GOID	TERM	ONTOLOGY	pValue	Genes
GO:0048437	floral organ development	BP	3.74235698018664e-05	AtRGL3//AT5G25590//AT5G60140//WYR//AGL25//AGL21//ATSUFE//AGL19//ENDO3//SNI1//RGL2//AT1G63100//AT1G12180//AT2G40440
GO:0048569	post-embryonic organ development	BP	0.000118048015403224	RAP2.11//AtRGL3//AT5G25590//AT5G60140//WYR//AGL25//AGL21//ATSUFE//AGL19//ENDO3//SNI1//RGL2//AT1G63100//AT1G12180//AT2G40440
GO:0009908	flower development	BP	0.000347786164867007	CYCA1;1//AtRGL3//AT5G25590//AT5G60140//WYR//ATSWC6//AGL25//AGL21//ATSUFE//AGL19//ENDO3//SNI1//RGL2//AT1G63100//AT1G12180//AT2G40440
GO:0090567	reproductive shoot system development	BP	0.000417692481284152	CYCA1;1//AtRGL3//AT5G25590//AT5G60140//WYR//ATSWC6//AGL25//AGL21//ATSUFE//AGL19//ENDO3//SNI1//RGL2//AT1G63100//AT1G12180//AT2G40440
GO:0048440	carpel development	BP	0.000777393303333081	AT5G60140//AGL25//AGL21//ATSUFE//AGL19//ENDO3//AT1G12180
GO:0048467	gynoecium development	BP	0.00104901512782526	AT5G60140//AGL25//AGL21//ATSUFE//AGL19//ENDO3//AT1G12180
GO:0009886	post-embryonic morphogenesis	BP	0.00125920401639583	CYCA1;1//ATGER3//AtRGL3//AT5G25590//WYR//SNI1//RGL2//AT1G63100//AT1G12180//AT2G40440
GO:0048444	floral organ morphogenesis	BP	0.00133685287381115	AtRGL3//AT5G25590//WYR//SNI1//RGL2//AT1G63100//AT1G12180
GO:0048563	post-embryonic organ morphogenesis	BP	0.00133685287381115	AtRGL3//AT5G25590//WYR//SNI1//RGL2//AT1G63100//AT1G12180
GO:0006334	nucleosome assembly	BP	0.00218260286586449	AT5G12910//AT3G53650//AT1G08170//HIS1-3
GO:0034728	nucleosome organization	BP	0.00218260286586449	AT5G12910//AT3G53650//AT1G08170//HIS1-3
GO:0065004	protein-DNA complex assembly	BP	0.00271748547966628	AT5G12910//AT3G53650//AT1G08170//HIS1-3
GO:0071824	protein-DNA complex subunit organization	BP	0.00271748547966628	AT5G12910//AT3G53650//AT1G08170//HIS1-3
GO:0048608	reproductive structure development	BP	0.00290011210603153	AHL22//CYCA1;1//ATCESA7//AtRGL3//AT5G25590//AT5G60140//WYR//ATSWC6//AGL25//AGL21//ATSUFE//AGL19//ENDO3//SNI1//ATNCED5//ATECP31//RBL//RGL2//AT1G63100//AT1G12180//AT2G40440
GO:0061458	reproductive system development	BP	0.00290011210603153	AHL22//CYCA1;1//ATCESA7//AtRGL3//AT5G25590//AT5G60140//WYR//ATSWC6//AGL25//AGL21//ATSUFE//AGL19//ENDO3//SNI1//ATNCED5//ATECP31//RBL//RGL2//AT1G63100//AT1G12180//AT2G40440
GO:0031497	chromatin assembly	BP	0.00404397120674474	AT5G12910//AT3G53650//AT1G08170//HIS1-3
GO:0006261	DNA-dependent DNA replication	BP	0.00448920909239321	CYCA1;1//WYR//SNI1//AT1G20720//At-FANCM
GO:0006323	DNA packaging	BP	0.00456856734300023	AT5G12910//AT3G53650//AT1G08170//HIS1-3
GO:0048367	shoot system development	BP	0.00467803634508166	CYCA1;1//ATGER3//AtRGL3//AT5G25590//AT5G60140//WYR//ATSWC6//AGL25//AGL21//ATSUFE//AGL19//ENDO3//SNI1//RGL2//AT1G63100//AT1G12180//AT2G40440
GO:0048438	floral whorl development	BP	0.005543014820083	AT5G60140//WYR//AGL25//AGL21//ATSUFE//AGL19//ENDO3//AT1G63100//AT1G12180
GO:0009791	post-embryonic development	BP	0.00643620622363554	AHL22//CYCA1;1//RAP2.11//ATGER3//ATCESA7//AtRGL3//AT5G25590//AT5G60140//GAMT2//WYR//ATSWC6//AGL25//AGL21//ATSUFE//AGL19//ENDO3//SNI1//ATNCED5//ATECP31//RBL//RGL2//AT1G63100//AT1G12180//AT2G40440
GO:0010087	phloem or xylem histogenesis	BP	0.00712271792178933	DAR2//ATCESA7//AT5G60720//AtGH9B13
GO:0035670	plant-type ovary development	BP	0.00788282156634573	AT5G60140//AGL21//ATSUFE//ENDO3
GO:0048481	ovule development	BP	0.00788282156634573	AT5G60140//AGL21//ATSUFE//ENDO3
GO:0071103	DNA conformation change	BP	0.0086944147708292	AT5G12910//AT3G53650//AT1G08170//HIS1-3
GO:0044702	single organism reproductive process	BP	0.0108232251663475	CYCA1;1//AtRGL3//AT5G25590//AT5G60140//WYR//AT5G46770//ATSWC6//AGL25//AGL21//ATSUFE//ATSBT3.18//AGL19//ENDO3//SNI1//ATNCED5//ATECP31//RGL2//AT1G63100//AT1G12180//AGL66//AT2G40440
GO:0006270	DNA replication initiation	BP	0.010825468444339	CYCA1;1//WYR//SNI1
GO:0048506	regulation of timing of meristematic pha...	BP	0.0119508247135639	AGL19//SPL11
GO:0048510	regulation of timing of transition from ...	BP	0.0119508247135639	AGL19//SPL11
GO:0048441	petal development	BP	0.0119591905764882	AT5G60140//WYR//ENDO3//AT1G63100
GO:0048465	corolla development	BP	0.0119591905764882	AT5G60140//WYR//ENDO3//AT1G63100
GO:0003006	developmental process involved in reprod...	BP	0.0120319913632937	AHL22//CYCA1;1//ATCESA7//AtRGL3//AT5G25590//AT5G60140//WYR//AT5G46770//ATSWC6//AGL25//AGL21//ATSUFE//AGL19//ENDO3//SNI1//ATNCED5//ATECP31//RBL//RGL2//AT1G63100//AT1G12180//AGL66//AT2G40440
GO:0022414	reproductive process	BP	0.012361616698484	AHL22//CYCA1;1//ATCESA7//AtRGL3//AT5G25590//AT5G60140//WYR//AT5G46770//ATSWC6//AGL25//AGL21//ATSUFE//ATSBT3.18//AGL19//ENDO3//SNI1//ATNCED5//ATECP31//RBL//RGL2//AT1G63100//AT1G12180//AGL66//AT2G40440
GO:0048731	system development	BP	0.0127487154851622	DAR2//AHL22//CYCA1;1//RAP2.11//ATGER3//ATCESA7//AtRGL3//AT5G25590//AT5G60140//WYR//ATSWC6//AGL25//AT3G48940//AGL21//ATSUFE//AGL19//ENDO3//SNI1//ATNCED5//ATECP31//RBL//RGL2//AT1G63100//AT1G12180//AT1G50270//AT2G40440//SPL11
GO:0006333	chromatin assembly or disassembly	BP	0.0165474145169211	AT5G12910//AT3G53650//AT1G08170//HIS1-3
GO:0006325	chromatin organization	BP	0.0166205327769935	CYCA1;1//AT5G25590//WYR//ATSWC6//AT5G12910//AT3G53650//SNI1//AT1G08170//HIS1-3
GO:0010413	glucuronoxylan metabolic process	BP	0.0190953737110245	ATPRR1//ATCESA7//AT5G60720//PER64//AGL21
GO:0045492	xylan biosynthetic process	BP	0.0196398656819559	ATPRR1//ATCESA7//AT5G60720//PER64//AGL21
GO:0045491	xylan metabolic process	BP	0.0201944719326268	ATPRR1//ATCESA7//AT5G60720//PER64//AGL21
GO:2000241	regulation of reproductive process	BP	0.020583179975797	CYCA1;1//AT5G25590//WYR//ATSWC6//AGL25//SNI1//RGL2
GO:0009887	organ morphogenesis	BP	0.020605489052294	AtRGL3//AT5G25590//WYR//SNI1//RGL2//AT1G63100//AT1G12180//AT1G50270
GO:0040034	regulation of development, heterochronic	BP	0.0208491577072696	AGL19//SPL11
GO:0051276	chromosome organization	BP	0.0209727265922718	CYCA1;1//EMB2782//AT5G25590//WYR//ATSWC6//AT5G12910//AT3G53650//SNI1//AT1G08170//AT1G50270//HIS1-3
GO:0010089	xylem development	BP	0.0226747614341466	ATCESA7//AT5G60720//AtGH9B13
GO:0048513	organ development	BP	0.0236822146286706	DAR2//RAP2.11//AtRGL3//AT5G25590//AT5G60140//WYR//AGL25//AT3G48940//AGL21//ATSUFE//AGL19//ENDO3//SNI1//RGL2//AT1G63100//AT1G12180//AT1G50270//AT2G40440//SPL11
GO:0044038	cell wall macromolecule biosynthetic pro...	BP	0.0237381089441848	ATPRR1//ATCESA7//AT5G60720//PER64//AGL21
GO:0070589	cellular component macromolecule biosynt...	BP	0.0237381089441848	ATPRR1//ATCESA7//AT5G60720//PER64//AGL21
GO:0070592	cell wall polysaccharide biosynthetic pr...	BP	0.0237381089441848	ATPRR1//ATCESA7//AT5G60720//PER64//AGL21
GO:0010410	hemicellulose metabolic process	BP	0.0276612627823329	ATPRR1//ATCESA7//AT5G60720//PER64//AGL21
GO:0006260	DNA replication	BP	0.0317307266585189	CYCA1;1//WYR//SNI1//AT1G07270//AT1G20720//At-FANCM
GO:0019219	regulation of nucleobase-containing comp...	BP	0.0322910016326481	AT4G16610//CYCA1;1//bHLH115//AT5G25590//ARR6//AT5G60140//WYR//AT5G46010//AGL25//AGL21//RKD5//AGL19//SNI1//AtRLP46//AT1G12630//AT3G23870//AT1G63100//AFP1//At-FANCM//AGL66//AT1G60240//SPL11//RLK
GO:0009909	regulation of flower development	BP	0.0323644677704326	CYCA1;1//AT5G25590//WYR//ATSWC6//AGL25//SNI1
GO:0048646	anatomical structure formation involved ...	BP	0.0336566180038733	AT5G25590//WYR//SNI1//AT4G10440//AT1G63100//AGL66
GO:2000026	regulation of multicellular organismal d...	BP	0.0340084138909774	CYCA1;1//AT5G25590//WYR//ATSWC6//AGL25//AGL19//SNI1//RGL2//SPL11
GO:0048449	floral organ formation	BP	0.0363199071880277	AT5G25590//WYR//SNI1//AT1G63100
GO:0051171	regulation of nitrogen compound metaboli...	BP	0.0367371212743361	AT4G16610//CYCA1;1//bHLH115//AT5G25590//ARR6//AT5G60140//WYR//AT5G46010//AGL25//AGL21//RKD5//AGL19//SNI1//AtRLP46//AT1G12630//AT3G23870//AT1G63100//AFP1//At-FANCM//AGL66//AT1G60240//SPL11//RLK
GO:0048831	regulation of shoot system development	BP	0.0384413619649254	CYCA1;1//AT5G25590//WYR//ATSWC6//AGL25//SNI1
GO:0006305	DNA alkylation	BP	0.0394555624947686	CYCA1;1//AT5G25590//WYR//SNI1
GO:0006306	DNA methylation	BP	0.0394555624947686	CYCA1;1//AT5G25590//WYR//SNI1
GO:0048580	regulation of post-embryonic development	BP	0.0398157803842287	CYCA1;1//AT5G25590//WYR//ATSWC6//AGL25//SNI1//RGL2
GO:0042546	cell wall biogenesis	BP	0.0398842798584278	ATPRR1//ATCESA7//AT5G60720//PER64//AGL21//ATFUT6
GO:0006351	transcription, DNA-templated	BP	0.0402252401633886	AT4G16610//bHLH115//NFD3//AT5G25590//ARR6//AT5G60140//WYR//AT5G46010//AGL25//AGL21//RKD5//AGL19//SNI1//AtRLP46//AT1G12630//AT3G18880//AT3G23870//AT1G63100//AFP1//AGL66//AT1G60240//SPL11//RLK
GO:0032774	RNA biosynthetic process	BP	0.0402252401633886	AT4G16610//bHLH115//NFD3//AT5G25590//ARR6//AT5G60140//WYR//AT5G46010//AGL25//AGL21//RKD5//AGL19//SNI1//AtRLP46//AT1G12630//AT3G18880//AT3G23870//AT1G63100//AFP1//AGL66//AT1G60240//SPL11//RLK
GO:0097659	nucleic acid-templated transcription	BP	0.0402252401633886	AT4G16610//bHLH115//NFD3//AT5G25590//ARR6//AT5G60140//WYR//AT5G46010//AGL25//AGL21//RKD5//AGL19//SNI1//AtRLP46//AT1G12630//AT3G18880//AT3G23870//AT1G63100//AFP1//AGL66//AT1G60240//SPL11//RLK
GO:0042538	hyperosmotic salinity response	BP	0.040534157466611	AtRGL3//AtCLO3//RGL2//AFP1
GO:0044728	DNA methylation or demethylation	BP	0.0416294502019389	CYCA1;1//AT5G25590//WYR//SNI1
GO:0051239	regulation of multicellular organismal p...	BP	0.0420754210982164	CYCA1;1//AT5G25590//WYR//ATSWC6//AGL25//AGL19//SNI1//RGL2//SPL11
GO:0006304	DNA modification	BP	0.0427414414105828	CYCA1;1//AT5G25590//WYR//SNI1
GO:0051567	histone H3-K9 methylation	BP	0.0473562912889858	CYCA1;1//AT5G25590//WYR//SNI1
GO:0061647	histone H3-K9 modification	BP	0.0473562912889858	CYCA1;1//AT5G25590//WYR//SNI1
GO:0009312	oligosaccharide biosynthetic process	BP	0.0498902943937517	AtRGL3//RGL2
GO:0010468	regulation of gene expression	BP	0.0508453411419152	AT4G16610//CYCA1;1//bHLH115//EMB2782//AT5G25590//ARR6//AT5G60140//WYR//AT5G46010//AGL25//AGL21//RKD5//AGL19//SNI1//AtRLP46//AT1G12630//AT3G23870//AT1G63100//AFP1//AGL66//AT1G60240//SPL11//RLK
GO:0010383	cell wall polysaccharide metabolic proce...	BP	0.0512648362438	ATPRR1//ATCESA7//AT5G60720//PER64//AGL21
GO:0044036	cell wall macromolecule metabolic proces...	BP	0.0518040427125572	ATPRR1//ATCESA7//AT5G60720//PER64//AGL21//AtGH9B13
GO:0006355	regulation of transcription, DNA-templat...	BP	0.0520279390328781	AT4G16610//bHLH115//AT5G25590//ARR6//AT5G60140//WYR//AT5G46010//AGL25//AGL21//RKD5//AGL19//SNI1//AtRLP46//AT1G12630//AT3G23870//AT1G63100//AFP1//AGL66//AT1G60240//SPL11//RLK
GO:1903506	regulation of nucleic acid-templated tra...	BP	0.0520279390328781	AT4G16610//bHLH115//AT5G25590//ARR6//AT5G60140//WYR//AT5G46010//AGL25//AGL21//RKD5//AGL19//SNI1//AtRLP46//AT1G12630//AT3G23870//AT1G63100//AFP1//AGL66//AT1G60240//SPL11//RLK
GO:2001141	regulation of RNA biosynthetic process	BP	0.0520279390328781	AT4G16610//bHLH115//AT5G25590//ARR6//AT5G60140//WYR//AT5G46010//AGL25//AGL21//RKD5//AGL19//SNI1//AtRLP46//AT1G12630//AT3G23870//AT1G63100//AFP1//AGL66//AT1G60240//SPL11//RLK
GO:0010556	regulation of macromolecule biosynthetic...	BP	0.0537537971276271	AT4G16610//CYCA1;1//bHLH115//AT5G25590//ARR6//AT5G60140//WYR//AT5G46010//AGL25//AGL21//RKD5//AGL19//SNI1//AtRLP46//AT1G12630//AT3G23870//AT1G63100//AFP1//AGL66//AT1G60240//SPL11//RLK
GO:2000112	regulation of cellular macromolecule bio...	BP	0.0537537971276271	AT4G16610//CYCA1;1//bHLH115//AT5G25590//ARR6//AT5G60140//WYR//AT5G46010//AGL25//AGL21//RKD5//AGL19//SNI1//AtRLP46//AT1G12630//AT3G23870//AT1G63100//AFP1//AGL66//AT1G60240//SPL11//RLK
GO:0048856	anatomical structure development	BP	0.0554084503752536	DAR2//AHL22//CYCA1;1//RAP2.11//ATGER3//ATCESA7//AtRGL3//AT5G25590//AT5G60720//AT5G60140//WYR//AT5G46770//ATSWC6//AGL25//AT3G48940//AGL21//ATSUFE//AGL19//ENDO3//SNI1//AT4G10440//AtGH9B13//ATNCED5//ATECP31//RBL//RGL2//AT1G63100//AT1G12180//AGL66//AT1G50270//AT2G40440//SPL11
GO:0009686	gibberellin biosynthetic process	BP	0.0556209331775439	AtRGL3//RGL2
GO:0051252	regulation of RNA metabolic process	BP	0.056029197582826	AT4G16610//bHLH115//AT5G25590//ARR6//AT5G60140//WYR//AT5G46010//AGL25//AGL21//RKD5//AGL19//SNI1//AtRLP46//AT1G12630//AT3G23870//AT1G63100//AFP1//AGL66//AT1G60240//SPL11//RLK
GO:0016102	diterpenoid biosynthetic process	BP	0.0585689349092787	AtRGL3//RGL2
GO:0009685	gibberellin metabolic process	BP	0.061569953876035	AtRGL3//RGL2
GO:0031326	regulation of cellular biosynthetic proc...	BP	0.0639002460734032	AT4G16610//CYCA1;1//bHLH115//AT5G25590//ARR6//AT5G60140//WYR//AT5G46010//AGL25//AGL21//RKD5//AGL19//SNI1//AtRLP46//AT1G12630//AT3G23870//AT1G63100//AFP1//AGL66//AT1G60240//SPL11//RLK
GO:0051726	regulation of cell cycle	BP	0.0641384751906306	CYCA1;1//WYR//SNI1//AT1G07270//At-FANCM
GO:0016101	diterpenoid metabolic process	BP	0.0646224468800661	AtRGL3//RGL2
GO:0016114	terpenoid biosynthetic process	BP	0.065594685269643	AtRGL3//ATNCED5//ATECP31//RGL2
GO:0007275	multicellular organismal development	BP	0.0659670886312572	DAR2//AHL22//CYCA1;1//RAP2.11//ATGER3//ATCESA7//AtRGL3//AT5G25590//AT5G60140//GAMT2//WYR//ATSWC6//AGL25//AT3G48940//AGL21//ATSUFE//AGL19//ENDO3//SNI1//AT4G10440//ATNCED5//ATECP31//RBL//RGL2//AT1G63100//AT1G12180//AGL66//AT1G50270//AT2G40440//SPL11
GO:0051052	regulation of DNA metabolic process	BP	0.0670199506254183	CYCA1;1//WYR//SNI1//At-FANCM
GO:0060255	regulation of macromolecule metabolic pr...	BP	0.0685514998330198	AT4G16610//CYCA1;1//bHLH115//EMB2782//AT5G25590//ARR6//AT5G60140//WYR//AT5G46010//AGL25//AGL21//RKD5//AGL19//SNI1//AtRLP46//AT1G12630//AT3G23870//AT1G63100//AFP1//At-FANCM//AGL66//AT1G60240//SPL11//RLK
GO:0034654	nucleobase-containing compound biosynthe...	BP	0.0697573988883936	AT4G16610//bHLH115//NFD3//AT5G25590//ARR6//AT5G60140//WYR//AT5G46010//ATP5//AGL25//AGL21//RKD5//AGL19//SNI1//AtRLP46//AT1G12630//AT3G18880//AT3G23870//AT1G63100//AFP1//AGL66//AT1G60240//SPL11//RLK
GO:0000724	double-strand break repair via homologou...	BP	0.0708758194375706	SNI1//At-FANCM
GO:0000725	recombinational repair	BP	0.0708758194375706	SNI1//At-FANCM
GO:0048645	organ formation	BP	0.072881153160838	AT5G25590//WYR//SNI1//AT1G63100
GO:0008299	isoprenoid biosynthetic process	BP	0.0748846488918721	AtRGL3//ATNCED5//ATECP31//RGL2//Z-ISO
GO:0018193	peptidyl-amino acid modification	BP	0.0760657689615561	CYCA1;1//ATGER3//ATCESA7//AT5G25590//WYR//SNI1
GO:0044707	single-multicellular organism process	BP	0.0765282125612223	DAR2//AHL22//CYCA1;1//RAP2.11//ATGER3//ATCESA7//AtRGL3//AT5G25590//AT5G60140//GAMT2//WYR//ATSWC6//AGL25//AT3G48940//AGL21//ATSUFE//AGL19//ENDO3//SNI1//AT4G10440//ATNCED5//ATECP31//RBL//RGL2//AT1G63100//AT1G12180//AGL66//AT1G50270//AT2G40440//SPL11
GO:0009867	jasmonic acid mediated signaling pathway	BP	0.0799575011706825	AtRGL3//AtRLP46//RGL2//AFP1//RLK
GO:0071395	cellular response to jasmonic acid stimu...	BP	0.0799575011706825	AtRGL3//AtRLP46//RGL2//AFP1//RLK