpn60beta4//ATG4//PCB2//AT3G63510//AT3G51140//AT4G34090//AT4G26370//AT4G02530//ABA4//ATLOX1//NDF4//PDE326//AT1G14270//MAC3A//ABC4
GO:0006082	organic acid metabolic process	BP	0.0231065718061797	Cpn60beta4//ATG4//PCB2//AT3G63510//AT3G51140//AT4G34090//AT4G26370//AT4G02530//ABA4//ATLOX1//NDF4//PDE326//AT1G14270//MAC3A//ABC4
GO:0044711	single-organism biosynthetic process	BP	0.0240804917381726	Cpn60beta4//ATG4//ATPRFB//PCB2//AT3G51140//AT4G34090//AT4G26370//AtRbcX1//AT4G02530//ABA4//ATLOX1//NDF4//PDE326//AT1G14270//ATCXXS1//MAC3A//AT2G21860//PES1//BGLU46//ABC4//AT2G27740//AT2G03200
GO:0048582	positive regulation of post-embryonic de...	BP	0.0242968483471815	AtVGT1//FT
GO:0009965	leaf morphogenesis	BP	0.0244666543977561	ATG4//ATPRFB//PCB2//AT4G34090
GO:0006487	protein N-linked glycosylation	BP	0.0260833727111472	EMB2754//AT3G01620
GO:0006623	protein targeting to vacuole	BP	0.0279216053549561	EMB2754//AT3G47550
GO:0072665	protein localization to vacuole	BP	0.0279216053549561	EMB2754//AT3G47550
GO:0072666	establishment of protein localization to...	BP	0.0279216053549561	EMB2754//AT3G47550
GO:0051240	positive regulation of multicellular org...	BP	0.0317488118861694	AtVGT1//FT
GO:0051186	cofactor metabolic process	BP	0.0330632988175148	ATG4//PCB2//AT4G34090//AT4G02530//NDF4//PDE326//ABC4
GO:0007034	vacuolar transport	BP	0.0337356328741231	EMB2754//AT3G47550
GO:0051094	positive regulation of developmental pro...	BP	0.0337356328741231	AtVGT1//FT
GO:0006636	unsaturated fatty acid biosynthetic proc...	BP	0.0378504427531671	PCB2//AT4G02530
GO:0033559	unsaturated fatty acid metabolic process	BP	0.0378504427531671	PCB2//AT4G02530
GO:0048366	leaf development	BP	0.0398618293498307	ATG4//ATPRFB//PCB2//AT4G34090//ELP6
GO:0006778	porphyrin-containing compound metabolic ...	BP	0.0401298837285409	ATG4//PCB2//AT4G02530//PDE326
GO:0048731	system development	BP	0.0408641354964901	EMB2754//ATG4//ATPRFB//PCB2//AT3G51140//AT4G34090//FEY//AT4G26370//ELP6//ATLOX1//TMKL1//AtVGT1//LEA14//ARR7//FT//ABC4//LSH3//AT2G03200
GO:0033013	tetrapyrrole metabolic process	BP	0.0410337042505428	ATG4//PCB2//AT4G02530//PDE326
GO:0009657	plastid organization	BP	0.0423442173094518	ATG4//ATPRFB//AT3G51140//AT4G26370//AT4G02530//AT3G13180
GO:0009891	positive regulation of biosynthetic proc...	BP	0.0436176679841385	ATG4//ATPRFB//PCB2//AT5G04080//AT4G26370//TAC1
GO:0042180	cellular ketone metabolic process	BP	0.0437982361855339	AT3G63510//PDE326//ABC4
GO:0043085	positive regulation of catalytic activit...	BP	0.0437982361855339	Cpn60beta4//AT4G02530//TAC1
GO:0044093	positive regulation of molecular functio...	BP	0.0437982361855339	Cpn60beta4//AT4G02530//TAC1
GO:0016556	mRNA modification	BP	0.0451030346982538	Cpn60beta4//AT3G63510//ABC4
GO:0019637	organophosphate metabolic process	BP	0.0453431648294773	Cpn60beta4//ATG4//PCB2//AT4G34090//AT4G02530//NDF4//PDE326//AT1G14270//ATCXXS1//ABC4
GO:0048367	shoot system development	BP	0.046721452427087	ATG4//ATPRFB//PCB2//AT4G34090//AT4G26370//ELP6//AtVGT1//ARR7//FT//ABC4//LSH3
GO:0015979	photosynthesis	BP	0.0510528437193477	ATPRFB//AT4G02530//NDF4//AT1G14270//ABC4//OTP51
GO:0006091	generation of precursor metabolites and ...	BP	0.0549182903894047	ATPRFB//AT4G02530//NDF4//AT1G14270//MAC3A//ABC4//OTP51
GO:0045935	positive regulation of nucleobase-contai...	BP	0.0621335563256988	ATG4//ATPRFB//PCB2//AT4G26370//TAC1
GO:0051173	positive regulation of nitrogen compound...	BP	0.0621335563256988	ATG4//ATPRFB//PCB2//AT4G26370//TAC1
GO:0010103	stomatal complex morphogenesis	BP	0.0622339937960714	AT4G26370//AtVGT1//ABC4
GO:0042127	regulation of cell proliferation	BP	0.0686710058155495	AT3G51720//ELP6
GO:0044281	small molecule metabolic process	BP	0.0691825904282704	Cpn60beta4//ATG4//PCB2//AT3G63510//AT3G51140//AT4G34090//AT4G26370//AT4G02530//ABA4//ATLOX1//NDF4//PDE326//AT1G14270//ATCXXS1//MAC3A//AT2G21860//PES1//ABC4
GO:0006396	RNA processing	BP	0.0698585594181544	ATPRFB//PDE326//RPF2//AT1G51310//OTP51
GO:0010557	positive regulation of macromolecule bio...	BP	0.0698585594181544	ATG4//ATPRFB//PCB2//AT4G26370//TAC1
GO:0009944	polarity specification of adaxial/abaxia...	BP	0.0712996648518805	TMKL1//LSH3
GO:0031328	positive regulation of cellular biosynth...	BP	0.0718698535440282	ATG4//ATPRFB//PCB2//AT4G26370//TAC1
GO:0045017	glycerolipid biosynthetic process	BP	0.0734326354605639	Cpn60beta4//ATCXXS1//PES1
GO:0065001	specification of axis polarity	BP	0.0739607992995955	TMKL1//LSH3