GOID TERM ONTOLOGY pValue Genes GO:0006333 chromatin assembly or disassembly BP 2.65734518148934e-06 AT1G67690//PMR5//HMG//AT3G52170//AT3G13350//AT3G09480//ATSMO1//AT2G28720//AT2G37470 GO:0007623 circadian rhythm BP 0.000113396248634185 AT4G16146//AT5G14550//OEP6//AMY3//GWD//ADS2//AT2G21130//AtRIBA2 GO:0048511 rhythmic process BP 0.000113396248634185 AT4G16146//AT5G14550//OEP6//AMY3//GWD//ADS2//AT2G21130//AtRIBA2 GO:0005983 starch catabolic process BP 0.000897871083680105 DPE1//AMY3//GWD GO:0009251 glucan catabolic process BP 0.00112998828115593 DPE1//AMY3//GWD GO:0044247 cellular polysaccharide catabolic proces... BP 0.00112998828115593 DPE1//AMY3//GWD GO:0006325 chromatin organization BP 0.00165638803016136 AT1G67690//AT1G26190//PMR5//HMG//AT3G52170//AT3G13160//AT3G13350//AT3G09730//AT3G09480//ATSMO1//AT2G28720//AT2G37470 GO:0006863 purine nucleobase transport BP 0.00285725618094957 ATPUP1//ATGPT1//AT5G38370//AT2G29370 GO:0015851 nucleobase transport BP 0.00285725618094957 ATPUP1//ATGPT1//AT5G38370//AT2G29370 GO:0009624 response to nematode BP 0.00313752041077332 AT5G14940//ACA8//ATGPT1//ATCAT6 GO:0006323 DNA packaging BP 0.00482276020683868 AT1G67690//AT3G09480//AT2G28720//AT2G37470 GO:0031497 chromatin assembly BP 0.00482276020683868 AT1G67690//AT3G09480//AT2G28720//AT2G37470 GO:0044275 cellular carbohydrate catabolic process BP 0.00631391909265765 DPE1//AMY3//GWD GO:0005982 starch metabolic process BP 0.00730308643409821 DPE1//ATFRO8//OEP6//AMY3//AT1G07280//APL2//GWD GO:0009685 gibberellin metabolic process BP 0.00959459021965137 ATGA2OX4//ATMYB90//ATGA2OX1 GO:0031425 chloroplast RNA processing BP 0.00966454469929468 OTP84//EMB3102 GO:0045787 positive regulation of cell cycle BP 0.00966454469929468 AT1G67690//ATMMS21 GO:0016101 diterpenoid metabolic process BP 0.010543007851328 ATGA2OX4//ATMYB90//ATGA2OX1 GO:0016125 sterol metabolic process BP 0.0125028544844712 ATFRO8//ATB5-B//ATSMO1//TT15 GO:0000272 polysaccharide catabolic process BP 0.0137049133489033 DPE1//AMY3//GWD GO:0071103 DNA conformation change BP 0.0140052309624107 AT1G67690//AT3G09480//AT2G28720//AT2G37470 GO:0051276 chromosome organization BP 0.0140713005522643 AT1G67690//AT1G26190//PMR5//HMG//AT3G52170//AT3G13160//AT3G13350//AT3G09730//AT3G09480//ATSMO1//AT2G28720//AT2G37470 GO:0009631 cold acclimation BP 0.0214516638186296 GWD//COR15 GO:0043207 response to external biotic stimulus BP 0.0227742963136638 AT5G14940//PMR5//ACA8//ATGPT1//ATB5-B//ATCAT6//AT1G74640//ATLFNR2//AT1G75800//GWD//LSM8//ADS2//COR15//ZIP5//AT1G24240 GO:0051707 response to other organism BP 0.0227742963136638 AT5G14940//PMR5//ACA8//ATGPT1//ATB5-B//ATCAT6//AT1G74640//ATLFNR2//AT1G75800//GWD//LSM8//ADS2//COR15//ZIP5//AT1G24240 GO:0009607 response to biotic stimulus BP 0.0231015655108055 AT5G14940//PMR5//ACA8//ATGPT1//ATB5-B//ATCAT6//AT1G74640//ATLFNR2//AT1G75800//GWD//LSM8//ADS2//COR15//ZIP5//AT1G24240 GO:0016104 triterpenoid biosynthetic process BP 0.0242733462205373 ATFRO8//ATB5-B GO:0019742 pentacyclic triterpenoid metabolic proce... BP 0.0242733462205373 ATFRO8//ATB5-B GO:0019745 pentacyclic triterpenoid biosynthetic pr... BP 0.0242733462205373 ATFRO8//ATB5-B GO:0006334 nucleosome assembly BP 0.0261114639734022 AT3G09480//AT2G28720//AT2G37470 GO:0034728 nucleosome organization BP 0.0261114639734022 AT3G09480//AT2G28720//AT2G37470 GO:0065004 protein-DNA complex assembly BP 0.0294692203923118 AT3G09480//AT2G28720//AT2G37470 GO:0071824 protein-DNA complex subunit organization BP 0.0294692203923118 AT3G09480//AT2G28720//AT2G37470 GO:0006722 triterpenoid metabolic process BP 0.0303395784594156 ATFRO8//ATB5-B GO:0008202 steroid metabolic process BP 0.0354030737723452 ATFRO8//ATB5-B//ATSMO1//TT15 GO:0019252 starch biosynthetic process BP 0.047807888779714 ATFRO8//OEP6//AT1G07280//APL2//GWD GO:0009813 flavonoid biosynthetic process BP 0.0490213261294503 AtRbcX1//TT15//AT1G61740//AT2G47890 GO:0016126 sterol biosynthetic process BP 0.0517644738465496 ATFRO8//ATB5-B//ATSMO1 GO:0006721 terpenoid metabolic process BP 0.0532400293330921 ATFRO8//ATB5-B//ATGA2OX4//ATMYB90//ATGA2OX1 GO:0006073 cellular glucan metabolic process BP 0.0540819100202082 DPE1//ATFRO8//OEP6//AMY3//AT1G07280//APL2//GWD GO:0044042 glucan metabolic process BP 0.0540819100202082 DPE1//ATFRO8//OEP6//AMY3//AT1G07280//APL2//GWD GO:0043067 regulation of programmed cell death BP 0.0560858886309177 AT5G47130//AT1G74640//ATLFNR2//COR15//AT1G61740 GO:0010941 regulation of cell death BP 0.0575412790247979 AT5G47130//AT1G74640//ATLFNR2//COR15//AT1G61740 GO:0071407 cellular response to organic cyclic comp... BP 0.0658615755191199 HERK1//RDM1//AT1G74640//ATLFNR2//COR15//AT1G24240 GO:0009812 flavonoid metabolic process BP 0.0690648611010967 AtRbcX1//TT15//AT1G61740//AT2G47890 GO:0034220 ion transmembrane transport BP 0.073102187648472 COPT1//ACA8//ATCAT6//ZIP5 GO:0009963 positive regulation of flavonoid biosynt... BP 0.0766454421592181 AT1G61740//AT2G47890 GO:0010150 leaf senescence BP 0.0766454421592181 COR78//COR15 GO:0009767 photosynthetic electron transport chain BP 0.0811352039821213 PPH1//ATLFNR2 GO:0000023 maltose metabolic process BP 0.0859161367189103 DPE1//ATFRO8//OEP6//AT1G07280 GO:0032870 cellular response to hormone stimulus BP 0.0861954418659458 HERK1//ATMMS21//ATMTK//ATMYB90//AT1G74640//ATLFNR2//COR15 GO:0044264 cellular polysaccharide metabolic proces... BP 0.0867813289055514 DPE1//ATFRO8//OEP6//AT3G56230//AMY3//AT1G07280//APL2//GWD GO:0006857 oligopeptide transport BP 0.0888539988050608 AT5G14940//AT1G22570//ZIP5 GO:0010310 regulation of hydrogen peroxide metaboli... BP 0.0888539988050608 AT1G74640//ATLFNR2//COR15 GO:0015833 peptide transport BP 0.0888539988050608 AT5G14940//AT1G22570//ZIP5 GO:0006767 water-soluble vitamin metabolic process BP 0.0903494953106742 ATPDX2//AtRIBA2 GO:0042364 water-soluble vitamin biosynthetic proce... BP 0.0903494953106742 ATPDX2//AtRIBA2 GO:0071495 cellular response to endogenous stimulus BP 0.0904807344246197 HERK1//ATMMS21//ATMTK//ATMYB90//AT1G74640//ATLFNR2//COR15 GO:0009414 response to water deprivation BP 0.0911465505533309 COR78//DREB2//AtRbcX1//COR15//AT2G21130 GO:0042886 amide transport BP 0.0918402890449082 AT5G14940//AT1G22570//ZIP5 GO:0044711 single-organism biosynthetic process BP 0.0927088487196225 AT2G40935//ATPDX2//ACA8//PDC2//ATFRO8//ATB5-B//OEP6//GATL7//AT3G56230//MTO2//PSD3//AtRbcX1//ATMMS21//AT3G13160//AHB2//ATMTK//TRZ3//ATMYB90//ATCDS1//AT1G07280//ATSMO1//ATLFNR2//AT1G50000//APL2//HYP7//GWD//ADS2//AtRIBA2//AT2G47890//AT2G35390 GO:0012501 programmed cell death BP 0.0930472955544272 AT5G47130//AT1G74640//ATLFNR2//COR15//AT1G61740 GO:0006694 steroid biosynthetic process BP 0.0948679992021458 ATFRO8//ATB5-B//ATSMO1 GO:0009415 response to water BP 0.0969098668484903 COR78//DREB2//AtRbcX1//COR15//AT2G21130 GO:0071702 organic substance transport BP 0.097845379711364 AT4G15610//ATPUP1//AT5G14940//ATGPT1//AT5G38370//ATCAT6//ADF2//AT3G52170//AT1G74640//ATLFNR2//AT1G22570//AtRH36//LSM8//COR15//AT1G61740//ZIP5//AT2G29370//AGL20 GO:0006457 protein folding BP 0.102149481826607 AT5G23240//DREB2//AtRbcX1//AT2G21130 GO:0051704 multi-organism process BP 0.104524981016619 AT5G14940//COPT1//PMR5//ACA8//ATGPT1//ATB5-B//ATCAT6//MEE18//AT1G74640//ATLFNR2//ATCNGC7//AT1G75800//GWD//LSM8//ADS2//COR15//ZIP5//AT1G24240 GO:0009110 vitamin biosynthetic process BP 0.104707487962868 ATPDX2//AtRIBA2 GO:0009409 response to cold BP 0.10720558524173 COR78//AtRbcX1//ATLFNR2//GWD//COR15//AT2G21130//AGL20 GO:1901699 cellular response to nitrogen compound BP 0.107378897598177 RDM1//ATMTK//AT1G24240 GO:0043933 macromolecular complex subunit organizat... BP 0.10955608994522 AT1G67690//AT1G26190//PMR5//HMG//AT3G52170//AT3G13160//AT3G13350//AT3G09730//AT3G09480//ATSMO1//ATLFNR2//AT2G28720//AT2G42310//AT2G37470 GO:0098655 cation transmembrane transport BP 0.110603044624022 COPT1//ACA8//ZIP5 GO:0098662 inorganic cation transmembrane transport BP 0.110603044624022 COPT1//ACA8//ZIP5 GO:0010363 regulation of plant-type hypersensitive ... BP 0.117104402517242 AT1G74640//ATLFNR2//COR15//AT1G61740 GO:0098660 inorganic ion transmembrane transport BP 0.117161941827384 COPT1//ACA8//ZIP5 GO:2000377 regulation of reactive oxygen species me... BP 0.117161941827384 AT1G74640//ATLFNR2//COR15 GO:0009719 response to endogenous stimulus BP 0.119860764452674 COR78//DREB2//HERK1//AT4G34750//ATMMS21//AHB2//ATMTK//ATMYB90//AT1G74640//ATLFNR2//COR15//AT2G21130//AGL20 GO:0006612 protein targeting to membrane BP 0.122291957211295 AT1G74640//ATLFNR2//COR15//AT1G61740 GO:0006470 protein dephosphorylation BP 0.123863386441053 PPH1//AT1G74640//COR15 GO:0009156 ribonucleoside monophosphate biosyntheti... BP 0.124720634863696 ACA8//AT2G35390 GO:0009962 regulation of flavonoid biosynthetic pro... BP 0.124720634863696 AT1G61740//AT2G47890 GO:0009725 response to hormone BP 0.126288709449076 COR78//HERK1//AT4G34750//ATMMS21//AHB2//ATMTK//ATMYB90//AT1G74640//ATLFNR2//COR15//AT2G21130//AGL20 GO:0071705 nitrogen compound transport BP 0.129868901235141 AT4G15610//ATPUP1//AT5G14940//ATGPT1//AT5G38370//ATCAT6//AT1G22570//ZIP5//AT2G29370 GO:0080135 regulation of cellular response to stres... BP 0.130255126827269 AT1G74640//ATLFNR2//COR15//AT1G61740 GO:0008219 cell death BP 0.130631955460676 AT5G47130//AT1G74640//ATLFNR2//COR15//AT1G61740 GO:0016265 death BP 0.130631955460676 AT5G47130//AT1G74640//ATLFNR2//COR15//AT1G61740 GO:0000165 MAPK cascade BP 0.13070142855422 AT1G74640//ATLFNR2//COR15 GO:0009862 systemic acquired resistance, salicylic ... BP 0.13070142855422 AT1G74640//ATLFNR2//COR15 GO:0005976 polysaccharide metabolic process BP 0.133446675160045 DPE1//ATFRO8//OEP6//AT3G56230//AMY3//AT1G07280//APL2//GWD GO:0023014 signal transduction by phosphorylation BP 0.134169804824947 AT1G74640//ATLFNR2//COR15 GO:0006396 RNA processing BP 0.134290929716482 OTP84//RDM1//TRZ3//EMB3102//HYP7//CYCT1;3//AT1G24240 GO:0009124 nucleoside monophosphate biosynthetic pr... BP 0.135046811325567 ACA8//AT2G35390 GO:0009250 glucan biosynthetic process BP 0.135183268278546 ATFRO8//OEP6//AT1G07280//APL2//GWD GO:0009626 plant-type hypersensitive response BP 0.141199129970632 AT1G74640//ATLFNR2//COR15//AT1G61740 GO:0006338 chromatin remodeling BP 0.143052750403557 190_ GO:0015718 monocarboxylic acid transport BP 0.143052750403557 144_ GO:0046352 disaccharide catabolic process BP 0.143052750403557 216_ GO:0071248 cellular response to metal ion BP 0.143052750403557 819_ GO:0034050 host programmed cell death induced by sy... BP 0.143991304020825 AT1G74640//ATLFNR2//COR15//AT1G61740 GO:0072657 protein localization to membrane BP 0.146805297034398 AT1G74640//ATLFNR2//COR15//AT1G61740