GOID	TERM	ONTOLOGY	pValue	Genes
GO:0010017	red or far-red light signaling pathway	BP	0.000720953370029479	FAR1//ATHB-2//PIF5//FBI1
GO:0071489	cellular response to red or far red ligh...	BP	0.000720953370029479	FAR1//ATHB-2//PIF5//FBI1
GO:0006464	cellular protein modification process	BP	0.00113152788901748	FAR1//KINESIN-12A//AT5G19880//AtCRLK2//AT5G63905//AT5G61350//AT5G59270//AT5G58410//SRT1//ATCPSF160//AT5G49780//XRI//AT5G22450//AT5G03320//LECRKA4.3//ATHLECRK//ATMND1//AT4G28670//AT4G25390//AT4G24480//AT4G20450//AT4G13160//UBI10//CRK41//CCT//CPK33//RST1//ATRAPTOR1B//CDC48C//FBI1//PUB43//AT1G67880//AtPERK13//ABCA1//AT1G50410//HYP7//I9H//AT2G16250//ANAC003//CPK19//AHK3//LRR//ARSK1
GO:0036211	protein modification process	BP	0.00113152788901748	FAR1//KINESIN-12A//AT5G19880//AtCRLK2//AT5G63905//AT5G61350//AT5G59270//AT5G58410//SRT1//ATCPSF160//AT5G49780//XRI//AT5G22450//AT5G03320//LECRKA4.3//ATHLECRK//ATMND1//AT4G28670//AT4G25390//AT4G24480//AT4G20450//AT4G13160//UBI10//CRK41//CCT//CPK33//RST1//ATRAPTOR1B//CDC48C//FBI1//PUB43//AT1G67880//AtPERK13//ABCA1//AT1G50410//HYP7//I9H//AT2G16250//ANAC003//CPK19//AHK3//LRR//ARSK1
GO:0006486	protein glycosylation	BP	0.00156541587285355	AT5G58410//AT5G22450//CCT//RST1//ATRAPTOR1B//AT1G67880//ABCA1//AT1G50410//I9H
GO:0009101	glycoprotein biosynthetic process	BP	0.00156541587285355	AT5G58410//AT5G22450//CCT//RST1//ATRAPTOR1B//AT1G67880//ABCA1//AT1G50410//I9H
GO:0043413	macromolecule glycosylation	BP	0.00156541587285355	AT5G58410//AT5G22450//CCT//RST1//ATRAPTOR1B//AT1G67880//ABCA1//AT1G50410//I9H
GO:0009100	glycoprotein metabolic process	BP	0.00163352086377228	AT5G58410//AT5G22450//CCT//RST1//ATRAPTOR1B//AT1G67880//ABCA1//AT1G50410//I9H
GO:0070085	glycosylation	BP	0.00177686726310529	AT5G58410//AT5G22450//CCT//RST1//ATRAPTOR1B//AT1G67880//ABCA1//AT1G50410//I9H
GO:0010413	glucuronoxylan metabolic process	BP	0.00280945915858796	AT5G47530//AT3G43220//RST1//AT1G50410//I9H//TBL30//AT2G01460
GO:0045492	xylan biosynthetic process	BP	0.00295194507066666	AT5G47530//AT3G43220//RST1//AT1G50410//I9H//TBL30//AT2G01460
GO:0009555	pollen development	BP	0.00320239773386796	KINESIN-12A//BBX29//XRI//ATMND1//ATGSL01//KINESIN-12B//I9H//DAA1//ATGSL08
GO:0071478	cellular response to radiation	BP	0.00322099931744713	FAR1//ATHB-2//PIF5//FBI1
GO:0071482	cellular response to light stimulus	BP	0.00322099931744713	FAR1//ATHB-2//PIF5//FBI1
GO:0045491	xylan metabolic process	BP	0.00341278590393904	AT5G47530//AT3G43220//RST1//AT1G50410//I9H//TBL30//AT2G01460
GO:0043412	macromolecule modification	BP	0.00358513428730099	FAR1//KINESIN-12A//AT5G19880//AtCRLK2//AT5G24840//AT5G63905//AT5G61350//AT5G59270//AT5G58410//SRT1//ATCPSF160//AT5G49780//XRI//AT5G22450//AT5G03320//LECRKA4.3//ATHLECRK//ATMND1//AT4G28670//AT4G25390//AT4G24480//AT4G20450//AT4G13160//UBI10//CRK41//CCT//CPK33//RST1//ATRAPTOR1B//CDC48C//FBI1//PUB43//AT1G67880//AtPERK13//ABCA1//AT1G50410//HYP7//I9H//AT2G16250//ANAC003//CPK19//AHK3//LRR//ARSK1
GO:0044038	cell wall macromolecule biosynthetic pro...	BP	0.00392658348867598	AT5G47530//AT3G43220//RST1//AT1G50410//I9H//TBL30//AT2G01460
GO:0070589	cellular component macromolecule biosynt...	BP	0.00392658348867598	AT5G47530//AT3G43220//RST1//AT1G50410//I9H//TBL30//AT2G01460
GO:0070592	cell wall polysaccharide biosynthetic pr...	BP	0.00392658348867598	AT5G47530//AT3G43220//RST1//AT1G50410//I9H//TBL30//AT2G01460
GO:0040034	regulation of development, heterochronic	BP	0.0048673861244606	BHLH134//CCT//ZFP5
GO:0010410	hemicellulose metabolic process	BP	0.0053526327638427	AT5G47530//AT3G43220//RST1//AT1G50410//I9H//TBL30//AT2G01460
GO:0006897	endocytosis	BP	0.00632489052976347	ERMO1//AT4G09940//ATPP2-A3
GO:1901137	carbohydrate derivative biosynthetic pro...	BP	0.00791327791915836	AT5G58410//AtNUDT11//AT5G22450//AST68//AHA7//PIF5//CCT//AT3G17770//RST1//ATRAPTOR1B//AT1G67880//ABCA1//AT1G50410//I9H//AHA10
GO:0010016	shoot system morphogenesis	BP	0.00814069798530607	ATHB-2//BLH2//PIF5//ZPR3//TPR2//RST1//ATRAPTOR1B//AT2G16250//LRR
GO:0000278	mitotic cell cycle	BP	0.00894386256582248	FAR1//KINESIN-12A//AT5G58410//ATMND1//TPR2//KINESIN-12B//ATRAPTOR1B//CDC48C//HYP7//ABCC5
GO:0042546	cell wall biogenesis	BP	0.00943399731608142	AT5G47530//AT3G43220//RST1//AT1G50410//I9H//FUT7//ATFUT6//TBL30//AT2G01460
GO:0007049	cell cycle	BP	0.0097714956210283	FAR1//KINESIN-12A//AT5G58410//XRI//ATMND1//ATGSL01//TPR2//KINESIN-12B//RST1//AT3G03130//ATRAPTOR1B//CDC48C//HYP7//ATGSL08//ABCC5
GO:0046434	organophosphate catabolic process	BP	0.00994933110062557	AtNUDT11//AT3G43220//5PTASE13
GO:0006487	protein N-linked glycosylation	BP	0.0102022865690366	CCT//ATRAPTOR1B//AT1G67880//ABCA1//AT1G50410
GO:0055046	microgametogenesis	BP	0.0110085828356197	KINESIN-12A//KINESIN-12B//DAA1
GO:0000911	cytokinesis by cell plate formation	BP	0.012014436627359	KINESIN-12A//AT5G58410//TPR2//KINESIN-12B//ATRAPTOR1B//ABCC5
GO:0032506	cytokinetic process	BP	0.012014436627359	KINESIN-12A//AT5G58410//TPR2//KINESIN-12B//ATRAPTOR1B//ABCC5
GO:1902410	mitotic cytokinetic process	BP	0.012014436627359	KINESIN-12A//AT5G58410//TPR2//KINESIN-12B//ATRAPTOR1B//ABCC5
GO:0007623	circadian rhythm	BP	0.0124642827982029	FAR1//PIF5//ATGSL01//FBI1//AHK3
GO:0048511	rhythmic process	BP	0.0124642827982029	FAR1//PIF5//ATGSL01//FBI1//AHK3
GO:0007602	phototransduction	BP	0.0137819561337333	PIF5//FBI1
GO:0009585	red, far-red light phototransduction	BP	0.0137819561337333	PIF5//FBI1
GO:0000281	mitotic cytokinesis	BP	0.0140616034923292	KINESIN-12A//AT5G58410//TPR2//KINESIN-12B//ATRAPTOR1B//ABCC5
GO:0045893	positive regulation of transcription, DN...	BP	0.0142539822678526	BZIP17//FAR1//XRI//ATERF-5//PIF5//ATMND1//CDC48C//HYP7//AT1G04380
GO:0051254	positive regulation of RNA metabolic pro...	BP	0.0142539822678526	BZIP17//FAR1//XRI//ATERF-5//PIF5//ATMND1//CDC48C//HYP7//AT1G04380
GO:1902680	positive regulation of RNA biosynthetic ...	BP	0.0142539822678526	BZIP17//FAR1//XRI//ATERF-5//PIF5//ATMND1//CDC48C//HYP7//AT1G04380
GO:1903508	positive regulation of nucleic acid-temp...	BP	0.0142539822678526	BZIP17//FAR1//XRI//ATERF-5//PIF5//ATMND1//CDC48C//HYP7//AT1G04380
GO:0010383	cell wall polysaccharide metabolic proce...	BP	0.0146460737044599	AT5G47530//AT3G43220//RST1//AT1G50410//I9H//TBL30//AT2G01460
GO:0071214	cellular response to abiotic stimulus	BP	0.015044253488795	FAR1//ATHB-2//PIF5//AT3G17770//FBI1
GO:0061640	cytoskeleton-dependent cytokinesis	BP	0.0151714057145975	KINESIN-12A//AT5G58410//TPR2//KINESIN-12B//ATRAPTOR1B//ABCC5
GO:0045935	positive regulation of nucleobase-contai...	BP	0.0162076328174781	BZIP17//FAR1//XRI//ATERF-5//PIF5//ATMND1//CDC48C//HYP7//AT1G04380
GO:0071554	cell wall organization or biogenesis	BP	0.0162976959224669	AT5G47530//ATEXO70C2//AT3G43220//AT4G18395//ATGSL01//RST1//AT1G50410//I9H//FUT7//ATFUT6//AT1G16360//5PTASE13//ZFP5//TBL30//ATRAB-H1D//ATGSL08//LCR10//AT2G01460
GO:0009583	detection of light stimulus	BP	0.0163585200755454	PIF5//FBI1
GO:0072348	sulfur compound transport	BP	0.0163585200755454	AST12//AST68
GO:0051173	positive regulation of nitrogen compound...	BP	0.0166208559683331	BZIP17//FAR1//XRI//ATERF-5//PIF5//ATMND1//CDC48C//HYP7//AT1G04380
GO:0043687	post-translational protein modification	BP	0.0167264117888621	XRI//ATMND1//CDC48C//HYP7
GO:0044036	cell wall macromolecule metabolic proces...	BP	0.0169784078724045	AT5G47530//AT3G43220//RST1//AT1G50410//I9H//ZFP5//TBL30//AT2G01460
GO:0055080	cation homeostasis	BP	0.0187427317730766	AST68//PIF5//HCC2//AHA10//ABCC5
GO:0048878	chemical homeostasis	BP	0.0188631291088576	AST68//PIF5//HCC2//AHA10//5PTASE13//ABCC5
GO:0055067	monovalent inorganic cation homeostasis	BP	0.0191228733146294	AHA10//ABCC5
GO:1901135	carbohydrate derivative metabolic proces...	BP	0.0192145704670867	AT5G58410//AtNUDT11//G6PD6//AT5G22450//AST68//AHA7//PIF5//CCT//AT3G17770//RST1//ATRAPTOR1B//AT1G67880//ABCA1//AT1G50410//I9H//AHA10//SDH1-2
GO:0048532	anatomical structure arrangement	BP	0.0194115170713994	AT5G58410//AT5G48800//ZPR3//TPR2//RST1//ATRAPTOR1B//ATGSL08
GO:0010628	positive regulation of gene expression	BP	0.0211881683872518	BZIP17//FAR1//XRI//ATERF-5//PIF5//ATMND1//CDC48C//HYP7//AT1G04380
GO:0010557	positive regulation of macromolecule bio...	BP	0.0216900717889782	BZIP17//FAR1//XRI//ATERF-5//PIF5//ATMND1//CDC48C//HYP7//AT1G04380
GO:0010212	response to ionizing radiation	BP	0.0219076740275955	FAR1//XRI//ATMND1//ATGSL08
GO:0009639	response to red or far red light	BP	0.0221589099142313	FAR1//ATHB-2//AT5G58410//BHLH134//PIF5//RST1//CDC48C//FBI1
GO:0044262	cellular carbohydrate metabolic process	BP	0.0233190079006423	AT5G47530//EXGT-A4//AT3G43220//ATGSL01//AT3G17770//RST1//AT1G50410//I9H//5PTASE13//TBL30//ATGSL08//BGAL13//AT2G01460
GO:0000910	cytokinesis	BP	0.0238953951698652	KINESIN-12A//AT5G58410//TPR2//KINESIN-12B//ATRAPTOR1B//ABCC5
GO:0048507	meristem development	BP	0.0240874875033777	AT5G58410//AT5G48800//BHLH134//ZPR3//TPR2//RST1//ATRAPTOR1B//ZFP5//ATGSL08//AHK3
GO:0033692	cellular polysaccharide biosynthetic pro...	BP	0.0243286667531252	AT5G47530//AT3G43220//ATGSL01//RST1//AT1G50410//I9H//TBL30//ATGSL08//AT2G01460
GO:0048229	gametophyte development	BP	0.0245921977464965	KINESIN-12A//BBX29//XRI//NRPC2//ATMND1//ATGSL01//KINESIN-12B//I9H//DAA1//ATGSL08
GO:0031328	positive regulation of cellular biosynth...	BP	0.0248826991134681	BZIP17//FAR1//XRI//ATERF-5//PIF5//ATMND1//CDC48C//HYP7//AT1G04380
GO:0010072	primary shoot apical meristem specificat...	BP	0.0251169905281581	TPR2//RST1//ATRAPTOR1B
GO:0009582	detection of abiotic stimulus	BP	0.0251874702195886	PIF5//FBI1
GO:0010604	positive regulation of macromolecule met...	BP	0.0283968836573775	BZIP17//FAR1//XRI//ATERF-5//PIF5//ATMND1//CDC48C//HYP7//AT1G04380
GO:0048506	regulation of timing of meristematic pha...	BP	0.0284744120375051	BHLH134//ZFP5
GO:0048510	regulation of timing of transition from ...	BP	0.0284744120375051	BHLH134//ZFP5
GO:0050801	ion homeostasis	BP	0.0288668240309727	AST68//PIF5//HCC2//AHA10//ABCC5
GO:0009150	purine ribonucleotide metabolic process	BP	0.0292921013872678	AtNUDT11//AHA7//AHA10//SDH1-2
GO:0042278	purine nucleoside metabolic process	BP	0.0292921013872678	AtNUDT11//AHA7//AHA10//SDH1-2
GO:0046128	purine ribonucleoside metabolic process	BP	0.0292921013872678	AtNUDT11//AHA7//AHA10//SDH1-2
GO:0071322	cellular response to carbohydrate stimul...	BP	0.0292921013872678	AT5G58410//RST1//5PTASE13//AHK3
GO:0031325	positive regulation of cellular metaboli...	BP	0.0315814282037136	BZIP17//FAR1//XRI//ATERF-5//PIF5//ATMND1//CDC48C//HYP7//AT1G04380
GO:0046838	phosphorylated carbohydrate dephosphoryl...	BP	0.0319225317186694	AT3G43220//5PTASE13
GO:0046855	inositol phosphate dephosphorylation	BP	0.0319225317186694	AT3G43220//5PTASE13
GO:0071545	inositol phosphate catabolic process	BP	0.0319225317186694	AT3G43220//5PTASE13
GO:0030003	cellular cation homeostasis	BP	0.0320435344069144	AST68//PIF5//AHA10//ABCC5
GO:0044723	single-organism carbohydrate metabolic p...	BP	0.0322126098257086	AT5G58410//AT5G47530//G6PD6//AT5G22450//AT3G43220//ATGSL01//CCT//AT3G17770//RST1//ATRAPTOR1B//AT1G67880//ABCA1//AT1G50410//I9H//5PTASE13//TBL30//ATGSL08//AtGolS4//BGAL13//GAUT2//AT2G01460
GO:0090421	embryonic meristem initiation	BP	0.032574574116947	TPR2//RST1//ATRAPTOR1B
GO:0006873	cellular ion homeostasis	BP	0.0379873778783198	AST68//PIF5//AHA10//ABCC5
GO:0006468	protein phosphorylation	BP	0.0383424197117943	AtCRLK2//AT5G61350//AT5G59270//AT5G49780//AT5G03320//LECRKA4.3//AT4G28670//AT4G25390//AT4G24480//AT4G20450//AT4G13160//CRK41//CPK33//AtPERK13//AT2G16250//CPK19//AHK3//LRR//ARSK1
GO:0034645	cellular macromolecule biosynthetic proc...	BP	0.0384803134710443	BZIP17//FAR1//KINESIN-12A//ATHB-2//AT5G19880//BLH2//AGL101//AT5G63905//AT5G61620//AT5G58410//SRT1//BBX29//XRI//AT5G47530//ATERF-5//NRPC2//AT5G22450//WRKY26//ATHLECRK//PIF5//ATEIF3C-1//ZPR3//AT3G43220//ATMND1//ATGSL01//LD//CCT//AtbZIP58//CPK33//RST1//AT3G03130//ATRAPTOR1B//CDC48C//ATMYBL2//AT1G67880//ABCA1//AT1G29160//AT1G50410//HYP7//I9H//ZFP5//TBL30//AT1G04380//ATGSL08//ANAC003//ANAC023//AHK3//LRR//AT2G01460
GO:0042451	purine nucleoside biosynthetic process	BP	0.0388416447566365	AtNUDT11//AHA7//AHA10
GO:0046129	purine ribonucleoside biosynthetic proce...	BP	0.0388416447566365	AtNUDT11//AHA7//AHA10
GO:0009152	purine ribonucleotide biosynthetic proce...	BP	0.0410571859001781	AtNUDT11//AHA7//AHA10
GO:1903047	mitotic cell cycle process	BP	0.0418633768887742	KINESIN-12A//AT5G58410//TPR2//KINESIN-12B//ATRAPTOR1B//ABCC5
GO:0010014	meristem initiation	BP	0.0432513773694089	AT5G48800//TPR2//RST1//ATRAPTOR1B//ATGSL08
GO:0048508	embryonic meristem development	BP	0.0433352470986625	TPR2//RST1//ATRAPTOR1B
GO:0009851	auxin biosynthetic process	BP	0.0445221616403625	AST68//PIF5//YUC8//AtYUC2
GO:1901659	glycosyl compound biosynthetic process	BP	0.04461361141612	AtNUDT11//AST68//AHA7//PIF5//AHA10
GO:0044264	cellular polysaccharide metabolic proces...	BP	0.0458283921467427	AT5G47530//EXGT-A4//AT3G43220//ATGSL01//RST1//AT1G50410//I9H//TBL30//ATGSL08//AT2G01460
GO:0006796	phosphate-containing compound metabolic ...	BP	0.0461589979742816	AtCRLK2//AT5G24840//AT5G63905//AT5G61350//AT5G59270//AT5G49780//XRI//AtNUDT11//G6PD6//AT5G18850//AT5G03320//LECRKA4.3//AHA7//PIF5//AT3G43220//AT4G28670//AT4G25390//AT4G24480//AT4G20450//AT4G13160//CRK41//CPK33//AtPERK13//AHA10//5PTASE13//AT2G16250//CPK19//AHK3//LRR//SDH1-2//ARSK1
GO:0009692	ethylene metabolic process	BP	0.0462482642727204	PIF5//AT4G25390//AT1G24140//AT2G32030
GO:0009693	ethylene biosynthetic process	BP	0.0462482642727204	PIF5//AT4G25390//AT1G24140//AT2G32030
GO:0043449	cellular alkene metabolic process	BP	0.0462482642727204	PIF5//AT4G25390//AT1G24140//AT2G32030