GOID TERM ONTOLOGY pValue Genes GO:0006520 cellular amino acid metabolic process BP 0.00170966640514845 ATBCAT-5//OVA6//ATUK/UPRT1//AT5G22340//AT3G61540//ATSOT17//AT3G19400//AT2G47320//ATGGH1//CYP79B3//ATSRS//AT2G24290//AT2G30695 GO:0000096 sulfur amino acid metabolic process BP 0.00329064231239282 ATUK/UPRT1//AT3G61540//ATSOT17//AT3G19400//AT2G47320//CYP79B3//ATSRS//AT2G24290 GO:0046132 pyrimidine ribonucleoside biosynthetic p... BP 0.00363071186183912 ATNDPK2//ATUK/UPRT1 GO:0046134 pyrimidine nucleoside biosynthetic proce... BP 0.00363071186183912 ATNDPK2//ATUK/UPRT1 GO:0008652 cellular amino acid biosynthetic process BP 0.00367589668804636 ATUK/UPRT1//AT5G22340//AT3G61540//ATSOT17//AT3G19400//AT2G47320//CYP79B3//ATSRS//AT2G24290//AT2G30695 GO:0051258 protein polymerization BP 0.00403308195259314 CPI1//AT5G50180//AGD3//AtCPA//AT2G04280 GO:0019752 carboxylic acid metabolic process BP 0.00409346142736225 AT5G20080//ATBCAT-5//ATNDPK2//OVA6//ATUK/UPRT1//AT5G22340//AT5G10540//AtFBA4//AT3G61540//AT3G57700//SNRK2-2//ATSOT17//AT3G19400//AT2G47320//AtkdsA1//ATGGH1//PFK5//CYP79B3//ATSRS//AT2G24290//AT2G23680//AT2G30695 GO:0046939 nucleotide phosphorylation BP 0.0052613724561211 ATNDPK2//AT3G60180 GO:0043244 regulation of protein complex disassembl... BP 0.00618073844973524 AtCPA//ATELF5A-1 GO:0046131 pyrimidine ribonucleoside metabolic proc... BP 0.00618073844973524 ATNDPK2//ATUK/UPRT1 GO:0016226 iron-sulfur cluster assembly BP 0.00663095761665326 OVA6//AT5G22340//ATSRS//AT2G30695 GO:0031163 metallo-sulfur cluster assembly BP 0.00663095761665326 OVA6//AT5G22340//ATSRS//AT2G30695 GO:0043436 oxoacid metabolic process BP 0.00666773669445063 AT5G20080//ATBCAT-5//ATNDPK2//OVA6//ATUK/UPRT1//AT5G22340//AT5G10540//AtFBA4//AT3G61540//AT3G57700//SNRK2-2//ATSOT17//AT3G19400//AT2G47320//AtkdsA1//ATGGH1//PFK5//CYP79B3//ATSRS//AT2G24290//AT2G23680//AT2G30695 GO:0006082 organic acid metabolic process BP 0.00672480454846138 AT5G20080//ATBCAT-5//ATNDPK2//OVA6//ATUK/UPRT1//AT5G22340//AT5G10540//AtFBA4//AT3G61540//AT3G57700//SNRK2-2//ATSOT17//AT3G19400//AT2G47320//AtkdsA1//ATGGH1//PFK5//CYP79B3//ATSRS//AT2G24290//AT2G23680//AT2G30695 GO:0000097 sulfur amino acid biosynthetic process BP 0.00685362022587355 ATUK/UPRT1//AT3G61540//ATSOT17//AT3G19400//AT2G47320//CYP79B3//AT2G24290 GO:0032270 positive regulation of cellular protein ... BP 0.00716769690760313 ATPDK1//ATELF5A-1 GO:1901137 carbohydrate derivative biosynthetic pro... BP 0.00748814672377778 DGL1//ATNDPK2//ATUK/UPRT1//ATSOT17//ATACP5//AT1G12990//AtkdsA1//AT2G37020//CYP79B3//AT1G61790//AT2G01720 GO:0007020 microtubule nucleation BP 0.00821179196288643 CPI1//AT5G50180//AT2G04280 GO:0006213 pyrimidine nucleoside metabolic process BP 0.0082209469236974 ATNDPK2//ATUK/UPRT1 GO:0046785 microtubule polymerization BP 0.00872672971461987 CPI1//AT5G50180//AT2G04280 GO:0044283 small molecule biosynthetic process BP 0.00896144986226393 CPI1//ATUK/UPRT1//AT5G22340//AT3G61540//AT3G57700//ATSOT17//AT3G19400//AT2G47320//HYD1//AtkdsA1//CYP79B3//ATSRS//ERG28//AT2G24290//AT2G23680//AT2G30695 GO:1901564 organonitrogen compound metabolic proces... BP 0.00904794055223868 ATBCAT-5//ATNDPK2//OVA6//ATUK/UPRT1//AT5G22340//AtFBA4//AT3G61540//AT3G60180//AT3G43670//ATSOT17//PUT5//AT3G19400//AT2G47320//ATGGH1//AT2G37020//CYP79B3//ATSRS//AT2G24290//AT2G30695 GO:0051247 positive regulation of protein metabolic... BP 0.00933920540912082 ATPDK1//ATELF5A-1 GO:0007010 cytoskeleton organization BP 0.00999485841427727 CPI1//AT5G50180//ATUK/UPRT1//AGD3//AtCPA//AT2G04280//PFK5 GO:0031109 microtubule polymerization or depolymeri... BP 0.0103834915987824 CPI1//AT5G50180//AT2G04280 GO:0006399 tRNA metabolic process BP 0.0107043370931305 OVA6//RH39//ATSRS//AT2G30695 GO:0006790 sulfur compound metabolic process BP 0.0109558271777784 CPI1//ATUK/UPRT1//AT3G61540//ATSOT17//AT3G19400//AT2G47320//HYD1//CYP79B3//ATSRS//AT2G24290 GO:0044281 small molecule metabolic process BP 0.0122136039560519 AT5G20080//ATBCAT-5//ATNDPK2//OVA6//CPI1//ATUK/UPRT1//AT5G22340//AT5G10540//AtFBA4//AT3G61540//AT3G60180//AT3G57700//SNRK2-2//ATSOT17//AT3G19400//AT2G47320//HYD1//AtkdsA1//ATGGH1//AT2G37020//PFK5//CYP79B3//ATSRS//ERG28//AT2G24290//AT2G23680//AT2G30695 GO:0009069 serine family amino acid metabolic proce... BP 0.0125033375625568 AT3G61540//ATSOT17//AT3G19400//AT2G47320//CYP79B3//ATSRS GO:0006897 endocytosis BP 0.0130714636070806 CPI1//AGD3 GO:0010089 xylem development BP 0.0130714636070806 AGD3//ATELF5A-1 GO:0043624 cellular protein complex disassembly BP 0.0130714636070806 AtCPA//ATELF5A-1 GO:0032984 macromolecular complex disassembly BP 0.0158619374076405 AtCPA//ATELF5A-1 GO:0043241 protein complex disassembly BP 0.0158619374076405 AtCPA//ATELF5A-1 GO:0019344 cysteine biosynthetic process BP 0.01701722761904 AT3G61540//ATSOT17//AT3G19400//AT2G47320//CYP79B3 GO:0006534 cysteine metabolic process BP 0.0178513992317664 AT3G61540//ATSOT17//AT3G19400//AT2G47320//CYP79B3 GO:0016126 sterol biosynthetic process BP 0.0193811857174976 CPI1//AT2G47320//HYD1//ERG28 GO:0016053 organic acid biosynthetic process BP 0.0198006763223108 ATUK/UPRT1//AT5G22340//AT3G61540//AT3G57700//ATSOT17//AT3G19400//AT2G47320//AtkdsA1//CYP79B3//ATSRS//AT2G24290//AT2G23680//AT2G30695 GO:0046394 carboxylic acid biosynthetic process BP 0.0198006763223108 ATUK/UPRT1//AT5G22340//AT3G61540//AT3G57700//ATSOT17//AT3G19400//AT2G47320//AtkdsA1//CYP79B3//ATSRS//AT2G24290//AT2G23680//AT2G30695 GO:1901135 carbohydrate derivative metabolic proces... BP 0.0200360659190423 DGL1//ATNDPK2//ATUK/UPRT1//AtFBA4//AT3G60180//ATSOT17//ATACP5//AT1G12990//AtkdsA1//AT2G37020//CYP79B3//AT1G61790//AT2G01720//AT2G30695 GO:0009070 serine family amino acid biosynthetic pr... BP 0.0209835207124275 AT3G61540//ATSOT17//AT3G19400//AT2G47320//CYP79B3 GO:0016125 sterol metabolic process BP 0.0217624713642576 CPI1//AT2G47320//HYD1//ERG28 GO:0009218 pyrimidine ribonucleotide metabolic proc... BP 0.0236612524643717 ATNDPK2//ATUK/UPRT1//AT3G60180//AT2G37020 GO:0042446 hormone biosynthetic process BP 0.0239386330240679 CPI1//ATSOT17//AT2G47320//HYD1//CYP79B3 GO:1901605 alpha-amino acid metabolic process BP 0.0244496851775318 ATUK/UPRT1//AT3G61540//ATSOT17//AT3G19400//AT2G47320//ATGGH1//CYP79B3//ATSRS//AT2G24290 GO:0006084 acetyl-CoA metabolic process BP 0.0249225501251875 CPI1//AT2G47320//HYD1 GO:0006637 acyl-CoA metabolic process BP 0.0258850904303477 CPI1//AT2G47320//HYD1 GO:0035383 thioester metabolic process BP 0.0258850904303477 CPI1//AT2G47320//HYD1 GO:0006487 protein N-linked glycosylation BP 0.0268674357015308 DGL1//AT1G12990//AT1G61790 GO:0022411 cellular component disassembly BP 0.0273853349047471 AtCPA//ATELF5A-1 GO:0006220 pyrimidine nucleotide metabolic process BP 0.0277536028355115 ATNDPK2//ATUK/UPRT1//AT3G60180//AT2G37020 GO:0010310 regulation of hydrogen peroxide metaboli... BP 0.0292060502987135 AtRLP54//AT3G57700//AtIDD2//AT2G23680 GO:0016129 phytosteroid biosynthetic process BP 0.0299330682225726 CPI1//AT2G47320//HYD1 GO:0016132 brassinosteroid biosynthetic process BP 0.0299330682225726 CPI1//AT2G47320//HYD1 GO:0032268 regulation of cellular protein metabolic... BP 0.0300295808256477 AtRLP54//ATPDK1//AtIDD2//ATELF5A-1//ATSRS GO:0016128 phytosteroid metabolic process BP 0.0309943755542027 CPI1//AT2G47320//HYD1 GO:0016131 brassinosteroid metabolic process BP 0.0309943755542027 CPI1//AT2G47320//HYD1 GO:0010087 phloem or xylem histogenesis BP 0.0311428119550589 AGD3//ATELF5A-1 GO:0051246 regulation of protein metabolic process BP 0.0350242481146685 AtRLP54//ATPDK1//AtIDD2//ATELF5A-1//ATSRS GO:0042445 hormone metabolic process BP 0.035682730494131 CPI1//ATSOT17//AT2G47320//HYD1//CYP79B3 GO:1901607 alpha-amino acid biosynthetic process BP 0.0362299911268844 ATUK/UPRT1//AT3G61540//ATSOT17//AT3G19400//AT2G47320//CYP79B3//AT2G24290 GO:0006694 steroid biosynthetic process BP 0.0379950011402502 CPI1//AT2G47320//HYD1//ERG28 GO:2000377 regulation of reactive oxygen species me... BP 0.0379950011402502 AtRLP54//AT3G57700//AtIDD2//AT2G23680 GO:0006486 protein glycosylation BP 0.0388616233934837 DGL1//AT1G12990//AT1G61790//AT2G01720 GO:0009101 glycoprotein biosynthetic process BP 0.0388616233934837 DGL1//AT1G12990//AT1G61790//AT2G01720 GO:0043413 macromolecule glycosylation BP 0.0388616233934837 DGL1//AT1G12990//AT1G61790//AT2G01720 GO:0006418 tRNA aminoacylation for protein translat... BP 0.0392227996780343 OVA6//ATSRS GO:0043038 amino acid activation BP 0.0392227996780343 OVA6//ATSRS GO:0043039 tRNA aminoacylation BP 0.0392227996780343 OVA6//ATSRS GO:0009100 glycoprotein metabolic process BP 0.0397395608974217 DGL1//AT1G12990//AT1G61790//AT2G01720 GO:0072527 pyrimidine-containing compound metabolic... BP 0.0397395608974217 ATNDPK2//ATUK/UPRT1//AT3G60180//AT2G37020 GO:0010817 regulation of hormone levels BP 0.0399905186202413 CPI1//AT5G01990//ATSOT17//AT2G47320//HYD1//CYP79B3 GO:0070085 glycosylation BP 0.0415293990284522 DGL1//AT1G12990//AT1G61790//AT2G01720 GO:0031399 regulation of protein modification proce... BP 0.0452449647398528 AtRLP54//ATPDK1//AtIDD2//ATSRS GO:0006470 protein dephosphorylation BP 0.0462021568051035 AtRLP54//AtIDD2//AT3G44620//ATSRS GO:0070271 protein complex biogenesis BP 0.0466395742867904 CPI1//AT5G50180//AGD3//AT3G53730//RH39//AtCPA//AT2G04280//ATSRS//AT2G30695 GO:0008202 steroid metabolic process BP 0.0481504670764109 CPI1//AT2G47320//HYD1//ERG28 GO:0019220 regulation of phosphate metabolic proces... BP 0.0481504670764109 AtRLP54//ATPDK1//AtIDD2//ATSRS GO:0051174 regulation of phosphorus metabolic proce... BP 0.0481504670764109 AtRLP54//ATPDK1//AtIDD2//ATSRS GO:0044710 single-organism metabolic process BP 0.0497494308538329 AT5G20080//DGL1//ATBCAT-5//ATNDPK2//AT5G58030//OVA6//CPI1//ATUK/UPRT1//AtRLP54//AT5G22340//AT5G10540//AtFBA4//AT3G61540//AT3G60180//AT3G57700//SNRK2-2//AtIDD2//AT3G43670//ATSOT17//PUT5//CYP705A21//AT3G19400//ATACP5//AT2G47320//HYD1//ATELF5A-1//AT1G12990//AtkdsA1//ATGGH1//AT2G37020//PFK5//CYP79B3//ATSRS//AT1G61790//GUX3//ERG28//AT1G24240//AT2G24290//AT2G01720//AT2G23680//AT2G30695 GO:0044085 cellular component biogenesis BP 0.0539092939983676 OVA6//CPI1//AT5G50180//AT5G22340//AGD3//AT3G53730//RH39//AtCPA//AtkdsA1//AT2G04280//ATSRS//GUX3//AT1G24240//AT2G30695 GO:0000165 MAPK cascade BP 0.0553247368553629 AtRLP54//AT3G57700//AtIDD2//AT2G23680 GO:0006090 pyruvate metabolic process BP 0.0556935020719245 AT5G20080//ATNDPK2//AtFBA4//SNRK2-2//PFK5//CYP79B3//AT2G30695 GO:0023014 signal transduction by phosphorylation BP 0.0563945526294512 AtRLP54//AT3G57700//AtIDD2//AT2G23680 GO:0044272 sulfur compound biosynthetic process BP 0.0576742940149817 ATUK/UPRT1//AT3G61540//ATSOT17//AT3G19400//AT2G47320//CYP79B3//AT2G24290 GO:0009627 systemic acquired resistance BP 0.0583870049397108 AtRLP54//AT3G57700//AtIDD2//CYP79B3//AT1G61790//AT2G23680 GO:0044763 single-organism cellular process BP 0.0616113655514487 AT5G20080//DGL1//ATBCAT-5//ATNDPK2//AT5G58030//VPS26A//OVA6//CPI1//AT5G50180//AT5G46520//ATUK/UPRT1//AtRLP54//AT5G36930//AT5G22340//AGD3//AT5G10540//AtFBA4//AT5G01990//AT3G61540//AT3G60180//AT3G57700//SNRK2-2//AtIDD2//ATSOT17//PUT5//ZTP29//AT3G19400//ATACP5//AT3G21650//AtCPA//AT2G47320//HYD1//ATELF5A-1//AT1G12990//AtkdsA1//ATGGH1//AT2G04280//AT2G37020//PFK5//CYP79B3//ATSRS//AT1G61790//GUX3//ERG28//AT1G24240//HBI1//AT2G24290//AT2G01720//AT2G23680//AT2G30695 GO:0071822 protein complex subunit organization BP 0.06488490569364 CPI1//AT5G50180//AGD3//AT3G53730//AtCPA//ATELF5A-1//AT2G04280//ATSRS//AT2G30695 GO:0022607 cellular component assembly BP 0.0650632963547913 OVA6//CPI1//AT5G50180//AT5G22340//AGD3//AT3G53730//AtCPA//AT2G04280//ATSRS//AT2G30695 GO:0016311 dephosphorylation BP 0.0653535880365307 AtRLP54//AtIDD2//AT3G44620//ATSRS GO:1901566 organonitrogen compound biosynthetic pro... BP 0.0690973589037004 ATNDPK2//ATUK/UPRT1//AT5G22340//AT3G61540//ATSOT17//AT3G19400//AT2G47320//AT2G37020//CYP79B3//ATSRS//AT2G24290//AT2G30695 GO:0009862 systemic acquired resistance, salicylic ... BP 0.0713105784106706 AtRLP54//AT3G57700//AtIDD2//AT2G23680 GO:0006732 coenzyme metabolic process BP 0.0713534843424255 CPI1//AtFBA4//AT2G47320//HYD1//ATGGH1//CYP79B3 GO:0035304 regulation of protein dephosphorylation BP 0.0716489205566101 AtRLP54//AtIDD2//ATSRS GO:0016192 vesicle-mediated transport BP 0.0720001586764942 DGL1//AT5G58030//VPS26A//CPI1//AGD3//ATVAMP713//AT2G03510 GO:0009072 aromatic amino acid family metabolic pro... BP 0.0725345555861278 AT5G22340//ATSOT17//CYP79B3//AT2G30695 GO:0009658 chloroplast organization BP 0.0725345555861278 OVA6//RH39//ATSRS//AT2G30695 GO:0009625 response to insect BP 0.0752758285375682 CYP79B3//AT2G23680 GO:0035303 regulation of dephosphorylation BP 0.0765979055529628 AtRLP54//AtIDD2//ATSRS GO:0046165 alcohol biosynthetic process BP 0.0827111356329256 CPI1//AT2G47320//HYD1//ERG28