GOID TERM ONTOLOGY pValue Genes GO:0006623 protein targeting to vacuole BP 0.00198514793254291 ATATG3//AT5G53310//ATSYP22//ADF2//AT4G30600 GO:0072665 protein localization to vacuole BP 0.00198514793254291 ATATG3//AT5G53310//ATSYP22//ADF2//AT4G30600 GO:0072666 establishment of protein localization to... BP 0.00198514793254291 ATATG3//AT5G53310//ATSYP22//ADF2//AT4G30600 GO:0007034 vacuolar transport BP 0.00300311355113475 ATATG3//AT5G53310//ATSYP22//ADF2//AT4G30600 GO:0009719 response to endogenous stimulus BP 0.00409197954209248 GSH2//ATKO1//AT5G53310//ATRAB1A//OBF5//CYP71B5//IAA11//AT4G22820//AFB1//iqd32//TGA3//ATGLR1.1//ABCB14//AJH2//AT1G17520//AT1G33050//AT1G13195//ATFH8//ATWRKY6//ERD7//AtRLP19 GO:0016049 cell growth BP 0.0042041751344221 ATATG3//ATRAB1A//ATSYP22//ATCLC-A//ADF2//AFB1//APC2//ATFH8 GO:0010033 response to organic substance BP 0.00617355665306398 GSH2//ATKO1//AT5G53310//ATRAB1A//OBF5//AtPP2-A13//CYP71B5//IAA11//AT4G22820//AFB1//iqd32//TGA3//AT3G22520//ATGLR1.1//ABCB14//VIP5//AJH2//AT1G17520//AT1G33050//AT1G13195//APC2//APG9//AT1G77280//ATFH8//ATWRKY6//ERD7//AtRLP19 GO:0006396 RNA processing BP 0.00920218351421476 AT5G55100//OBF5//iqd32//AT3G22520//VIP5//APC2//ATFH8//PAPS2 GO:1901698 response to nitrogen compound BP 0.00975344000034253 AT5G53310//ATRAB1A//ATCLC-A//CYP71B5//AT4G22820//TGA3//AT3G22520//VIP5//AT1G13195//APC2//ATFH8//ATWRKY6 GO:0048193 Golgi vesicle transport BP 0.0110564702819247 ATATG3//AT5G53310//ATSYP22//ADF2//AT4G30600//atgos11//VIP5 GO:1901699 cellular response to nitrogen compound BP 0.0129635998405833 CYP71B5//AT3G22520//VIP5//APC2 GO:0055080 cation homeostasis BP 0.0162590452954991 ATCLC-A//AT4G32190//AT3G19010//ATGLR1.1 GO:0000902 cell morphogenesis BP 0.0169556077642408 ATATG3//ATRAB1A//ATSYP22//ADF2//AFB1//APC2//ATFH8 GO:0072594 establishment of protein localization to... BP 0.0169556077642408 ATATG3//AT5G53220//AT5G53310//ATSYP22//ADF2//AT4G30600//atgos11 GO:0033365 protein localization to organelle BP 0.018617330474115 ATATG3//AT5G53220//AT5G53310//ATSYP22//ADF2//AT4G30600//atgos11 GO:0016192 vesicle-mediated transport BP 0.0190169992163613 ATATG3//ATSGP1//AT5G53310//ATSYP22//ADF2//AT4G30600//AT1G33970//atgos11//VIP5 GO:0040007 growth BP 0.020429777738135 ATATG3//ATRAB1A//ATSYP22//ATCLC-A//ADF2//AFB1//APC2//ATFH8 GO:0032989 cellular component morphogenesis BP 0.0208523052127211 ATATG3//ATRAB1A//ATSYP22//ADF2//AFB1//APC2//ATFH8 GO:0050801 ion homeostasis BP 0.0252371090344024 ATCLC-A//AT4G32190//AT3G19010//ATGLR1.1 GO:0016482 cytoplasmic transport BP 0.0272117986010328 ATATG3//AT5G53220//AT5G53310//ATSYP22//WIT1//ADF2//AT4G30600//atgos11 GO:0010039 response to iron ion BP 0.0286239541598452 CYP71B5//AT4G32190 GO:0035303 regulation of dephosphorylation BP 0.0293722189820392 TGA3//ATXRCC1//AtRLP19 GO:0042221 response to chemical BP 0.0299385325189667 GSH2//ATKO1//AT5G53310//ATRAB1A//ATCLC-A//OBF5//AtPP2-A13//CYP71B5//AT4G32190//AT4G29520//IAA11//AT4G22820//AFB1//iqd32//TGA3//AT3G22520//ATGLR1.1//ABCB14//VIP5//AJH2//AT1G17520//AT1G33050//AT1G13195//APC2//APG9//AT1G77280//ATFH8//ATWRKY6//ERD7//AtRLP19 GO:0006605 protein targeting BP 0.030380129605868 ATATG3//AT5G53220//AT5G53310//AT5G47180//ATSYP22//ADF2//AT4G30600//TGA3//AT3G19010//atgos11//AtRLP19 GO:0006886 intracellular protein transport BP 0.0306510264780675 ATATG3//AT5G53220//AT5G53310//AT5G47180//ATSYP22//ADF2//AT4G30600//GAMMA-SNAP//TGA3//AT3G19010//atgos11//AtRLP19 GO:1902580 single-organism cellular localization BP 0.0312280655872738 ATATG3//AT5G53220//AT5G53310//AT5G47180//ATSYP22//ADF2//AT4G30600//TGA3//AT3G19010//atgos11//AtRLP19 GO:0015031 protein transport BP 0.0320022294057672 ATATG3//AT5G53220//AT5G53310//ATRAB1A//AT5G47180//ATSYP22//ADF2//AT4G30600//GAMMA-SNAP//TGA3//AT3G19010//atgos11//AtRLP19 GO:0045184 establishment of protein localization BP 0.0320022294057672 ATATG3//AT5G53220//AT5G53310//ATRAB1A//AT5G47180//ATSYP22//ADF2//AT4G30600//GAMMA-SNAP//TGA3//AT3G19010//atgos11//AtRLP19 GO:0035196 production of miRNAs involved in gene si... BP 0.0323079624312848 AT3G22520//VIP5//APC2 GO:0034613 cellular protein localization BP 0.0335188886556804 ATATG3//AT5G53220//AT5G53310//AT5G47180//ATSYP22//ADF2//AT4G30600//GAMMA-SNAP//TGA3//AT3G19010//atgos11//AtRLP19 GO:0010048 vernalization response BP 0.0353917634569503 AT4G26620//iqd32//ABCB14 GO:0035195 gene silencing by miRNA BP 0.0353917634569503 AT3G22520//VIP5//APC2 GO:0009733 response to auxin BP 0.0355370633120851 OBF5//IAA11//AFB1//ABCB14//AJH2//AT1G17520 GO:0030422 production of siRNA involved in RNA inte... BP 0.0369888454061501 AT3G22520//VIP5//APC2 GO:0006810 transport BP 0.0370808564576959 ATATG3//ATSGP1//AT5G53220//AT5G53310//ATRAB1A//AT5G47180//ATSYP22//ATCLC-A//WIT1//ADF2//AT4G30600//GAMMA-SNAP//TGA3//AT1G33970//AT3G19010//ATGLR1.1//atgos11//AT1G35350//ABCB14//VIP5//AT2G16380//ATFH8//ATWRKY6//AtRLP19 GO:0046907 intracellular transport BP 0.0376124815758274 ATATG3//AT5G53220//AT5G53310//AT5G47180//ATSYP22//WIT1//ADF2//AT4G30600//GAMMA-SNAP//TGA3//AT3G19010//atgos11//VIP5//AtRLP19 GO:0030003 cellular cation homeostasis BP 0.0386225036300576 ATCLC-A//AT3G19010//ATGLR1.1 GO:0031050 dsRNA fragmentation BP 0.0402925618539669 AT3G22520//VIP5//APC2 GO:0043331 response to dsRNA BP 0.0402925618539669 AT3G22520//VIP5//APC2 GO:0070918 production of small RNA involved in gene... BP 0.0402925618539669 AT3G22520//VIP5//APC2 GO:0071359 cellular response to dsRNA BP 0.0402925618539669 AT3G22520//VIP5//APC2 GO:0070727 cellular macromolecule localization BP 0.040310204938884 ATATG3//AT5G53220//AT5G53310//AT5G47180//ATSYP22//ADF2//AT4G30600//GAMMA-SNAP//TGA3//AT3G19010//atgos11//AtRLP19 GO:0008104 protein localization BP 0.0404398009842334 ATATG3//AT5G53220//AT5G53310//ATRAB1A//AT5G47180//ATSYP22//ADF2//AT4G30600//GAMMA-SNAP//TGA3//AT3G19010//atgos11//AtRLP19 GO:0051234 establishment of localization BP 0.0413886703361197 ATATG3//ATSGP1//AT5G53220//AT5G53310//ATRAB1A//AT5G47180//ATSYP22//ATCLC-A//WIT1//ADF2//AT4G30600//GAMMA-SNAP//TGA3//AT1G33970//AT3G19010//ATGLR1.1//atgos11//AT1G35350//ABCB14//VIP5//AT2G16380//ATFH8//ATWRKY6//AtRLP19 GO:0048878 chemical homeostasis BP 0.0453590245619119 ATCLC-A//AT4G32190//AT3G19010//ATGLR1.1 GO:0006873 cellular ion homeostasis BP 0.0455191730956548 ATCLC-A//AT3G19010//ATGLR1.1 GO:0065008 regulation of biological quality BP 0.049317584922623 ATCLC-A//AT4G32190//AFB1//AT1G50950//AT3G19010//AT3G22520//ATGLR1.1//ABCB14//APC2//ATFH8 GO:0009725 response to hormone BP 0.0548306391019121 GSH2//ATKO1//OBF5//CYP71B5//IAA11//AFB1//iqd32//TGA3//ATGLR1.1//ABCB14//AJH2//AT1G17520//AT1G33050//ERD7//AtRLP19 GO:0043473 pigmentation BP 0.0551108359651658 AFB1//ABCB14 GO:0043476 pigment accumulation BP 0.0551108359651658 AFB1//ABCB14 GO:0043478 pigment accumulation in response to UV l... BP 0.0551108359651658 AFB1//ABCB14 GO:0043479 pigment accumulation in tissues in respo... BP 0.0551108359651658 AFB1//ABCB14 GO:0043480 pigment accumulation in tissues BP 0.0551108359651658 AFB1//ABCB14 GO:0043481 anthocyanin accumulation in tissues in r... BP 0.0551108359651658 AFB1//ABCB14 GO:0051649 establishment of localization in cell BP 0.0558342320771571 ATATG3//AT5G53220//AT5G53310//AT5G47180//ATSYP22//WIT1//ADF2//AT4G30600//GAMMA-SNAP//TGA3//AT3G19010//atgos11//VIP5//AtRLP19 GO:0055082 cellular chemical homeostasis BP 0.0569256698247608 ATCLC-A//AT3G19010//ATGLR1.1 GO:0016246 RNA interference BP 0.0589472876075978 AT3G22520//VIP5//APC2 GO:0009932 cell tip growth BP 0.0673673438035216 ATRAB1A//AFB1//ATFH8 GO:0035194 posttranscriptional gene silencing by RN... BP 0.0673673438035216 AT3G22520//VIP5//APC2 GO:0010564 regulation of cell cycle process BP 0.068815667826691 AJH2//APC2 GO:0019725 cellular homeostasis BP 0.0690276319364176 ATCLC-A//AT1G50950//AT3G19010//ATGLR1.1 GO:0010200 response to chitin BP 0.0704403505004429 AT5G53310//ATRAB1A//AT4G22820//TGA3//AT1G13195//ATFH8//ATWRKY6 GO:0016441 posttranscriptional gene silencing BP 0.0717730137543806 AT3G22520//VIP5//APC2 GO:0048581 negative regulation of post-embryonic de... BP 0.0724010204001901 VIP5//AJH2 GO:0051179 localization BP 0.0740574476934008 ATATG3//ATSGP1//AT5G53220//AT5G53310//ATRAB1A//AT5G47180//ATSYP22//ATCLC-A//WIT1//ADF2//AT4G30600//GAMMA-SNAP//TGA3//AT1G33970//AT3G19010//ATGLR1.1//atgos11//AT1G35350//ABCB14//VIP5//AT2G16380//ATFH8//ATWRKY6//AtRLP19 GO:0009826 unidimensional cell growth BP 0.0757777765899564 ATRAB1A//AFB1//APC2//ATFH8 GO:0031669 cellular response to nutrient levels BP 0.0757777765899564 ATCLC-A//AFB1//AT1G35350//ATWRKY6 GO:0070838 divalent metal ion transport BP 0.0763054999591224 ATCLC-A//AT3G19010//ATGLR1.1 GO:0072511 divalent inorganic cation transport BP 0.0763054999591224 ATCLC-A//AT3G19010//ATGLR1.1 GO:0071702 organic substance transport BP 0.0770893425072659 ATATG3//AT5G53220//AT5G53310//ATRAB1A//AT5G47180//ATSYP22//ADF2//AT4G30600//GAMMA-SNAP//TGA3//AT3G19010//atgos11//ATFH8//ATWRKY6//AtRLP19 GO:0009407 toxin catabolic process BP 0.0775159902239459 GSH2//APG9//ATFH8//ATWRKY6 GO:0090487 secondary metabolite catabolic process BP 0.0775159902239459 GSH2//APG9//ATFH8//ATWRKY6 GO:0050896 response to stimulus BP 0.0777822987161822 GSH2//ATKO1//ATSGP1//AT5G53310//ATRAB1A//AT5G47180//ATSYP22//AT5G43740//ATCLC-A//OBF5//AtPP2-A13//CYP71B5//AT4G32190//AT4G29520//IAA11//AT4G26620//AT4G22820//AFB1//iqd32//AT1G22180//TGA3//AT1G33970//AT1G66100//AT3G19010//AT3G22520//ATGLR1.1//AT1G35350//ABCB14//VIP5//LACS3//AJH2//ATXRCC1//AT2G43850//AT1G17520//AT1G33050//AT1G13195//APC2//APG9//AT1G77280//ATFH8//ATWRKY6//ERD7//AtRLP19 GO:0051641 cellular localization BP 0.0787629829830673 ATATG3//AT5G53220//AT5G53310//AT5G47180//ATSYP22//WIT1//ADF2//AT4G30600//GAMMA-SNAP//TGA3//AT3G19010//atgos11//VIP5//AtRLP19 GO:1902582 single-organism intracellular transport BP 0.0794776708862805 ATATG3//AT5G53220//AT5G53310//AT5G47180//ATSYP22//ADF2//AT4G30600//TGA3//AT3G19010//atgos11//VIP5//AtRLP19 GO:0009086 methionine biosynthetic process BP 0.0797479259692736 iqd32//AT3G22520 GO:0010583 response to cyclopentenone BP 0.0809619623808941 IAA11//ATFH8//ATWRKY6 GO:0010243 response to organonitrogen compound BP 0.0812835598066765 AT5G53310//ATRAB1A//AT4G22820//TGA3//AT1G13195//ATFH8//ATWRKY6 GO:0006555 methionine metabolic process BP 0.0835054268931121 iqd32//AT3G22520 GO:0042592 homeostatic process BP 0.0840754719296776 ATCLC-A//AT4G32190//AT1G50950//AT3G19010//ATGLR1.1 GO:0019220 regulation of phosphate metabolic proces... BP 0.0881726741340779 TGA3//ATXRCC1//AtRLP19 GO:0051174 regulation of phosphorus metabolic proce... BP 0.0881726741340779 TGA3//ATXRCC1//AtRLP19 GO:0014070 response to organic cyclic compound BP 0.0899700397242234 OBF5//IAA11//TGA3//AT3G22520//VIP5//AT1G17520//APC2//ATFH8//ATWRKY6//AtRLP19 GO:0031667 response to nutrient levels BP 0.0902391332021157 ATCLC-A//AFB1//AT1G35350//ATWRKY6 GO:0040029 regulation of gene expression, epigeneti... BP 0.0902391332021157 AT3G22520//VIP5//ATXRCC1//APC2 GO:0051241 negative regulation of multicellular org... BP 0.0911787007269724 VIP5//AJH2 GO:0009404 toxin metabolic process BP 0.0921346878016934 GSH2//APG9//ATFH8//ATWRKY6 GO:0009605 response to external stimulus BP 0.0928277032969473 ATSYP22//ATCLC-A//OBF5//AT4G29520//AFB1//TGA3//AT1G33970//AT3G22520//ATGLR1.1//AT1G35350//ABCB14//VIP5//LACS3//APC2//APG9//AT1G77280//ATWRKY6//AtRLP19 GO:1901700 response to oxygen-containing compound BP 0.0938307675131112 GSH2//ATKO1//AT5G53310//ATRAB1A//ATCLC-A//OBF5//AtPP2-A13//CYP71B5//AT4G32190//AT4G29520//AT4G22820//iqd32//TGA3//ATGLR1.1//AT1G17520//AT1G13195//ATFH8//ATWRKY6//ERD7//AtRLP19 GO:0009067 aspartate family amino acid biosynthetic... BP 0.0950906633785785 iqd32//AT3G22520 GO:0031668 cellular response to extracellular stimu... BP 0.0979354860401047 ATCLC-A//AFB1//AT1G35350//ATWRKY6 GO:0071496 cellular response to external stimulus BP 0.0999066739669132 ATCLC-A//AFB1//AT1G35350//ATWRKY6 GO:0006914 autophagy BP 0.103056005067392 ATATG3//APG9 GO:0008284 positive regulation of cell proliferatio... BP 0.103056005067392 AT5G14390//VIP5 GO:0033036 macromolecule localization BP 0.103240500734013 ATATG3//AT5G53220//AT5G53310//ATRAB1A//AT5G47180//ATSYP22//ADF2//AT4G30600//GAMMA-SNAP//TGA3//AT3G19010//atgos11//AtRLP19 GO:0055065 metal ion homeostasis BP 0.10710580353201 AT4G32190//ATGLR1.1 GO:0016043 cellular component organization BP 0.110618720691882 ATATG3//AT5G53220//ATRAB1A//AT5G47180//ATSYP22//ADF2//AT4G30600//AFB1//TGA3//AT3G19010//AT3G22520//atgos11//VIP5//AJH2//AT1G17520//AT1G04770//APC2//APG9//ATFH8//AtRLP19 GO:0010267 production of ta-siRNAs involved in RNA ... BP 0.111198028224959 AT3G22520//APC2 GO:0016570 histone modification BP 0.111334778398578 AT3G22520//VIP5//AJH2 GO:0009991 response to extracellular stimulus BP 0.114216318229347 ATCLC-A//AFB1//AT1G35350//ATWRKY6