GOID TERM ONTOLOGY pValue Genes GO:0010100 negative regulation of photomorphogenesi... BP 0.000191410183534771 DDB1B//SPA2//DDB1A//SPA4 GO:0006650 glycerophospholipid metabolic process BP 0.00031543608290219 PHR2//AT4G17790//AT1G28250//AT1G57540//FAD4//5PTASE2//AT4G03600//AT3G11530//AT1G63110//ATPIS//LSMT-L//IMPL1//AT1G22700 GO:0010099 regulation of photomorphogenesis BP 0.000496143509375648 DDB1B//SPA2//DDB1A//SPA4 GO:0046486 glycerolipid metabolic process BP 0.000562143104538653 PHR2//AT4G17790//AT1G28250//AT1G57540//FAD4//5PTASE2//AT4G03600//AT3G11530//AT1G63110//ATPIS//LSMT-L//IMPL1//AT1G22700 GO:2000030 regulation of response to red or far red... BP 0.000648036257272519 DDB1B//SPA2//DDB1A//SPA4 GO:0046474 glycerophospholipid biosynthetic process BP 0.0017797503546646 PHR2//AT4G17790//AT1G28250//AT1G57540//AT4G03600//AT3G11530//AT1G63110//ATPIS//LSMT-L//AT1G22700 GO:0046488 phosphatidylinositol metabolic process BP 0.00190076273535984 AT4G17790//AT1G28250//AT1G57540//5PTASE2//AT4G03600//AT3G11530//AT1G63110//ATPIS//IMPL1 GO:0009725 response to hormone BP 0.00256940277932216 ILL6//AT1G73480//AT5G64460//ATMYB96//MYC3//AT-HSFA4C//AT3G53390//AT3G53250//AKT2//5PTASE2//DFL2//AtERDL6//AT3G22060//AT1G75580//JAI3//AT3G09980//AT1G29500//AT1G76600//PYL9//ANAC002//AT1G76110//AtRLP17//ASIL1//UGT74E2//AT2G25070//AtMYB60//ATCSLA07//HHP3//COI1//AT2G26690 GO:0001101 response to acid chemical BP 0.00279544485564258 ILL6//AT4G17650//AT1G73480//ATMYB96//HRB1//MYC3//AT-HSFA4C//AHBP-1B//ABCG22//NLP7//AKT2//AT4G20860//5PTASE2//DFL2//AtERDL6//AT3G22060//JAI3//ATSAGT1//PYL9//ANAC002//AT1G76110//AtRLP17//UGT74E2//ATATG18H//AT2G25070//AtMYB60//ATCSLA07//COI1//AT2G26690 GO:0045017 glycerolipid biosynthetic process BP 0.00279638642806436 PHR2//AT4G17790//AT1G28250//AT1G57540//AT4G03600//AT3G11530//AT1G63110//ATPIS//LSMT-L//AT1G22700 GO:0009414 response to water deprivation BP 0.00319216229814809 AT4G17650//AT1G73480//ATMYB96//HRB1//AT-HSFA4C//ABCG22//NLP7//5PTASE2//ANAC002//UGT74E2//ATATG18H//AtMYB60 GO:0009415 response to water BP 0.00319216229814809 AT4G17650//AT1G73480//ATMYB96//HRB1//AT-HSFA4C//ABCG22//NLP7//5PTASE2//ANAC002//UGT74E2//ATATG18H//AtMYB60 GO:0006661 phosphatidylinositol biosynthetic proces... BP 0.00361259436149122 AT4G17790//AT1G28250//AT1G57540//AT4G03600//AT3G11530//AT1G63110//ATPIS GO:0006629 lipid metabolic process BP 0.00439484672084431 PHR2//AT4G17790//AT4G17650//AT1G28250//AT1G57540//AT5G16240//AT5G18640//ATDEF2//AT5G02580//LBD39//FAD4//ATSMO1-2//5PTASE2//AT4G03600//AT3G11530//AT1G63110//ATPIS//AT1G73650//KCS3//AtCXE5//AT2G01070//LSMT-L//AT1G23440//AtD27//KCS12//IMPL1//ATATG18H//AT1G22700//HHP3//ATCDF1//ATGA2OX3//AT2G41020 GO:0009719 response to endogenous stimulus BP 0.00457220520897234 ILL6//AT1G73480//AT5G64460//ATMYB96//MYC3//AT-HSFA4C//AT3G53390//AT3G53250//AKT2//AT4G20860//5PTASE2//DFL2//AtERDL6//AT3G22060//AT1G75580//JAI3//AT3G09980//AT1G29500//AT1G76600//AT1G19380//PYL9//ANAC002//AT1G76110//AtRLP17//ASIL1//UGT74E2//AT2G25070//AtMYB60//ATCSLA07//HHP3//COI1//AT2G26690 GO:0015824 proline transport BP 0.00554693342027582 AT4G17650//AT1G28250//ATPTR1//AT4G20860//AT4G10140 GO:0015804 neutral amino acid transport BP 0.00611019747637666 AT4G17650//AT1G28250//ATPTR1//AT4G20860//AT4G10140 GO:0048581 negative regulation of post-embryonic de... BP 0.00611019747637666 DDB1B//SPA2//DDB1A//SPA4//EPF2 GO:0051241 negative regulation of multicellular org... BP 0.00803964743328799 DDB1B//SPA2//DDB1A//SPA4//EPF2 GO:0009753 response to jasmonic acid BP 0.00839682064121424 ILL6//MYC3//AT-HSFA4C//5PTASE2//AtERDL6//JAI3//ANAC002//AT1G76110//AtMYB60//ATCSLA07//COI1//AT2G26690 GO:0048827 phyllome development BP 0.0102749618445757 AT4G15690//APE1//TCP17//EMS1//CRF6//AT3G53390//ATDGK7//DDB1B//AT4G02180//BUBR1//PKS2//ADT6//AT1G76110//AtRLP17//AT1G03020//AT2G04790//COI1 GO:0008610 lipid biosynthetic process BP 0.0118957233799405 PHR2//AT4G17790//AT4G17650//AT1G28250//AT1G57540//AT5G16240//ATDEF2//LBD39//FAD4//ATSMO1-2//AT4G03600//AT3G11530//AT1G63110//ATPIS//KCS3//AtCXE5//AT2G01070//LSMT-L//AtD27//KCS12//ATATG18H//AT1G22700//HHP3 GO:0002237 response to molecule of bacterial origin BP 0.014103811694048 Cand7//EMS1//AT3G22060//AtRLP17//COI1 GO:0048367 shoot system development BP 0.0144362573775533 AT4G15690//APE1//TCP17//EMS1//CRF6//AT3G53390//ATDGK7//DDB1B//DDB1A//AT4G02180//HAC12//BUBR1//REM39//PKS2//ADT6//AT1G76110//AtRLP17//EPF2//AtD27//ASIL1//AT1G03020//UGT74E2//AT2G04790//COI1 GO:0044255 cellular lipid metabolic process BP 0.0171001418846154 PHR2//AT4G17790//AT4G17650//AT1G28250//AT1G57540//AT5G16240//ATDEF2//AT5G02580//FAD4//ATSMO1-2//5PTASE2//AT4G03600//AT3G11530//AT1G63110//ATPIS//KCS3//LSMT-L//AT1G23440//AtD27//KCS12//IMPL1//ATATG18H//AT1G22700//ATCDF1//ATGA2OX3//AT2G41020 GO:0015849 organic acid transport BP 0.0181753794704318 AT4G17650//AT1G28250//AT5G39580//AT5G24430//ATPTR1//AT4G20860//AT4G10140//ANT1//ATPPT2 GO:0046942 carboxylic acid transport BP 0.0181753794704318 AT4G17650//AT1G28250//AT5G39580//AT5G24430//ATPTR1//AT4G20860//AT4G10140//ANT1//ATPPT2 GO:0006644 phospholipid metabolic process BP 0.0183984906957555 PHR2//AT4G17790//AT1G28250//AT1G57540//ATDEF2//FAD4//5PTASE2//AT4G03600//AT3G11530//AT1G63110//ATPIS//LSMT-L//IMPL1//AT1G22700 GO:0048443 stamen development BP 0.0226703156290365 AT4G15690//EMS1//AtRLP17//AT1G03020//COI1 GO:0048466 androecium development BP 0.0226703156290365 AT4G15690//EMS1//AtRLP17//AT1G03020//COI1 GO:0044248 cellular catabolic process BP 0.025004998024209 AT4G17650//NDC1//AT5G19420//AT-HSFA4C//AT5G08200//AT5G02580//ATPTR1//BGAL2//AT3G45900//Phox4//UKL4//ATTOM1//AT4G20860//ATMFDX2//BUBR1//AT3G24740//AT1G67580//CHI//AT1G23440//UGT74E2//APC2//IMPL1//AT1G67280//AT2G23940//ATCDF1//ATGA2OX3//AT2G41020//COI1 GO:0015711 organic anion transport BP 0.0271572491864775 AT4G17650//AT1G28250//AT5G39580//AT5G24430//ATPTR1//AT4G20860//AT4G10140//ANT1//ATPPT2 GO:0048585 negative regulation of response to stimu... BP 0.0271572491864775 ATDGK7//DDB1B//SPA2//DDB1A//SPA4//ANAC002//AT1G76110//ATCSLA07//COI1 GO:0071214 cellular response to abiotic stimulus BP 0.0274678826027467 AT4G17650//NDC1//HRB1//ATSIG5//UGT74E2//ATATG18H GO:0009737 response to abscisic acid BP 0.0276528546459546 AT1G73480//ATMYB96//AT-HSFA4C//AKT2//5PTASE2//DFL2//AT3G22060//PYL9//ANAC002//AtRLP17//UGT74E2//AT2G25070//AtMYB60 GO:0006865 amino acid transport BP 0.0292754227111148 AT4G17650//AT1G28250//AT5G39580//AT5G24430//ATPTR1//AT4G20860//AT4G10140//ANT1 GO:0046471 phosphatidylglycerol metabolic process BP 0.0338409188329986 PHR2//FAD4//LSMT-L//AT1G22700 GO:0010016 shoot system morphogenesis BP 0.0340523117674346 APE1//TCP17//EMS1//DDB1B//AT1G76110//AtRLP17//EPF2//AtD27//UGT74E2//AT2G04790//COI1 GO:0042538 hyperosmotic salinity response BP 0.0398399393348812 AT1G73480//AT-HSFA4C//5PTASE2//ANAC002//UGT74E2 GO:0010033 response to organic substance BP 0.0402991512352854 ILL6//AT1G73480//AT5G64460//ATMYB96//MYC3//AT-HSFA4C//Cand7//EMS1//AHBP-1B//AT3G53390//AT3G53250//Phox4//AKT2//AT4G20860//5PTASE2//DFL2//AtERDL6//AT3G22060//AT1G75580//JAI3//HYH//AT3G09980//AT1G29500//AT1G76600//AT1G73650//AT1G19380//PYL9//ANAC002//AT1G76110//AtRLP17//ASIL1//UGT74E2//APC2//AT2G25070//AtMYB60//ATCSLA07//HHP3//AT2G23940//COI1//AT2G26690 GO:0048653 anther development BP 0.0426923107371655 AT4G15690//EMS1//AT1G03020 GO:0006473 protein acetylation BP 0.0439615973767858 AHDP//HAC12 GO:0009416 response to light stimulus BP 0.0453547444558682 NDC1//HRB1//AT5G44090//ATSIG5//EFO2//AT3G62190//DDB1B//SPA2//DDB1A//DFL2//AGY1//AHDP//HYH//AT1G52320//AT1G73650//SPA4//KCS3//PKS2//ADT6//AtMYB60//AT2G41020//COI1 GO:0016126 sterol biosynthetic process BP 0.0461960741273331 LBD39//ATSMO1-2//AtCXE5//AT2G01070//HHP3 GO:0016125 sterol metabolic process BP 0.0484414172935192 LBD39//ATSMO1-2//AtCXE5//AT2G01070//HHP3 GO:0016998 cell wall macromolecule catabolic proces... BP 0.0504227183170056 AT5G08200//CHI GO:0009611 response to wounding BP 0.0505020262639798 ILL6//5PTASE2//JAI3//AT1G19380//ANAC002//COI1//AT2G26690 GO:0043543 protein acylation BP 0.0528966715814052 TOPP4//AT5G39580//AT5G24430//AT4G35240//AHDP//HAC12//AT4G10140//AT1G52320//AT1G76600//AT2G25070 GO:0051093 negative regulation of developmental pro... BP 0.0531228751755194 DDB1B//SPA2//DDB1A//SPA4//EPF2 GO:0019243 methylglyoxal catabolic process to D-lac... BP 0.0551740181849344 AT4G17650//ATMFDX2//IMPL1//AT1G67280 GO:0048731 system development BP 0.0565469965613682 AT4G15690//DG1//FRA1//AT-HSFA4C//APE1//Cand7//TCP17//EMS1//AT3G62190//CRF6//AT3G53390//ATDGK7//DDB1B//SPA2//DDB1A//AT4G02180//AHDP//MEE47//HAC12//BUBR1//REM39//AT1G67580//SPA4//PKS2//ADT6//AT1G76110//AtRLP17//EPF2//LSMT-L//AtD27//ASIL1//AT1G03020//UGT74E2//AT2G04790//ATSAE2//ATCSLA07//emb1513//AT2G41020//COI1 GO:0071705 nitrogen compound transport BP 0.0566267291764597 AT4G17650//AT1G28250//PHT4;5//AT5G39580//AT5G24430//ATPTR1//AT4G20860//AT4G08850//AT4G10140//ANT1//ATPPT2//AT1G53660//ATSAGT1//AT1G53380//AT2G26690 GO:0009438 methylglyoxal metabolic process BP 0.0582515507908374 AT4G17650//ATMFDX2//IMPL1//AT1G67280 GO:0042182 ketone catabolic process BP 0.0582515507908374 AT4G17650//ATMFDX2//IMPL1//AT1G67280 GO:0051596 methylglyoxal catabolic process BP 0.0582515507908374 AT4G17650//ATMFDX2//IMPL1//AT1G67280 GO:0010118 stomatal movement BP 0.0583607594083582 NLP7//AtMYB60//COI1 GO:0006857 oligopeptide transport BP 0.0614191674867375 ATPTR1//AT4G08850//AT1G53380//AT2G26690 GO:0015833 peptide transport BP 0.0614191674867375 ATPTR1//AT4G08850//AT1G53380//AT2G26690 GO:0032787 monocarboxylic acid metabolic process BP 0.0636013899423939 PHR2//ILL6//AT4G17650//AT5G16240//ATDEF2//AT5G02580//AT3G49160//FAD4//ATSMO1-2//ATMFDX2//AtERDL6//JAI3//ATSAGT1//KCS3//ANAC002//LSMT-L//AT1G23440//KCS12//IMPL1//AT1G22700//AT1G67280//ATCSLA07//ATCDF1//AT2G41020 GO:0008654 phospholipid biosynthetic process BP 0.0636654206150873 PHR2//AT4G17790//AT1G28250//AT1G57540//ATDEF2//AT4G03600//AT3G11530//AT1G63110//ATPIS//LSMT-L//AT1G22700 GO:0009314 response to radiation BP 0.0642430661098902 NDC1//HRB1//AT5G44090//ATSIG5//EFO2//AT3G62190//DDB1B//SPA2//DDB1A//DFL2//AGY1//AHDP//HYH//AT1G52320//AT1G73650//SPA4//KCS3//PKS2//ADT6//AtMYB60//AT2G41020//COI1 GO:0048825 cotyledon development BP 0.0670738157407097 CRF6//AT3G53390//DDB1B GO:0046185 aldehyde catabolic process BP 0.0680221429994308 AT4G17650//ATMFDX2//IMPL1//AT1G67280 GO:0048449 floral organ formation BP 0.0680221429994308 EMS1//DDB1A//AT4G02180//BUBR1 GO:0009639 response to red or far red light BP 0.0682395299642233 HRB1//AT5G44090//ATSIG5//DDB1B//SPA2//DDB1A//AT1G52320//SPA4//COI1 GO:1901700 response to oxygen-containing compound BP 0.0686131614673804 ILL6//AT4G17650//AT1G73480//ATMYB96//HRB1//MYC3//AT-HSFA4C//AHBP-1B//ABCG22//AT3G53390//NLP7//AKT2//AT4G20860//5PTASE2//DFL2//AtERDL6//AT3G22060//JAI3//AT1G76600//AT1G73650//ATSAGT1//AT1G19380//PYL9//ANAC002//AT1G76110//AtRLP17//UGT74E2//ATATG18H//AT2G25070//AtMYB60//ATCSLA07//HHP3//COI1//AT2G26690 GO:0009793 embryo development ending in seed dorman... BP 0.0696055244592662 DG1//CRF6//AT3G53390//DDB1B//MEE47//HAC12//LSMT-L//ASIL1//ATSAE2//ATCSLA07//emb1513 GO:0006089 lactate metabolic process BP 0.0714560494504251 AT4G17650//ATMFDX2//IMPL1//AT1G67280 GO:0042886 amide transport BP 0.0714560494504251 ATPTR1//AT4G08850//AT1G53380//AT2G26690 GO:0009790 embryo development BP 0.0721146483091074 DG1//CRF6//AT3G53390//DDB1B//MEE47//HAC12//LSMT-L//ASIL1//ATSAE2//ATCSLA07//emb1513//BPS2 GO:0048608 reproductive structure development BP 0.0729784713750896 AT4G15690//DG1//AT-HSFA4C//EMS1//AT3G62190//CRF6//AT3G53390//DDB1B//SPA2//DDB1A//AT4G02180//MEE47//HAC12//BUBR1//REM39//SPA4//ADT6//AtRLP17//LSMT-L//ASIL1//AT1G03020//ATSAE2//ATCSLA07//emb1513//AT2G41020//COI1 GO:0061458 reproductive system development BP 0.0729784713750896 AT4G15690//DG1//AT-HSFA4C//EMS1//AT3G62190//CRF6//AT3G53390//DDB1B//SPA2//DDB1A//AT4G02180//MEE47//HAC12//BUBR1//REM39//SPA4//ADT6//AtRLP17//LSMT-L//ASIL1//AT1G03020//ATSAE2//ATCSLA07//emb1513//AT2G41020//COI1 GO:0048366 leaf development BP 0.0735872633033306 APE1//TCP17//CRF6//AT3G53390//ATDGK7//DDB1B//PKS2//AT1G76110//AT2G04790 GO:0009056 catabolic process BP 0.0746951040627849 AT4G17650//NDC1//AT5G19420//AT-HSFA4C//AT5G08200//AT5G02580//ATPTR1//BGAL2//AT3G49160//AT3G45900//Phox4//UKL4//ATTOM1//AT4G20860//ATMFDX2//5PTASE2//BUBR1//AT3G24740//AT1G67580//CHI//AT1G23440//UGT74E2//APC2//IMPL1//AT1G67280//AT2G23940//ATCDF1//ATGA2OX3//AT2G41020//COI1 GO:0042631 cellular response to water deprivation BP 0.0763423963763685 AT4G17650//UGT74E2//ATATG18H GO:0071462 cellular response to water stimulus BP 0.0763423963763685 AT4G17650//UGT74E2//ATATG18H GO:0044712 single-organism catabolic process BP 0.0768563266706613 AT4G17650//NDC1//AT-HSFA4C//AT5G02580//ATPTR1//BGAL2//AT3G49160//AT3G45900//Phox4//AT4G20860//ATMFDX2//5PTASE2//BUBR1//AT1G23440//UGT74E2//IMPL1//AT1G67280//ATCDF1//ATGA2OX3//AT2G41020 GO:0006270 DNA replication initiation BP 0.0792262837329083 BUBR1//CYCB2;4 GO:0030258 lipid modification BP 0.0807412688738921 AT5G02580//ATSMO1-2//5PTASE2//AT1G23440//IMPL1//AT2G41020 GO:1901615 organic hydroxy compound metabolic proce... BP 0.0811208890430717 AT4G17650//ATSIG5//LBD39//ATSMO1-2//AKT2//ATMFDX2//5PTASE2//ATSAGT1//AT1G55960//AtCXE5//AT2G01070//IMPL1//AT1G67280//ATCSLA07//HHP3 GO:0006694 steroid biosynthetic process BP 0.0865274315074348 LBD39//ATSMO1-2//AtCXE5//AT2G01070//HHP3 GO:0046165 alcohol biosynthetic process BP 0.0882758801816762 ATSIG5//LBD39//ATSMO1-2//AKT2//AT1G55960//AtCXE5//AT2G01070//HHP3 GO:0006820 anion transport BP 0.0895172467324672 AT4G17650//AT1G28250//PHT4;5//AT5G39580//AT5G24430//ATPTR1//AT4G20860//AT4G10140//ANT1//ATPPT2//ATSAGT1 GO:0009694 jasmonic acid metabolic process BP 0.0899141611259393 ILL6//AtERDL6//JAI3//ANAC002 GO:0048580 regulation of post-embryonic development BP 0.0932429438076668 DDB1B//SPA2//DDB1A//AtERDL6//REM39//SPA4//EPF2//ASIL1//COI1 GO:0000956 nuclear-transcribed mRNA catabolic proce... BP 0.0938562149100276 AT5G19420//AT3G24740//AT1G67580//AT2G41020 GO:0006402 mRNA catabolic process BP 0.0938562149100276 AT5G19420//AT3G24740//AT1G67580//AT2G41020 GO:0046834 lipid phosphorylation BP 0.095132773963411 5PTASE2//IMPL1 GO:0046854 phosphatidylinositol phosphorylation BP 0.095132773963411 5PTASE2//IMPL1 GO:0097305 response to alcohol BP 0.0954940112957381 AT1G73480//ATMYB96//AT-HSFA4C//AKT2//5PTASE2//DFL2//AT3G22060//PYL9//ANAC002//AtRLP17//UGT74E2//AT2G25070//AtMYB60 GO:0071478 cellular response to radiation BP 0.096442514329172 NDC1//HRB1//ATSIG5 GO:0071482 cellular response to light stimulus BP 0.096442514329172 NDC1//HRB1//ATSIG5 GO:0048583 regulation of response to stimulus BP 0.0971731492788455 ILL6//ATDGK7//DDB1B//SPA2//AT4G08850//DDB1A//JAI3//AT1G73650//SPA4//ANAC002//AT1G76110//ATCSLA07//COI1 GO:0009733 response to auxin BP 0.0974088459734809 AT-HSFA4C//AT3G53250//5PTASE2//DFL2//AT1G75580//AT3G09980//AT1G29500//ASIL1 GO:0006497 protein lipidation BP 0.099688340594915 TOPP4//AT5G39580//AT5G24430//AT4G35240//AT4G10140//AT1G52320//AT1G63110//AT1G76600//AT2G25070 GO:0042157 lipoprotein metabolic process BP 0.099688340594915 TOPP4//AT5G39580//AT5G24430//AT4G35240//AT4G10140//AT1G52320//AT1G63110//AT1G76600//AT2G25070 GO:0042158 lipoprotein biosynthetic process BP 0.099688340594915 TOPP4//AT5G39580//AT5G24430//AT4G35240//AT4G10140//AT1G52320//AT1G63110//AT1G76600//AT2G25070 GO:0090626 plant epidermis morphogenesis BP 0.100943346670013 EMS1//DDB1A//AGY1//HAC12//AtRLP17//EPF2//COI1 GO:0006972 hyperosmotic response BP 0.10306367982339 AT1G73480//AT-HSFA4C//5PTASE2//ANAC002//UGT74E2 GO:0008202 steroid metabolic process BP 0.10306367982339 LBD39//ATSMO1-2//AtCXE5//AT2G01070//HHP3