GOID	TERM	ONTOLOGY	pValue	Genes
GO:0006661	phosphatidylinositol biosynthetic proces...	BP	0.00873999408800314	AT1G57540//AT3G52070//MDO1
GO:0045165	cell fate commitment	BP	0.020791532621651	TTA1//ATRING1B
GO:0000723	telomere maintenance	BP	0.022075488959573	MDO1//ATRING1B
GO:0032200	telomere organization	BP	0.022075488959573	MDO1//ATRING1B
GO:0060249	anatomical structure homeostasis	BP	0.022075488959573	MDO1//ATRING1B
GO:0019827	stem cell maintenance	BP	0.0261178572160273	MDO1//ATRING1B
GO:0009690	cytokinin metabolic process	BP	0.0275271115367653	ATCKX3//RGLG4
GO:0048863	stem cell differentiation	BP	0.0275271115367653	MDO1//ATRING1B
GO:0048864	stem cell development	BP	0.0275271115367653	MDO1//ATRING1B
GO:0046488	phosphatidylinositol metabolic process	BP	0.0301514661245875	AT1G57540//AT3G52070//MDO1
GO:0045596	negative regulation of cell differentiat...	BP	0.0319332772998678	MDO1//ATRING1B
GO:0046474	glycerophospholipid biosynthetic process	BP	0.0326647238974695	AT1G57540//AT3G52070//MDO1
GO:0010089	xylem development	BP	0.0334598382395049	CYCD4;1//AHP6
GO:0045017	glycerolipid biosynthetic process	BP	0.0389417081796897	AT1G57540//AT3G52070//MDO1
GO:0009086	methionine biosynthetic process	BP	0.0415050451781229	AT1G57540//ARAC3
GO:0034754	cellular hormone metabolic process	BP	0.043774711078223	ATCKX3//ATR4//RGLG4
GO:0006555	methionine metabolic process	BP	0.0449069749194206	AT1G57540//ARAC3
GO:0010087	phloem or xylem histogenesis	BP	0.0520063757623069	CYCD4;1//AHP6
GO:0006766	vitamin metabolic process	BP	0.0594770202017097	ATPDX1//ATR4
GO:0009067	aspartate family amino acid biosynthetic...	BP	0.0594770202017097	AT1G57540//ARAC3
GO:0010224	response to UV-B	BP	0.0613995779028722	ATPDX1//CYP84A1
GO:0008654	phospholipid biosynthetic process	BP	0.0655096802621968	AT1G57540//AT3G52070//ATR4//MDO1
GO:0042343	indole glucosinolate metabolic process	BP	0.0697353159693632	534_
GO:0010817	regulation of hormone levels	BP	0.0710641261361086	ATCKX3//ATR4//RGLG4//CYP711A1
GO:0065008	regulation of biological quality	BP	0.0740806801097257	ATCKX3//ATGLR3.6//ATR4//MDO1//AT3G26720//RGLG4//ATRING1B//CYP711A1
GO:0007186	G-protein coupled receptor signaling pat...	BP	0.0764389971735754	106_
GO:0010223	secondary shoot formation	BP	0.0764389971735754	380_
GO:0010346	shoot axis formation	BP	0.0764389971735754	380_
GO:0009066	aspartate family amino acid metabolic pr...	BP	0.0775088858351566	AT1G57540//ARAC3
GO:0009699	phenylpropanoid biosynthetic process	BP	0.0775088858351566	CYP84A1//CYP711A1
GO:0008380	RNA splicing	BP	0.078572767409599	AT1G57540//AT5G19030//ARAC3
GO:0000394	RNA splicing, via endonucleolytic cleava...	BP	0.0796079575042497	AT1G57540//ARAC3
GO:0006650	glycerophospholipid metabolic process	BP	0.0798939300790495	AT1G57540//AT3G52070//MDO1
GO:0001763	morphogenesis of a branching structure	BP	0.0830949851824881	380_
GO:0045736	negative regulation of cyclin-dependent ...	BP	0.0830949851824881	190_
GO:0048869	cellular developmental process	BP	0.0850757945667742	CYCD4;1//ARAC3//MDO1//AT3G26720//AT3G26870//PTF1//TTA1//ATRING1B//AGL30
GO:0006863	purine nucleobase transport	BP	0.0881782269812208	ATCSLG1//AT1G07025
GO:0015851	nucleobase transport	BP	0.0881782269812208	ATCSLG1//AT1G07025
GO:0000162	tryptophan biosynthetic process	BP	0.0897036149326048	534_
GO:0016050	vesicle organization	BP	0.0897036149326048	971_
GO:0046219	indolalkylamine biosynthetic process	BP	0.0897036149326048	534_
GO:0009735	response to cytokinin	BP	0.090362537946825	KNAT3//AHP6
GO:0046486	glycerolipid metabolic process	BP	0.0922149052546185	AT1G57540//AT3G52070//MDO1
GO:0009593	detection of chemical stimulus	BP	0.0962652190389959	930_
GO:0072525	pyridine-containing compound biosyntheti...	BP	0.0962652190389959	091_
GO:0009694	jasmonic acid metabolic process	BP	0.0992565436407942	ATR4//PTF1
GO:0042445	hormone metabolic process	BP	0.100842774172524	ATCKX3//ATR4//RGLG4
GO:0006874	cellular calcium ion homeostasis	BP	0.102780127811174	106_
GO:0052482	defense response by cell wall thickening	BP	0.102780127811174	534_
GO:0052544	defense response by callose deposition i...	BP	0.102780127811174	534_
GO:0045595	regulation of cell differentiation	BP	0.103792988238974	MDO1//ATRING1B
GO:0009308	amine metabolic process	BP	0.106769603902769	ATCKX3//ATR4//RGLG4
GO:0055074	calcium ion homeostasis	BP	0.109248669268861	106_
GO:0006644	phospholipid metabolic process	BP	0.115102892446454	AT1G57540//AT3G52070//ATR4//MDO1
GO:0009269	response to desiccation	BP	0.122047950964604	581_
GO:0009682	induced systemic resistance	BP	0.122047950964604	534_
GO:0007015	actin filament organization	BP	0.122476145005925	ARAC3//AT3G26720
GO:0045786	negative regulation of cell cycle	BP	0.128379335933609	190_
GO:0000096	sulfur amino acid metabolic process	BP	0.128541060537404	AT1G57540//ARAC3//ATR4
GO:0044550	secondary metabolite biosynthetic proces...	BP	0.128541060537404	CYP84A1//ATR4//CYP711A1
GO:0030154	cell differentiation	BP	0.128997280750229	ARAC3//MDO1//AT3G26720//AT3G26870//PTF1//TTA1//ATRING1B
GO:0000079	regulation of cyclin-dependent protein s...	BP	0.134665643080828	190_
GO:0006897	endocytosis	BP	0.134665643080828	880_
GO:0048468	cell development	BP	0.137214941644367	ARAC3//MDO1//AT3G26720//AT3G26870//ATRING1B
GO:0046700	heterocycle catabolic process	BP	0.139980015565579	ATR4//AT3G26580//GC6
GO:0010440	stomatal lineage progression	BP	0.140907189209892	190_
GO:0044270	cellular nitrogen compound catabolic pro...	BP	0.141642024021562	ATR4//AT3G26580//GC6
GO:0051093	negative regulation of developmental pro...	BP	0.141905554678326	MDO1//ATRING1B
GO:0030036	actin cytoskeleton organization	BP	0.14686279849497	ARAC3//AT3G26720
GO:0048284	organelle fusion	BP	0.14710428892705	971_
GO:0019439	aromatic compound catabolic process	BP	0.148356673341487	ATR4//AT3G26580//GC6
GO:0009108	coenzyme biosynthetic process	BP	0.15185580625995	ATPDX1//ATR4
GO:0009698	phenylpropanoid metabolic process	BP	0.154365092204423	CYP84A1//CYP711A1
GO:1901361	organic cyclic compound catabolic proces...	BP	0.1586200661083	ATR4//AT3G26580//GC6
GO:0009646	response to absence of light	BP	0.159366396653881	091_
GO:0009804	coumarin metabolic process	BP	0.159366396653881	380_
GO:0009805	coumarin biosynthetic process	BP	0.159366396653881	380_
GO:0009809	lignin biosynthetic process	BP	0.159366396653881	088_
GO:0071901	negative regulation of protein serine/th...	BP	0.159366396653881	190_
GO:0071554	cell wall organization or biogenesis	BP	0.163673893167553	AT1G58070//AT5G20860//CYCD4;1//ATR4//AT3G26720//atfut4
GO:0006469	negative regulation of protein kinase ac...	BP	0.165432023024002	190_
GO:0033673	negative regulation of kinase activity	BP	0.165432023024002	190_
GO:0040034	regulation of development, heterochronic	BP	0.165432023024002	129_
GO:0051348	negative regulation of transferase activ...	BP	0.165432023024002	190_
GO:0090407	organophosphate biosynthetic process	BP	0.170270602945716	AT1G57540//ATPDX1//AT3G52070//ATR4//MDO1
GO:0001933	negative regulation of protein phosphory...	BP	0.171454439732683	190_
GO:0009309	amine biosynthetic process	BP	0.171454439732683	534_
GO:0009880	embryonic pattern specification	BP	0.171454439732683	845_
GO:0042326	negative regulation of phosphorylation	BP	0.171454439732683	190_
GO:0042401	cellular biogenic amine biosynthetic pro...	BP	0.171454439732683	534_
GO:0043247	telomere maintenance in response to DNA ...	BP	0.171454439732683	086_
GO:0072503	cellular divalent inorganic cation homeo...	BP	0.171454439732683	106_
GO:0001708	cell fate specification	BP	0.177433950622842	845_
GO:0007033	vacuole organization	BP	0.177433950622842	971_
GO:0009106	lipoate metabolic process	BP	0.177433950622842	534_
GO:0031400	negative regulation of protein modificat...	BP	0.177433950622842	190_
GO:0042364	water-soluble vitamin biosynthetic proce...	BP	0.177433950622842	091_
GO:0015994	chlorophyll metabolic process	BP	0.179869321654348	ATPDX1//AT3G26580
GO:0006767	water-soluble vitamin metabolic process	BP	0.183370857428747	091_
GO:0010563	negative regulation of phosphorus metabo...	BP	0.183370857428747	190_