GOID TERM ONTOLOGY pValue Genes GO:1901607 alpha-amino acid biosynthetic process BP 0.000320905235379 AT5G08430//AT5G19940//AGP25//AT5G13980//AT3G54080//ATMTAN1//PSAD-1//TROL//ATGHBDH//AT3G19515//JAL35//PGDH//AT1G15710//AT1G32470//PSAF//AT1G22790//LIP1//ADT3//AT2G19940 GO:1901566 organonitrogen compound biosynthetic pro... BP 0.000444598343693465 AT1G67700//ELIP2//AT5G08430//AT5G19940//AT5G53490//AT5G47030//AGP25//PSY//AT5G13980//HCEF1//AT3G54080//ATMTAN1//CHLM//PSAD-1//AT4G02120//TROL//AT1G13750//AT3G19120//ATGHBDH//AT3G19515//JAL35//PGDH//ATPC2//AT1G15710//AT1G32470//PSAF//LSMT-L//ATNUDT15//AtRIBA2//AT1G22790//LIP1//ADT3//AT2G19940 GO:0043933 macromolecular complex subunit organizat... BP 0.000457623272946841 AT2G26500//AT1G67700//AT5G08430//ATCKA1//AT5G57950//NAP1;3//ATKCO1//WYR//AT5G47030//ATSWC6//AT5G13980//ATINO80//HCEF1//AT3G53650//AT3G47650//ATDCL3//SAMC1//PSAD-1//TROL//RIC1//PSBTN//ATGHBDH//AT1G77770//AT1G52220//AGD2//AtGIP2//AT1G32470//LPA19//ATUBC1//AtCPB//AT2G28720//AT1G31150//SKU6//AT1G05020 GO:0044283 small molecule biosynthetic process BP 0.000536617897711498 AT5G08430//AT5G19940//MAP1D//AAO2//AT5G25440//CRCK1//AT5G53490//AACT1//AT5G38020//AGP25//PSY//AT5G13980//APG1//AT3G54080//ATMTAN1//AT4G29270//ATCPK4//PSAD-1//TROL//AT1G18060//AT1G13750//ATGHBDH//AT3G19515//VTC4//PUB24//AT3G01830//JAL35//PGDH//AT1G15710//AT1G32470//PSAF//LSMT-L//AT2G04680//AtRIBA2//AT1G22790//AT2G17650//LIP1//ATDET2//ADT3//ATKAO2//AT2G19940//RLK//AT2G34810//AT2G30550 GO:0008652 cellular amino acid biosynthetic process BP 0.000565904923347559 AT5G08430//AT5G19940//AGP25//AT5G13980//AT3G54080//ATMTAN1//PSAD-1//TROL//ATGHBDH//AT3G19515//JAL35//PGDH//AT1G15710//AT1G32470//PSAF//LSMT-L//AT1G22790//LIP1//ADT3//AT2G19940 GO:0016053 organic acid biosynthetic process BP 0.000597582749487416 AT5G08430//AT5G19940//AAO2//AT5G25440//CRCK1//AT5G53490//AT5G38020//AGP25//PSY//AT5G13980//AT3G54080//ATMTAN1//ATCPK4//PSAD-1//TROL//AT1G13750//ATGHBDH//AT3G19515//VTC4//PUB24//AT3G01830//JAL35//PGDH//AT1G15710//AT1G32470//PSAF//LSMT-L//AT1G22790//AT2G17650//LIP1//ADT3//ATKAO2//AT2G19940//RLK//AT2G34810//AT2G30550 GO:0046394 carboxylic acid biosynthetic process BP 0.000597582749487416 AT5G08430//AT5G19940//AAO2//AT5G25440//CRCK1//AT5G53490//AT5G38020//AGP25//PSY//AT5G13980//AT3G54080//ATMTAN1//ATCPK4//PSAD-1//TROL//AT1G13750//ATGHBDH//AT3G19515//VTC4//PUB24//AT3G01830//JAL35//PGDH//AT1G15710//AT1G32470//PSAF//LSMT-L//AT1G22790//AT2G17650//LIP1//ADT3//ATKAO2//AT2G19940//RLK//AT2G34810//AT2G30550 GO:1901135 carbohydrate derivative metabolic proces... BP 0.000792314611515068 AT1G67700//ATFXG1//AT5G19940//AT5G17530//AT5G15680//AT5G66250//AT5G53490//AT5G47030//PSY//APG1//HCEF1//AT3G47650//ATMTAN1//CHLM//AT4G02120//TROL//GAE3//AT1G18060//AT3G19120//ATGHBDH//PPR40//VTC4//ATPC2//AT1G32470//ATMUM4//LPA19//PSRP3/1//AT1G34300//LSMT-L//ATNUDT15//AT1G11730//AtBE2//AT2G13290//LIP1//AT2G30930//AT2G30550 GO:0000097 sulfur amino acid biosynthetic process BP 0.00083509107374569 AT5G08430//AT5G19940//AGP25//AT5G13980//AT3G54080//ATMTAN1//PSAD-1//TROL//ATGHBDH//AT3G19515//JAL35//AT1G32470//PSAF//AT1G22790//LIP1 GO:0044272 sulfur compound biosynthetic process BP 0.00116438006037096 ATFXG1//AT5G08430//AT5G19940//AGP25//AT5G13980//APG1//AT3G54080//ATMTAN1//PSAD-1//TROL//ATGHBDH//AT3G19515//VTC4//JAL35//AT1G32470//PSAF//AT1G22790//AtBE2//LIP1//AT2G30930 GO:0071822 protein complex subunit organization BP 0.00127873677130855 AT2G26500//AT1G67700//AT5G57950//NAP1;3//ATKCO1//AT5G47030//AT5G13980//HCEF1//AT3G53650//AT3G47650//SAMC1//PSAD-1//TROL//RIC1//PSBTN//ATGHBDH//AT1G77770//AT1G52220//AtGIP2//AT1G32470//LPA19//AtCPB//AT2G28720//AT1G31150//SKU6//AT1G05020 GO:0006364 rRNA processing BP 0.00136301446760106 AT2G26500//AT1G67700//AT5G53490//HCEF1//AT3G47650//SAMC1//CHLM//PSAD-1//TROL//PSBTN//AT1G52220//AT1G32470 GO:0016072 rRNA metabolic process BP 0.00146132379046472 AT2G26500//AT1G67700//AT5G53490//HCEF1//AT3G47650//SAMC1//CHLM//PSAD-1//TROL//PSBTN//AT1G52220//AT1G32470 GO:0006996 organelle organization BP 0.00146204731418744 AT2G26500//AT1G67700//AT5G08430//ATCKA1//NAP1;3//ATKCO1//WYR//AT5G53490//AT5G47030//ATSWC6//FIM2//AT5G13980//AT5G13770//AT5G07630//ATINO80//HCEF1//AT3G53650//AT3G47650//ATDCL3//SAMC1//TCP2//PSAD-1//ATSYP42//TROL//BRCA2(IV)//RIC1//AT1G18060//PMI2//PSBTN//ATGHBDH//JAL35//AT1G52220//AGD2//AtGIP2//AT1G32470//AtAO1//ATUBC1//AtCPB//PSRP3/1//LSMT-L//ERMO3//AT2G28720//AT1G31150//SKU6//AtMC4//AT1G05020 GO:0009657 plastid organization BP 0.00158347710675567 AT2G26500//AT1G67700//AT5G53490//AT5G13770//HCEF1//AT3G47650//SAMC1//TCP2//PSAD-1//TROL//AT1G18060//PMI2//PSBTN//AT1G52220//AT1G32470//PSRP3/1//LSMT-L GO:0044281 small molecule metabolic process BP 0.00160630696875703 AT1G67700//ATFXG1//WCRKC2//AT5G08430//AT5G19940//MAP1D//AAO2//AT5G17530//AT5G25440//CRCK1//AT5G53490//AACT1//AT5G47030//AT5G38020//AGP25//PSY//AT5G13980//APG1//HCEF1//AT3G54080//AT3G49160//AT3G47650//ATMTAN1//AT4G29270//CHLM//ATCPK4//PSAD-1//AT4G02120//TROL//GAE3//AT1G18060//AT1G13750//AT3G19120//ATGHBDH//PPR40//AT3G19515//VTC4//ATH9//PUB24//AT3G01830//ATGLCAK//JAL35//PGDH//ATPC2//AT1G15710//AT1G77770//AT1G32470//ATMUM4//AT1G48430//LPA19//ATCXXS1//PSRP3/1//PSAF//LSMT-L//ATNUDT15//5PTASE13//AT2G04680//AtRIBA2//AT1G22790//AtBE2//AT2G17650//LIP1//ATDET2//AT2G38920//ADT3//ATKAO2//AT2G19940//RLK//AT2G30930//AT2G34810//AT2G30550 GO:0006461 protein complex assembly BP 0.00168084710068151 AT2G26500//AT1G67700//AT5G57950//NAP1;3//ATKCO1//AT5G47030//AT5G13980//HCEF1//AT3G53650//AT3G47650//SAMC1//PSAD-1//TROL//PSBTN//ATGHBDH//AT1G77770//AT1G52220//AtGIP2//AT1G32470//LPA19//AtCPB//AT2G28720//AT1G31150//AT1G05020 GO:0070271 protein complex biogenesis BP 0.00174512983283502 AT2G26500//AT1G67700//AT5G57950//NAP1;3//ATKCO1//AT5G47030//AT5G13980//HCEF1//AT3G53650//AT3G47650//SAMC1//PSAD-1//TROL//PSBTN//ATGHBDH//AT1G77770//AT1G52220//AtGIP2//AT1G32470//LPA19//AtCPB//AT2G28720//AT1G31150//AT1G05020 GO:0090407 organophosphate biosynthetic process BP 0.00188003936096362 AT1G67700//AT5G17530//AT5G53490//AT5G47030//AT5G22875//PSY//APG1//AT3G47650//CHLM//AT4G02120//TROL//AT1G18060//AT3G19120//ATGHBDH//VTC4//ATPC2//AT1G35430//ATMUM4//ATUBC1//ATCXXS1//PSRP3/1//LSMT-L//ATNUDT15//LIP1 GO:0010207 photosystem II assembly BP 0.00189870754526358 AT2G26500//AT1G67700//HCEF1//AT3G47650//SAMC1//PSAD-1//TROL//PSBTN//AT1G52220//AT1G32470//LPA19 GO:0006790 sulfur compound metabolic process BP 0.00192370586350499 ATFXG1//AT5G08430//AT5G19940//OXP1//AGP25//AT5G13980//APG1//AT3G54080//AtCAM7//ATMTAN1//PSAD-1//TROL//ATGHBDH//AT3G19515//VTC4//JAL35//AT1G32470//PSAF//ATNUDT15//AT1G22790//AtBE2//LIP1//AT2G30930 GO:0019682 glyceraldehyde-3-phosphate metabolic pro... BP 0.00201887996647946 AT1G67700//AT5G53490//AT5G47030//PSY//APG1//HCEF1//AT3G47650//CHLM//TROL//AT1G18060//ATGHBDH//AT1G32470//LPA19//PSRP3/1//LSMT-L//LIP1 GO:0051640 organelle localization BP 0.00207135063690547 AT1G67700//AT5G04170//FIM2//HCEF1//SAMC1//TROL//PMI2//LSMT-L//ATMYO5 GO:0042254 ribosome biogenesis BP 0.0022445966111603 AT2G26500//AT1G67700//AT5G53490//HCEF1//AT3G47650//SAMC1//CHLM//PSAD-1//TROL//PSBTN//AT1G52220//AT1G32470//AT2G40010 GO:0065003 macromolecular complex assembly BP 0.00225695363148601 AT2G26500//AT1G67700//AT5G57950//NAP1;3//ATKCO1//AT5G47030//AT5G13980//HCEF1//AT3G53650//AT3G47650//SAMC1//PSAD-1//TROL//PSBTN//ATGHBDH//AT1G77770//AT1G52220//AtGIP2//AT1G32470//LPA19//AtCPB//AT2G28720//AT1G31150//AT1G05020 GO:0034622 cellular macromolecular complex assembly BP 0.0026882760320749 AT2G26500//AT1G67700//AT5G57950//NAP1;3//AT5G47030//AT5G13980//HCEF1//AT3G53650//AT3G47650//SAMC1//PSAD-1//TROL//PSBTN//ATGHBDH//AT1G77770//AT1G52220//AtGIP2//AT1G32470//LPA19//AtCPB//AT2G28720//AT1G31150//AT1G05020 GO:0000096 sulfur amino acid metabolic process BP 0.00270760656041581 AT5G08430//AT5G19940//AGP25//AT5G13980//AT3G54080//ATMTAN1//PSAD-1//TROL//ATGHBDH//AT3G19515//JAL35//AT1G32470//PSAF//AT1G22790//LIP1 GO:0022613 ribonucleoprotein complex biogenesis BP 0.00283486416722106 AT2G26500//AT1G67700//AT5G53490//HCEF1//AT3G47650//SAMC1//CHLM//PSAD-1//TROL//PSBTN//AT1G52220//AT1G32470//AT2G40010 GO:0006796 phosphate-containing compound metabolic ... BP 0.00296411410464552 AT1G67700//AT4G17410//AT5G19940//AT5G17530//AT5G25440//ATCKA1//AT5G60280//AT5G53490//AT5G47030//PR5K//AT5G22875//PSY//RUL1//APG1//ATCRR3//HCEF1//AT3G47650//AT3G46370//AT3G45390//SAMC1//AT4G39110//AT4G28350//CHLM//AT4G24810//AT-RLK3//CRK34//ATCPK4//PSAD-1//AT4G02420//AT4G02120//TROL//GAE3//RKF1//AT1G18060//PSBTN//AT3G19120//AT3G17090//ATGHBDH//PPR40//VTC4//PUB24//AT3G01830//ATPC2//AT1G52220//AT1G35430//AT1G32470//ATMUM4//LPA19//PLL5//ATUBC1//ATCXXS1//PSRP3/1//AT1G34300//LSMT-L//ATNUDT15//GWD//5PTASE13//AT1G69990//LIP1//RLK//AT2G19230 GO:0034470 ncRNA processing BP 0.00336520510015255 AT2G26500//AT1G67700//AT5G53490//HCEF1//AT3G47650//SAMC1//CHLM//PSAD-1//TROL//PSBTN//AT1G52220//AT1G32470 GO:0019637 organophosphate metabolic process BP 0.00361453763286633 AT1G67700//AT5G17530//AT5G53490//AT5G47030//AT5G22875//PSY//APG1//HCEF1//AT3G47650//CHLM//AT4G02120//TROL//GAE3//AT1G18060//AT3G19120//ATGHBDH//PPR40//VTC4//ATPC2//AT1G35430//AT1G32470//ATMUM4//LPA19//ATUBC1//ATCXXS1//PSRP3/1//LSMT-L//ATNUDT15//5PTASE13//LIP1 GO:0006793 phosphorus metabolic process BP 0.00379207061134248 AT1G67700//AT4G17410//AT5G19940//AT5G17530//AT5G25440//ATCKA1//AT5G60280//AT5G53490//AT5G47030//PR5K//AT5G22875//PSY//RUL1//APG1//ATCRR3//HCEF1//AT3G47650//AT3G46370//AT3G45390//AtCAM7//SAMC1//AT4G39110//AT4G28350//CHLM//AT4G24810//AT-RLK3//CRK34//ATCPK4//PSAD-1//AT4G02420//AT4G02120//TROL//GAE3//RKF1//AT1G18060//PSBTN//AT3G19120//AT3G17090//ATGHBDH//PPR40//VTC4//PUB24//AT3G01830//ATPC2//AT1G52220//AT1G35430//AT1G32470//ATMUM4//LPA19//PLL5//ATUBC1//ATCXXS1//PSRP3/1//AT1G34300//LSMT-L//ATNUDT15//GWD//5PTASE13//AT1G69990//LIP1//RLK//AT2G19230 GO:0044711 single-organism biosynthetic process BP 0.00520661278106883 AT1G67700//ATFXG1//ELIP2//AT5G08430//AT5G19940//MAP1D//AAO2//AT5G17530//AT5G25440//CRCK1//AT5G57950//ATKCO1//AT5G53490//AACT1//AT5G47030//AT5G38020//AT5G22875//AGP25//PSY//AT5G13980//APG1//HCEF1//AT3G54080//AT3G47650//SAMC1//ATMTAN1//AT4G29270//CHLM//ATCPK4//PSAD-1//AT4G02120//TROL//AT1G18060//AT1G13750//AT3G19120//ATGHBDH//AT3G19515//VTC4//PUB24//AT3G01830//JAL35//PGDH//ATPC2//AT1G15710//CCOAMT//AT1G35430//AT2G43530//AT1G32470//ATMUM4//ATUBC1//ATCXXS1//PSRP3/1//PSAF//LSMT-L//ATNUDT15//GWD//AT2G04680//SKU6//AtRIBA2//AtMC4//AT1G22790//ATREV3//PG2//AtBE2//AT2G17650//LIP1//ATDET2//ADT3//ATKAO2//AT2G19940//RLK//AT2G30930//AT2G34810//AT2G30550 GO:0019288 isopentenyl diphosphate biosynthetic pro... BP 0.0056812591403765 AT1G67700//AT5G53490//PSY//APG1//AT3G47650//CHLM//TROL//ATGHBDH//PSRP3/1//LSMT-L//LIP1 GO:0006081 cellular aldehyde metabolic process BP 0.00581240582931314 AT1G67700//AT5G53490//AT5G47030//PSY//APG1//HCEF1//AT3G47650//CHLM//TROL//AT1G18060//ATGHBDH//VTC4//AT1G32470//LPA19//PSRP3/1//LSMT-L//LIP1 GO:0071840 cellular component organization or bioge... BP 0.0062694568726933 AT2G26500//AT1G67700//AT5G08430//AT5G25440//ATCKA1//AT5G57950//NAP1;3//ATKCO1//WYR//AT5G53490//AT5G53820//AT5G47030//ATSWC6//FIM2//AGP25//AT5G13980//AT5G13770//AT5G07630//ATINO80//ATCRR3//HCEF1//AT3G53650//AT3G47650//ATDCL3//SAMC1//AT4G39110//COW1//ATEXPB3//CHLM//TCP2//RIC10//PSAD-1//ATSYP42//TROL//ATEXP17//ATHAM3//BRCA2(IV)//RIC1//AT1G18060//PMI2//PSBTN//ATGHBDH//PUB24//AT3G01830//AT3G10260//ATGLCAK//JAL35//PGDH//AT1G77770//AT1G64370//AT1G52220//AGD2//AtGIP2//AT1G32470//AtAO1//LPA19//PLL5//ATUBC1//AtCPB//AT1G50120//AT1G11370//LEA7//PSRP3/1//LSMT-L//FUT7//ERMO3//5PTASE13//AT2G28720//ATRAB-H1D//AT1G31150//AtXTH32//SKU6//AtMC4//PG2//AT1G05020//RLK//AT2G30930//AT2G40010//AT2G30550 GO:0009117 nucleotide metabolic process BP 0.00654699282652415 AT5G17530//AT5G47030//HCEF1//AT3G47650//AT4G02120//TROL//GAE3//AT1G18060//AT3G19120//ATGHBDH//PPR40//ATPC2//AT1G32470//ATMUM4//LPA19//ATNUDT15//LIP1 GO:1901605 alpha-amino acid metabolic process BP 0.00672255105260721 AT5G08430//AT5G19940//AGP25//AT5G13980//AT3G54080//ATMTAN1//PSAD-1//TROL//AT1G13750//ATGHBDH//AT3G19515//JAL35//PGDH//AT1G15710//AT1G32470//PSAF//AT1G22790//LIP1//ADT3//AT2G19940 GO:0009240 isopentenyl diphosphate biosynthetic pro... BP 0.00673652718542783 AT1G67700//AT5G53490//PSY//APG1//AT3G47650//CHLM//TROL//ATGHBDH//PSRP3/1//LSMT-L//LIP1 GO:0046490 isopentenyl diphosphate metabolic proces... BP 0.00673652718542783 AT1G67700//AT5G53490//PSY//APG1//AT3G47650//CHLM//TROL//ATGHBDH//PSRP3/1//LSMT-L//LIP1 GO:0006753 nucleoside phosphate metabolic process BP 0.00680795270179219 AT5G17530//AT5G47030//HCEF1//AT3G47650//AT4G02120//TROL//GAE3//AT1G18060//AT3G19120//ATGHBDH//PPR40//ATPC2//AT1G32470//ATMUM4//LPA19//ATNUDT15//LIP1 GO:0015995 chlorophyll biosynthetic process BP 0.00689194676085456 AT1G67700//ELIP2//AT5G53490//PSY//HCEF1//CHLM//TROL//LIP1 GO:0016043 cellular component organization BP 0.00720618446712085 AT2G26500//AT1G67700//AT5G08430//AT5G25440//ATCKA1//AT5G57950//NAP1;3//ATKCO1//WYR//AT5G53490//AT5G53820//AT5G47030//ATSWC6//FIM2//AT5G13980//AT5G13770//AT5G07630//ATINO80//ATCRR3//HCEF1//AT3G53650//AT3G47650//ATDCL3//SAMC1//AT4G39110//COW1//ATEXPB3//TCP2//RIC10//PSAD-1//ATSYP42//TROL//ATEXP17//ATHAM3//BRCA2(IV)//RIC1//AT1G18060//PMI2//PSBTN//ATGHBDH//PUB24//AT3G01830//AT3G10260//JAL35//PGDH//AT1G77770//AT1G64370//AT1G52220//AGD2//AtGIP2//AT1G32470//AtAO1//LPA19//PLL5//ATUBC1//AtCPB//AT1G11370//LEA7//PSRP3/1//LSMT-L//ERMO3//5PTASE13//AT2G28720//ATRAB-H1D//AT1G31150//SKU6//AtMC4//PG2//AT1G05020//RLK//AT2G30930//AT2G30550 GO:0034660 ncRNA metabolic process BP 0.00725406553674827 AT2G26500//AT1G67700//AT5G53490//HCEF1//AT3G47650//SAMC1//CHLM//PSAD-1//TROL//PSBTN//AT1G52220//AT1G32470//LSMT-L GO:0055086 nucleobase-containing small molecule met... BP 0.00745270151296416 AT5G17530//AT5G47030//HCEF1//AT3G47650//ATMTAN1//AT4G02120//TROL//GAE3//AT1G18060//AT3G19120//ATGHBDH//PPR40//ATPC2//AT1G32470//ATMUM4//LPA19//ATNUDT15//LIP1 GO:0009070 serine family amino acid biosynthetic pr... BP 0.00752130468725665 AT5G19940//AGP25//AT5G13980//PSAD-1//TROL//ATGHBDH//JAL35//PGDH//AT1G32470//PSAF//LIP1 GO:0043623 cellular protein complex assembly BP 0.00770527108095899 AT2G26500//AT1G67700//AT5G57950//AT5G47030//AT5G13980//HCEF1//AT3G47650//SAMC1//PSAD-1//TROL//PSBTN//ATGHBDH//AT1G77770//AT1G52220//AtGIP2//AT1G32470//LPA19//AtCPB//AT1G31150//AT1G05020 GO:1901564 organonitrogen compound metabolic proces... BP 0.00771923040708782 AT1G67700//ELIP2//AT5G08430//AT5G19940//AT5G53490//AT5G47030//PR5K//OXP1//AGP25//PSY//AT5G13980//HCEF1//AT3G54080//AT3G47650//ATMTAN1//AT4G34880//CHLM//PSAD-1//AT4G02120//TROL//AT1G18060//AT1G13750//AT3G19120//ATGHBDH//PPR40//AT3G19515//JAL35//PGDH//ATPC2//AT1G15710//AT1G32470//LPA19//PSAF//LSMT-L//ATNUDT15//AtRIBA2//AT1G22790//LSH7//LIP1//AT2G42490//ADT3//AT2G19940 GO:0010212 response to ionizing radiation BP 0.00782987446184378 ATCKA1//BRCA2(IV)//DAN1//ATREV3 GO:0006281 DNA repair BP 0.00900529640485589 ATCKA1//NAP1;3//ATINO80//AT3G48900//BRCA2(IV)//DAN1//AtAO1//ATUBC1//ATREV3 GO:0022607 cellular component assembly BP 0.0096432590379952 AT2G26500//AT1G67700//AT5G57950//NAP1;3//ATKCO1//AT5G47030//AT5G13980//HCEF1//AT3G53650//AT3G47650//SAMC1//PSAD-1//TROL//RIC1//PSBTN//ATGHBDH//AT1G77770//AT1G52220//AtGIP2//AT1G32470//LPA19//AtCPB//LSMT-L//AT2G28720//AT1G31150//AT1G05020 GO:0015979 photosynthesis BP 0.0106474174416089 AT2G26500//AT1G67700//AT5G19940//LHCB3//AT5G53490//HCEF1//AT3G47650//SAMC1//CHLM//PSAD-1//TROL//PSBTN//AT1G52220//AT1G32470//LPA19//PSAF//AT2G28605 GO:0016311 dephosphorylation BP 0.0108416631301859 AT4G17410//AT5G19940//HCEF1//SAMC1//PSAD-1//TROL//PSBTN//AT3G17090//AT1G52220//5PTASE13//RLK GO:0006470 protein dephosphorylation BP 0.0112864730067454 AT4G17410//AT5G19940//HCEF1//SAMC1//PSAD-1//TROL//PSBTN//AT3G17090//AT1G52220//RLK GO:0006644 phospholipid metabolic process BP 0.0118355678429347 AT1G67700//AT5G53490//AT5G22875//PSY//APG1//AT3G47650//CHLM//TROL//ATGHBDH//VTC4//AT1G35430//ATUBC1//ATCXXS1//PSRP3/1//LSMT-L//5PTASE13//LIP1 GO:0035304 regulation of protein dephosphorylation BP 0.0120138680294378 AT5G19940//HCEF1//SAMC1//PSAD-1//TROL//PSBTN//AT1G52220//RLK GO:0008299 isoprenoid biosynthetic process BP 0.0122541140499246 AT1G67700//MAP1D//AAO2//AT5G53490//AACT1//PSY//APG1//HCEF1//AT3G47650//CHLM//TROL//ATGHBDH//PSRP3/1//LSMT-L//AT2G17650//LIP1//ATKAO2 GO:0009066 aspartate family amino acid metabolic pr... BP 0.0133707929104152 AT5G08430//AT3G54080//ATMTAN1//AT3G19515//AT1G15710//AT1G22790 GO:0009225 nucleotide-sugar metabolic process BP 0.0143150012481092 AT5G17530//GAE3//ATMUM4 GO:0035303 regulation of dephosphorylation BP 0.0145179684718522 AT5G19940//HCEF1//SAMC1//PSAD-1//TROL//PSBTN//AT1G52220//RLK GO:0019344 cysteine biosynthetic process BP 0.0146479323166476 AT5G19940//AGP25//AT5G13980//PSAD-1//TROL//ATGHBDH//JAL35//AT1G32470//PSAF//LIP1 GO:0009086 methionine biosynthetic process BP 0.0152696579757907 AT5G08430//AT3G54080//ATMTAN1//AT3G19515//AT1G22790 GO:0006534 cysteine metabolic process BP 0.0154014342642334 AT5G19940//AGP25//AT5G13980//PSAD-1//TROL//ATGHBDH//JAL35//AT1G32470//PSAF//LIP1 GO:0009902 chloroplast relocation BP 0.0157267985144439 AT1G67700//HCEF1//SAMC1//TROL//PMI2//LSMT-L GO:0019750 chloroplast localization BP 0.0157267985144439 AT1G67700//HCEF1//SAMC1//TROL//PMI2//LSMT-L GO:0051644 plastid localization BP 0.0157267985144439 AT1G67700//HCEF1//SAMC1//TROL//PMI2//LSMT-L GO:0051667 establishment of plastid localization BP 0.0157267985144439 AT1G67700//HCEF1//SAMC1//TROL//PMI2//LSMT-L GO:0044085 cellular component biogenesis BP 0.0162334278533564 AT2G26500//AT1G67700//AT5G57950//NAP1;3//ATKCO1//AT5G53490//AT5G47030//AGP25//AT5G13980//HCEF1//AT3G53650//AT3G47650//SAMC1//CHLM//PSAD-1//TROL//RIC1//PSBTN//ATGHBDH//ATGLCAK//AT1G77770//AT1G52220//AtGIP2//AT1G32470//LPA19//AtCPB//AT1G50120//LSMT-L//FUT7//AT2G28720//AT1G31150//AtXTH32//PG2//AT1G05020//AT2G40010 GO:0008654 phospholipid biosynthetic process BP 0.0163065278532608 AT1G67700//AT5G53490//AT5G22875//PSY//APG1//AT3G47650//CHLM//TROL//ATGHBDH//AT1G35430//ATUBC1//ATCXXS1//PSRP3/1//LSMT-L//LIP1 GO:0051656 establishment of organelle localization BP 0.0183556017157048 AT1G67700//HCEF1//SAMC1//TROL//PMI2//LSMT-L GO:0009616 virus induced gene silencing BP 0.0184198034849855 AT5G08430//ATINO80//ATDCL3//AT3G19515//AGD2 GO:0052018 modulation by symbiont of RNA levels in ... BP 0.0184198034849855 AT5G08430//ATINO80//ATDCL3//AT3G19515//AGD2 GO:0052249 modulation of RNA levels in other organi... BP 0.0184198034849855 AT5G08430//ATINO80//ATDCL3//AT3G19515//AGD2 GO:0098586 cellular response to virus BP 0.0184198034849855 AT5G08430//ATINO80//ATDCL3//AT3G19515//AGD2 GO:0006779 porphyrin-containing compound biosynthet... BP 0.0184210322133708 AT1G67700//ELIP2//AT5G53490//PSY//HCEF1//CHLM//TROL//LIP1 GO:0006974 cellular response to DNA damage stimulus BP 0.0188502105650347 ATCKA1//NAP1;3//ATINO80//AT3G48900//BRCA2(IV)//DAN1//AtAO1//ATUBC1//ATREV3 GO:0006720 isoprenoid metabolic process BP 0.0194296825415015 AT1G67700//MAP1D//AAO2//AT5G53490//AACT1//PSY//APG1//HCEF1//AT3G47650//CHLM//TROL//ATGHBDH//PSRP3/1//LSMT-L//AT2G17650//LIP1//ATKAO2 GO:0045087 innate immune response BP 0.0194842116790971 RPP5//AT5G08430//AT5G25440//CRCK1//AtcwINV6//ATINO80//ATCRR3//ATDCL3//ATTLP1//AT-RLK3//ATCPK4//TROL//AT1G13750//AT3G19515//PUB24//AT3G01830//AT3G10260//PGDH//AT1G64370//AGD2//PLL5//SCPL51//RLK//AT2G30930//ACD11//AT2G30550 GO:0006555 methionine metabolic process BP 0.0201441020697366 AT5G08430//AT3G54080//ATMTAN1//AT3G19515//AT1G22790 GO:0006955 immune response BP 0.0204143029944762 RPP5//AT5G08430//AT5G25440//CRCK1//AtcwINV6//ATINO80//ATCRR3//ATDCL3//ATTLP1//AT-RLK3//ATCPK4//TROL//AT1G13750//AT3G19515//PUB24//AT3G01830//AT3G10260//PGDH//AT1G64370//AGD2//PLL5//SCPL51//RLK//AT2G30930//ACD11//AT2G30550 GO:0033014 tetrapyrrole biosynthetic process BP 0.0206314146631925 AT1G67700//ELIP2//AT5G53490//PSY//HCEF1//CHLM//TROL//LIP1 GO:0009067 aspartate family amino acid biosynthetic... BP 0.0219707598427285 AT5G08430//AT3G54080//ATMTAN1//AT3G19515//AT1G22790 GO:0009069 serine family amino acid metabolic proce... BP 0.0225524890592364 AT5G19940//AGP25//AT5G13980//PSAD-1//TROL//ATGHBDH//JAL35//PGDH//AT1G32470//PSAF//LIP1 GO:0019684 photosynthesis, light reaction BP 0.0233241922909691 AT2G26500//AT1G67700//AT5G19940//LHCB3//HCEF1//AT3G47650//SAMC1//PSAD-1//TROL//PSBTN//AT1G52220//AT1G32470//LPA19 GO:0009165 nucleotide biosynthetic process BP 0.0249452253141184 AT5G17530//AT5G47030//AT4G02120//AT3G19120//ATPC2//ATMUM4//ATNUDT15 GO:1901293 nucleoside phosphate biosynthetic proces... BP 0.0249452253141184 AT5G17530//AT5G47030//AT4G02120//AT3G19120//ATPC2//ATMUM4//ATNUDT15 GO:0061024 membrane organization BP 0.0251005033463101 AT1G67700//AT5G25440//AT5G53490//ATCRR3//HCEF1//SAMC1//TROL//AT1G18060//PUB24//AT3G01830//AT3G10260//PGDH//AT1G64370//PLL5//LSMT-L//AT1G05020//RLK//AT2G30930//AT2G30550 GO:0010087 phloem or xylem histogenesis BP 0.0259388970225924 AT5G38020//RUL1//TBL36//5PTASE13//ATMYO5 GO:0035821 modification of morphology or physiology... BP 0.0259388970225924 AT5G08430//ATINO80//ATDCL3//AT3G19515//AGD2 GO:0044003 modification by symbiont of host morphol... BP 0.0259388970225924 AT5G08430//ATINO80//ATDCL3//AT3G19515//AGD2 GO:0051817 modification of morphology or physiology... BP 0.0259388970225924 AT5G08430//ATINO80//ATDCL3//AT3G19515//AGD2 GO:0006520 cellular amino acid metabolic process BP 0.026213342485119 AT5G08430//AT5G19940//AGP25//AT5G13980//AT3G54080//ATMTAN1//PSAD-1//TROL//AT1G13750//ATGHBDH//AT3G19515//JAL35//PGDH//AT1G15710//AT1G32470//PSAF//LSMT-L//AT1G22790//LIP1//ADT3//AT2G19940 GO:0010054 trichoblast differentiation BP 0.026908657627495 AtXTH12//AtXTH13//AT5G24313//COW1//AT4G25790//AtG3Pp2//ATHAM3//RALFL27//AT2G04680//SKU6//AtMC4//PG2//ATMLO15 GO:0007267 cell-cell signaling BP 0.0303436352960326 ATINO80//ATDCL3//RALFL27//AGD2 GO:0010050 vegetative phase change BP 0.0303436352960326 AT5G08430//ATDCL3//AT3G19515//AGD2 GO:0080135 regulation of cellular response to stres... BP 0.0303541248385158 AT5G25440//ATCKA1//ATINO80//ATCRR3//TROL//PUB24//AT3G01830//AT3G10260//PGDH//AT1G64370//PLL5//RLK//AT2G30930//AT2G30550 GO:0051645 Golgi localization BP 0.0315217445510756 AT5G04170//FIM2//ATMYO5 GO:0051646 mitochondrion localization BP 0.0315217445510756 AT5G04170//FIM2//ATMYO5 GO:0060151 peroxisome localization BP 0.0315217445510756 AT5G04170//FIM2//ATMYO5 GO:0010053 root epidermal cell differentiation BP 0.033021965105164 AtXTH12//AtXTH13//AT5G24313//COW1//AT4G25790//AtG3Pp2//ATHAM3//RALFL27//AT2G04680//SKU6//AtMC4//PG2//ATMLO15