GOID TERM ONTOLOGY pValue Genes GO:0071281 cellular response to iron ion BP 0.000134677707148353 ATFRD3//AtETR1//ACO1 GO:0071248 cellular response to metal ion BP 0.000243089678364978 ATFRD3//AtETR1//ACO1 GO:0071241 cellular response to inorganic substance BP 0.000491146320378847 ATFRD3//AtETR1//ACO1 GO:0010038 response to metal ion BP 0.00081447047145224 RBCL//ATMDAR2//ATPHS2//AT4G29480//CLT2//ATLTL1//ATFRD3//AtETR1//AtFBA1//AtMC4//ACO1 GO:0071478 cellular response to radiation BP 0.00130972172539558 PHYD//ATNDPK2//ATPIRIN1//AtHBP2 GO:0071482 cellular response to light stimulus BP 0.00130972172539558 PHYD//ATNDPK2//ATPIRIN1//AtHBP2 GO:0010035 response to inorganic substance BP 0.00174480605032096 RBCL//ATNDPK2//ATMDAR2//ATPIRIN1//ARP1//ATPHS2//AT4G29480//CLT2//ATLTL1//ATFRD3//AtETR1//ATSBT3.5//AT1G22440//AtFBA1//AtMC4//ACO1//AT2G27660 GO:0010017 red or far-red light signaling pathway BP 0.00203733052822141 PHYD//ATNDPK2//AtHBP2 GO:0071489 cellular response to red or far red ligh... BP 0.00257690036999256 PHYD//ATNDPK2//AtHBP2 GO:0071214 cellular response to abiotic stimulus BP 0.00284508429484609 PHYD//ATNDPK2//ATPIRIN1//ATSBT3.5//AtHBP2 GO:0010039 response to iron ion BP 0.00353846389628347 ATFRD3//AtETR1//ACO1 GO:1990267 response to transition metal nanoparticl... BP 0.00452166514853525 ATMDAR2//ATFRD3//AtETR1//ACO1 GO:0007602 phototransduction BP 0.00583841291077718 PHYD//ATNDPK2 GO:0009583 detection of light stimulus BP 0.00583841291077718 PHYD//ATNDPK2 GO:0009585 red, far-red light phototransduction BP 0.00583841291077718 PHYD//ATNDPK2 GO:0010167 response to nitrate BP 0.0059140296440896 ATPIRIN1//ATFRD3//AT1G22440//AtMC4//AT2G27660 GO:0042221 response to chemical BP 0.00651608067610625 RBCL//AT1G33600//EBF2//ACS5//ANAC102//ATNDPK2//AT5G13380//ATMDAR2//ATPIRIN1//ARP1//ATPHS2//AT4G32440//AT4G29480//CLT2//GASA2//EDA8//ATLTL1//ATFRD3//AtRLP30//SAUR27//AT1G12460//AT1G71140//AtETR1//ATSBT3.5//AT1G44760//AT1G01910//AT1G22440//AtFBA1//AtMC4//ACO1//AtHBP2//AT2G27660 GO:0015706 nitrate transport BP 0.00824538014133729 ATPIRIN1//ATFRD3//AT1G22440//AtMC4//AT2G27660 GO:0010033 response to organic substance BP 0.00852663031417124 RBCL//AT1G33600//EBF2//ACS5//ANAC102//ATNDPK2//AT5G13380//ATMDAR2//ATPIRIN1//ARP1//AT4G32440//AT4G29480//GASA2//EDA8//ATLTL1//ATFRD3//AtRLP30//SAUR27//AT1G12460//AtETR1//AT1G44760//AT1G01910//ACO1//AtHBP2//AT2G27660 GO:1902532 negative regulation of intracellular sig... BP 0.0108402554505395 EBF2//AtETR1 GO:0009582 detection of abiotic stimulus BP 0.0123031771198046 PHYD//ATNDPK2 GO:0034614 cellular response to reactive oxygen spe... BP 0.0123031771198046 ATFRD3//ACO1 GO:0001101 response to acid chemical BP 0.0133384138743777 RBCL//AT1G33600//ATPIRIN1//ARP1//ATPHS2//GASA2//EDA8//ATLTL1//ATFRD3//AtRLP30//AtETR1//ATSBT3.5//AT1G22440//AtMC4//ACO1//AT2G27660 GO:0002218 activation of innate immune response BP 0.013847241791217 ADF4//AtRLP30 GO:0002253 activation of immune response BP 0.013847241791217 ADF4//AtRLP30 GO:0009639 response to red or far red light BP 0.0164070273582993 PHYD//ATNDPK2//EDA8//TSA1//AtFBA1//AtHBP2 GO:1902531 regulation of intracellular signal trans... BP 0.0189477728649806 EBF2//AtETR1 GO:0010106 cellular response to iron ion starvation BP 0.0218173319450269 ATPIRIN1//ATFRD3//AT1G22440 GO:0045089 positive regulation of innate immune res... BP 0.0227204042549827 ADF4//AtRLP30 GO:0046686 response to cadmium ion BP 0.0236651093777267 RBCL//ATMDAR2//ATPHS2//AT4G29480//CLT2//AtFBA1//AtMC4 GO:0009719 response to endogenous stimulus BP 0.024340853509673 RBCL//AT1G33600//EBF2//ACS5//ATNDPK2//AT5G13380//ATMDAR2//ATPIRIN1//ARP1//AT4G32440//GASA2//EDA8//ATFRD3//AtRLP30//SAUR27//AtETR1//AT2G27660 GO:0002684 positive regulation of immune system pro... BP 0.0247131538634596 ADF4//AtRLP30 GO:0009804 coumarin metabolic process BP 0.0247131538634596 ATMDAR2//AtMC4 GO:0009805 coumarin biosynthetic process BP 0.0247131538634596 ATMDAR2//AtMC4 GO:0034599 cellular response to oxidative stress BP 0.0247131538634596 ATFRD3//ACO1 GO:0050778 positive regulation of immune response BP 0.0247131538634596 ADF4//AtRLP30 GO:0009581 detection of external stimulus BP 0.0267745923484812 PHYD//ATNDPK2 GO:0031349 positive regulation of defense response BP 0.0267745923484812 ADF4//AtRLP30 GO:0006826 iron ion transport BP 0.0272678855261612 ATPIRIN1//ATFRD3//AT1G22440 GO:0009725 response to hormone BP 0.0293335051651866 RBCL//AT1G33600//EBF2//ACS5//ATNDPK2//AT5G13380//ATMDAR2//ATPIRIN1//ARP1//GASA2//EDA8//ATFRD3//AtRLP30//SAUR27//AtETR1 GO:0006820 anion transport BP 0.029352286309132 ATPIRIN1//CLT2//ATFRD3//AT1G74010//AT1G01910//AT1G22440//AtMC4//AT2G27660 GO:0009144 purine nucleoside triphosphate metabolic... BP 0.0360051482398757 ATNDPK2//SDH2-2//AT4G29480 GO:0009199 ribonucleoside triphosphate metabolic pr... BP 0.0360051482398757 ATNDPK2//SDH2-2//AT4G29480 GO:0009205 purine ribonucleoside triphosphate metab... BP 0.0360051482398757 ATNDPK2//SDH2-2//AT4G29480 GO:0015698 inorganic anion transport BP 0.0368959324238902 ATPIRIN1//ATFRD3//AT1G22440//AtMC4//AT2G27660 GO:0009141 nucleoside triphosphate metabolic proces... BP 0.0373576392348641 ATNDPK2//SDH2-2//AT4G29480 GO:1901700 response to oxygen-containing compound BP 0.0376759716289837 RBCL//AT1G33600//ATNDPK2//ATPIRIN1//ARP1//ATPHS2//AT4G32440//GASA2//EDA8//ATLTL1//ATFRD3//AtRLP30//SAUR27//AtETR1//ATSBT3.5//AT1G22440//AtMC4//ACO1//AtHBP2//AT2G27660 GO:0009968 negative regulation of signal transducti... BP 0.0404942877533332 EBF2//AtETR1 GO:0010648 negative regulation of cell communicatio... BP 0.0404942877533332 EBF2//AtETR1 GO:0023057 negative regulation of signaling BP 0.0404942877533332 EBF2//AtETR1 GO:0006855 drug transmembrane transport BP 0.0429914021312738 ATFRD3//AT1G71140 GO:0015893 drug transport BP 0.0455446190061845 ATFRD3//AT1G71140 GO:0033993 response to lipid BP 0.0459659914159481 RBCL//ATPIRIN1//ARP1//GASA2//EDA8//AtRLP30//SAUR27//AtETR1//ACO1 GO:0042493 response to drug BP 0.0481524795549188 ATFRD3//AT1G71140 GO:0042744 hydrogen peroxide catabolic process BP 0.0508135492051944 ATMDAR2//AtFBA1 GO:1900140 regulation of seedling development BP 0.0508135492051944 ARP1//AtETR1 GO:0009860 pollen tube growth BP 0.0515005144201583 AT3G62640//AT3G10540//ATROPGEF12//ATCNGC8 GO:0009150 purine ribonucleotide metabolic process BP 0.0522821385938627 ATNDPK2//SDH2-2//AT4G29480 GO:0007623 circadian rhythm BP 0.0539115584705694 PHYD//EBF2//AtETR1 GO:0048511 rhythmic process BP 0.0539115584705694 PHYD//EBF2//AtETR1 GO:0046128 purine ribonucleoside metabolic process BP 0.0555652649748871 ATNDPK2//SDH2-2//AT4G29480 GO:0042278 purine nucleoside metabolic process BP 0.0572430872062734 ATNDPK2//SDH2-2//AT4G29480 GO:0010089 xylem development BP 0.0591020236189102 ATXTH20//ACO1 GO:0071369 cellular response to ethylene stimulus BP 0.0606703723345172 EBF2//ATFRD3//AtETR1 GO:0009856 pollination BP 0.0617853182546394 AT3G62640//AT3G10540//ATROPGEF12//ATCNGC8//AT1G11340 GO:0044706 multi-multicellular organism process BP 0.0617853182546394 AT3G62640//AT3G10540//ATROPGEF12//ATCNGC8//AT1G11340 GO:0007154 cell communication BP 0.0640055189478245 PHYD//AT1G33600//EBF2//ANAC102//ATNDPK2//ADF4//AT5G49770//ATPIRIN1//AT4G29480//EDA8//ATFRD3//AtRLP30//AT1G12460//AtETR1//ATSBT3.5//AT1G22440//AT1G11340//AtHBP2 GO:0009267 cellular response to starvation BP 0.0654048623319582 ATPIRIN1//ATFRD3//ATSBT3.5//AT1G22440 GO:0051606 detection of stimulus BP 0.067806319991173 PHYD//ATNDPK2//AtETR1 GO:0042594 response to starvation BP 0.0709023101544894 ATPIRIN1//ATFRD3//ATSBT3.5//AT1G22440 GO:0009119 ribonucleoside metabolic process BP 0.0715118771140195 ATNDPK2//SDH2-2//AT4G29480 GO:0048443 stamen development BP 0.0715118771140195 AT3G62960//ATGRX4//AT1G12460 GO:0048466 androecium development BP 0.0715118771140195 AT3G62960//ATGRX4//AT1G12460 GO:0031669 cellular response to nutrient levels BP 0.0766303245652026 ATPIRIN1//ATFRD3//ATSBT3.5//AT1G22440 GO:0044257 cellular protein catabolic process BP 0.0780301780906121 EBF2//AT4G29480//AT1G66650//TUB5//AT1G01910//AtFBA1 GO:0009756 carbohydrate mediated signaling BP 0.0800518049011349 EDA8//AtETR1 GO:0010182 sugar mediated signaling pathway BP 0.0800518049011349 EDA8//AtETR1 GO:0006163 purine nucleotide metabolic process BP 0.0811638652987428 ATNDPK2//SDH2-2//AT4G29480 GO:0009142 nucleoside triphosphate biosynthetic pro... BP 0.0832100933832094 ATNDPK2//AT4G29480 GO:0009145 purine nucleoside triphosphate biosynthe... BP 0.0832100933832094 ATNDPK2//AT4G29480 GO:0009201 ribonucleoside triphosphate biosynthetic... BP 0.0832100933832094 ATNDPK2//AT4G29480 GO:0009206 purine ribonucleoside triphosphate biosy... BP 0.0832100933832094 ATNDPK2//AT4G29480 GO:0048653 anther development BP 0.0832100933832094 AT3G62960//ATGRX4 GO:0030163 protein catabolic process BP 0.0855322672384139 EBF2//AT4G29480//AT1G66650//TUB5//AT1G01910//AtFBA1 GO:0009116 nucleoside metabolic process BP 0.0872125299401025 ATNDPK2//SDH2-2//AT4G29480 GO:0010087 phloem or xylem histogenesis BP 0.0896388165100688 ATXTH20//ACO1 GO:0031667 response to nutrient levels BP 0.0919332258112216 ATPIRIN1//ATFRD3//ATSBT3.5//AT1G22440 GO:0071322 cellular response to carbohydrate stimul... BP 0.0929069729511082 EDA8//AtETR1 GO:0048584 positive regulation of response to stimu... BP 0.0962095065993469 ADF4//AtRLP30 GO:0048868 pollen tube development BP 0.0967900747466126 AT3G62640//AT3G10540//ATROPGEF12//ATCNGC8 GO:0006811 ion transport BP 0.100638547928826 PHYD//ATPIRIN1//AT4G29480//CLT2//ATFRD3//AT1G74010//AT1G01910//AT1G22440//AT1G54110//AtMC4//AT2G27660 GO:0002239 response to oomycetes BP 0.101866899992108 154_ GO:0017014 protein nitrosylation BP 0.101866899992108 015_ GO:0018119 peptidyl-cysteine S-nitrosylation BP 0.101866899992108 015_ GO:0045185 maintenance of protein location BP 0.101866899992108 458_ GO:0002237 response to molecule of bacterial origin BP 0.10291336293703 AT1G12460//AtETR1 GO:0042451 purine nucleoside biosynthetic process BP 0.10291336293703 ATNDPK2//AT4G29480 GO:0046129 purine ribonucleoside biosynthetic proce... BP 0.10291336293703 ATNDPK2//AT4G29480 GO:0051235 maintenance of location BP 0.10291336293703 EYE//EDA8 GO:0019374 galactolipid metabolic process BP 0.106312561511015 ATSBT3.5//AT1G73160